RODEO2

Parameters

Run Time04:54PM on January 24, 2023
Version2.3.3
Gene Window+/-8 CDS
Peptide Range30-300 aa
Fetch Distance25bp
Peptide Type general
Annotation Legend
Appearance Accession/Name

Input Queries (click to navigate)

Results for WP_014150619.1 [Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014150627.1 1626503 1627253 + 249PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.80E-70
1.10E-54
6.20E-10
WP_050990265.1 1627485 1628772 + 428PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
8.90E-41
5.10E-16
3.80E-09
WP_014150625.1 1629996 1628979 - 338PF13377
PF00532
PF00356
PF12802
Peripla_BP_3
Peripla_BP_1
LacI
MarR_2
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Bacterial regulatory proteins, lacI family
MarR family
1.10E-31
2.40E-16
2.70E-15
7.80E-04
WP_014150624.1 1630472 1630682 + 69NO PFAM MATCH---
WP_014150623.1 1631714 1630751 - 320PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
1.90E-14
8.60E-14
4.60E-07
WP_014150622.1 1631865 1632510 + 214PF00440TetR_NBacterial regulatory proteins, tetR family1.00E-16
WP_157894773.1 1632839 1632407 - 143NO PFAM MATCH---
WP_014150620.1 1633890 1633143 - 248PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)1.10E-23
WP_014150619.1 1636517 1633910 - 868PF02624
PF07812
YcaO
TfuA
YcaO cyclodehydratase, ATP-ad Mg2+-binding
TfuA-like protein
5.70E-64
9.50E-34
WP_014627114.1 1637701 1636513 - 395PF08007JmjC_2JmjC domain9.20E-16
WP_014150617.1 1639251 1637697 - 517PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.40E-20
4.00E-06
1.10E-05
WP_014627115.1 1641069 1639284 - 594PF08007
PF13640
PF13621
JmjC_2
2OG-FeII_Oxy_3
Cupin_8
JmjC domain
2OG-Fe(II) oxygenase superfamily
Cupin-like domain
6.00E-19
1.20E-14
3.30E-05
WP_014150615.1 1641370 1641091 - 92NO PFAM MATCH---
WP_014150613.1 1642365 1641840 - 174PF00583Acetyltransf_1Acetyltransferase (GNAT) family1.60E-04
WP_018348499.1 1642565 1642739 + 58INFERRED GENE---
WP_014150612.1 1643681 1642904 - 258PF08241
PF13649
PF13847
PF08242
PF13489
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.30E-23
1.00E-20
3.50E-17
8.60E-14
2.20E-13
WP_014150611.1 1644715 1643848 - 288NO PFAM MATCH---

Results for WP_013943271.1 [Simkania negevensis Z] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013943261.1 952428 951789 - 212PF02245Pur_DNA_glycoMethylpurine-DNA glycosylase (MPG)1.70E-62
WP_013943262.1 954338 952316 - 673PF00773
PF08206
PF17876
PF00575
RNB
OB_RNB
CSD2
S1
RNB domain
Ribonuclease B OB domain
Cold shock domain
S1 RNA binding domain
2.40E-95
1.10E-12
1.90E-12
7.00E-06
WP_013943263.1 954412 955282 + 289NO PFAM MATCH---
WP_013943265.1 956585 955529 - 351PF00899
PF00581
ThiF
Rhodanese
ThiF family
Rhodanese-like domain
1.40E-56
8.40E-04
WP_013943266.1 956832 956586 - 81PF02597ThiSThiS family8.70E-15
WP_013943268.1 957282 956994 - 95PF07862Nif11Nif11 domain6.70E-12
WP_013943269.1 957698 957410 - 95PF07862Nif11Nif11 domain1.10E-12
WP_013943270.1 958061 957773 - 95PF07862Nif11Nif11 domain1.00E-11
WP_013943271.1 958201 959506 + 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.80E-66
WP_013943272.1 959505 960879 + 457PF07812TfuATfuA-like protein1.70E-43
WP_013943273.1 962855 960875 - 659PF00005
PF00664
PF13304
PF01926
PF13191
ABC_tran
ABC_membrane
AAA_21
MMR_HSR1
AAA_16
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
50S ribosome-binding GTPase
AAA ATPase domain
4.60E-26
2.80E-13
6.20E-05
4.00E-04
4.20E-04
WP_158307210.1 964927 962851 - 691PF03412
PF00005
PF00664
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
Papain-like cysteine protease AvrRpt2
6.70E-32
8.70E-22
9.70E-19
1.00E-04
WP_013943275.1 965726 964940 - 261PF13437
PF00364
PF00358
HlyD_3
Biotin_lipoyl
PTS_EIIA_1
HlyD family secretion protein
Biotin-requiring enzyme
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
3.00E-06
7.10E-06
4.80E-04
WP_013943276.1 966411 965802 - 202PF13419
PF00702
PF12710
HAD_2
Hydrolase
HAD
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
5.50E-15
3.10E-12
6.20E-04
WP_013943277.1 967340 966389 - 316PF02424ApbEApbE family1.60E-49
WP_013943278.1 968182 967330 - 283PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.50E-68
2.80E-41
WP_013943279.1 969015 968178 - 278PF00459Inositol_PInositol monophosphatase family9.70E-67

Results for WP_009409867.1 [Actinomyces sp. oral taxon 448 str. F0400] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009409859.1 334351 331846 - 834PF00912
PF00905
Transgly
Transpeptidase
Transglycosylase
Penicillin binding protein transpeptidase domain
1.30E-58
1.50E-32
WP_009409860.1 334779 338253 + 1157NO PFAM MATCH---
WP_034253499.1 339206 338381 - 274PF07739
PF13411
PF00376
PF09278
PF13384
TipAS
MerR_1
MerR
MerR-DNA-bind
HTH_23
TipAS antibiotic-recognition domain
MerR HTH family regulatory protein
MerR family regulatory protein
MerR, DNA binding
Homeodomain-like domain
2.10E-27
8.00E-15
1.10E-12
5.90E-09
3.90E-05
WP_009409862.1 340941 339639 - 433PF07690MFS_1Major Facilitator Superfamily7.90E-09
WP_009409863.1 342633 341121 - 503PF02065
PF01055
Melibiase
Glyco_hydro_31
Melibiase
Glycosyl hydrolases family 31
1.40E-16
2.40E-05
WP_009409864.1 343904 342713 - 396PF02826
PF00389
PF01262
PF03446
2-Hacid_dh_C
2-Hacid_dh
AlaDh_PNT_C
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alanine dehydrogenase/PNT, C-terminal domain
NAD binding domain of 6-phosphogluconate dehydrogenase
3.70E-35
3.60E-15
1.10E-05
3.00E-05
WP_009409865.1 345137 344054 - 360PF00266Aminotran_5Aminotransferase class-V3.30E-50
WP_172634819.1 346830 345567 - 420PF00881NitroreductaseNitroreductase family3.30E-08
WP_009409867.1 349027 346813 - 737PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-70
WP_009409868.1 349856 349031 - 274PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
2.90E-19
1.40E-17
9.30E-04
WP_009409869.1 350902 349912 - 329PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
5.50E-27
6.20E-14
1.00E-06
5.70E-06
1.10E-04
WP_009409870.1 351903 350898 - 334PF11175DUF2961Protein of unknown function (DUF2961)1.90E-08
WP_172634820.1 353054 351899 - 384PF00067p450Cytochrome P4507.60E-14
WP_009409872.1 353206 353065 - 46NO PFAM MATCH---
WP_009409873.1 353579 353252 - 108NO PFAM MATCH---
WP_009748247.1 355354 353800 - 517PF01743
PF12627
PF01966
PF13735
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Poly A polymerase head domain
Probable RNA and SrmB- binding site of polymerase A
HD domain
tRNA nucleotidyltransferase domain 2 putative
2.10E-29
5.00E-19
2.00E-12
7.70E-07
WP_034253505.1 355422 355932 + 169PF00293NUDIXNUDIX domain4.70E-22

Results for WP_005629824.1 [Haemophilus haemolyticus M19501] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032825017.1 9780 13221 + 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.50E-29
4.20E-26
1.90E-24
1.80E-20
1.80E-19
WP_032825013.1 14665 13273 - 463PF00595
PF13365
PF13180
PF02163
PF17820
PDZ
Trypsin_2
PDZ_2
Peptidase_M50
PDZ_6
PDZ domain
Trypsin-like peptidase domain
PDZ domain
Peptidase family M50
PDZ domain
8.10E-35
1.40E-32
4.20E-25
1.00E-22
3.20E-22
WP_005629810.1 14858 15749 + 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
3.40E-15
4.90E-12
WP_032825014.1 15750 17055 + 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
2.80E-13
2.80E-04
WP_032825015.1 20757 17112 - 1214PF03797
PF18883
Autotransporter
AC_1
Autotransporter beta-domain
Autochaperone Domain Type 1
6.50E-35
1.10E-06
WP_005629816.1 22054 21373 - 226PF02698DUF218DUF218 domain1.90E-14
WP_005629818.1 22211 23288 + 358PF00561Abhydrolase_1alpha/beta hydrolase fold1.70E-53
WP_005629820.1 25985 23342 - 880PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
3.60E-149
2.50E-78
WP_005629824.1 28331 26567 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-80
7.80E-63
WP_005629826.1 28944 28467 - 158NO PFAM MATCH---
WP_005663452.1 29175 29983 + 269INFERRED GENE---
WP_005629830.1 30034 30751 + 238PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
7.70E-15
3.60E-12
1.30E-06
WP_005629832.1 31661 30800 - 286PF03848
PF09313
PF13649
PF08241
PF13847
TehB
DUF1971
Methyltransf_25
Methyltransf_11
Methyltransf_31
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-115
3.70E-32
1.40E-11
2.00E-09
2.20E-09
WP_005629834.1 33822 31773 - 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
3.50E-166
5.70E-24
4.70E-15
2.40E-12
1.50E-10
WP_005629835.1 34071 34722 + 216PF08238
PF13432
PF13176
Sel1
TPR_16
TPR_7
Sel1 repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.70E-39
3.50E-11
5.30E-06
WP_005629837.1 34734 35100 + 121NO PFAM MATCH---
WP_005629839.1 35257 36370 + 370PF10609
PF01656
PF13614
PF09140
PF00142
ParA
CbiA
AAA_31
MipZ
Fer4_NifH
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
4.70E-101
1.90E-11
8.00E-10
3.10E-08
2.30E-07

Results for WP_005634722.1 [Haemophilus haemolyticus M21127] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005634706.1 25986 26649 + 220PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
4.30E-27
3.40E-05
WP_005634708.1 28062 26949 - 370PF10609
PF01656
PF13614
PF09140
PF00142
ParA
CbiA
AAA_31
MipZ
Fer4_NifH
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
7.00E-102
8.70E-12
2.80E-10
4.30E-08
1.90E-07
WP_005634710.1 28210 30259 + 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
2.10E-166
6.00E-24
5.90E-15
1.50E-12
2.00E-10
WP_005634712.1 30371 31232 + 286PF03848
PF09313
PF13649
PF13489
PF13847
TehB
DUF1971
Methyltransf_25
Methyltransf_23
Methyltransf_31
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.80E-115
5.00E-32
1.20E-11
1.40E-09
2.70E-09
WP_005634714.1 31992 31275 - 238PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.40E-14
6.00E-11
6.80E-07
WP_005634716.1 32024 32723 + 232PF08241
PF13649
Methyltransf_11
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
1.70E-07
3.40E-04
WP_005634718.1 33526 32719 - 268PF13649
PF08241
PF13847
PF05175
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
MTS
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase small domain
Methyltransferase domain
3.30E-10
6.50E-08
3.00E-07
2.50E-06
4.80E-06
WP_005634720.1 33756 34233 + 158NO PFAM MATCH---
WP_005634722.1 34358 36122 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-80
2.00E-63
WP_005634725.1 36692 39335 + 880PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
4.30E-149
2.60E-78
WP_005634726.1 40467 39390 - 358PF00561Abhydrolase_1alpha/beta hydrolase fold3.20E-54
WP_005634727.1 40624 41311 + 228PF02698DUF218DUF218 domain1.60E-14
WP_005634729.1 42619 41314 - 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
1.20E-12
1.70E-04
WP_005634731.1 43511 42620 - 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
6.00E-15
6.80E-12
WP_005634734.1 43713 45105 + 463PF00595
PF13365
PF13180
PF17820
PF02163
PDZ
Trypsin_2
PDZ_2
PDZ_6
Peptidase_M50
PDZ domain
Trypsin-like peptidase domain
PDZ domain
PDZ domain
Peptidase family M50
2.80E-32
2.80E-32
1.40E-25
1.70E-24
8.60E-22
WP_032828031.1 48601 45160 - 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
3.90E-29
4.30E-26
2.30E-24
9.40E-21
1.00E-19
WP_005634737.1 48877 48703 - 57PF17320DUF5363Family of unknown function (DUF5363)7.20E-23

Results for WP_006267405.1 [Streptococcus constellatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006267547.1 1932039 1931742 - 98PF05016ParE_toxinParE toxin of type II toxin-antitoxin system, parDE2.80E-06
WP_003024345.1 1932284 1932035 - 82PF04221RelBRelB antitoxin2.20E-08
WP_086558257.1 1933332 1934465 + 377INFERRED GENE---
WP_003028451.1 1934572 1935157 + 195INFERRED GENE---
WP_003078326.1 1935190 1935758 + 189INFERRED GENE---
WP_003036429.1 1936185 1936350 + 54NO PFAM MATCH---
WP_003036322.1 1936565 1937516 + 316PF00881NitroreductaseNitroreductase family8.30E-15
WP_003036332.1 1937512 1938580 + 355NO PFAM MATCH---
WP_006267405.1 1938584 1939943 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-40
WP_006267302.1 1939917 1940586 + 222PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.60E-09
WP_020997615.1 1940582 1941284 + 233PF19393DUF5968Family of unknown function (DUF5968)6.90E-21
WP_020997616.1 1941304 1942228 + 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
8.60E-33
3.00E-13
2.90E-04
WP_020997617.1 1942236 1943364 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
3.80E-21
7.70E-17
3.30E-12
WP_006267537.1 1943360 1944479 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
6.10E-42
3.10E-21
WP_008534445.1 1944608 1945848 + 413INFERRED GENE---
WP_006267612.1 1946103 1946991 + 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
9.70E-29
4.20E-04
WP_003025899.1 1947099 1947315 + 71NO PFAM MATCH---

Results for WP_009406807.1 [Actinomyces sp. oral taxon 175 str. F0384] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043538029.1 230492 228647 - 614PF00561
PF08386
Abhydrolase_1
Abhydrolase_4
alpha/beta hydrolase fold
TAP-like protein
2.50E-26
7.70E-21
WP_009406757.1 231815 230606 - 402PF01053
PF03841
Cys_Met_Meta_PP
SelA
Cys/Met metabolism PLP-dependent enzyme
L-seryl-tRNA selenium transferase
2.70E-119
1.00E-04
WP_009406755.1 233320 231943 - 458PF00155Aminotran_1_2Aminotransferase class I and II3.20E-44
WP_009406944.1 236401 233686 - 904PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.10E-51
8.90E-43
4.20E-12
5.00E-05
7.40E-04
WP_009406768.1 236781 236511 - 89PF00403HMAHeavy-metal-associated domain7.20E-13
WP_009406821.1 237147 236865 - 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor6.30E-32
WP_009406876.1 237292 238291 + 332NO PFAM MATCH---
WP_009406732.1 239068 238342 - 241PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
6.60E-23
1.00E-14
3.00E-05
WP_009406807.1 239332 240745 + 470PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-59
WP_009406931.1 240750 241524 + 257NO PFAM MATCH---
WP_009406741.1 241525 243358 + 610NO PFAM MATCH---
WP_009406863.1 243347 244085 + 245NO PFAM MATCH---
WP_020992058.1 244293 244497 + 67NO PFAM MATCH---
WP_050798032.1 244595 245831 + 411PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)1.70E-04
WP_009406730.1 245827 248470 + 880NO PFAM MATCH---
WP_009406781.1 248466 249720 + 417PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.00E-22

Results for WP_013610829.1 [Odoribacter splanchnicus DSM 20712] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013610839.1 145082 145286 + 67PF09413DUF2007Putative prokaryotic signal transducing protein2.20E-11
WP_013610838.1 145278 146094 + 271PF01148CTP_transf_1Cytidylyltransferase family8.50E-59
WP_013610837.1 146194 146851 + 218PF02666PS_DcarbxylasePhosphatidylserine decarboxylase4.70E-28
WP_013610836.1 146930 147746 + 271PF02548
PF13714
Pantoate_transf
PEP_mutase
Ketopantoate hydroxymethyltransferase
Phosphoenolpyruvate phosphomutase
4.20E-113
3.00E-05
WP_013610835.1 147871 148564 + 230PF00849PseudoU_synth_2RNA pseudouridylate synthase2.40E-29
WP_013610833.1 150053 148802 - 416PF13189
PF07690
Cytidylate_kin2
MFS_1
Cytidylate kinase-like family
Major Facilitator Superfamily
2.10E-48
1.60E-18
WP_181998482.1 150097 150463 + 121PF10543ORF6NORF6N domain2.60E-04
WP_013610832.1 153416 150524 - 963PF04851
PF00270
PF00176
ResIII
DEAD
SNF2-rel_dom
Type III restriction enzyme, res subunit
DEAD/DEAH box helicase
SNF2-related domain
8.80E-16
2.60E-08
2.30E-04
WP_013610831.1 154306 153394 - 303PF07751Abi_2Abi-like protein4.30E-47
WP_013610829.1 155432 157256 + 607PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.40E-53
WP_118104491.1 157242 159552 + 769PF13715
PF14905
PF13620
PF02369
CarbopepD_reg_2
OMP_b-brl_3
CarboxypepD_reg
Big_1
CarboxypepD_reg-like domain
Outer membrane protein beta-barrel family
Carboxypeptidase regulatory-like domain
Bacterial Ig-like domain (group 1)
7.70E-18
1.50E-16
5.90E-12
3.90E-04
WP_013610827.1 159573 160761 + 395PF03412
PF00664
Peptidase_C39
ABC_membrane
Peptidase C39 family
ABC transporter transmembrane region
3.00E-31
5.70E-21
LK432_RS00700 160772 160979 + 69INFERRED GENE---
WP_229032362.1 161183 160964 - 72PF13102Phage_int_SAM_5Phage integrase SAM-like domain5.10E-10
WP_083813711.1 161585 161234 - 116PF17293Arm-DNA-bind_5Arm DNA-binding domain1.30E-04
WP_013610825.1 162550 163111 + 186PF08281
PF04545
PF04542
PF00196
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma-70, region 4
Sigma-70, region 4
Sigma-70 region 2
Bacterial regulatory proteins, luxR family
5.30E-16
3.60E-10
1.50E-09
2.90E-05
WP_013610824.1 163176 164256 + 359PF16344
PF04773
DUF4974
FecR
Domain of unknown function (DUF4974)
FecR protein
1.00E-13
1.80E-13
WP_013610823.1 164367 167730 + 1120PF13715
PF00593
PF07715
PF13620
PF07660
CarbopepD_reg_2
TonB_dep_Rec
Plug
CarboxypepD_reg
STN
CarboxypepD_reg-like domain
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Carboxypeptidase regulatory-like domain
Secretin and TonB N terminus short domain
4.10E-20
7.60E-19
8.20E-15
1.60E-12
1.50E-05

Results for WP_014005402.1 [Collimonas fungivorans Ter331] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014005395.1 1662166 1659292 - 957PF00311
PF14010
PEPcase
PEPcase_2
Phosphoenolpyruvate carboxylase
Phosphoenolpyruvate carboxylase
0.00E+00
8.20E-04
WP_050808729.1 1662400 1663282 + 293PF01379
PF03900
Porphobil_deam
Porphobil_deamC
Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobilinogen deaminase, C-terminal domain
1.30E-75
3.10E-15
WP_148264780.1 1663281 1664082 + 266PF02602HEM4Uroporphyrinogen-III synthase HemD3.30E-32
WP_014005398.1 1664078 1665260 + 393PF04375HemXHemX, putative uroporphyrinogen-III C-methyltransferase3.50E-43
WP_014005399.1 1665264 1666461 + 398PF07219HemY_NHemY protein N-terminus6.00E-29
WP_014005400.1 1666649 1667972 + 440PF01595
PF03471
PF00571
CNNM
CorC_HlyC
CBS
Cyclin M transmembrane N-terminal domain
Transporter associated domain
CBS domain
5.90E-51
2.10E-15
1.60E-08
WP_014005401.1 1668983 1669544 + 186PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
7.30E-33
2.90E-08
WP_041741448.1 1670005 1669627 - 125PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily3.30E-06
WP_014005402.1 1672288 1670065 - 740PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.10E-73
2.10E-71
1.40E-07
WP_014005403.1 1673241 1672575 - 221PF02798
PF13417
PF13410
GST_N
GST_N_3
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
1.70E-10
2.20E-08
2.90E-04
WP_050808505.1 1674324 1673367 - 318NO PFAM MATCH---
WP_014005405.1 1675214 1674431 - 260PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
9.30E-51
2.00E-50
2.80E-10
WP_014005406.1 1676009 1675268 - 246PF06314ADCAcetoacetate decarboxylase (ADC)1.80E-77
WP_014005407.1 1676572 1677901 + 442PF00375SDFSodium:dicarboxylate symporter family1.00E-109
WP_014005408.1 1679721 1678041 - 559PF00009
PF16658
PF03144
PF01926
PF14492
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Elongation factor Tu GTP binding domain
Class II release factor RF3, C-terminal domain
Elongation factor Tu domain 2
50S ribosome-binding GTPase
Elongation Factor G, domain III
1.60E-50
6.30E-42
3.10E-10
3.00E-06
4.40E-05
WP_041743100.1 1680000 1684029 + 1342PF11898
PF04408
PF07717
PF00271
PF00270
DUF3418
HA2
OB_NTP_bind
Helicase_C
DEAD
Domain of unknown function (DUF3418)
Helicase associated domain (HA2)
Oligonucleotide/oligosaccharide-binding (OB)-fold
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
1.70E-212
1.20E-18
9.70E-14
2.40E-11
8.60E-08
WP_014005410.1 1684139 1684706 + 188PF00692dUTPasedUTPase1.60E-07

Results for WP_006080210.1 [Shewanella baltica BA175] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006080218.1 4227400 4225633 - 588PF09423
PF16655
PF16656
PhoD
PhoD_N
Pur_ac_phosph_N
PhoD-like phosphatase
PhoD-like phosphatase, N-terminal domain
Purple acid Phosphatase, N-terminal domain
1.20E-125
1.90E-32
2.10E-04
WP_006080217.1 4227655 4228081 + 141PF00571CBSCBS domain1.70E-21
WP_006080216.1 4228180 4228786 + 201PF14096DUF4274Domain of unknown function (DUF4274)1.00E-14
WP_006080215.1 4230175 4228813 - 453PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
1.40E-46
9.20E-07
WP_006080214.1 4230645 4231563 + 305PF07859
PF20434
PF00135
PF10340
Abhydrolase_3
BD-FAE
COesterase
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
Steryl acetyl hydrolase
1.90E-65
3.70E-20
4.00E-12
3.80E-10
WP_006080213.1 4232426 4231646 - 259PF01790LGTProlipoprotein diacylglyceryl transferase3.30E-67
WP_006080212.1 4233125 4232654 - 156PF06172Cupin_5Cupin superfamily (DUF985)4.00E-44
WP_006080211.1 4233504 4234413 + 302PF00990GGDEFDiguanylate cyclase, GGDEF domain3.00E-42
WP_006080210.1 4236782 4234592 - 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.70E-72
1.90E-70
3.10E-09
WP_006080209.1 4237272 4237041 - 76NO PFAM MATCH---
WP_006080208.1 4237581 4239246 + 554PF00015
PF17200
PF08269
PF00672
PF17201
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Single Cache domain 2
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
9.00E-42
1.10E-28
6.50E-28
3.00E-14
8.90E-12
WP_006080207.1 4239448 4239628 + 59PF20027DUF6435Family of unknown function (DUF6435)5.50E-28
WP_006080206.1 4240076 4239659 - 138PF12614RRF_GIRibosome recycling factor1.90E-59
WP_006080205.1 4240394 4240640 + 81PF11730DUF3297Protein of unknown function (DUF3297)9.70E-35
WP_237709415.1 4240800 4241370 + 189PF10881DUF2726Protein of unknown function (DUF2726)7.20E-41
WP_006080201.1 4241758 4242730 + 323PF00990GGDEFDiguanylate cyclase, GGDEF domain1.20E-36
WP_237709416.1 4243976 4242965 - 336PF01738
PF02129
PF08840
PF06500
PF12146
DLH
Peptidase_S15
BAAT_C
FrsA-like
Hydrolase_4
Dienelactone hydrolase family
X-Pro dipeptidyl-peptidase (S15 family)
BAAT / Acyl-CoA thioester hydrolase C terminal
Esterase FrsA-like
Serine aminopeptidase, S33
2.40E-07
1.00E-04
1.60E-04
3.30E-04
8.20E-04

Results for WP_014488740.1 [Brachyspira intermedia PWS/A] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041177439.1 2646167 2645162 - 334NO PFAM MATCH---
WP_041177440.1 2647266 2646603 - 220NO PFAM MATCH---
WP_014488734.1 2647918 2647522 - 131NO PFAM MATCH---
WP_014488735.1 2648271 2647941 - 109PF03551
PF04458
PadR
DUF505
Transcriptional regulator PadR-like family
Protein of unknown function (DUF505)
2.10E-21
9.90E-04
WP_014488736.1 2649447 2648754 - 230PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
6.40E-18
1.40E-12
WP_014488737.1 2650486 2649793 - 230PF00005
PF13304
PF02463
PF13175
PF13476
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
8.20E-31
3.30E-15
1.10E-09
1.20E-07
2.70E-07
WP_041177442.1 2651753 2651012 - 246PF19393DUF5968Family of unknown function (DUF5968)1.60E-05
WP_041177443.1 2652412 2651749 - 220PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like6.80E-10
WP_014488740.1 2653733 2652386 - 448PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-39
WP_014488741.1 2655039 2653944 - 364NO PFAM MATCH---
WP_014488742.1 2656106 2655092 - 337PF00881NitroreductaseNitroreductase family4.80E-13
WP_014488743.1 2656441 2657506 + 354PF02812
PF00208
PF03721
ELFV_dehydrog_N
ELFV_dehydrog
UDPG_MGDP_dh_N
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
5.90E-26
1.10E-17
3.90E-05
WP_083818266.1 2658036 2658702 + 221NO PFAM MATCH---
WP_014488745.1 2658839 2659247 + 135PF04304DUF454Protein of unknown function (DUF454)6.40E-34
WP_041177444.1 2659263 2659869 + 201NO PFAM MATCH---
WP_014488747.1 2659982 2660456 + 157PF00440TetR_NBacterial regulatory proteins, tetR family4.00E-07
WP_014488748.1 2660485 2662234 + 582PF00664
PF00005
PF02463
ABC_membrane
ABC_tran
SMC_N
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
6.80E-31
3.00E-28
9.80E-06

Results for WP_013226216.1 [Amycolatopsis mediterranei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013226208.1 5059696 5060683 + 328PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.20E-14
WP_013226209.1 5060679 5061510 + 276PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.80E-19
WP_013226210.1 5061515 5062973 + 485PF00933Glyco_hydro_3Glycosyl hydrolase family 3 N terminal domain2.20E-65
WP_013226211.1 5063085 5066244 + 1052PF00515
PF07719
PF13414
PF13181
PF13424
TPR_1
TPR_2
TPR_11
TPR_8
TPR_12
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.30E-76
9.00E-67
2.40E-52
7.00E-47
9.60E-33
WP_013226212.1 5066336 5067095 + 252PF08239SH3_3Bacterial SH3 domain2.80E-05
WP_013226213.1 5068211 5067152 - 352PF09994DUF2235Uncharacterized alpha/beta hydrolase domain (DUF2235)1.20E-80
WP_013226214.1 5068809 5068275 - 177PF00583
PF13508
PF13527
PF13673
PF08445
Acetyltransf_1
Acetyltransf_7
Acetyltransf_9
Acetyltransf_10
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
8.30E-09
2.10E-06
4.40E-06
6.90E-06
9.10E-04
WP_013226215.1 5070034 5068801 - 410PF07690
PF13347
PF12832
MFS_1
MFS_2
MFS_1_like
Major Facilitator Superfamily
MFS/sugar transport protein
MFS_1 like family
3.70E-31
3.00E-11
1.60E-05
WP_013226216.1 5072222 5070044 - 725PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.90E-59
WP_014467096.1 5072467 5072314 - 50PF00132HexapepBacterial transferase hexapeptide (six repeats)3.40E-04
WP_013226217.1 5073050 5072699 - 116PF04237YjbRYjbR2.80E-07
WP_013226218.1 5074541 5073110 - 476PF09362DUF1996Domain of unknown function (DUF1996)8.80E-24
ISP_RS23405 5075222 5075534 + 104INFERRED GENE---
WP_014467098.1 5076158 5075540 - 205PF04545
PF08281
PF04542
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma-70, region 4
Sigma-70, region 4
Sigma-70 region 2
1.20E-09
1.60E-09
9.30E-09
WP_013226220.1 5076399 5076807 + 135PF12900Pyridox_ox_2Pyridoxamine 5'-phosphate oxidase2.60E-13
WP_013226221.1 5076973 5078476 + 500PF13185
PF01590
PF13492
PF07730
PF13581
GAF_2
GAF
GAF_3
HisKA_3
HATPase_c_2
GAF domain
GAF domain
GAF domain
Histidine kinase
Histidine kinase-like ATPase domain
1.40E-23
1.10E-13
4.40E-12
2.10E-11
6.40E-07
WP_013226222.1 5078472 5079132 + 219PF00072
PF00196
PF08281
PF13936
Response_reg
GerE
Sigma70_r4_2
HTH_38
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Helix-turn-helix domain
6.30E-22
7.30E-19
4.00E-07
7.60E-05

Results for WP_013227744.1 [Amycolatopsis mediterranei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013227736.1 6869251 6868258 - 330PF02424ApbEApbE family5.70E-54
WP_013227737.1 6869502 6869247 - 84NO PFAM MATCH---
WP_013227738.1 6869724 6870600 + 291PF04185PhosphoesterasePhosphoesterase family1.00E-32
WP_013227739.1 6870646 6871858 + 403PF07690
PF12832
PF00083
MFS_1
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
MFS_1 like family
Sugar (and other) transporter
1.70E-29
2.60E-05
3.30E-04
WP_013227740.1 6871854 6872835 + 326PF07676PD40WD40-like Beta Propeller Repeat2.30E-04
WP_013227741.1 6873170 6873572 + 133NO PFAM MATCH---
WP_013227742.1 6874885 6873580 - 434PF07519
PF10605
PF00326
Tannase
3HBOH
Peptidase_S9
Tannase and feruloyl esterase
3HB-oligomer hydrolase (3HBOH)
Prolyl oligopeptidase family
1.50E-09
7.40E-07
1.00E-04
WP_013227743.1 6875100 6876303 + 400PF10503
PF00326
Esterase_PHB
Peptidase_S9
Esterase PHB depolymerase
Prolyl oligopeptidase family
4.70E-39
2.40E-06
WP_013227744.1 6878604 6876420 - 727PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-103
WP_013227745.1 6878840 6878600 - 79NO PFAM MATCH---
WP_014467382.1 6879129 6878955 - 57NO PFAM MATCH---
WP_013227746.1 6881136 6879282 - 617PF13185
PF13556
PF17853
PF01590
PF13492
GAF_2
HTH_30
GGDEF_2
GAF
GAF_3
GAF domain
PucR C-terminal helix-turn-helix domain
GGDEF-like domain
GAF domain
GAF domain
7.00E-17
1.20E-16
2.20E-15
4.40E-15
8.20E-10
WP_013227747.1 6882564 6881196 - 455PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
2.70E-36
4.40E-27
WP_013227748.1 6883350 6882600 - 249PF13561
PF00106
PF01370
PF00107
PF08659
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
KR domain
4.90E-50
7.40E-46
9.50E-07
3.60E-05
8.90E-05
WP_071831515.1 6883588 6883399 - 62PF04149DUF397Domain of unknown function (DUF397)3.90E-17
WP_230468441.1 6884430 6883584 - 281PF19054
PF13560
PF01381
PF12844
DUF5753
HTH_31
HTH_3
HTH_19
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
1.50E-47
3.60E-09
1.70E-08
6.00E-05
WP_014467383.1 6884516 6884957 + 146NO PFAM MATCH---

Results for WP_013228654.1 back to top

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Couldn't process WP_013228654.1 Genbank filestream. May be corrupt.

Results for WP_013999497.1 [Methanococcus maripaludis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013999491.1 1121004 1121181 + 58NO PFAM MATCH---
WP_011170993.1 1121194 1121464 + 89PF04066MrpF_PhaFMultiple resistance and pH regulation protein F (MrpF / PhaF)3.50E-05
WP_119721041.1 1122147 1121499 - 215PF01936NYNNYN domain8.70E-25
WP_119721042.1 1123018 1122223 - 264PF01975SurESurvival protein SurE3.90E-53
WP_013999493.1 1123351 1124146 + 264PF13412
PF13545
HTH_24
HTH_Crp_2
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
2.60E-13
1.10E-04
WP_119721043.1 1125068 1124186 - 293PF02754CCGCysteine-rich domain1.10E-38
WP_013999495.1 1125658 1125103 - 184PF13183
PF13237
PF13187
PF13534
PF12838
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_7
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.40E-10
1.80E-09
5.40E-09
8.00E-09
4.70E-06
WP_119721044.1 1125789 1126095 + 101PF02594DUF167Uncharacterised ACR, YggU family COG18728.30E-21
WP_013999497.1 1126117 1127320 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-79
WP_119721045.1 1127390 1128359 + 322PF08349
PF04463
DUF1722
2-thiour_desulf
Protein of unknown function (DUF1722)
2-thiouracil desulfurase
6.80E-36
7.20E-32
WP_119721046.1 1128583 1130035 + 483PF07992
PF01266
PF03486
PF01134
PF01494
Pyr_redox_2
DAO
HI0933_like
GIDA
FAD_binding_3
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Glucose inhibited division protein A
FAD binding domain
7.30E-19
9.20E-12
2.00E-10
5.00E-09
2.10E-07
WP_119721047.1 1130045 1131476 + 476PF01406
PF09334
PF09190
PF01921
PF00133
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
tRNA synthetases class I (C) catalytic domain
tRNA synthetases class I (M)
DALR domain
tRNA synthetases class I (K)
tRNA synthetases class I (I, L, M and V)
1.00E-136
1.00E-16
4.40E-11
3.70E-09
3.20E-07
WP_119721048.1 1131491 1132100 + 202PF01205
PF09186
UPF0029
DUF1949
Uncharacterized protein family UPF0029
Domain of unknown function (DUF1949)
6.70E-29
3.40E-10
WP_119721049.1 1132130 1133972 + 613PF05362Lon_CLon protease (S16) C-terminal proteolytic domain1.10E-10
WP_119721050.1 1134055 1135600 + 514PF00682
PF08502
HMGL-like
LeuA_dimer
HMGL-like
LeuA allosteric (dimerisation) domain
5.30E-91
2.00E-31
WP_119721051.1 1136295 1135731 - 187PF01928CYTHCYTH domain7.00E-34
WP_011171009.1 1136726 1136291 - 144PF02082
PF01022
PF13291
PF03444
PF08279
Rrf2
HTH_5
ACT_4
HrcA_DNA-bdg
HTH_11
Iron-dependent Transcriptional regulator
Bacterial regulatory protein, arsR family
ACT domain
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH domain
3.80E-08
2.50E-05
5.70E-05
2.30E-04
2.60E-04

Results for WP_014486303.1 [Borreliella afzelii PKo] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_157859699.1 1659 1140 - 172PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.30E-08
WP_014486303.1 3061 1735 - 441PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-39
WP_014486304.1 4123 3076 - 348NO PFAM MATCH---
WP_014486305.1 5056 4135 - 306PF00881NitroreductaseNitroreductase family2.30E-12
WP_044052720.1 6390 5391 - 332NO PFAM MATCH---
WP_014486308.1 7442 6407 - 344NO PFAM MATCH---
WP_014486309.1 8187 7455 - 243NO PFAM MATCH---
WP_044052721.1 9406 8179 - 408PF02687FtsXFtsX-like permease family4.60E-17
WP_014486311.1 10085 9398 - 228PF00005
PF02463
ABC_tran
SMC_N
ABC transporter
RecF/RecN/SMC N terminal domain
7.00E-26
9.70E-04
WP_014486312.1 10893 10110 - 260NO PFAM MATCH---

Results for WP_014040449.1 [Haloarcula hispanica N601] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 1569141 1568994 - 48NO PFAM MATCH---
WP_004961169.1 1569200 1569920 + 239NO PFAM MATCH---
WP_014040443.1 1570406 1569923 - 160PF00293NUDIXNUDIX domain1.00E-12
WP_014040444.1 1571300 1570406 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
4.50E-67
2.10E-35
WP_023843272.1 1571966 1571375 - 196NO PFAM MATCH---
WP_014040446.1 1573297 1572049 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
1.80E-150
8.10E-08
WP_014040447.1 1573450 1575538 + 695NO PFAM MATCH---
WP_008309020.1 1575909 1576728 + 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_014040449.1 1576759 1578469 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_014040450.1 1579660 1578511 - 382PF01889DUF63Membrane protein of unknown function DUF634.50E-35
WP_014040451.1 1580602 1579762 - 279PF00459Inositol_PInositol monophosphatase family3.30E-47
WP_004518094.1 1580875 1580674 - 66NO PFAM MATCH---
WP_144443754.1 1580994 1581174 + 59NO PFAM MATCH---
WP_014040453.1 1581769 1582984 + 404PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
2.70E-22
2.10E-04
WP_014040454.1 1583999 1583012 - 328PF18884TSP3_bacBacterial TSP3 repeat1.40E-11
WP_014040455.1 1584225 1585671 + 481PF01882DUF58Protein of unknown function DUF581.50E-20
WP_014040456.1 1585667 1586168 + 166NO PFAM MATCH---

Results for WP_014556444.1 [Haloquadratum walsbyi C23] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_269448453.1 2180491 2180356 - 44NO PFAM MATCH---
WP_014556438.1 2182196 2181173 - 340PF14258
PF09822
DUF4350
ABC_transp_aux
Domain of unknown function (DUF4350)
ABC-type uncharacterized transport system
4.10E-11
2.70E-09
WP_014556439.1 2183175 2182188 - 328PF01343Peptidase_S49Peptidase family S494.30E-18
WP_014556440.1 2183342 2183891 + 182PF13419
PF00702
HAD_2
Hydrolase
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.80E-13
1.60E-08
WP_014556441.1 2184106 2184538 + 143NO PFAM MATCH---
WP_014556442.1 2185645 2184709 - 311PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.20E-66
2.20E-37
WP_011572011.1 2187044 2185796 - 415PF00464
PF00155
PF01212
PF01041
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
1.40E-148
8.30E-11
1.10E-05
4.50E-04
WP_014556443.1 2187429 2188254 + 274PF19138DUF5821Family of unknown function (DUF5821)4.40E-88
WP_014556444.1 2188377 2190171 + 597PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-52
WP_014556445.1 2191410 2190270 - 379PF01889DUF63Membrane protein of unknown function DUF631.20E-37
WP_014556446.1 2192450 2191640 - 269PF00459Inositol_PInositol monophosphatase family1.60E-54
WP_014556447.1 2192877 2192436 - 146PF00582UspUniversal stress protein family1.80E-29
WP_011572017.1 2193017 2193377 + 119PF01910Thiamine_BPThiamine-binding protein1.50E-22
WP_014556448.1 2193630 2194569 + 312PF02289MCHCyclohydrolase (MCH)5.80E-122
WP_014556449.1 2196077 2194730 - 448PF01435
PF16491
Peptidase_M48
Peptidase_M48_N
Peptidase family M48
CAAX prenyl protease N-terminal, five membrane helices
8.70E-39
2.60E-34
WP_011572020.1 2198061 2196432 - 542PF00009
PF03144
PF03143
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
Elongation factor Tu GTP binding domain
Elongation factor Tu domain 2
Elongation factor Tu C-terminal domain
5.70E-35
1.80E-11
5.40E-09
WP_014556450.1 2199249 2198730 - 172PF00226DnaJDnaJ domain1.40E-15

Results for WP_003968624.1 [Streptomyces sp. SID4928] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003968613.1 5358660 5358366 - 97PF12840
PF01022
PF12802
PF13412
HTH_20
HTH_5
MarR_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Winged helix-turn-helix DNA-binding
3.50E-20
2.20E-09
1.90E-08
8.40E-07
WP_003968614.1 5358767 5359262 + 164NO PFAM MATCH---
WP_202464988.1 5360822 5359316 - 501PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.20E-48
1.00E-13
2.30E-11
WP_007450496.1 5361613 5362402 + 263INFERRED GENE---
WP_003968618.1 5362398 5364984 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.70E-37
7.00E-22
WP_003968619.1 5365308 5365557 + 82NO PFAM MATCH---
WP_003968620.1 5365754 5367683 + 642PF03704
PF00486
PF13191
PF00931
BTAD
Trans_reg_C
AAA_16
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
NB-ARC domain
7.30E-35
9.90E-09
4.40E-06
2.60E-05
WP_003968622.1 5367687 5370021 + 777PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-12
WP_003968624.1 5370010 5372107 + 698PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-80
WP_003968626.1 5372151 5373738 + 528PF00881NitroreductaseNitroreductase family3.20E-20
WP_050984555.1 5373890 5376572 + 893PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-48
WP_003968629.1 5376571 5377618 + 348PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.70E-94
WP_202476635.1 5377656 5378757 + 366PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.00E-04
8.90E-04
WP_003968631.1 5378782 5379748 + 321PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.80E-29
1.30E-15
2.00E-05
1.10E-04
WP_003968632.1 5379807 5380563 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.50E-29
6.00E-22
WP_003968633.1 5380559 5382653 + 697PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-79
WP_003968635.1 5382910 5382733 - 58NO PFAM MATCH---

Results for WP_003968633.1 [Streptomyces sp. SID4928] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003968622.1 5367687 5370021 + 777PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-12
WP_003968624.1 5370010 5372107 + 698PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-80
WP_003968626.1 5372151 5373738 + 528PF00881NitroreductaseNitroreductase family3.20E-20
WP_050984555.1 5373890 5376572 + 893PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-48
WP_003968629.1 5376571 5377618 + 348PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.70E-94
WP_202476635.1 5377656 5378757 + 366PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.00E-04
8.90E-04
WP_003968631.1 5378782 5379748 + 321PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.80E-29
1.30E-15
2.00E-05
1.10E-04
WP_003968632.1 5379807 5380563 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.50E-29
6.00E-22
WP_003968633.1 5380559 5382653 + 697PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-79
WP_003968635.1 5382910 5382733 - 58NO PFAM MATCH---
WP_003968636.1 5383093 5384431 + 445PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
3.50E-22
9.30E-08
WP_003968637.1 5384427 5384694 + 88NO PFAM MATCH---
WP_003968638.1 5385842 5384849 - 330PF00196GerEBacterial regulatory proteins, luxR family3.70E-04
WP_003968639.1 5386505 5390039 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
5.40E-32
2.50E-24
3.60E-21
7.90E-17
2.80E-15
WP_237533996.1 5390424 5390112 - 103PF13581
PF02518
HATPase_c_2
HATPase_c
Histidine kinase-like ATPase domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
1.10E-13
4.00E-05
WP_003968642.1 5390649 5391189 + 179PF07702UTRAUTRA domain4.00E-25
WP_003968644.1 5391185 5391968 + 260PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
7.20E-18
5.70E-15

Results for WP_009302344.1 [Desulfovibrio sp. 6_1_46AFAA] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009302339.1 586280 587339 + 352PF04055
PF13186
Radical_SAM
SPASM
Radical SAM superfamily
Iron-sulfur cluster-binding domain
3.70E-12
2.50E-08
WP_009302340.1 587974 587335 - 212PF03167UDGUracil DNA glycosylase superfamily5.10E-04
WP_232221557.1 588799 588040 - 252NO PFAM MATCH---
WP_086558226.1 589120 589599 + 159INFERRED GENE---
WP_086558226.1 589751 590417 + 222INFERRED GENE---
WP_009302342.1 591706 590467 - 412PF13023
PF12917
HD_3
YfbR-like
HD domain
5'-deoxynucleotidase YfbR-like
1.10E-40
5.70E-11
WP_009302343.1 592020 592455 + 144PF00572Ribosomal_L13Ribosomal protein L139.10E-50
WP_008684943.1 592467 592860 + 130PF00380Ribosomal_S9Ribosomal protein S9/S166.40E-45
WP_009302344.1 592980 594795 + 604PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-44
WP_009302345.1 594959 596108 + 382PF13458
PF01094
PF13433
PF04348
Peripla_BP_6
ANF_receptor
Peripla_BP_5
LppC
Periplasmic binding protein
Receptor family ligand binding region
Periplasmic binding protein domain
LppC putative lipoprotein
1.80E-60
1.50E-22
2.90E-17
4.40E-04
WP_008684938.1 596249 597143 + 297PF02653BPD_transp_2Branched-chain amino acid transport system / permease component4.50E-43
WP_009302346.1 597142 598180 + 345PF02653BPD_transp_2Branched-chain amino acid transport system / permease component1.90E-45
WP_008684933.1 598176 598995 + 272PF00005
PF12399
PF13304
ABC_tran
BCA_ABC_TP_C
AAA_21
ABC transporter
Branched-chain amino acid ATP-binding cassette transporter
AAA domain, putative AbiEii toxin, Type IV TA system
3.80E-28
6.40E-11
7.60E-08
WP_008684931.1 598987 599710 + 240PF00005
PF13304
PF12399
ABC_tran
AAA_21
BCA_ABC_TP_C
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Branched-chain amino acid ATP-binding cassette transporter
2.00E-27
2.40E-13
9.40E-05
WP_008684929.1 599915 600128 + 70PF20095DUF6485Domain of unknown function (DUF6485)3.80E-26
WP_009302347.1 600212 601142 + 309NO PFAM MATCH---
WP_009302348.1 601570 604228 + 885PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
1.30E-45
1.60E-35

Results for WP_009368104.1 [Bilophila sp. 4_1_30] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009368098.1 60896 59825 - 356PF00534
PF13692
PF13439
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
3.20E-21
3.70E-20
1.80E-19
4.70E-13
WP_009368099.1 61735 61168 - 188NO PFAM MATCH---
WP_005027847.1 61894 62272 + 125NO PFAM MATCH---
WP_009368100.1 63122 62573 - 182PF00877
PF05257
NLPC_P60
CHAP
NlpC/P60 family
CHAP domain
1.00E-24
6.90E-04
WP_009368101.1 63918 63105 - 270PF19842YqeCYqeC protein6.10E-40
WP_009368102.1 65780 63920 - 619PF01134
PF13932
PF12831
PF07992
PF01266
GIDA
GIDA_C
FAD_oxidored
Pyr_redox_2
DAO
Glucose inhibited division protein A
tRNA modifying enzyme MnmG/GidA C-terminal domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
8.00E-154
3.20E-67
1.40E-06
4.80E-06
2.00E-04
WP_009368103.1 67415 66188 - 408PF01546
PF07687
PF04389
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase family M20/M25/M40
Peptidase dimerisation domain
Peptidase family M28
2.50E-25
5.50E-18
1.00E-06
WP_005027852.1 67829 67556 - 90NO PFAM MATCH---
WP_009368104.1 68069 69791 + 573PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-43
WP_009368105.1 70406 71513 + 368PF01738
PF03403
DLH
PAF-AH_p_II
Dienelactone hydrolase family
Platelet-activating factor acetylhydrolase, isoform II
5.10E-05
5.60E-04
WP_009368106.1 73787 71708 - 692PF00009
PF03764
PF14492
PF00679
PF03144
GTP_EFTU
EFG_IV
EFG_III
EFG_C
GTP_EFTU_D2
Elongation factor Tu GTP binding domain
Elongation factor G, domain IV
Elongation Factor G, domain III
Elongation factor G C-terminus
Elongation factor Tu domain 2
1.20E-70
4.10E-48
5.60E-33
1.50E-32
3.10E-16
WP_005027858.1 74270 73799 - 156PF00177Ribosomal_S7Ribosomal protein S7p/S5e7.40E-64
WP_005027859.1 74864 74489 - 124PF00164Ribosom_S12_S23Ribosomal protein S12/S232.40E-44
WP_009368108.1 75352 76534 + 393PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
4.90E-119
1.60E-18
WP_009368109.1 77745 76908 - 278PF03471
PF00571
CorC_HlyC
CBS
Transporter associated domain
CBS domain
3.20E-18
8.70E-15
WP_009368110.1 79076 77960 - 371PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
6.90E-44
7.10E-29
1.70E-17
WP_009368111.1 80343 79176 - 388PF12679
PF12698
PF01061
PF12730
ABC2_membrane_2
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
6.70E-48
6.60E-38
2.20E-22
1.30E-09

Results for WP_009012965.1 [Prevotella histicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_219542235.1 0 710 + 235PF07592DDE_Tnp_ISAZ013Rhodopirellula transposase DDE domain2.40E-73
WP_009012969.1 3043 877 - 721PF13715
PF13620
PF07715
CarbopepD_reg_2
CarboxypepD_reg
Plug
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
TonB-dependent Receptor Plug Domain
7.80E-15
1.40E-05
1.10E-04
WP_008449717.1 3891 3108 - 260NO PFAM MATCH---
WP_008449642.1 4470 3936 - 177PF02163Peptidase_M50Peptidase family M505.30E-05
WP_008449671.1 5189 4466 - 240PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.80E-11
1.70E-04
WP_232214123.1 6203 5336 - 288PF00005
PF13304
PF02463
PF13476
ABC_tran
AAA_21
SMC_N
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
2.80E-26
4.60E-12
6.50E-05
2.10E-04
WP_009012966.1 7071 6186 - 294PF00881NitroreductaseNitroreductase family1.20E-15
WP_009012965.1 8371 7075 - 431PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-57
WP_008449695.1 9343 8383 - 319NO PFAM MATCH---
WP_009012962.1 9765 9945 + 59NO PFAM MATCH---
WP_008449654.1 10097 11375 + 425PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.60E-14
3.70E-06
1.00E-05
WP_009012961.1 11383 13657 + 757PF14905
PF13620
PF13715
PF00593
OMP_b-brl_3
CarboxypepD_reg
CarbopepD_reg_2
TonB_dep_Rec
Outer membrane protein beta-barrel family
Carboxypeptidase regulatory-like domain
CarboxypepD_reg-like domain
TonB dependent receptor
3.30E-17
1.00E-12
1.10E-12
2.80E-04
WP_008449702.1 13657 15847 + 729PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
1.40E-34
1.70E-30
9.40E-27
6.40E-07
3.50E-05
WP_008449756.1 15864 16344 + 159NO PFAM MATCH---
WP_009012960.1 16935 16518 - 138NO PFAM MATCH---
WP_219524209.1 18227 16931 - 431PF00589
PF13102
PF17293
Phage_integrase
Phage_int_SAM_5
Arm-DNA-bind_5
Phage integrase family
Phage integrase SAM-like domain
Arm DNA-binding domain
1.10E-21
2.60E-15
1.20E-07

Results for WP_007527652.1 [Desulfovibrio sp. A2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007527645.1 57647 57344 - 100PF01910Thiamine_BPThiamine-binding protein5.70E-28
WP_043610128.1 59614 57832 - 593PF01973MptE-like6-hydroxymethylpterin diphosphokinase MptE-like4.30E-26
WP_007527647.1 63001 59806 - 1064NO PFAM MATCH---
WP_007527648.1 63159 63984 + 274PF00881
PF00037
PF13237
PF13187
PF12837
Nitroreductase
Fer4
Fer4_10
Fer4_9
Fer4_6
Nitroreductase family
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
3.30E-27
4.20E-08
1.00E-07
2.50E-07
1.20E-06
WP_258165028.1 65064 64470 - 197PF00015MCPsignalMethyl-accepting chemotaxis protein (MCP) signalling domain3.80E-43
DA2_RS18885 65352 66816 + 488INFERRED GENE---
WP_007527650.1 67037 67580 + 180NO PFAM MATCH---
WP_007527651.1 69272 67664 - 535PF01019G_glu_transpeptGamma-glutamyltranspeptidase4.50E-121
WP_007527652.1 71253 69477 - 591PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-40

Results for WP_007495061.1 [Streptomyces zinciresistens K42] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007495049.1 22020 23241 + 406PF00108
PF02803
PF00109
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase, N-terminal domain
Thiolase, C-terminal domain
Beta-ketoacyl synthase, N-terminal domain
7.80E-61
1.50E-48
2.20E-04
WP_043730349.1 23526 24345 + 272NO PFAM MATCH---
WP_007495051.1 24704 24392 - 103NO PFAM MATCH---
WP_007495052.1 24806 25037 + 76PF14117DUF4287Domain of unknown function (DUF4287)6.60E-23
WP_007495053.1 26030 25133 - 298PF12811
PF01027
BaxI_1
Bax1-I
Bax inhibitor 1 like
Inhibitor of apoptosis-promoting Bax1
1.40E-78
1.10E-19
WP_006375257.1 26235 27410 + 391INFERRED GENE---
WP_043730351.1 28928 27896 - 343PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
8.40E-50
1.40E-46
1.40E-20
3.90E-11
5.50E-08
WP_007495059.1 29743 28843 - 299PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.40E-13
2.90E-12
7.90E-10
3.90E-07
9.30E-07
WP_007495061.1 30881 29735 - 381PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-59
WP_007495063.1 32059 30877 - 393PF07812TfuATfuA-like protein1.70E-38
WP_007495067.1 32813 32405 - 135PF13581HATPase_c_2Histidine kinase-like ATPase domain1.30E-05
WP_078508558.1 34516 33265 - 416PF13560
PF01381
HTH_31
HTH_3
Helix-turn-helix domain
Helix-turn-helix
1.20E-11
1.00E-04
WP_007495071.1 35348 36119 + 256PF00005
PF02463
PF13555
PF13304
PF13476
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_23
ABC transporter
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
2.20E-29
4.50E-06
1.80E-05
1.40E-04
3.00E-04
WP_007495073.1 36118 38653 + 844PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.20E-39
2.30E-18
WP_007495075.1 40033 38722 - 436PF02353
PF13649
PF08241
PF13489
PF08242
CMAS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Mycolic acid cyclopropane synthetase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.00E-91
2.10E-16
2.20E-15
3.60E-12
3.50E-11
WP_078508559.1 41701 40312 - 462PF07992
PF00070
PF01266
PF13454
PF13241
Pyr_redox_2
Pyr_redox
DAO
NAD_binding_9
NAD_binding_7
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
FAD-NAD(P)-binding
Putative NAD(P)-binding
1.70E-44
2.30E-10
5.10E-08
7.40E-05
4.40E-04
WP_007495079.1 42271 42472 + 66NO PFAM MATCH---

Results for WP_007527950.1 [Desulfovibrio sp. A2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007527930.1 55771 56377 + 201PF02075RuvCCrossover junction endodeoxyribonuclease RuvC6.00E-44
WP_138978127.1 58284 56568 - 571PF00990
PF02743
PF17203
PF17853
GGDEF
dCache_1
sCache_3_2
GGDEF_2
Diguanylate cyclase, GGDEF domain
Cache domain
Single cache domain 3
GGDEF-like domain
5.40E-44
3.20E-08
3.20E-05
7.50E-04
WP_007527935.1 58485 59094 + 202PF01330
PF14520
PF07499
RuvA_N
HHH_5
RuvA_C
RuvA N terminal domain
Helix-hairpin-helix domain
RuvA, C-terminal domain
2.90E-17
1.80E-13
1.80E-08
WP_050804132.1 59093 60086 + 330PF05496
PF17864
PF05491
PF00004
PF07728
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Holliday junction DNA helicase RuvB P-loop domain
RuvB AAA lid domain
RuvB C-terminal winged helix domain
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
1.70E-76
5.30E-30
2.30E-26
5.70E-18
5.10E-07
WP_007527939.1 60223 60958 + 244PF02511Thy1Thymidylate synthase complementing protein3.50E-64
WP_043610223.1 61515 62994 + 492PF00308
PF08299
PF11638
PF01695
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
Bacterial dnaA protein
Bacterial dnaA protein helix-turn-helix
DnaA N-terminal domain
IstB-like ATP binding protein
8.80E-59
4.30E-21
4.90E-13
4.00E-05
WP_007527946.1 63267 63822 + 184PF07883
PF13560
PF01381
PF12844
PF05899
Cupin_2
HTH_31
HTH_3
HTH_19
Cupin_3
Cupin domain
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
EutQ-like cupin domain
1.80E-16
2.90E-10
1.40E-09
2.50E-06
1.90E-04
WP_007527948.1 63966 65640 + 557PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
3.30E-84
4.50E-23
WP_007527950.1 67695 65940 - 584PF02624
PF07719
PF00515
PF13181
PF13432
YcaO
TPR_2
TPR_1
TPR_8
TPR_16
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.10E-53
4.10E-11
2.10E-10
4.60E-08
2.20E-07
WP_007527952.1 68612 67814 - 265PF10294
PF05175
PF06325
PF13649
PF13847
Methyltransf_16
MTS
PrmA
Methyltransf_25
Methyltransf_31
Lysine methyltransferase
Methyltransferase small domain
Ribosomal protein L11 methyltransferase (PrmA)
Methyltransferase domain
Methyltransferase domain
6.50E-15
1.20E-08
8.40E-07
1.50E-06
7.10E-06
WP_192808523.1 69542 68876 - 221PF13673Acetyltransf_10Acetyltransferase (GNAT) domain5.30E-05
WP_007527956.1 70270 70672 + 133PF03625DUF302Domain of unknown function DUF3021.00E-13
WP_007527960.1 71596 71959 + 120PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger1.40E-14
WP_007527964.1 72264 74127 + 620PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
3.70E-13
8.10E-09
WP_083818226.1 74295 75681 + 461PF08668
PF00563
HDOD
EAL
HDOD domain
EAL domain
2.10E-11
4.30E-05
WP_007527968.1 75683 77063 + 459PF03313
PF03315
SDH_alpha
SDH_beta
Serine dehydratase alpha chain
Serine dehydratase beta chain
3.50E-77
8.30E-42
WP_007527970.1 77085 77748 + 220NO PFAM MATCH---

Results for WP_014474677.1 [Arcobacter sp. L] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014474669.1 2005980 2005113 - 288PF01263Aldose_epimAldose 1-epimerase8.90E-30
WP_014474670.1 2006738 2005976 - 253PF00905TranspeptidasePenicillin binding protein transpeptidase domain1.30E-34
WP_014474671.1 2008168 2006821 - 448PF00270
PF00271
PF13245
DEAD
Helicase_C
AAA_19
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
AAA domain
1.10E-52
3.90E-30
7.40E-04
WP_014474672.1 2008429 2010100 + 556PF13175
PF13304
PF00005
AAA_15
AAA_21
ABC_tran
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
1.10E-14
1.10E-08
2.50E-07
WP_014474673.1 2010096 2011056 + 319NO PFAM MATCH---
WP_014474674.1 2012294 2011070 - 407PF07804
PF13657
HipA_C
Couple_hipA
HipA-like C-terminal domain
HipA N-terminal domain
3.30E-43
3.00E-15
WP_014474675.1 2012599 2012290 - 102PF01381
PF00157
HTH_3
Pou
Helix-turn-helix
Pou domain - N-terminal to homeobox domain
6.90E-08
1.20E-05
WP_014474676.1 2013102 2012673 - 142NO PFAM MATCH---
WP_014474677.1 2013241 2014867 + 541PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-61
6.90E-05
WP_014474678.1 2014909 2015287 + 125PF03625DUF302Domain of unknown function DUF3023.60E-14
WP_014474679.1 2015411 2015888 + 158PF11026DUF2721Protein of unknown function (DUF2721)2.10E-32
WP_014474680.1 2016076 2015929 - 48NO PFAM MATCH---
WP_014474681.1 2018500 2016262 - 745PF08376
PF00015
NIT
MCPsignal
Nitrate and nitrite sensing
Methyl-accepting chemotaxis protein (MCP) signalling domain
6.60E-46
5.10E-37
WP_014474682.1 2018685 2019507 + 273PF00075
PF13456
RNase_H
RVT_3
RNase H
Reverse transcriptase-like
2.60E-35
1.50E-06
WP_014474683.1 2019566 2020535 + 322PF00682HMGL-likeHMGL-like1.10E-24
WP_014474684.1 2020863 2020557 - 101PF08803ydhRPutative mono-oxygenase ydhR9.40E-41
WP_014474685.1 2021321 2020910 - 136PF07681
PF04224
DoxX
DUF417
DoxX
Protein of unknown function, DUF417
3.60E-05
6.90E-05

Results for WP_014051223.1 [halophilic archaeon DL31] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014051214.1 980661 980514 - 48NO PFAM MATCH---
WP_014051216.1 980842 981598 + 251PF08271TF_Zn_RibbonTFIIB zinc-binding9.70E-05
WP_014051217.1 981822 982269 + 148PF00582UspUniversal stress protein family2.90E-13
WP_014051218.1 983265 982278 - 328PF02882
PF00763
PF01262
THF_DHG_CYH_C
THF_DHG_CYH
AlaDh_PNT_C
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Alanine dehydrogenase/PNT, C-terminal domain
5.60E-63
9.80E-38
6.20E-04
WP_014051219.1 984698 983450 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
5.00E-147
2.50E-10
WP_014051220.1 984788 986828 + 679NO PFAM MATCH---
WP_014051221.1 987030 986835 - 64NO PFAM MATCH---
WP_014051222.1 987194 988016 + 273PF19138DUF5821Family of unknown function (DUF5821)3.10E-98
WP_014051223.1 988064 989765 + 566PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-51
WP_014051224.1 990793 989773 - 339PF01979
PF00962
PF07969
Amidohydro_1
A_deaminase
Amidohydro_3
Amidohydrolase family
Adenosine deaminase
Amidohydrolase family
1.50E-28
3.00E-07
3.10E-07
WP_014051225.1 991503 993306 + 600PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
1.10E-74
2.20E-43
3.60E-33
3.20E-18
1.40E-09
WP_014051226.1 993806 993359 - 148PF03684UPF0179Uncharacterised protein family (UPF0179)1.90E-46
WP_095532192.1 994259 993878 - 126PF19137DUF5820Family of unknown function (DUF5820)3.90E-55
WP_014051228.1 994368 994512 + 47NO PFAM MATCH---
WP_014051230.1 995021 996350 + 442PF00202Aminotran_3Aminotransferase class-III6.50E-72
WP_014051231.1 996342 997305 + 320PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
5.40E-49
5.60E-09
WP_014051232.1 998509 997330 - 392PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
7.40E-33
3.70E-20

Results for WP_014045623.1 [Streptomyces sp. SID1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014045615.1 1917914 1919390 + 491PF07690
PF13347
MFS_1
MFS_2
Major Facilitator Superfamily
MFS/sugar transport protein
2.70E-54
3.40E-07
WP_019992714.1 1919432 1920014 + 193PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
4.40E-23
2.80E-10
WP_014045617.1 1920106 1921009 + 300PF13641
PF13632
PF00535
Glyco_tranf_2_3
Glyco_trans_2_3
Glycos_transf_2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 2
5.50E-08
1.40E-05
1.60E-04
WP_014045618.1 1922917 1921030 - 628PF00069
PF07714
PF00497
PF14531
PF17667
Pkinase
PK_Tyr_Ser-Thr
SBP_bac_3
Kinase-like
Pkinase_fungal
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Bacterial extracellular solute-binding proteins, family 3
Kinase-like
Fungal protein kinase
9.00E-52
2.40E-32
1.60E-31
2.80E-08
1.70E-06
WP_014045619.1 1923518 1923029 - 162PF13508
PF00583
PF13673
PF08445
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
FR47-like protein
3.20E-10
3.30E-10
8.80E-09
2.40E-04
WP_014045620.1 1923711 1924284 + 190PF00072
PF00196
PF08281
PF13384
Response_reg
GerE
Sigma70_r4_2
HTH_23
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
6.30E-20
1.80E-16
4.10E-04
8.90E-04
WP_019992712.1 1925445 1924284 - 386PF07730HisKA_3Histidine kinase1.40E-14
WP_014045622.1 1927027 1925584 - 480PF00881NitroreductaseNitroreductase family9.80E-12
WP_014045623.1 1929340 1927057 - 760PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-96
WP_014045624.1 1929542 1929389 - 50NO PFAM MATCH---
WP_014045625.1 1930955 1929668 - 428PF00009
PF01926
GTP_EFTU
MMR_HSR1
Elongation factor Tu GTP binding domain
50S ribosome-binding GTPase
1.60E-38
4.40E-07
WP_014045626.1 1931899 1930957 - 313PF01507PAPS_reductPhosphoadenosine phosphosulfate reductase family2.20E-45
WP_202434688.1 1932408 1931895 - 170PF01583
PF13671
PF08433
APS_kinase
AAA_33
KTI12
Adenylylsulphate kinase
AAA domain
Chromatin associated protein KTI12
1.60E-52
6.40E-09
3.80E-06
WP_014045628.1 1934369 1932497 - 623PF01546
PF00696
Peptidase_M20
AA_kinase
Peptidase family M20/M25/M40
Amino acid kinase family
2.30E-19
9.90E-18
WP_093565435.1 1935174 1934415 - 252PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
2.90E-42
5.40E-34
WP_014045630.1 1936280 1935182 - 365PF13469
PF00685
Sulfotransfer_3
Sulfotransfer_1
Sulfotransferase family
Sulfotransferase domain
7.10E-13
5.50E-07
WP_014045631.1 1937201 1936310 - 296NO PFAM MATCH---

Results for WP_014060947.1 [Streptomyces violaceusniger Tu 4113] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014060939.1 9403293 9403659 + 121NO PFAM MATCH---
WP_014060940.1 9403773 9404415 + 213PF09250Prim-PolBifunctional DNA primase/polymerase, N-terminal5.00E-06
WP_014060941.1 9405902 9404645 - 418NO PFAM MATCH---
WP_014060942.1 9406786 9405994 - 263PF13561
PF00106
PF08659
PF13460
PF01370
adh_short_C2
adh_short
KR
NAD_binding_10
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD(P)H-binding
NAD dependent epimerase/dehydratase family
1.70E-30
4.20E-29
6.50E-05
4.60E-04
6.80E-04
WP_014060943.1 9407840 9406889 - 316PF12833
PF00165
PF01965
HTH_18
HTH_AraC
DJ-1_PfpI
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
DJ-1/PfpI family
2.50E-25
1.10E-22
1.10E-16
WP_014060944.1 9409169 9407933 - 411PF01494
PF00890
PF12831
PF07992
PF04820
FAD_binding_3
FAD_binding_2
FAD_oxidored
Pyr_redox_2
Trp_halogenase
FAD binding domain
FAD binding domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Tryptophan halogenase
2.70E-40
2.00E-06
5.30E-06
2.00E-05
4.80E-05
WP_014060945.1 9410265 9409440 - 274PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
2.00E-46
6.20E-08
WP_014060946.1 9410446 9410713 + 88NO PFAM MATCH---
WP_014060947.1 9410720 9413081 + 786PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-89
WP_251982821.1 9413219 9414476 + 418PF07730HisKA_3Histidine kinase2.30E-15
WP_014060949.1 9415138 9414532 - 201PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.00E-22
5.50E-18
5.80E-04
WP_043237203.1 9415831 9415279 - 183PF00501AMP-bindingAMP-binding enzyme1.10E-05
WP_014060950.1 9417346 9416080 - 421NO PFAM MATCH---
WP_043237205.1 9417991 9419635 + 547PF00563
PF00990
PF08448
EAL
GGDEF
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS fold
1.50E-68
1.50E-39
1.30E-04
WP_014060952.1 9420914 9419786 - 375PF00296Bac_luciferaseLuciferase-like monooxygenase1.30E-40
WP_014060953.1 9423026 9421151 - 624PF04185PhosphoesterasePhosphoesterase family2.90E-79
WP_014060954.1 9424403 9423182 - 406PF04261Dyp_peroxDyp-type peroxidase family2.20E-105

Results for WP_005556591.1 [Aggregatibacter actinomycetemcomitans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005556570.1 8746 9634 + 295PF03895
PF19220
YadA_anchor
Crescentin
YadA-like membrane anchor domain
Crescentin protein
1.10E-13
8.30E-04
WP_032996587.1 11407 9736 - 556PF00005
PF13304
PF12848
PF02463
PF01926
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
MMR_HSR1
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
2.30E-59
1.90E-16
3.40E-16
2.90E-07
3.30E-06
WP_005556576.1 11785 12451 + 221PF06226DUF1007Protein of unknown function (DUF1007)2.80E-50
WP_005556578.1 12466 13501 + 344PF03824NicOHigh-affinity nickel-transport protein9.20E-47
WP_005556580.1 14111 16154 + 680PF17757
PF12344
PF00271
PF04851
PF02151
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
UvrB interaction domain
Ultra-violet resistance protein B
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
UvrB/uvrC motif
2.80E-34
5.50E-21
6.60E-19
1.60E-11
3.30E-08
WP_005556582.1 16380 17451 + 356PF01389
PF00691
PF13505
OmpA_membrane
OmpA
OMP_b-brl
OmpA-like transmembrane domain
OmpA family
Outer membrane protein beta-barrel domain
2.30E-62
7.40E-25
6.80E-18
WP_005556584.1 19034 17651 - 460PF13365
PF00595
PF13180
PF17820
PF02163
Trypsin_2
PDZ
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
PDZ domain
PDZ domain
PDZ domain
Peptidase family M50
9.40E-31
4.90E-30
6.40E-24
1.50E-23
1.90E-23
WP_061885791.1 19642 19231 - 136PF06295DUF1043Protein of unknown function (DUF1043)1.50E-43
WP_005556591.1 21577 19813 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.00E-77
8.20E-65
WP_005556593.1 22873 21667 - 401PF20511PMI_typeI_catPhosphomannose isomerase type I, catalytic domain2.50E-30
WP_005556596.1 23048 23387 + 112PF07411DUF1508Domain of unknown function (DUF1508)3.80E-40
WP_005556599.1 23578 25072 + 497PF02378
PF00367
PTS_EIIC
PTS_EIIB
Phosphotransferase system, EIIC
phosphotransferase system, EIIB
5.70E-78
5.00E-13
WP_005556600.1 25831 25132 - 232PF08241
PF13489
PF13847
PF13649
Methyltransf_11
Methyltransf_23
Methyltransf_31
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.70E-09
3.30E-05
8.90E-05
1.00E-04
WP_061885788.1 25851 26553 + 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.80E-17
3.30E-15
3.00E-04
WP_005556604.1 26743 28048 + 434PF05201
PF01488
PF00745
GlutR_N
Shikimate_DH
GlutR_dimer
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
3.10E-48
6.20E-45
1.90E-20
WP_005556606.1 28109 29333 + 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
5.80E-66
1.10E-05
WP_005556608.1 30600 29955 - 214PF00406
PF13207
PF05191
PF17213
ADK
AAA_17
ADK_lid
Hydin_ADK
Adenylate kinase
AAA domain
Adenylate kinase, active site lid
Hydin Adenylate kinase-like domain
1.20E-58
5.60E-23
4.10E-16
6.20E-05

Results for WP_008956042.1 [Halomonas sp. HAL1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008956034.1 99716 99425 - 96NO PFAM MATCH---
WP_008956035.1 100578 99882 - 231PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
3.90E-27
1.70E-21
WP_008956036.1 102059 100652 - 468PF02518
PF00512
PF00672
HATPase_c
HisKA
HAMP
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
7.80E-17
5.40E-15
9.40E-11
WP_008956037.1 105196 102058 - 1045PF00873
PF02460
ACR_tran
Patched
AcrB/AcrD/AcrF family
Patched family
3.10E-159
1.70E-09
WP_035586012.1 106419 105192 - 408PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
2.00E-12
2.90E-10
WP_008956039.1 106624 107218 + 197PF16925
PF00440
PF16859
TetR_C_13
TetR_N
TetR_C_11
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
5.70E-37
1.00E-15
3.20E-04
WP_008956040.1 108258 107247 - 336PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
5.90E-22
2.00E-14
9.00E-09
WP_008956041.1 108384 109269 + 294PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
2.20E-19
5.00E-12
1.60E-05
WP_008956042.1 109390 111574 + 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.50E-75
2.50E-74
6.60E-09
WP_008956043.1 111669 111885 + 71PF11391DUF2798Protein of unknown function (DUF2798)2.40E-20
WP_202945527.1 112813 111946 - 288PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
8.90E-33
5.60E-04
WP_008956045.1 113215 113071 - 47NO PFAM MATCH---
WP_008956046.1 114656 113420 - 411PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.10E-47
WP_008956047.1 116937 114702 - 744PF02922
PF02806
PF00128
CBM_48
Alpha-amylase_C
Alpha-amylase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, C-terminal all-beta domain
Alpha amylase, catalytic domain
3.50E-24
2.70E-20
7.00E-08
WP_008956048.1 120277 116929 - 1115PF00128
PF16657
PF18085
PF19974
Alpha-amylase
Malt_amylase_C
Mak_N_cap
TCAD9
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
Maltokinase N-terminal cap domain
Ternary complex associated domain 9
1.80E-72
2.90E-26
2.00E-08
9.20E-04
WP_008956049.1 122423 120395 - 675PF11896
PF00128
GlgE_dom_N_S
Alpha-amylase
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Alpha amylase, catalytic domain
9.00E-55
7.50E-07
WP_008956050.1 124680 122481 - 732PF02922
PF00128
CBM_48
Alpha-amylase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, catalytic domain
6.90E-21
2.50E-14

Results for WP_008087931.1 [Streptococcus ictaluri 707-05] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008087958.1 70690 72061 + 456PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
4.90E-36
8.70E-13
WP_008087891.1 72462 73215 + 250PF00793
PF03102
DAHP_synth_1
NeuB
DAHP synthetase I family
NeuB family
6.50E-70
9.20E-09
WP_008087981.1 73241 74324 + 360PF01761
PF13685
PF00465
DHQ_synthase
Fe-ADH_2
Fe-ADH
3-dehydroquinate synthase
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.50E-87
6.70E-08
2.30E-07
WP_008087994.1 75501 74382 - 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
2.30E-35
6.00E-18
WP_008087943.1 76625 75497 - 375PF12698
PF12679
ABC2_membrane_3
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 family transporter protein
9.40E-27
4.70E-13
WP_008088010.1 77559 76635 - 307PF00005
PF13304
PF03193
PF02463
ABC_tran
AAA_21
RsgA_GTPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
RecF/RecN/SMC N terminal domain
1.90E-34
2.10E-11
1.20E-04
3.10E-04
WP_040831897.1 78263 77579 - 227PF19393DUF5968Family of unknown function (DUF5968)5.10E-49
WP_008087834.1 78931 78259 - 223PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.80E-09
WP_008087931.1 80264 78905 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-41
WP_003060848.1 80275 81235 + 320INFERRED GENE---
WP_156033572.1 82388 81282 - 368PF13276
PF00665
PF13683
PF13333
PF01527
HTH_21
rve
rve_3
rve_2
HTH_Tnp_1
HTH-like domain
Integrase core domain
Integrase core domain
Integrase core domain
Transposase
6.00E-17
6.70E-15
1.30E-14
1.40E-13
3.00E-09
WP_008087933.1 83494 82546 - 315PF00881NitroreductaseNitroreductase family2.70E-13
WP_083835413.1 83863 83692 - 56NO PFAM MATCH---
WP_008087929.1 85175 84263 - 303NO PFAM MATCH---
WP_008087878.1 86181 85299 - 293PF08501
PF18317
PF01488
PF08659
Shikimate_dh_N
SDH_C
Shikimate_DH
KR
Shikimate dehydrogenase substrate binding domain
Shikimate 5'-dehydrogenase C-terminal domain
Shikimate / quinate 5-dehydrogenase
KR domain
7.00E-32
8.40E-12
4.70E-05
9.40E-05
WP_234944185.1 86590 86848 + 85NO PFAM MATCH---
WP_156033574.1 87965 87035 - 309PF18565Glyco_hydro2_C5Glycoside hydrolase family 2 C-terminal domain 53.90E-12

Results for WP_007895544.1 [Streptococcus pseudoporcinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007895283.1 992650 991021 - 542PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle1.30E-73
WP_007895366.1 992985 993558 + 190PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
2.10E-36
8.10E-12
WP_007895310.1 993919 994330 + 136NO PFAM MATCH---
WP_007895367.1 995991 994872 - 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
1.40E-39
8.70E-18
WP_007895679.1 997115 995987 - 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
4.20E-23
3.10E-19
3.50E-10
WP_007895430.1 998047 997123 - 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.20E-33
1.60E-14
9.30E-04
WP_007895509.1 998757 998067 - 229PF19393DUF5968Family of unknown function (DUF5968)5.20E-24
WP_007895456.1 999425 998753 - 223PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.20E-10
WP_007895544.1 1000758 999399 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-44
WP_007895384.1 1001835 1000770 - 354NO PFAM MATCH---
WP_007895325.1 1002782 1001831 - 316PF00881NitroreductaseNitroreductase family2.40E-16
WP_007895464.1 1003172 1003007 - 54NO PFAM MATCH---
WP_007895362.1 1006840 1003756 - 1027PF13306
PF13855
PF13599
LRR_5
LRR_8
Pentapeptide_4
BspA type Leucine rich repeat region (6 copies)
Leucine rich repeat
Pentapeptide repeats (9 copies)
2.00E-90
7.20E-08
4.70E-04
WP_007895348.1 1007798 1008557 + 252PF13930
PF01223
Endonuclea_NS_2
Endonuclease_NS
DNA/RNA non-specific endonuclease
DNA/RNA non-specific endonuclease
2.90E-22
1.60E-08
WP_007895624.1 1009340 1008785 - 184PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)6.80E-26
WP_007895530.1 1010219 1009364 - 284PF04439Adenyl_transfStreptomycin adenylyltransferase2.30E-64
WP_003085629.1 1010670 1013241 + 857INFERRED GENE---

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_008171990.1 [Marinobacter manganoxydans MnI7-9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008171984.1 960 48 - 303PF02678
PF05726
Pirin
Pirin_C
Pirin
Pirin C-terminal cupin domain
1.40E-30
1.10E-19
WP_008171986.1 1118 2138 + 339PF01699Na_Ca_exSodium/calcium exchanger protein6.30E-31
WP_008171988.1 2152 2848 + 231PF01177Asp_Glu_raceAsp/Glu/Hydantoin racemase1.20E-40
WP_008171990.1 2941 5134 + 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.20E-75
4.70E-73
5.80E-09
WP_008171991.1 5273 6833 + 519PF01645
PF09360
PF01070
PF00478
Glu_synthase
zf-CDGSH
FMN_dh
IMPDH
Conserved region in glutamate synthase
Iron-binding zinc finger CDGSH type
FMN-dependent dehydrogenase
IMP dehydrogenase / GMP reductase domain
5.50E-91
5.00E-19
3.20E-09
6.40E-04
WP_008171993.1 8881 6802 - 692PF01118
PF01488
Semialdhyde_dh
Shikimate_DH
Semialdehyde dehydrogenase, NAD binding domain
Shikimate / quinate 5-dehydrogenase
5.90E-04
6.40E-04
WP_008171996.1 9043 10057 + 337PF00274GlycolyticFructose-bisphosphate aldolase class-I3.20E-135
WP_008171998.1 11080 10087 - 330PF13483
PF12706
PF00753
Lactamase_B_3
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
8.90E-12
5.20E-11
2.80E-05
WP_008171999.1 12178 11206 - 323PF01207DusDihydrouridine synthase (Dus)2.50E-70
WP_008172001.1 14487 12315 - 723PF00141peroxidasePeroxidase4.40E-86
WP_008172004.1 15069 14850 - 72PF11197DUF2835Protein of unknown function (DUF2835)5.20E-26
WP_008172006.1 16968 15075 - 630PF00183
PF02518
PF13589
HSP90
HATPase_c
HATPase_c_3
Hsp90 protein
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
1.40E-135
2.90E-11
6.20E-11

Results for WP_003621370.1 [Lactobacillus delbrueckii subsp. bulgaricus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076611241.1 73891 74430 + 179INFERRED GENE---
WP_003624098.1 75185 74516 - 222PF02361CbiQCobalt transport protein2.60E-14
WP_003624100.1 76550 75194 - 451PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
1.90E-48
4.30E-24
2.90E-19
6.60E-12
2.50E-10
WP_035175998.1 76852 78328 + 491PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.50E-40
9.40E-13
7.00E-11
WP_003624103.1 78391 79240 + 282PF12833
PF00165
PF14525
PF02311
HTH_18
HTH_AraC
AraC_binding_2
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-binding-like domain
AraC-like ligand binding domain
9.80E-15
8.40E-11
8.80E-05
1.70E-04
WP_003624105.1 79381 80314 + 310PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
3.80E-25
1.30E-10
WP_003621375.1 80310 81057 + 248PF06182ABC2_membrane_6ABC-2 family transporter protein3.30E-14
WP_003624108.1 81053 81818 + 254PF06182ABC2_membrane_6ABC-2 family transporter protein1.30E-33
WP_003621370.1 82098 83271 + 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-24
WP_003624110.1 84104 83264 - 279PF01381HTH_3Helix-turn-helix2.20E-04
WP_003624112.1 85147 84247 - 299PF01435Peptidase_M48Peptidase family M483.60E-36
WP_003621365.1 85718 85163 - 184PF04011LemALemA family3.10E-56
WP_003624114.1 87021 85875 - 381PF03600CitMHSCitrate transporter4.50E-18
WP_003624116.1 87870 88782 + 303PF01844
PF13395
HNH
HNH_4
HNH endonuclease
HNH endonuclease
6.30E-10
1.30E-07
WP_011543537.1 89011 90151 + 379PF01476
PF00877
PF01080
LysM
NLPC_P60
Presenilin
LysM domain
NlpC/P60 family
Presenilin
4.20E-34
1.40E-24
5.20E-04
WP_035176000.1 90338 90542 + 67NO PFAM MATCH---
WP_003621351.1 91540 90778 - 253PF00005
PF13304
PF02463
PF09818
PF13175
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA ATPase domain
1.70E-34
4.00E-11
3.50E-08
9.70E-05
5.80E-04

Results for WP_008166394.1 [Pseudoalteromonas sp. BSi20652] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008166387.1 63876 64242 + 121PF09685DUF4870Domain of unknown function (DUF4870)8.30E-41
WP_008166388.1 64307 64742 + 144PF09335SNARE_assocSNARE associated Golgi protein2.90E-13
WP_002962340.1 64765 65121 + 118INFERRED GENE---
WP_007377310.1 65679 65124 - 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.00E-77
WP_008166390.1 66423 65703 - 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
9.70E-27
4.60E-24
1.20E-07
1.10E-04
WP_008166391.1 67387 66556 - 276PF02540NAD_synthaseNAD synthase7.40E-65
WP_008166392.1 68085 67455 - 209PF04337DUF480Protein of unknown function, DUF4807.20E-58
WP_033017105.1 71488 68128 - 1119PF02518
PF00072
PF00512
PF03924
PF08447
HATPase_c
Response_reg
HisKA
CHASE
PAS_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
PAS fold
4.50E-28
1.60E-23
6.30E-20
1.90E-16
5.40E-06
WP_008166394.1 73364 71603 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.60E-77
4.90E-57
WP_008166395.1 73511 75797 + 761PF01804Penicil_amidasePenicillin amidase1.20E-121
WP_008166396.1 75876 76725 + 282PF00753Lactamase_BMetallo-beta-lactamase superfamily8.20E-09
WP_008166397.1 76825 78358 + 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
7.20E-32
5.10E-05
WP_008166398.1 78357 78675 + 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein3.00E-20
WP_193371782.1 79621 78742 - 292PF00892EamAEamA-like transporter family4.80E-12
WP_008166400.1 79860 80244 + 127PF01124MAPEGMAPEG family1.80E-20
WP_008166401.1 81527 80318 - 402PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
5.30E-37
1.70E-17
WP_008166402.1 81911 81536 - 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
1.40E-34
7.00E-04

Results for WP_008109006.1 [Pseudoalteromonas sp. SK18] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076919940.1 36633 37008 + 124PF03965Penicillinase_RPenicillinase repressor7.20E-36
WP_039038200.1 37017 38229 + 403PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
5.90E-35
1.50E-17
WP_076919941.1 38687 38303 - 127PF01124MAPEGMAPEG family7.10E-18
WP_083708674.1 38930 39812 + 293PF00892EamAEamA-like transporter family8.40E-10
WP_010392612.1 40167 39849 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein6.70E-21
WP_076919942.1 41699 40166 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
8.20E-32
5.80E-05
WP_076919943.1 42636 41787 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily3.70E-08
WP_076919944.1 45001 42712 - 762PF01804Penicil_amidasePenicillin amidase6.00E-124
WP_008109006.1 45157 46918 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.10E-79
2.70E-57
WP_076919945.1 47035 50371 + 1111PF02518
PF00072
PF00512
PF03924
PF08447
HATPase_c
Response_reg
HisKA
CHASE
PAS_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
PAS fold
4.80E-29
2.20E-26
4.60E-19
2.50E-16
7.00E-05
WP_008109001.1 50412 51045 + 210PF04337DUF480Protein of unknown function, DUF4801.90E-58
WP_076919946.1 51118 51955 + 278PF02540NAD_synthaseNAD synthase3.60E-63
WP_076919947.1 52082 52802 + 239PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
1.80E-28
7.70E-25
8.10E-08
WP_008108996.1 52827 53382 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I7.30E-77
WP_076919949.1 53385 53742 + 118PF02152FolBDihydroneopterin aldolase9.10E-27
WP_008468537.1 54159 53718 - 146PF09335SNARE_assocSNARE associated Golgi protein1.70E-13
WP_008108988.1 54648 54282 - 121PF09685DUF4870Domain of unknown function (DUF4870)4.40E-40

Results for WP_008136128.1 [Pseudoalteromonas sp. BSi20495] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008136117.1 90617 90983 + 121PF09685DUF4870Domain of unknown function (DUF4870)6.50E-40
WP_033015687.1 91211 91646 + 144PF09335SNARE_assocSNARE associated Golgi protein4.30E-15
WP_007377309.1 92012 91655 - 118PF02152FolBDihydroneopterin aldolase3.30E-27
WP_007377310.1 92570 92015 - 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.00E-77
WP_008136123.1 93315 92595 - 239PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
4.10E-26
3.90E-23
1.30E-06
WP_008136125.1 94288 93457 - 276PF02540NAD_synthaseNAD synthase1.10E-62
WP_007377313.1 94971 94341 - 209PF04337DUF480Protein of unknown function, DUF4802.80E-60
WP_008136126.1 98377 95014 - 1120PF02518
PF00072
PF00512
PF03924
PF01590
HATPase_c
Response_reg
HisKA
CHASE
GAF
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
GAF domain
2.50E-27
3.10E-25
6.00E-19
1.20E-17
1.00E-04
WP_008136128.1 100305 98544 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-77
4.90E-58
WP_008136130.1 100461 102747 + 761PF01804Penicil_amidasePenicillin amidase1.80E-120
WP_008136133.1 102804 103653 + 282PF00753Lactamase_BMetallo-beta-lactamase superfamily4.10E-09
WP_008136135.1 103752 105285 + 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
7.20E-32
7.60E-05
WP_008136137.1 105284 105602 + 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein3.00E-21
WP_193371852.1 106557 105669 - 295PF00892EamAEamA-like transporter family1.20E-12
WP_008136139.1 106792 107176 + 127PF01124MAPEGMAPEG family6.50E-20
WP_008136141.1 108459 107250 - 402PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
9.20E-37
2.10E-19
WP_008136143.1 108843 108468 - 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
6.00E-35
3.90E-04

Results for WP_007483195.1 [Acinetobacter venetianus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007483212.1 7514 9116 + 533PF01039Carboxyl_transCarboxyl transferase domain8.30E-154
WP_007483210.1 9125 9929 + 267PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
3.30E-52
7.70E-34
WP_007483208.1 9940 11932 + 663PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
4.40E-75
2.70E-45
1.30E-36
8.00E-15
6.90E-12
WP_007483206.1 11928 12831 + 300PF00682HMGL-likeHMGL-like9.90E-55
WP_007483204.1 13866 12927 - 312PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-33
1.10E-15
WP_007483202.1 14068 17539 + 1156PF20169
PF01558
PF02775
DUF6537
POR
TPP_enzyme_C
Family of unknown function (DUF6537)
Pyruvate ferredoxin/flavodoxin oxidoreductase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
2.10E-48
2.10E-24
4.00E-06
WP_004653525.1 17862 18054 + 64INFERRED GENE---
WP_007483197.1 19011 18216 - 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-50
1.90E-36
4.60E-09
WP_007483195.1 21443 19241 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.30E-75
4.20E-73
1.90E-08
WP_007483193.1 22282 21724 - 185PF08212
PF00061
Lipocalin_2
Lipocalin
Lipocalin-like domain
Lipocalin / cytosolic fatty-acid binding protein family
3.10E-48
2.30E-05
WP_007483191.1 23943 22461 - 493PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
2.70E-116
2.70E-39
WP_007483189.1 25089 24114 - 324PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.30E-53
WP_007483187.1 26463 25122 - 446PF04996AstBSuccinylarginine dihydrolase6.40E-217
WP_007483184.1 27951 26481 - 489PF00171AldedhAldehyde dehydrogenase family4.20E-121
WP_007483181.1 28994 27950 - 347PF04958AstAArginine N-succinyltransferase beta subunit6.20E-136
WP_004879612.1 30221 29015 - 401PF00202
PF00155
Aminotran_3
Aminotran_1_2
Aminotransferase class-III
Aminotransferase class I and II
3.70E-123
2.70E-04
WP_122975452.1 31570 30295 - 424PF00208
PF02812
ELFV_dehydrog
ELFV_dehydrog_N
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
6.80E-73
1.60E-55

Results for WP_009113221.1 [Brenneria nigrifluens DSM 30175 = ATCC 13028] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009113212.1 2748023 2748761 + 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
2.70E-78
1.20E-07
2.00E-06
1.40E-05
1.50E-05
WP_009113213.1 2748742 2749519 + 258PF00977
PF01207
PF03060
PF05690
His_biosynth
Dus
NMO
ThiG
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
7.30E-74
1.90E-05
9.30E-05
7.40E-04
WP_009113214.1 2749512 2750127 + 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
2.30E-29
1.00E-15
WP_009113215.1 2750512 2750227 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.20E-29
1.80E-07
7.50E-04
WP_040343910.1 2752284 2750610 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-96
2.20E-12
2.20E-06
WP_009113217.1 2753079 2752392 - 228PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.00E-82
5.40E-08
1.40E-05
1.00E-04
9.80E-04
WP_009113218.1 2754552 2753262 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.30E-149
WP_009113220.1 2755752 2754666 - 361PF00266Aminotran_5Aminotransferase class-V1.80E-63
WP_009113221.1 2755999 2757763 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-80
4.20E-63
WP_009113222.1 2758208 2759066 + 285PF01226Form_Nir_transFormate/nitrite transporter1.70E-73
WP_009113223.1 2759124 2761410 + 761PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.60E-207
3.10E-43
WP_009113224.1 2761676 2762417 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
4.90E-18
3.90E-06
WP_009113225.1 2764031 2762462 - 522PF05378
PF01968
PF13941
PF06406
Hydant_A_N
Hydantoinase_A
MutL
StbA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
4.80E-34
8.60E-31
1.00E-05
3.50E-05
WP_009113226.1 2765149 2764039 - 369PF06032DUF917Protein of unknown function (DUF917)4.70E-124
WP_009113227.1 2766507 2765202 - 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin1.10E-19
WP_009113228.1 2766780 2767704 + 307PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
3.50E-14
5.00E-14
WP_040343247.1 2768857 2767705 - 383PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
6.40E-34
2.00E-07
4.70E-07
1.10E-06

Results for WP_009182911.1 [Desulfovibrio carbinoliphilus subsp. oakridgensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009182904.1 4026625 4026967 + 113NO PFAM MATCH---
WP_009182905.1 4027062 4027650 + 195PF01965
PF00117
PF17124
DJ-1_PfpI
GATase
ThiJ_like
DJ-1/PfpI family
Glutamine amidotransferase class-I
ThiJ/PfpI family-like
1.20E-45
6.30E-04
6.80E-04
WP_009182906.1 4027824 4028244 + 139NO PFAM MATCH---
WP_009182907.1 4029137 4028375 - 253NO PFAM MATCH---
WP_232286106.1 4029337 4030159 + 273PF00535
PF13641
PF10111
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
9.20E-30
3.90E-19
5.70E-15
WP_009182909.1 4030542 4030182 - 119PF02391MoaEMoaE protein3.90E-07
WP_009182910.1 4030570 4033270 + 899PF07719TPR_2Tetratricopeptide repeat5.60E-07
WP_009109179.1 4033829 4033511 - 105PF04358DsrCDsrC like protein5.10E-36
WP_009182911.1 4035875 4034117 - 585PF02624
PF07719
PF00515
PF13181
PF13432
YcaO
TPR_2
TPR_1
TPR_8
TPR_16
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.10E-60
5.00E-12
2.10E-11
4.10E-06
1.10E-05
WP_009182912.1 4036666 4035934 - 243PF10294
PF05175
PF13489
Methyltransf_16
MTS
Methyltransf_23
Lysine methyltransferase
Methyltransferase small domain
Methyltransferase domain
5.30E-13
9.80E-07
3.30E-05
WP_009182913.1 4038865 4037248 - 538PF00535
PF13641
PF13176
PF07719
Glycos_transf_2
Glyco_tranf_2_3
TPR_7
TPR_2
Glycosyl transferase family 2
Glycosyltransferase like family 2
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-13
1.50E-12
4.10E-04
6.50E-04
WP_009182914.1 4040265 4039149 - 371PF00144Beta-lactamaseBeta-lactamase3.60E-48
WP_009182915.1 4041255 4040295 - 319PF08349
PF04463
DUF1722
2-thiour_desulf
Protein of unknown function (DUF1722)
2-thiouracil desulfurase
9.90E-43
1.10E-39
WP_009182916.1 4041384 4042029 + 214PF00702Hydrolasehaloacid dehalogenase-like hydrolase3.10E-04
WP_009182917.1 4042021 4042666 + 214PF02666PS_DcarbxylasePhosphatidylserine decarboxylase7.80E-35
WP_009182918.1 4042666 4043443 + 258PF01066CDP-OH_P_transfCDP-alcohol phosphatidyltransferase6.30E-20
WP_009182919.1 4043570 4045109 + 512PF00682
PF08502
HMGL-like
LeuA_dimer
HMGL-like
LeuA allosteric (dimerisation) domain
3.70E-92
6.00E-34

Results for WP_014186022.1 [Desulfosporosinus orientis DSM 765] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_242832348.1 3846046 3845821 - 74PF02913FAD-oxidase_CFAD linked oxidases, C-terminal domain2.00E-06
WP_042331381.1 3846267 3845991 - 91PF02913FAD-oxidase_CFAD linked oxidases, C-terminal domain4.30E-08
WP_042331383.1 3847682 3846359 - 440PF00206Lyase_1Lyase2.60E-80
WP_014186017.1 3848883 3847662 - 406PF18133
PF18128
PF01926
PF00009
PF00350
HydF_tetramer
HydF_dimer
MMR_HSR1
GTP_EFTU
Dynamin_N
Hydrogen maturase F tetramerization domain
Hydrogen maturase F dimerization domain
50S ribosome-binding GTPase
Elongation factor Tu GTP binding domain
Dynamin family
8.10E-49
3.20E-41
6.70E-21
1.20E-08
7.80E-08
WP_014186018.1 3850315 3848896 - 472PF06968
PF04055
BATS
Radical_SAM
Biotin and Thiamin Synthesis associated domain
Radical SAM superfamily
5.20E-24
3.20E-09
WP_014186019.1 3851396 3850331 - 354PF04055Radical_SAMRadical SAM superfamily1.40E-10
WP_014186020.1 3851667 3851376 - 96NO PFAM MATCH---
WP_158309048.1 3851923 3852133 + 69NO PFAM MATCH---
WP_014186021.1 3852782 3852188 - 197NO PFAM MATCH---
WP_014186022.1 3854695 3852784 - 636PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-52
WP_014186023.1 3856185 3854682 - 500PF04055
PF13353
PF13394
PF13186
Radical_SAM
Fer4_12
Fer4_14
SPASM
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
Iron-sulfur cluster-binding domain
2.50E-15
4.50E-08
5.10E-07
4.40E-04
WP_014186024.1 3857617 3856195 - 473PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.90E-18
1.30E-07
9.90E-07
WP_042331387.1 3859041 3857613 - 475PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.10E-15
8.20E-09
8.20E-08
WP_014186026.1 3859377 3859092 - 94PF07862Nif11Nif11 domain9.10E-13
WP_014186027.1 3861067 3859369 - 565PF04055Radical_SAMRadical SAM superfamily4.60E-15
WP_014186028.1 3862476 3861330 - 381NO PFAM MATCH---
WP_242832547.1 3866505 3863025 - 1159PF04122
PF13472
PF18998
PF01833
PF13620
CW_binding_2
Lipase_GDSL_2
Flg_new_2
TIG
CarboxypepD_reg
ell wall binding domain 2 (CWB2)
GDSL-like Lipase/Acylhydrolase family
Divergent InlB B-repeat domain
IPT/TIG domain
Carboxypeptidase regulatory-like domain
1.60E-58
1.40E-18
3.40E-15
1.20E-09
1.10E-06
WP_242832349.1 3868143 3867903 - 79NO PFAM MATCH---

Results for WP_014186033.1 [Desulfosporosinus orientis DSM 765] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014186026.1 3859377 3859092 - 94PF07862Nif11Nif11 domain9.10E-13
WP_014186027.1 3861067 3859369 - 565PF04055Radical_SAMRadical SAM superfamily4.60E-15
WP_014186028.1 3862476 3861330 - 381NO PFAM MATCH---
WP_242832547.1 3866505 3863025 - 1159PF04122
PF13472
PF18998
PF01833
PF13620
CW_binding_2
Lipase_GDSL_2
Flg_new_2
TIG
CarboxypepD_reg
ell wall binding domain 2 (CWB2)
GDSL-like Lipase/Acylhydrolase family
Divergent InlB B-repeat domain
IPT/TIG domain
Carboxypeptidase regulatory-like domain
1.60E-58
1.40E-18
3.40E-15
1.20E-09
1.10E-06
WP_242832349.1 3868143 3867903 - 79NO PFAM MATCH---
WP_158309049.1 3868371 3868509 + 45NO PFAM MATCH---
WP_014186031.1 3870609 3868581 - 675PF02872
PF08239
PF00149
PF09587
PF06347
5_nucleotid_C
SH3_3
Metallophos
PGA_cap
SH3_4
5'-nucleotidase, C-terminal domain
Bacterial SH3 domain
Calcineurin-like phosphoesterase
Bacterial capsule synthesis protein PGA_cap
Bacterial SH3 domain
6.90E-42
1.20E-22
2.50E-11
3.40E-07
4.40E-07
WP_014186032.1 3871207 3870877 - 109PF14407
PF02979
Frankia_peptide
NHase_alpha
Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Nitrile hydratase, alpha chain
8.40E-08
1.50E-05
WP_014186033.1 3873587 3871343 - 747PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-102
WP_085929338.1 3875232 3873663 - 522PF00881
PF18679
Nitroreductase
HTH_57
Nitroreductase family
ThcOx helix turn helix domain
5.20E-16
9.30E-07
WP_014186035.1 3875699 3875366 - 110PF02979
PF14407
NHase_alpha
Frankia_peptide
Nitrile hydratase, alpha chain
Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
9.10E-07
9.50E-06
WP_242832350.1 3875870 3875723 - 48NO PFAM MATCH---
WP_014186037.1 3876171 3875838 - 110PF02979
PF14407
NHase_alpha
Frankia_peptide
Nitrile hydratase, alpha chain
Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
7.80E-06
9.10E-06
WP_014186038.1 3876821 3876305 - 171PF08281
PF04542
PF04545
PF07638
PF00196
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
ECF sigma factor
Bacterial regulatory proteins, luxR family
2.00E-13
9.10E-13
1.40E-12
6.80E-05
5.30E-04
WP_042331389.1 3877089 3876837 - 83NO PFAM MATCH---
WP_014186039.1 3878082 3877650 - 143PF12098DUF3574Protein of unknown function (DUF3574)5.80E-08
WP_242832351.1 3878358 3878118 - 79NO PFAM MATCH---

Results for WP_014586808.1 [Methanothrix harundinacea 6Ac] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014586800.1 1348109 1346996 - 370PF00591
PF02885
Glycos_transf_3
Glycos_trans_3N
Glycosyl transferase family, a/b domain
Glycosyl transferase family, helical bundle domain
1.80E-55
4.20E-12
WP_014586801.1 1349153 1348115 - 345PF08240
PF00107
ADH_N
ADH_zinc_N
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
1.30E-25
3.90E-09
WP_014586802.1 1350274 1349440 - 277PF04414tRNA_deacylaseD-aminoacyl-tRNA deacylase2.40E-63
WP_014586803.1 1351332 1350270 - 353PF01047
PF01978
PF12802
MarR
TrmB
MarR_2
MarR family
Sugar-specific transcriptional regulator TrmB
MarR family
2.50E-05
2.00E-04
3.50E-04
WP_048144888.1 1352064 1351458 - 201PF00753Lactamase_BMetallo-beta-lactamase superfamily3.70E-17
WP_014586805.1 1353446 1352105 - 446PF00206
PF10397
PF08328
Lyase_1
ADSL_C
ASL_C
Lyase
Adenylosuccinate lyase C-terminus
Adenylosuccinate lyase C-terminal
3.50E-50
1.50E-21
5.90E-04
WP_052300997.1 1355362 1353574 - 595PF02872
PF00149
PF12850
5_nucleotid_C
Metallophos
Metallophos_2
5'-nucleotidase, C-terminal domain
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase superfamily domain
4.00E-38
4.50E-09
4.80E-04
WP_143763323.1 1355606 1356887 + 426PF03600CitMHSCitrate transporter1.70E-36
WP_014586808.1 1357072 1358293 + 406PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-95
WP_014586809.1 1358246 1358900 + 217PF07812TfuATfuA-like protein5.10E-46
WP_014586810.1 1358893 1359172 + 92PF02597ThiSThiS family1.10E-17
WP_014586811.1 1359210 1359939 + 242PF00899ThiFThiF family2.20E-56
WP_014586812.1 1359962 1360430 + 155PF09001DUF1890Domain of unknown function (DUF1890)6.70E-53
WP_014586813.1 1360430 1360703 + 90PF08979DUF1894Domain of unknown function (DUF1894)2.90E-38
WP_014586814.1 1360699 1360978 + 92PF02597ThiSThiS family1.70E-15
WP_143763324.1 1361006 1361399 + 130PF02391MoaEMoaE protein2.50E-32
WP_014586816.1 1362827 1361456 - 456PF07088
PF06745
PF13191
PF13481
PF13401
GvpD_P-loop
ATPase
AAA_16
AAA_25
AAA_22
GvpD gas vesicle protein, P-loop domain
KaiC
AAA ATPase domain
AAA domain
AAA domain
8.30E-24
1.00E-12
4.40E-05
5.80E-04
8.00E-04

Results for WP_014248536.1 [Azospirillum lipoferum 4B] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014248528.1 2186924 2187140 + 71NO PFAM MATCH---
WP_014248529.1 2187149 2189927 + 925PF02518
PF00512
HATPase_c
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
6.20E-22
3.90E-18
WP_014248530.1 2190175 2191846 + 556PF00072
PF02518
PF13188
PF13426
PF08448
Response_reg
HATPase_c
PAS_8
PAS_9
PAS_4
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS domain
PAS domain
PAS fold
5.60E-22
3.90E-20
1.20E-07
3.70E-05
7.10E-05
WP_014248531.1 2191911 2193636 + 574PF12860
PF02518
PF00512
PF00989
PF13188
PAS_7
HATPase_c
HisKA
PAS
PAS_8
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS fold
PAS domain
5.10E-24
1.00E-15
2.60E-12
3.40E-06
1.20E-05
WP_014248532.1 2193632 2194028 + 131PF00072Response_regResponse regulator receiver domain7.50E-25
WP_014248533.1 2195239 2194081 - 385PF00899
PF00581
ThiF
Rhodanese
ThiF family
Rhodanese-like domain
6.20E-55
5.10E-09
WP_197541512.1 2195537 2195252 - 94PF02597ThiSThiS family2.60E-06
WP_014248535.1 2196958 2195533 - 474PF07812TfuATfuA-like protein1.90E-43
WP_014248536.1 2198271 2196954 - 438PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-75
WP_014248537.1 2199765 2198394 - 456NO PFAM MATCH---
WP_014248539.1 2200627 2200072 - 184PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
4.30E-29
9.30E-04
WP_014248540.1 2200976 2201426 + 149NO PFAM MATCH---
WP_014248541.1 2201543 2201825 + 93NO PFAM MATCH---
WP_014248542.1 2201957 2202854 + 298PF02091
PF09113
tRNA-synt_2e
N-glycanase_C
Glycyl-tRNA synthetase alpha subunit
Peptide-N-glycosidase F, C terminal
3.30E-150
6.90E-04
WP_014248543.1 2202858 2204946 + 695PF02092
PF05746
tRNA_synt_2f
DALR_1
Glycyl-tRNA synthetase beta subunit
DALR anticodon binding domain
3.50E-212
2.30E-10
WP_014248544.1 2205105 2206476 + 456PF19289
PF19290
PF01523
PmbA_TldD_C
PmbA_TldD_M
PmbA_TldD
PmbA/TldA metallopeptidase C-terminal domain
PmbA/TldA metallopeptidase central domain
PmbA/TldA metallopeptidase domain 1
4.80E-73
5.80E-13
7.30E-06
WP_014248545.1 2206687 2207914 + 408PF00909Ammonium_transpAmmonium Transporter Family1.70E-82

Results for WP_014189395.1 [Azospirillum lipoferum 4B] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014189387.1 128493 128928 + 144PF10604Polyketide_cyc2Polyketide cyclase / dehydrase and lipid transport2.90E-17
WP_014189388.1 128991 130383 + 463NO PFAM MATCH---
WP_014189389.1 130385 131045 + 219PF01144CoA_transCoenzyme A transferase8.20E-65
WP_014189390.1 131062 131710 + 215PF01144CoA_transCoenzyme A transferase8.10E-35
WP_014189391.1 131722 132511 + 262PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
9.90E-58
6.30E-55
3.00E-10
WP_044553123.1 132960 132579 - 126PF13467RHH_4Ribbon-helix-helix domain2.30E-17
WP_044553126.1 133778 133067 - 236PF00027
PF13545
PF00325
cNMP_binding
HTH_Crp_2
Crp
Cyclic nucleotide-binding domain
Crp-like helix-turn-helix domain
Bacterial regulatory proteins, crp family
1.70E-22
1.20E-17
3.90E-07
WP_014189394.1 134608 133855 - 250PF07812TfuATfuA-like protein3.20E-48
WP_014189395.1 135876 134604 - 423PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-82
WP_014189396.1 136195 135997 - 65NO PFAM MATCH---
WP_081506014.1 136349 136637 + 95PF13467RHH_4Ribbon-helix-helix domain9.00E-15
WP_014189397.1 137225 136676 - 182PF13424
PF17874
PF13181
PF13428
TPR_12
TPR_MalT
TPR_8
TPR_14
Tetratricopeptide repeat
MalT-like TPR region
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-07
1.90E-06
2.30E-05
1.20E-04
WP_244442499.1 137792 137243 - 182PF01609
PF13586
PF13612
PF13359
DDE_Tnp_1
DDE_Tnp_1_2
DDE_Tnp_1_3
DDE_Tnp_4
Transposase DDE domain
Transposase DDE domain
Transposase DDE domain
DDE superfamily endonuclease
1.50E-18
4.70E-12
3.80E-10
5.80E-04
AZOLI_RS33415 137719 137998 + 93INFERRED GENE---
WP_014189398.1 140603 138032 - 856PF00211
PF13191
Guanylate_cyc
AAA_16
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
5.80E-16
1.40E-13
WP_014189399.1 142713 140847 - 621PF00920ILVD_EDDDehydratase family3.40E-214
WP_014189400.1 143284 142939 - 114PF03860DUF326Domain of Unknown Function (DUF326)1.00E-04

Results for WP_014197662.1 [Azospirillum baldaniorum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_174451889.1 645 3747 + 1033PF00211
PF13191
PF13424
PF07719
PF13176
Guanylate_cyc
AAA_16
TPR_12
TPR_2
TPR_7
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-21
8.20E-17
4.70E-10
5.40E-08
2.10E-04
WP_014197659.1 4072 3763 - 102PF13467RHH_4Ribbon-helix-helix domain4.60E-21
WP_014197661.1 4303 4498 + 64NO PFAM MATCH---
WP_014197662.1 4661 5924 + 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-83
WP_014197663.1 5977 6745 + 255PF07812TfuATfuA-like protein4.40E-49
WP_014197664.1 6801 7512 + 236PF00027
PF13545
PF00392
cNMP_binding
HTH_Crp_2
GntR
Cyclic nucleotide-binding domain
Crp-like helix-turn-helix domain
Bacterial regulatory proteins, gntR family
1.80E-23
6.60E-15
2.20E-04
WP_145707769.1 7617 8004 + 128PF13467RHH_4Ribbon-helix-helix domain1.50E-19
WP_109138743.1 8221 10264 + 680PF17159
PF02518
PF08448
PF00989
PF00512
MASE3
HATPase_c
PAS_4
PAS
HisKA
Membrane-associated sensor domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
PAS fold
His Kinase A (phospho-acceptor) domain
5.50E-77
8.00E-21
2.90E-09
1.70E-07
4.20E-07
WP_041812332.1 10241 10637 + 131PF00072Response_regResponse regulator receiver domain1.50E-18
WP_014197670.1 10991 11924 + 310PF01370
PF16363
PF01073
PF02719
PF04321
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
3-beta hydroxysteroid dehydrogenase/isomerase family
Polysaccharide biosynthesis protein
RmlD substrate binding domain
1.90E-55
4.50E-47
6.60E-20
3.90E-19
3.60E-13
WP_244948017.1 13584 11943 - 546PF02690
PF01895
Na_Pi_cotrans
PhoU
Na+/Pi-cotransporter
PhoU domain
1.90E-38
6.40E-16
WP_145707774.1 14668 13768 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
9.30E-43
5.50E-04

Results for WP_014283811.1 [Pseudovibrio sp. FO-BEG1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014283804.1 1013945 1013555 - 129PF04355SmpA_OmlASmpA / OmlA family1.30E-06
WP_041767980.1 1014562 1015642 + 359NO PFAM MATCH---
WP_037038275.1 1016613 1016880 + 88NO PFAM MATCH---
WP_208998087.1 1016963 1017134 + 56NO PFAM MATCH---
WP_041767983.1 1018165 1019542 + 458PF01212
PF01041
Beta_elim_lyase
DegT_DnrJ_EryC1
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
4.40E-94
1.30E-04
WP_014283807.1 1019754 1021038 + 427PF03222
PF13520
Trp_Tyr_perm
AA_permease_2
Tryptophan/tyrosine permease family
Amino acid permease
2.00E-98
1.00E-04
WP_014283809.1 1022220 1021995 - 74NO PFAM MATCH---
WP_014283810.1 1023827 1022261 - 521PF07812TfuATfuA-like protein6.40E-48
WP_014283811.1 1025059 1023823 - 411PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-71
WP_014283813.1 1025687 1026476 + 262NO PFAM MATCH---
WP_014283814.1 1027373 1026584 - 262PF12680
PF07366
SnoaL_2
SnoaL
SnoaL-like domain
SnoaL-like polyketide cyclase
2.60E-10
2.30E-08
WP_051125878.1 1027879 1027450 - 142NO PFAM MATCH---
WP_014283816.1 1029903 1028070 - 610PF00999
PF02254
Na_H_Exchanger
TrkA_N
Sodium/hydrogen exchanger family
TrkA-N domain
2.10E-53
9.90E-25
WP_014283817.1 1030841 1030226 - 204PF02525Flavodoxin_2Flavodoxin-like fold2.20E-32
WP_014283818.1 1031053 1031938 + 294PF06719
PF12833
PF00165
PF00440
AraC_N
HTH_18
HTH_AraC
TetR_N
AraC-type transcriptional regulator N-terminus
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Bacterial regulatory proteins, tetR family
1.90E-33
7.50E-22
1.60E-16
6.20E-04
WP_041768880.1 1032381 1031934 - 148PF10025DUF2267Uncharacterized conserved protein (DUF2267)8.80E-13
WP_041767987.1 1033368 1032996 - 123PF14248DUF4345Domain of unknown function (DUF4345)3.60E-07

Results for WP_014690715.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_014236990.1 [Azospira oryzae PS] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014236982.1 2013381 2013033 - 115NO PFAM MATCH---
WP_014236983.1 2014454 2013515 - 312PF02195
PF08535
ParBc
KorB
ParB/Sulfiredoxin domain
KorB domain
7.20E-18
2.40E-04
WP_014236984.1 2015177 2014613 - 187PF00072
PF02954
PF13556
Response_reg
HTH_8
HTH_30
Response regulator receiver domain
Bacterial regulatory protein, Fis family
PucR C-terminal helix-turn-helix domain
8.20E-20
1.40E-11
1.70E-05
WP_014236985.1 2016441 2015178 - 420PF02518
PF00512
PF13581
HATPase_c
HisKA
HATPase_c_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
2.50E-14
3.60E-05
1.20E-04
WP_014236986.1 2016659 2016908 + 82NO PFAM MATCH---
WP_014236987.1 2016885 2018433 + 515PF01654Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I2.30E-171
WP_014236988.1 2018446 2019586 + 379PF02322Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II1.80E-105
WP_014236989.1 2019607 2019703 + 31PF08173YbgT_YccBMembrane bound YbgT-like protein9.00E-16
WP_014236990.1 2022013 2019799 - 737PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
8.60E-74
3.70E-70
2.10E-08
WP_014236991.1 2026201 2022223 - 1325PF02514CobN-Mg_chelCobN/Magnesium Chelatase2.00E-301
WP_014236992.1 2026526 2026184 - 113PF09919DUF2149Uncharacterized conserved protein (DUF2149)6.10E-33
WP_014236993.1 2027112 2026503 - 202PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family6.60E-13
WP_014236994.1 2029406 2027126 - 759PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.70E-63
7.40E-22
WP_014236995.1 2031200 2030015 - 394PF00268Ribonuc_red_smRibonucleotide reductase, small chain4.70E-60
WP_014236996.1 2034043 2031196 - 948PF02867
PF00317
PF03477
Ribonuc_red_lgC
Ribonuc_red_lgN
ATP-cone
Ribonucleotide reductase, barrel domain
Ribonucleotide reductase, all-alpha domain
ATP cone domain
1.70E-180
3.10E-23
8.50E-23
WP_157870610.1 2034922 2034619 - 100NO PFAM MATCH---
WP_014236997.1 2035027 2036746 + 572PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.40E-59
2.40E-50
7.20E-47

Results for WP_014690720.1 [Actinoplanes sp. SE50] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014690711.1 4158874 4161175 + 766NO PFAM MATCH---
WP_014690712.1 4161167 4161830 + 220PF11209LmeALmeA-like phospholipid-binding1.20E-19
WP_043511654.1 4161870 4162863 + 330PF03088
PF08450
PF20067
Str_synth
SGL
SSL_N
Strictosidine synthase
SMP-30/Gluconolactonase/LRE-like region
Strictosidine synthase-like, N-terminal
4.00E-18
3.30E-17
5.00E-10
WP_197688153.1 4163797 4165054 + 418PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-63
WP_014690716.1 4165065 4165677 + 203NO PFAM MATCH---
WP_014690717.1 4165711 4167331 + 539NO PFAM MATCH---
WP_043511657.1 4167335 4168034 + 232PF00881NitroreductaseNitroreductase family2.10E-05
WP_014690719.1 4168036 4169644 + 535NO PFAM MATCH---
WP_014690720.1 4169640 4171467 + 608PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-72
WP_014690721.1 4171486 4174156 + 889PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-28
WP_014690722.1 4174136 4175051 + 304PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.80E-51
WP_014690723.1 4175320 4175479 + 52NO PFAM MATCH---
WP_014690724.1 4175582 4176641 + 352NO PFAM MATCH---
WP_014690725.1 4176654 4178568 + 637PF02310
PF04055
B12-binding
Radical_SAM
B12 binding domain
Radical SAM superfamily
1.50E-11
2.00E-08
WP_014690726.1 4178581 4179226 + 214PF19142DUF5825Family of unknown function (DUF5825)1.30E-63
WP_014690727.1 4180217 4179335 - 293PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
4.90E-47
7.90E-23
WP_085945643.1 4181728 4180213 - 504PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
9.10E-47
4.20E-32

Results for WP_014690157.1 [Actinoplanes sp. SE50] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_080127838.1 3487092 3487443 + 116PF06772LtrABacterial low temperature requirement A protein (LtrA)1.60E-08
WP_014690150.1 3488175 3487371 - 267PF04321
PF01370
PF16363
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
RmlD substrate binding domain
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
1.10E-41
8.80E-19
8.50E-07
WP_014690151.1 3488666 3488225 - 146PF19545DUF6069Family of unknown function (DUF6069)1.50E-26
WP_014690152.1 3488796 3489930 + 377PF07730HisKA_3Histidine kinase4.00E-15
WP_197688141.1 3490047 3490701 + 217PF00072
PF00196
PF08281
PF04545
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.50E-28
2.60E-14
2.00E-08
1.30E-05
WP_014690154.1 3491454 3490737 - 238NO PFAM MATCH---
WP_014690155.1 3491755 3491560 - 64NO PFAM MATCH---
WP_014690156.1 3492001 3493756 + 584PF13231
PF10101
PMT_2
DUF2339
Dolichyl-phosphate-mannose-protein mannosyltransferase
Predicted membrane protein (DUF2339)
4.10E-11
1.10E-04
WP_014690157.1 3493943 3495263 + 439PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-72
WP_014690158.1 3495333 3495963 + 209NO PFAM MATCH---
WP_014690159.1 3495959 3497546 + 528PF00881NitroreductaseNitroreductase family6.80E-05
WP_014690160.1 3497542 3498268 + 241PF00881NitroreductaseNitroreductase family3.10E-06
WP_014690161.1 3498736 3499846 + 369PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)9.40E-04
WP_014690162.1 3501138 3500232 - 301PF01380
PF13580
SIS
SIS_2
SIS domain
SIS domain
7.30E-10
1.80E-07
WP_014690163.1 3502034 3501137 - 298PF01380
PF01418
PF13580
SIS
HTH_6
SIS_2
SIS domain
Helix-turn-helix domain, rpiR family
SIS domain
2.30E-23
1.10E-16
3.70E-06
WP_231956939.1 3503357 3502097 - 419PF07075DUF1343Protein of unknown function (DUF1343)1.20E-111
WP_014690165.1 3503530 3504763 + 410PF00144Beta-lactamaseBeta-lactamase1.30E-64

Results for WP_014332488.1 [Sinorhizobium fredii CCBAU 45436] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037452089.1 1539944 1541135 + 396PF07992
PF14759
PF00070
PF13450
PF01266
Pyr_redox_2
Reductase_C
Pyr_redox
NAD_binding_8
DAO
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
4.90E-62
8.80E-25
4.80E-21
3.30E-10
9.40E-10
WP_014332481.1 1541665 1541164 - 166PF12850Metallophos_2Calcineurin-like phosphoesterase superfamily domain3.50E-07
WP_014332482.1 1542170 1541699 - 156PF01037
PF13404
PF13412
PF13545
PF08279
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_Crp_2
HTH_11
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
HTH domain
3.50E-14
9.20E-14
2.80E-13
2.00E-04
6.40E-04
WP_014332483.1 1543644 1542321 - 440PF07804
PF13657
HipA_C
Couple_hipA
HipA-like C-terminal domain
HipA N-terminal domain
6.70E-48
1.70E-05
WP_037402846.1 1543918 1543633 - 94PF01381
PF13560
PF12844
PF13443
PF04545
HTH_3
HTH_31
HTH_19
HTH_26
Sigma70_r4
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
Sigma-70, region 4
1.20E-10
6.70E-10
1.40E-06
1.10E-04
3.70E-04
WP_014332485.1 1544311 1544910 + 199INFERRED GENE---
WP_037452086.1 1547618 1544972 - 881PF00211
PF13424
PF17874
PF13191
Guanylate_cyc
TPR_12
TPR_MalT
AAA_16
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
MalT-like TPR region
AAA ATPase domain
1.60E-12
5.20E-11
9.90E-09
8.30E-06
WP_244425040.1 1548784 1547602 - 393PF07812TfuATfuA-like protein7.10E-32
WP_014332488.1 1550019 1548783 - 411PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-66
WP_014332489.1 1550212 1550008 - 67NO PFAM MATCH---
WP_100209378.1 1550564 1551152 + 195PF14518Haem_oxygenas_2Iron-containing redox enzyme2.10E-09
WP_020749734.1 1551244 1551337 + 31INFERRED GENE---
WP_037446536.1 1552519 1551439 - 359PF13358
PF13551
PF13384
PF13565
PF13518
DDE_3
HTH_29
HTH_23
HTH_32
HTH_28
DDE superfamily endonuclease
Winged helix-turn helix
Homeodomain-like domain
Homeodomain-like domain
Helix-turn-helix domain
5.90E-23
2.20E-12
3.80E-12
4.10E-11
4.10E-08
WP_037452083.1 1553029 1553806 + 258PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.70E-30
3.90E-11
5.30E-07
8.30E-04
WP_014332494.1 1553845 1554613 + 255PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
3.20E-58
6.50E-08
WP_014332495.1 1554688 1555411 + 240PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.10E-18
WP_037452079.1 1555420 1556110 + 229PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.20E-10

Results for WP_009232838.1 [Actinomyces sp. oral taxon 849 str. F0330] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009232829.1 447107 446981 - 41NO PFAM MATCH---
WP_009232830.1 447320 448316 + 331PF00756
PF10518
Esterase
TAT_signal
Putative esterase
TAT (twin-arginine translocation) pathway signal sequence
9.60E-44
5.70E-04
WP_009232831.1 448841 448448 - 130PF00702Hydrolasehaloacid dehalogenase-like hydrolase5.30E-07
WP_009232832.1 450765 449098 - 556PF00122
PF00403
E1-E2_ATPase
HMA
E1-E2 ATPase
Heavy-metal-associated domain
8.60E-51
3.70E-12
WP_009232833.1 451102 450832 - 89PF00403HMAHeavy-metal-associated domain6.40E-13
WP_009232834.1 451469 451187 - 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor3.30E-32
WP_017194138.1 451639 452220 + 193INFERRED GENE---
WP_009232837.1 453721 452962 - 252PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
9.20E-22
7.20E-15
3.00E-04
WP_009232838.1 453987 455343 + 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-60
WP_009232839.1 455409 456138 + 242NO PFAM MATCH---
WP_017177813.1 456139 456397 + 86INFERRED GENE---
HMPREF0975_RS03920 457586 458138 + 184INFERRED GENE---
WP_009232842.1 458333 458537 + 67NO PFAM MATCH---
WP_232212453.1 458645 459851 + 401PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)1.40E-05
HMPREF0975_RS03935 459997 460856 + 286INFERRED GENE---

Results for WP_007745654.1 [Oenococcus kitaharae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007745645.1 242956 244945 + 662PF00587
PF03129
PF02824
PF07973
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA synthetase class II core domain (G, H, P, S and T)
Anticodon binding domain
TGS domain
Threonyl and Alanyl tRNA synthetase second additional domain
1.50E-33
3.20E-21
3.40E-09
1.20E-07
WP_007745646.1 244941 246282 + 446PF03051
PF00112
Peptidase_C1_2
Peptidase_C1
Peptidase C1-like family
Papain family cysteine protease
1.10E-185
2.30E-07
WP_007745647.1 246531 247719 + 395PF02353
PF13649
PF08241
PF08242
PF13489
CMAS
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Mycolic acid cyclopropane synthetase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.60E-95
3.10E-11
2.20E-10
2.80E-10
4.80E-08
WP_007745648.1 247879 248413 + 177NO PFAM MATCH---
WP_007745649.1 248903 249845 + 313PF00005
PF13304
PF02463
PF13175
PF03193
ABC_tran
AAA_21
SMC_N
AAA_15
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
RsgA GTPase
7.40E-25
4.20E-14
1.20E-05
1.60E-04
6.80E-04
WP_148126054.1 249953 250634 + 226NO PFAM MATCH---
WP_007745651.1 250922 251825 + 300PF00881NitroreductaseNitroreductase family2.10E-08
WP_007745653.1 251844 252843 + 332NO PFAM MATCH---
WP_007745654.1 252839 254219 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-47
WP_028291897.1 254654 254312 - 113NO PFAM MATCH---
WP_007745659.1 255593 255083 - 169PF00239
PF02796
Resolvase
HTH_7
Resolvase, N terminal domain
Helix-turn-helix domain of resolvase
5.60E-27
3.40E-04
WP_007745660.1 256015 256777 + 253NO PFAM MATCH---
WP_007745662.1 256965 257241 + 91NO PFAM MATCH---
WP_007745664.1 257365 259432 + 688PF03389
PF18208
MobA_MobL
NES_C_h
MobA/MobL family
Nicking enzyme C-terminal middle helical domain
3.90E-85
2.90E-34
WP_007745666.1 259504 259792 + 95PF04221RelBRelB antitoxin1.20E-07
WP_007745667.1 259795 260110 + 104PF15738YafQ_toxinBacterial toxin of type II toxin-antitoxin system, YafQ2.40E-18
WP_028291898.1 260255 260870 + 204NO PFAM MATCH---

Results for WP_007451953.1 [Streptomyces sp. W007] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_073740161.1 371 206 - 54PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.90E-09
WP_032792059.1 611 2249 + 545PF01494
PF01266
PF02254
FAD_binding_3
DAO
TrkA_N
FAD binding domain
FAD dependent oxidoreductase
TrkA-N domain
1.10E-64
2.20E-04
5.30E-04
WP_032792061.1 3032 2291 - 246PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.30E-07
8.00E-06
WP_007451944.1 3983 3065 - 305PF00005
PF13304
PF02463
PF13558
ABC_tran
AAA_21
SMC_N
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
SbcC/RAD50-like, Walker B motif
5.90E-32
1.40E-15
9.20E-07
7.30E-04
WP_063739558.1 5005 3982 - 340PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.10E-39
WP_007451948.1 5448 5019 - 142PF00881NitroreductaseNitroreductase family3.40E-06
WP_237725683.1 6500 5453 - 348NO PFAM MATCH---
WP_007451953.1 8514 6582 - 643PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-62
WP_050987751.1 10324 8506 - 605NO PFAM MATCH---
WP_007451956.1 12846 10320 - 841NO PFAM MATCH---
WP_007451957.1 13988 12842 - 381NO PFAM MATCH---
WP_237725684.1 14303 15041 + 245PF13649
PF08241
PF13489
PF08242
PF05401
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
NodS
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Nodulation protein S (NodS)
1.20E-15
6.70E-15
2.10E-10
7.10E-09
1.70E-07

Results for WP_006819304.1 [Yokenella regensburgei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_161615796.1 320946 323388 + 813PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.50E-110
1.30E-26
8.30E-18
WP_006819297.1 323398 324016 + 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.40E-27
8.20E-13
1.10E-12
2.00E-12
6.00E-11
WP_161615797.1 324017 324881 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)5.70E-107
WP_038258849.1 325151 326309 + 385PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
3.50E-28
6.50E-13
1.50E-06
3.80E-05
WP_006819300.1 326523 327942 + 472PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
4.60E-29
1.70E-14
WP_006819301.1 328734 327993 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.70E-32
8.50E-19
2.90E-06
WP_006819302.1 331223 328940 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.70E-207
5.30E-44
WP_038258598.1 332132 331274 - 285PF01226Form_Nir_transFormate/nitrite transporter1.00E-74
WP_006819304.1 334298 332531 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-82
1.00E-67
WP_006819305.1 334586 335672 + 361PF00266Aminotran_5Aminotransferase class-V6.90E-70
WP_038258595.1 335742 337026 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-147
WP_161615798.1 337212 337896 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.30E-84
1.20E-07
2.10E-04
8.30E-04
9.60E-04
WP_006819308.1 338020 339694 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.50E-99
1.20E-11
6.70E-07
WP_006819309.1 339847 340132 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.70E-29
6.80E-08
1.00E-04
WP_161615799.1 340337 342602 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.60E-45
5.00E-17
4.10E-07
5.40E-04
WP_038258586.1 342638 344387 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
9.40E-60
1.50E-35
1.40E-09
3.60E-06
2.70E-04
WP_006819312.1 344383 345367 + 327PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.30E-117

Results for WP_007456056.1 [Streptomyces anulatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_266422518.1 3230947 3228574 - 790PF13181
PF08238
PF07719
PF00515
PF13424
TPR_8
Sel1
TPR_2
TPR_1
TPR_12
Tetratricopeptide repeat
Sel1 repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
9.10E-13
1.90E-11
1.60E-10
2.10E-10
6.40E-08
WP_007456043.1 3231996 3230988 - 335PF03819
PF01503
MazG
PRA-PH
MazG nucleotide pyrophosphohydrolase domain
Phosphoribosyl-ATP pyrophosphohydrolase
1.10E-26
2.20E-05
WP_007456045.1 3232563 3232704 + 46NO PFAM MATCH---
WP_266422522.1 3232788 3233586 + 265NO PFAM MATCH---
WP_032793484.1 3233659 3234337 + 225NO PFAM MATCH---
WP_139062018.1 3234333 3235539 + 401NO PFAM MATCH---
WP_007456052.1 3235535 3236717 + 393PF00675Peptidase_M16Insulinase (Peptidase family M16)5.40E-05
WP_032793486.1 3236881 3238078 + 398PF00067p450Cytochrome P4507.60E-24
WP_007456056.1 3238163 3239357 + 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-75
WP_007456058.1 3239409 3240834 + 474PF07812TfuATfuA-like protein9.00E-46
WP_266422530.1 3241629 3240972 - 218PF13624
PF13623
SurA_N_3
SurA_N_2
SurA N-terminal domain
SurA N-terminal domain
1.20E-10
2.60E-07
WP_007456061.1 3243408 3241770 - 545PF00069
PF07714
PF03109
PF13424
PF01636
Pkinase
PK_Tyr_Ser-Thr
ABC1
TPR_12
APH
Protein kinase domain
Protein tyrosine and serine/threonine kinase
ABC1 atypical kinase-like domain
Tetratricopeptide repeat
Phosphotransferase enzyme family
9.00E-43
5.30E-32
9.90E-06
1.50E-05
1.30E-04
WP_266422533.1 3244016 3243404 - 203NO PFAM MATCH---
WP_266422536.1 3246446 3244115 - 776PF02384N6_MtaseN-6 DNA Methylase2.30E-24
WP_266574966.1 3246654 3247383 + 242NO PFAM MATCH---
WP_266428695.1 3248009 3247418 - 196PF00857IsochorismataseIsochorismatase family2.10E-39
WP_007456073.1 3248800 3248053 - 248NO PFAM MATCH---

Results for WP_008163062.1 [Achromobacter arsenitoxydans SY8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008163054.1 250 1021 + 256PF15607Ntox44Bacterial toxin 442.20E-23
WP_139026513.1 1017 1419 + 133NO PFAM MATCH---
WP_139026514.1 1488 1884 + 131NO PFAM MATCH---
WP_202946586.1 2689 1900 - 262PF00881NitroreductaseNitroreductase family3.90E-12
WP_008163062.1 3999 2694 - 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-36
WP_008163063.1 4526 3995 - 176NO PFAM MATCH---
WP_008163064.1 5374 4549 - 274NO PFAM MATCH---
WP_008163065.1 5408 6080 + 223PF14378PAP2_3PAP2 superfamily3.80E-07
WP_008163067.1 7904 6350 - 517PF04293SpoVRSpoVR like protein7.70E-171
WP_008163068.1 9160 7900 - 419PF04285DUF444Protein of unknown function (DUF444)2.10E-167
WP_008163070.1 11098 9172 - 641PF08298
PF06798
AAA_PrkA
PrkA
PrkA AAA domain
PrkA serine protein kinase C-terminal domain
6.30E-174
4.20E-71
WP_139026515.1 11621 11873 + 83NO PFAM MATCH---
WP_043518380.1 13094 11942 - 383PF01872
PF00383
PF14437
PF18785
RibD_C
dCMP_cyt_deam_1
MafB19-deam
Inv-AAD
RibD C-terminal domain
Cytidine and deoxycytidylate deaminase zinc-binding region
MafB19-like deaminase
Invertebrate-AID/APOBEC-deaminase
3.40E-44
1.80E-19
9.70E-10
2.10E-05

Results for WP_003533828.1 [Sinorhizobium meliloti] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003533813.1 13570 12817 - 250PF03740PdxJPyridoxal phosphate biosynthesis protein PdxJ5.70E-75
WP_003533815.1 13765 14476 + 236PF05988
PF00578
DUF899
AhpC-TSA
Bacterial protein of unknown function (DUF899)
AhpC/TSA family
1.20E-64
3.50E-04
WP_127517011.1 14706 15813 + 368NO PFAM MATCH---
WP_003533819.1 16142 16382 + 79PF05433Rick_17kDa_AntiGlycine zipper 2TM domain3.20E-05
WP_003533820.1 16399 16753 + 117PF13405
PF13202
PF00036
PF13499
PF13833
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand domain
EF hand
EF hand
EF-hand domain pair
EF-hand domain pair
1.50E-14
1.10E-13
2.20E-13
1.30E-10
6.50E-08
WP_003533822.1 17479 16783 - 231NO PFAM MATCH---
WP_127517010.1 18685 17500 - 394NO PFAM MATCH---
WP_003533825.1 19501 18718 - 260PF07812TfuATfuA-like protein2.20E-41
WP_003533828.1 20738 19508 - 409PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-47
WP_164817929.1 23796 20721 - 1024PF13191
PF00211
PF13401
PF01637
AAA_16
Guanylate_cyc
AAA_22
ATPase_2
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
ATPase domain predominantly from Archaea
3.50E-18
8.80E-09
1.00E-04
4.30E-04
WP_127517008.1 24188 26090 + 633PF01734PatatinPatatin-like phospholipase3.20E-19
WP_003533834.1 27270 26142 - 375PF13604
PF13538
PF13245
PF01443
PF05970
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
PIF1
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Viral (Superfamily 1) RNA helicase
PIF1-like helicase
7.70E-27
3.50E-18
9.10E-15
1.10E-09
4.80E-09
WP_127517007.1 27520 28609 + 362PF05145AbrBTransition state regulatory protein AbrB7.20E-87
WP_003533838.1 28975 28615 - 119PF13412
PF01047
PF12802
PF08279
PF19187
HTH_24
MarR
MarR_2
HTH_11
HTH_PafC
Winged helix-turn-helix DNA-binding
MarR family
MarR family
HTH domain
PafC helix-turn-helix domain
1.10E-05
4.70E-05
5.40E-05
1.20E-04
2.70E-04
WP_013844631.1 28971 29225 + 84INFERRED GENE---
WP_003533842.1 29459 29834 + 124PF03640Lipoprotein_15Secreted repeat of unknown function2.10E-34
WP_003533844.1 29817 30372 + 184PF08281
PF04542
PF04545
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
4.00E-14
2.40E-10
8.30E-09

Results for WP_003534185.1 [Sinorhizobium meliloti] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_127517674.1 16918 16624 - 97PF06296RelERelE toxin of RelE / RelB toxin-antitoxin system1.50E-09
WP_003534198.1 17447 17084 - 120PF00903
PF12681
PF18029
PF19581
Glyoxalase
Glyoxalase_2
Glyoxalase_6
Glyoxalase_7
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
Glyoxalase-like domain
Glyoxalase superfamily protein
9.00E-12
5.50E-09
4.70E-08
5.20E-05
WP_003534197.1 18040 17443 - 198PF00440TetR_NBacterial regulatory proteins, tetR family1.60E-17
WP_003534196.1 18124 18916 + 263PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.00E-61
3.20E-46
WP_003534194.1 19448 18968 - 159PF08592Anthrone_oxyAnthrone oxygenase3.80E-13
WP_003534193.1 20811 19497 - 437PF10091GlycoamylasePutative glucoamylase2.50E-62
WP_013844664.1 21045 21840 + 264PF06707DUF1194Protein of unknown function (DUF1194)1.30E-77
WP_013844665.1 22395 22161 - 77NO PFAM MATCH---
WP_003534185.1 23734 22519 - 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-67
WP_010969830.1 23946 23730 - 71NO PFAM MATCH---
WP_003534181.1 25790 23963 - 608PF07719
PF13414
PF14559
TPR_2
TPR_11
TPR_19
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
1.40E-07
2.30E-05
7.70E-04
WP_003534177.1 26347 27172 + 274PF02522Antibiotic_NATAminoglycoside 3-N-acetyltransferase1.60E-55
WP_234835851.1 27811 27454 - 118PF13508
PF13527
PF00583
PF13673
PF14542
Acetyltransf_7
Acetyltransf_9
Acetyltransf_1
Acetyltransf_10
Acetyltransf_CG
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
1.70E-08
2.90E-08
6.60E-07
1.60E-06
9.40E-04
WP_003534173.1 28285 28048 - 78NO PFAM MATCH---
WP_127517673.1 28408 29038 + 209NO PFAM MATCH---
WP_234841763.1 29153 29519 + 121PF06877RraBRegulator of ribonuclease activity B3.00E-08
WP_003534165.1 29646 29985 + 112NO PFAM MATCH---

Results for WP_008839445.1 [Mesorhizobium alhagi CCNWXJ12-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008839435.1 33245 31961 - 427PF00589Phage_integrasePhage integrase family4.90E-11
WP_202946710.1 33715 34081 + 121NO PFAM MATCH---
WP_008839437.1 34077 34287 + 69NO PFAM MATCH---
WP_008839438.1 34276 35113 + 278PF01936
PF12872
NYN
OST-HTH
NYN domain
OST-HTH/LOTUS domain
6.40E-27
1.50E-07
WP_008839439.1 36837 35682 - 384PF07394DUF1501Protein of unknown function (DUF1501)9.60E-20
WP_008839440.1 38171 36827 - 447PF00082Peptidase_S8Subtilase family3.50E-22
WP_139044065.1 38337 38916 + 192NO PFAM MATCH---
WP_040588399.1 40662 38934 - 575PF07719
PF00515
PF00211
PF13431
PF13414
TPR_2
TPR_1
Guanylate_cyc
TPR_17
TPR_11
Tetratricopeptide repeat
Tetratricopeptide repeat
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
TPR repeat
3.20E-12
7.50E-10
3.50E-09
3.10E-08
4.90E-08
WP_008839445.1 40829 42068 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-52
WP_139044066.1 42810 42384 - 141NO PFAM MATCH---
WP_139044067.1 44199 44709 + 169NO PFAM MATCH---
WP_008839449.1 45011 45764 + 250NO PFAM MATCH---
WP_008839450.1 45763 46102 + 112NO PFAM MATCH---
WP_015314879.1 46369 46742 + 124INFERRED GENE---
WP_008839451.1 51729 47004 - 1574PF04851
PF00271
PF00270
ResIII
Helicase_C
DEAD
Type III restriction enzyme, res subunit
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
1.60E-17
2.10E-11
5.40E-11
WP_008839452.1 55408 51772 - 1211PF13604
PF13245
PF13538
PF13086
PF01443
AAA_30
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Viral (Superfamily 1) RNA helicase
7.20E-30
3.20E-22
1.60E-13
2.30E-09
5.90E-08
WP_008839453.1 55807 55501 - 101NO PFAM MATCH---

Results for WP_009096656.1 [Halomonas sp. GFAJ-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009096642.1 16424 15392 - 343PF04952
PF17033
AstE_AspA
Peptidase_M99
Succinylglutamate desuccinylase / Aspartoacylase family
Carboxypeptidase controlling helical cell shape catalytic
8.20E-62
7.70E-04
WP_009096643.1 17653 16453 - 399PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
1.20E-26
1.40E-17
WP_009096644.1 17923 18859 + 311PF02826
PF03446
PF02558
2-Hacid_dh_C
NAD_binding_2
ApbA
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
Ketopantoate reductase PanE/ApbA
1.40E-44
2.70E-06
2.40E-05
WP_009096645.1 18933 19680 + 248NO PFAM MATCH---
WP_009096647.1 19680 20613 + 310PF03956Lys_exportLysine exporter LysO1.20E-52
WP_009096650.1 20697 21927 + 409PF07670GateNucleoside recognition7.10E-11
WP_035539967.1 21990 23223 + 410PF11902DUF3422Protein of unknown function (DUF3422)9.00E-111
WP_009096654.1 23471 24341 + 289PF00892EamAEamA-like transporter family1.70E-33
WP_009096656.1 26599 24415 - 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.20E-76
2.00E-75
3.50E-09
WP_009096657.1 28020 26703 - 438PF00696
PF00583
PF13508
AA_kinase
Acetyltransf_1
Acetyltransf_7
Amino acid kinase family
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
3.00E-20
1.80E-09
1.70E-06
WP_009096659.1 29440 28174 - 421PF01384PHO4Phosphate transporter family1.20E-113
WP_009096661.1 30130 29449 - 226PF01865PhoU_divProtein of unknown function DUF474.00E-55
WP_009096664.1 30266 31166 + 299PF01928CYTHCYTH domain3.10E-28
WP_009096666.1 31196 32084 + 295PF00520
PF07885
Ion_trans
Ion_trans_2
Ion transport protein
Ion channel
3.90E-29
9.60E-16
WP_009096667.1 32917 32140 - 258PF03767Acid_phosphat_BHAD superfamily, subfamily IIIB (Acid phosphatase)4.40E-29
WP_009096669.1 33796 33172 - 207PF01300Sua5_yciO_yrdCTelomere recombination5.10E-43
WP_035539988.1 34806 33876 - 309PF02811PHPPHP domain2.40E-11

Results for WP_005579199.1 [Aggregatibacter actinomycetemcomitans RhAA1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005579181.1 354882 355851 + 322PF03895YadA_anchorYadA-like membrane anchor domain1.10E-13
WP_005579182.1 357627 355953 - 557PF00005
PF13304
PF12848
PF02463
PF01926
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
MMR_HSR1
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
1.70E-58
1.30E-16
3.40E-16
2.30E-07
3.30E-06
WP_005579186.1 358006 358675 + 222PF06226DUF1007Protein of unknown function (DUF1007)1.60E-48
WP_005579188.1 358690 359725 + 344PF03824NicOHigh-affinity nickel-transport protein3.50E-48
WP_005579190.1 360336 362379 + 680PF17757
PF12344
PF00271
PF04851
PF02151
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
UvrB interaction domain
Ultra-violet resistance protein B
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
UvrB/uvrC motif
2.80E-34
5.30E-21
6.60E-19
1.80E-11
3.20E-08
WP_005579192.1 362605 363676 + 356PF01389
PF00691
PF13505
OmpA_membrane
OmpA
OMP_b-brl
OmpA-like transmembrane domain
OmpA family
Outer membrane protein beta-barrel domain
2.30E-62
4.30E-25
6.80E-18
WP_005579195.1 365260 363877 - 460PF13365
PF00595
PF13180
PF17820
PF02163
Trypsin_2
PDZ
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
PDZ domain
PDZ domain
PDZ domain
Peptidase family M50
3.10E-31
5.20E-30
5.80E-24
1.50E-23
1.60E-23
WP_005579197.1 365861 365450 - 136PF06295DUF1043Protein of unknown function (DUF1043)7.30E-43
WP_005579199.1 367793 366029 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.70E-78
2.20E-64
WP_005579200.1 369089 367883 - 401PF20511
PF07883
PMI_typeI_cat
Cupin_2
Phosphomannose isomerase type I, catalytic domain
Cupin domain
2.60E-30
6.30E-04
WP_005579202.1 369264 369603 + 112PF07411DUF1508Domain of unknown function (DUF1508)1.90E-39
WP_005579204.1 369795 371289 + 497PF02378
PF00367
PTS_EIIC
PTS_EIIB
Phosphotransferase system, EIIC
phosphotransferase system, EIIB
1.40E-78
5.50E-13
WP_005579206.1 372045 371346 - 232PF08241
PF13489
PF13649
PF13847
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.90E-09
1.20E-05
1.10E-04
3.60E-04
WP_005579208.1 372065 372767 + 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.10E-17
1.30E-15
3.70E-05
WP_005579211.1 372957 374262 + 434PF05201
PF01488
PF00745
GlutR_N
Shikimate_DH
GlutR_dimer
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
3.70E-48
2.70E-44
2.30E-20
WP_005579213.1 374323 375547 + 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
7.40E-67
1.10E-05
WP_005579214.1 376926 376281 - 214PF00406
PF13207
PF05191
PF17213
ADK
AAA_17
ADK_lid
Hydin_ADK
Adenylate kinase
AAA domain
Adenylate kinase, active site lid
Hydin Adenylate kinase-like domain
8.00E-59
6.20E-23
1.20E-15
4.00E-05

Results for WP_008968489.1 [Bradyrhizobium sp. STM 3843] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008968480.1 2758 751 - 668PF02786
PF00289
PF02785
PF02222
PF00364
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Biotin_lipoyl
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
ATP-grasp domain
Biotin-requiring enzyme
1.80E-74
1.10E-44
4.50E-38
1.90E-13
1.10E-12
WP_008968481.1 4368 2760 - 535PF01039
PF06833
Carboxyl_trans
MdcE
Carboxyl transferase domain
Malonate decarboxylase gamma subunit (MdcE)
7.80E-149
2.30E-05
WP_008968483.1 4723 5368 + 214PF17932
PF00440
PF17938
PF17935
PF08359
TetR_C_24
TetR_N
TetR_C_29
TetR_C_27
TetR_C_4
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
YsiA-like protein, C-terminal region
2.20E-33
1.70E-11
4.80E-06
5.80E-05
7.60E-05
WP_008968484.1 5375 5861 + 161PF01037
PF13412
PF13404
PF12840
PF12802
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
MarR_2
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Helix-turn-helix domain
MarR family
5.70E-17
9.80E-17
6.90E-15
2.50E-05
5.20E-05
WP_008968485.1 6226 5920 - 101PF04800NDUS4NADH dehydrogenase ubiquinone Fe-S protein 42.20E-38
WP_008968486.1 6449 7595 + 381PF10129OpgC_COpgC protein6.00E-135
WP_008968487.1 8513 7610 - 300PF18029
PF00903
Glyoxalase_6
Glyoxalase
Glyoxalase-like domain
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
2.30E-17
1.20E-14
WP_175361096.1 9007 8509 - 165NO PFAM MATCH---
WP_008968489.1 9399 11670 + 756PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-93
WP_008968490.1 11677 13198 + 506PF00881NitroreductaseNitroreductase family3.70E-18
WP_008968491.1 13315 13720 + 134NO PFAM MATCH---
WP_201768846.1 14274 14611 + 112NO PFAM MATCH---

Results for WP_015452278.1 [Azoarcus sp. KH32C] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015452270.1 688314 688014 - 99PF01845CcdBCcdB protein1.60E-30
WP_015452271.1 688559 688313 - 81PF07362CcdAPost-segregation antitoxin CcdA2.20E-26
WP_015452272.1 689628 688758 - 289NO PFAM MATCH---
WP_015452273.1 691189 689830 - 452NO PFAM MATCH---
WP_015452274.1 693472 691333 - 712PF01968
PF05378
PF19278
Hydantoinase_A
Hydant_A_N
Hydant_A_C
Hydantoinase/oxoprolinase
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase C-terminal domain
2.00E-85
1.30E-42
3.00E-15
WP_015452275.1 695247 693495 - 583PF02538Hydantoinase_BHydantoinase B/oxoprolinase1.20E-151
WP_015452276.1 695694 696123 + 142PF01152Bac_globinBacterial-like globin1.30E-15
WP_015452277.1 696177 696558 + 126PF05610DUF779Protein of unknown function (DUF779)7.30E-30
WP_015452278.1 696735 698940 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.00E-74
3.30E-73
6.00E-08
WP_015452279.1 700300 698986 - 437PF13167
PF16360
PF01926
PF02421
PF03193
GTP-bdg_N
GTP-bdg_M
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP-binding GTPase N-terminal
GTP-binding GTPase Middle Region
50S ribosome-binding GTPase
Ferrous iron transport protein B
RsgA GTPase
3.00E-31
4.60E-19
9.30E-19
2.50E-09
6.60E-05
WP_015452280.1 700720 700381 - 112PF00072Response_regResponse regulator receiver domain1.90E-17
WP_015452281.1 700845 701970 + 374PF02518
PF00512
PF14361
HATPase_c
HisKA
RsbRD_N
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
RsbT co-antagonist protein rsbRD N-terminal domain
1.30E-20
3.30E-09
2.00E-07
WP_015452282.1 702595 702010 - 194PF02630
PF00578
PF08534
SCO1-SenC
AhpC-TSA
Redoxin
SCO1/SenC
AhpC/TSA family
Redoxin
5.60E-19
7.10E-07
1.50E-04
WP_231874605.1 703323 702591 - 243PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.20E-28
WP_231874622.1 704799 703383 - 471PF07732
PF07731
PF13442
PF00034
Cu-oxidase_3
Cu-oxidase_2
Cytochrome_CBB3
Cytochrom_C
Multicopper oxidase
Multicopper oxidase
Cytochrome C oxidase, cbb3-type, subunit III
Cytochrome c
2.90E-13
4.00E-10
1.60E-08
5.10E-08
WP_015452285.1 706791 705360 - 476PF00171AldedhAldehyde dehydrogenase family1.50E-155
WP_015452286.1 707007 706800 - 68NO PFAM MATCH---

Results for WP_003340796.1 [Brevibacillus laterosporus GI-9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003340780.1 43510 42757 - 250PF06778Chlor_dismutaseChlorite dismutase1.30E-67
WP_003334684.1 44653 43693 - 319PF00485PRKPhosphoribulokinase / Uridine kinase family8.00E-12
WP_003340785.1 44832 45180 + 115NO PFAM MATCH---
WP_035318416.1 47021 45176 - 614PF00496
PF12793
SBP_bac_5
SgrR_N
Bacterial extracellular solute-binding proteins, family 5 Middle
Sugar transport-related sRNA regulator N-term
4.80E-31
1.60E-23
WP_003340789.1 47204 48539 + 444PF07690
PF05977
PF12832
PF00083
PF03825
MFS_1
MFS_3
MFS_1_like
Sugar_tr
Nuc_H_symport
Major Facilitator Superfamily
Transmembrane secretion effector
MFS_1 like family
Sugar (and other) transporter
Nucleoside H+ symporter
1.00E-42
8.50E-13
9.50E-10
4.20E-08
1.00E-04
WP_003340791.1 48618 48909 + 96PF12823DUF3817Domain of unknown function (DUF3817)1.50E-25
WP_003340792.1 49143 50331 + 395PF09587PGA_capBacterial capsule synthesis protein PGA_cap3.70E-76
WP_003340794.1 52416 50835 - 526PF00881NitroreductaseNitroreductase family4.60E-15
WP_003340796.1 54382 52438 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-85
WP_003340798.1 56316 54378 - 645NO PFAM MATCH---
WP_003340801.1 57388 57073 - 104PF02899Phage_int_SAM_1Phage integrase, N-terminal SAM-like domain2.50E-06
WP_003334674.1 58221 57810 - 136PF00293NUDIXNUDIX domain2.80E-20
WP_003340806.1 58610 59018 + 135PF01381
PF12844
PF13560
PF13022
PF13443
HTH_3
HTH_19
HTH_31
HTH_Tnp_1_2
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix of insertion element transposase
Cro/C1-type HTH DNA-binding domain
1.50E-18
9.80E-12
3.50E-08
8.00E-05
9.00E-05
WP_003340808.1 59299 59128 - 56PF08863YolDYolD-like protein4.10E-05
WP_003340810.1 59408 59255 - 50PF08863YolDYolD-like protein4.10E-05
WP_003340814.1 60659 59612 - 348NO PFAM MATCH---
WP_003334667.1 60747 60954 + 68NO PFAM MATCH---

Results for WP_003771347.1 [Listeria innocua] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_198249342.1 640354 639172 - 393PF04740LXGLXG domain of WXG superfamily1.80E-10
WP_003771362.1 640457 641489 + 343PF11185DUF2971Protein of unknown function (DUF2971)2.20E-10
WP_003771359.1 642337 641647 - 229NO PFAM MATCH---
WP_003771358.1 642975 642384 - 196NO PFAM MATCH---
WP_003771356.1 643771 646540 + 922PF13271DUF4062Domain of unknown function (DUF4062)8.80E-04
WP_033838101.1 647583 647226 - 118PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily5.20E-06
WP_003771351.1 648421 647647 - 257PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.00E-13
7.10E-13
WP_232357687.1 649125 648666 - 152PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.70E-08
WP_003771347.1 650560 649246 - 437PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-32
WP_033838227.1 651470 650552 - 305NO PFAM MATCH---
WP_003771343.1 652353 651477 - 291PF00881NitroreductaseNitroreductase family5.50E-11
WP_003771342.1 652667 652349 - 105PF19388DUF5963Family of unknown function (DUF5963)7.50E-25
WP_003771341.1 653457 652707 - 249PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.90E-14
1.80E-05
WP_003771339.1 654344 653456 - 295PF00005
PF02463
PF13304
PF13476
PF13555
ABC_tran
SMC_N
AAA_21
AAA_23
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
P-loop containing region of AAA domain
1.50E-21
5.30E-11
1.30E-04
3.40E-04
7.40E-04
WP_087942094.1 654558 654408 - 49NO PFAM MATCH---
WP_077916460.1 656404 654847 - 518PF00958
PF00117
PF07722
PF02540
PF01171
GMP_synt_C
GATase
Peptidase_C26
NAD_synthase
ATP_bind_3
GMP synthase C terminal domain
Glutamine amidotransferase class-I
Peptidase C26
NAD synthase
PP-loop family
2.40E-45
8.10E-44
3.10E-11
1.20E-09
1.50E-04
WP_033533168.1 656937 656532 - 134PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit4.70E-10

Results for WP_003597810.1 [Methylorubrum sp. GM97] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003597797.1 2888229 2890065 + 611PF00920ILVD_EDDDehydratase family3.60E-214
WP_261925668.1 2890354 2891365 + 336PF07755
PF17396
DUF1611
DUF1611_N
Domain of unknown function (DUF1611_C) P-loop domain
Domain of unknown function (DUF1611_N) Rossmann-like domain
9.80E-67
1.20E-22
WP_003597800.1 2891378 2892359 + 326PF13378
PF02746
MR_MLE_C
MR_MLE_N
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
1.10E-27
6.80E-10
WP_261925669.1 2893352 2892368 - 327PF01464
PF19489
SLT
SLT_4
Transglycosylase SLT domain
Transglycosylase SLT domain
1.70E-06
7.70E-04
WP_238506392.1 2893847 2894996 + 382PF07994
PF01658
NAD_binding_5
Inos-1-P_synth
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase
2.10E-58
1.10E-32
WP_261925670.1 2895008 2895929 + 306NO PFAM MATCH---
WP_003597807.1 2895960 2897142 + 393PF08241
PF13489
PF13649
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.80E-08
3.70E-08
5.10E-07
WP_012753102.1 2897141 2898170 + 342PF01408
PF02894
GFO_IDH_MocA
GFO_IDH_MocA_C
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
8.70E-25
4.50E-17
WP_003597810.1 2898361 2899981 + 539PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-55
WP_003597811.1 2899977 2900871 + 297PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.80E-33
WP_003597812.1 2900867 2902106 + 412PF00534
PF13692
PF13579
PF13439
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
9.20E-32
1.10E-28
3.50E-15
1.80E-14
2.10E-11
WP_012753103.1 2902102 2902864 + 253PF02585PIG-LGlcNAc-PI de-N-acetylase6.00E-18
WP_012753104.1 2902847 2903474 + 208PF03167UDGUracil DNA glycosylase superfamily5.60E-10
WP_261925671.1 2903685 2904717 + 343PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region4.30E-11
WP_012753105.1 2904740 2906033 + 430PF02518
PF00512
PF08448
PF00989
PF13188
HATPase_c
HisKA
PAS_4
PAS
PAS_8
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS fold
PAS fold
PAS domain
2.60E-26
2.00E-17
3.80E-08
1.20E-06
5.90E-06
WP_012753106.1 2906233 2908732 + 832PF00122
PF00702
PF00403
PF12710
PF08282
E1-E2_ATPase
Hydrolase
HMA
HAD
Hydrolase_3
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
4.10E-56
1.00E-46
1.90E-29
5.60E-08
2.20E-05
WP_003605161.1 2908728 2909193 + 154PF13411
PF09278
PF00376
MerR_1
MerR-DNA-bind
MerR
MerR HTH family regulatory protein
MerR, DNA binding
MerR family regulatory protein
1.40E-18
1.20E-17
5.50E-17

Results for WP_009499975.1 [Haemophilus sp. oral taxon 851 str. F0397] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009499965.1 41670 41304 - 121NO PFAM MATCH---
WP_009499966.1 42333 41682 - 216PF08238
PF13432
PF07719
PF13176
Sel1
TPR_16
TPR_2
TPR_7
Sel1 repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.90E-39
3.40E-09
5.40E-04
6.00E-04
WP_009499967.1 42581 44630 + 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
2.80E-166
6.00E-24
5.80E-15
1.50E-12
4.90E-10
WP_009499969.1 44741 45602 + 286PF03848
PF09313
PF13649
PF08241
PF13847
TehB
DUF1971
Methyltransf_25
Methyltransf_11
Methyltransf_31
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.30E-115
4.00E-32
1.40E-11
1.90E-09
2.20E-09
WP_032803275.1 46368 45651 - 238PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
7.10E-15
2.80E-11
1.20E-06
WP_009499971.1 46401 47100 + 232PF08241
PF13649
Methyltransf_11
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
1.20E-07
3.00E-04
WP_009499972.1 47903 47096 - 268PF13649
PF08241
PF13847
PF08242
PF05175
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
MTS
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase small domain
4.80E-10
1.70E-07
2.70E-07
6.10E-06
9.00E-06
WP_009499973.1 48132 48609 + 158NO PFAM MATCH---
WP_009499975.1 48745 50509 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-80
1.20E-63
WP_009499978.1 50836 53479 + 880PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
3.60E-149
2.30E-78
WP_009499979.1 54621 53544 - 358PF00561Abhydrolase_1alpha/beta hydrolase fold6.00E-54
WP_032803276.1 54778 55459 + 226PF02698DUF218DUF218 domain2.30E-14
WP_009499981.1 56008 58867 + 952PF03797
PF18883
Autotransporter
AC_1
Autotransporter beta-domain
Autochaperone Domain Type 1
1.40E-35
3.60E-08
WP_032803277.1 60231 58926 - 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
1.00E-12
4.60E-04
WP_009499983.1 61123 60232 - 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
3.30E-15
4.80E-12
WP_009499984.1 61326 62718 + 463PF00595
PF13365
PF13180
PF17820
PF02163
PDZ
Trypsin_2
PDZ_2
PDZ_6
Peptidase_M50
PDZ domain
Trypsin-like peptidase domain
PDZ domain
PDZ domain
Peptidase family M50
1.50E-32
2.60E-32
3.70E-26
6.80E-24
3.10E-22
WP_032803278.1 66214 62773 - 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.30E-29
1.50E-25
2.10E-24
1.80E-20
8.20E-20

Results for WP_008049738.1 [Limnospira indica PCC 8005] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008049714.1 42239 42899 + 219PF05685Uma2Putative restriction endonuclease1.30E-27
WP_008049716.1 42927 43218 + 96PF01909
PF18765
NTP_transf_2
Polbeta
Nucleotidyltransferase domain
Polymerase beta, Nucleotidyltransferase
3.00E-11
9.10E-10
WP_008049718.1 43214 43559 + 114PF01934HepT-likeRibonuclease HepT-like2.50E-24
WP_008049719.1 43671 43857 + 61PF03693ParD_antitoxinBacterial antitoxin of ParD toxin-antitoxin type II system and RHH8.80E-06
WP_008049721.1 44415 46350 + 644PF00082
PF18065
PF18047
Peptidase_S8
PatG_C
PatG_D
Subtilase family
PatG C-terminal
PatG Domain
9.90E-38
6.10E-37
1.10E-19
WP_006624746.1 46441 46657 + 71NO PFAM MATCH---
WP_245394280.1 46708 46927 + 72NO PFAM MATCH---
WP_008049736.1 47690 47057 - 210PF05685Uma2Putative restriction endonuclease6.40E-27
WP_008049738.1 47751 50046 + 764PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-101
WP_008049742.1 50657 50834 + 58PF19155DUF5837Family of unknown function (DUF5837)1.00E-22

Results for WP_007451546.1 [Streptomyces sp. SID5477] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007451529.1 17071 16888 - 60NO PFAM MATCH---
WP_007451531.1 17302 17122 - 59NO PFAM MATCH---
WP_202482811.1 17490 17343 - 48NO PFAM MATCH---
WP_007451535.1 17735 17561 - 57NO PFAM MATCH---
WP_007451537.1 17955 17769 - 61NO PFAM MATCH---
WP_007451539.1 18766 17992 - 257PF00881NitroreductaseNitroreductase family1.60E-10
WP_161337089.1 20322 18762 - 519PF00881NitroreductaseNitroreductase family4.80E-04
WP_007451543.1 21056 20420 - 211NO PFAM MATCH---
WP_007451546.1 22420 21064 - 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.60E-63
WP_007451559.1 23349 24243 + 297PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.40E-18
2.80E-15
2.20E-06
WP_007451550.1 25455 24258 - 398PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
1.20E-40
6.10E-19
WP_237557223.1 26555 25481 - 357PF20182DUF6545Family of unknown function (DUF6545)2.80E-23
WP_237557224.1 26938 26614 - 107NO PFAM MATCH---
WP_042826545.1 27906 28791 + 294PF02481
PF18306
DNA_processg_A
LDcluster4
DNA recombination-mediator protein A
SLOG cluster4 family
3.70E-58
5.70E-05
WP_237557225.1 28991 29555 + 187NO PFAM MATCH---
WP_007451506.1 30596 29769 - 274PF00775Dioxygenase_CDioxygenase6.30E-19

Results for WP_006158135.1 [Cupriavidus basilensis OR16] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005012280.1 0 189 + 63INFERRED GENE---
OR16_RS11470 344 1588 + 414INFERRED GENE---
WP_006158130.1 3709 1819 - 629PF00005
PF08352
PF02463
PF13401
PF13191
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_16
ABC transporter
Oligopeptide/dipeptide transporter, C-terminal region
RecF/RecN/SMC N terminal domain
AAA domain
AAA ATPase domain
3.90E-59
1.40E-19
4.60E-09
1.60E-08
1.40E-07
WP_006158131.1 4745 3791 - 317PF01112Asparaginase_2Asparaginase2.00E-113
WP_237717033.1 5700 4665 - 344PF01380
PF01418
SIS
HTH_6
SIS domain
Helix-turn-helix domain, rpiR family
5.70E-16
2.30E-13
WP_006158133.1 6074 7754 + 559PF00005
PF12848
PF13304
PF02463
PF13555
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
ABC transporter
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.40E-45
6.30E-29
3.70E-14
2.40E-10
5.80E-08
WP_081488755.1 7790 8036 + 81PF13103TonB_2TonB C terminal2.00E-13
WP_006158135.1 8247 10452 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.80E-71
6.80E-71
4.20E-07
WP_237717028.1 10600 11620 + 339PF08282Hydrolase_3haloacid dehalogenase-like hydrolase5.50E-06
WP_006158137.1 12965 11978 - 328PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.70E-38
2.70E-18
WP_006158138.1 13131 14451 + 439PF07690MFS_1Major Facilitator Superfamily2.10E-46
WP_006158139.1 14548 16063 + 504PF07364
PF07171
DUF1485
MlrC_C
Metallopeptidase family M81
MlrC C-terminus
3.40E-100
5.50E-56
WP_237717029.1 16588 16264 - 107PF01844
PF14279
HNH
HNH_5
HNH endonuclease
HNH endonuclease
2.20E-05
4.20E-04
WP_006158141.1 17152 17710 + 185PF00132
PF14602
Hexapep
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
6.70E-12
6.70E-09
WP_006158142.1 19426 19747 + 106NO PFAM MATCH---
WP_006158143.1 19760 20432 + 223PF01835MG2MG2 domain1.80E-04

Results for WP_002986920.1 [Myroides odoratus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002986904.1 358449 357945 - 167PF00583
PF13673
PF13508
PF13420
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_4
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
3.00E-13
9.40E-13
8.70E-10
6.50E-06
1.30E-05
WP_002986906.1 359982 358596 - 461PF00883Peptidase_M17Cytosol aminopeptidase family, catalytic domain2.40E-108
WP_002986908.1 360898 360079 - 272NO PFAM MATCH---
WP_036462573.1 361022 363875 + 950PF02347GDC-PGlycine cleavage system P-protein2.50E-180
WP_002986913.1 365890 363958 - 643PF07715PlugTonB-dependent Receptor Plug Domain5.40E-04
WP_002986914.1 366935 365873 - 353NO PFAM MATCH---
WP_002986915.1 367798 366931 - 288PF00881NitroreductaseNitroreductase family2.40E-16
WP_002986918.1 368586 367794 - 263NO PFAM MATCH---
WP_002986920.1 369878 368597 - 426PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-55
WP_002986921.1 370753 369874 - 292NO PFAM MATCH---
WP_002986923.1 372108 373032 + 307PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.00E-18
2.80E-10
WP_002986924.1 373127 374324 + 398PF07690MFS_1Major Facilitator Superfamily1.30E-40
WP_002986925.1 374433 375345 + 303PF00892EamAEamA-like transporter family5.80E-38
WP_002986926.1 376811 375341 - 489NO PFAM MATCH---
WP_002986927.1 376947 377802 + 284PF00535
PF13641
PF13506
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family group 2
2.80E-18
2.60E-13
5.30E-05
8.00E-04
WP_002986928.1 377869 378616 + 248PF02405MlaEPermease MlaE1.40E-58
WP_002986929.1 378620 379394 + 257PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
5.10E-32
3.80E-06
1.60E-04

Results for WP_014293205.1 [Oceanimonas sp. GK1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014293197.1 2976923 2977682 + 252PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
7.70E-62
5.20E-39
2.60E-08
WP_014293198.1 2977729 2978539 + 269PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family5.10E-24
WP_014293199.1 2979311 2978618 - 230PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.10E-19
WP_014293200.1 2980055 2979314 - 246PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.40E-22
WP_014293201.1 2981029 2980252 - 258PF00497
PF10613
PF18231
SBP_bac_3
Lig_chan-Glu_bd
DUF5603
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
Domain of unknown function (DUF5603)
1.40E-63
3.30E-10
1.30E-04
WP_014293202.1 2981829 2981061 - 255PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
4.20E-30
7.70E-12
3.00E-06
3.70E-04
WP_014293203.1 2982241 2983153 + 303PF03956Lys_exportLysine exporter LysO9.80E-54
WP_014293204.1 2983286 2984390 + 367PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.10E-60
6.00E-26
WP_014293205.1 2984841 2986596 + 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-80
2.90E-67
WP_014293206.1 2987589 2986860 - 242PF01323
PF13462
PF13098
PF18312
PF13743
DSBA
Thioredoxin_4
Thioredoxin_2
ScsC_N
Thioredoxin_5
DSBA-like thioredoxin domain
Thioredoxin
Thioredoxin-like domain
Copper resistance protein ScsC N-terminal domain
Thioredoxin
6.80E-23
1.50E-22
1.40E-15
3.60E-06
7.00E-04
WP_014293207.1 2988362 2987732 - 209PF01891CbiMCobalt uptake substrate-specific transmembrane region4.10E-14
WP_014293208.1 2988621 2989569 + 315PF16868
PF12974
PF09084
NMT1_3
Phosphonate-bd
NMT1
NMT1-like family
ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1/THI5 like
1.20E-92
9.10E-08
2.00E-06
WP_014293209.1 2989665 2991681 + 671PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component1.80E-86
WP_237711150.1 2991638 2992061 + 140PF08905DUF1850Domain of unknown function (DUF1850)7.10E-25
WP_014293211.1 2992057 2993815 + 585PF02518
PF02743
PF00512
PF10883
HATPase_c
dCache_1
HisKA
DUF2681
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Cache domain
His Kinase A (phospho-acceptor) domain
Protein of unknown function (DUF2681)
4.00E-15
1.70E-09
1.20E-05
2.80E-04
WP_014293212.1 2993795 2995118 + 440PF00158
PF00072
PF14532
PF02954
PF07728
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
2.20E-61
1.90E-26
1.30E-22
5.20E-11
3.60E-06
WP_014293213.1 2995836 2995134 - 233PF11306DUF3108Protein of unknown function (DUF3108)1.70E-20

Results for WP_014677373.1 [Streptomyces hygroscopicus subsp. jinggangensis TL01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
SHJGH_RS50715 9771420 9771642 + 74INFERRED GENE---
WP_005142312.1 9771976 9772708 + 244INFERRED GENE---
WP_014677367.1 9773852 9773138 - 237PF19380DUF5955Family of unknown function (DUF5955)2.50E-04
WP_250848911.1 9774451 9773896 - 184NO PFAM MATCH---
WP_200866721.1 9775068 9774531 - 178PF06441EHNEpoxide hydrolase N terminus7.60E-12
WP_250848912.1 9775549 9777451 + 633NO PFAM MATCH---
WP_250848913.1 9777443 9779174 + 576PF00881NitroreductaseNitroreductase family1.40E-14
WP_014677372.1 9779335 9779518 + 60NO PFAM MATCH---
WP_014677373.1 9779633 9781670 + 678PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-75
WP_014677374.1 9781684 9784312 + 875PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.40E-38
WP_014677375.1 9784283 9785309 + 341PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.70E-54
WP_014677376.1 9785305 9786541 + 411PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.00E-43
WP_250848914.1 9789410 9786611 - 932PF13191
PF00196
PF13401
AAA_16
GerE
AAA_22
AAA ATPase domain
Bacterial regulatory proteins, luxR family
AAA domain
3.20E-14
8.40E-13
1.00E-04
WP_014044646.1 9789874 9790289 + 138INFERRED GENE---
WP_250848915.1 9790427 9790574 + 48NO PFAM MATCH---
WP_014677378.1 9790976 9790574 - 133NO PFAM MATCH---
WP_229888049.1 9791636 9791300 - 111PF07110EthDEthD domain2.90E-17

Results for WP_006118620.1 [Pantoea stewartii subsp. stewartii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_151160719.1 0 96 + 31PF13817DDE_Tnp_IS66_CIS66 C-terminal element6.20E-07
WP_006118620.1 2023 259 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-83
2.90E-66
WP_006118621.1 2333 3419 + 361PF00266Aminotran_5Aminotransferase class-V3.50E-64
WP_006118622.1 3499 4786 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.70E-151
WP_006118623.1 4975 5656 + 226PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
1.10E-83
2.70E-08
2.80E-05
4.70E-05
5.50E-04
WP_006118624.1 5777 7451 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.10E-99
6.00E-13
5.40E-07
WP_003849360.1 7533 7818 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_014593324.1 8019 10275 + 752INFERRED GENE---
WP_006118628.1 10309 12058 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
1.30E-59
1.40E-35
4.00E-10
1.60E-06
1.20E-04
WP_006118629.1 12054 13056 + 333PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase2.40E-118

Results for WP_006676102.1 [Paenibacillus dendritiformis C454] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006676094.1 10854 11904 + 349PF00326
PF12146
PF02129
PF01738
PF20434
Peptidase_S9
Hydrolase_4
Peptidase_S15
DLH
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
X-Pro dipeptidyl-peptidase (S15 family)
Dienelactone hydrolase family
BD-FAE
3.60E-12
7.20E-12
6.20E-10
1.00E-05
3.80E-04
WP_000502337.1 12159 12300 + 47INFERRED GENE---
WP_238535307.1 13282 12346 - 311PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.40E-08
WP_006676097.1 13921 13294 - 208PF13346ABC2_membrane_5ABC-2 family transporter protein3.60E-25
WP_006676098.1 14792 13913 - 292PF00005
PF13304
PF13175
PF13555
PF13401
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
P-loop containing region of AAA domain
AAA domain
1.20E-29
6.00E-15
1.60E-07
5.00E-04
7.30E-04
WP_040730674.1 15172 14788 - 127PF00392
PF14502
GntR
HTH_41
Bacterial regulatory proteins, gntR family
Helix-turn-helix domain
4.50E-17
5.00E-04
WP_138985618.1 15549 16032 + 160NO PFAM MATCH---
WP_006676101.1 17707 16114 - 530PF00881NitroreductaseNitroreductase family2.90E-11
WP_006676102.1 19701 17751 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.00E-86
WP_040730677.1 21656 19697 - 652NO PFAM MATCH---
WP_006676104.1 26630 22721 - 1302PF00150CellulaseCellulase (glycosyl hydrolase family 5)2.10E-27
WP_006676105.1 27877 26905 - 323PF01619Pro_dhProline dehydrogenase4.40E-19
WP_238535308.1 28275 27954 - 106PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.30E-22
2.10E-13
WP_238535309.1 28766 28247 - 172PF02311
PF07883
AraC_binding
Cupin_2
AraC-like ligand binding domain
Cupin domain
2.60E-16
5.60E-04
WP_006676106.1 30503 29210 - 430PF01381
PF13443
PF12844
PF13560
HTH_3
HTH_26
HTH_19
HTH_31
Helix-turn-helix
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
Helix-turn-helix domain
1.40E-08
5.80E-08
2.10E-05
3.50E-05
WP_006676108.1 32088 30696 - 463PF00135
PF07859
PF20434
COesterase
Abhydrolase_3
BD-FAE
Carboxylesterase family
alpha/beta hydrolase fold
BD-FAE
8.10E-75
5.50E-14
3.90E-13
WP_006676109.1 32315 33059 + 247PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.70E-14

Results for WP_004068676.1 [Pyrococcus furiosus DSM 3638] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244949829.1 1866627 1866051 - 191NO PFAM MATCH---
WP_014835502.1 1867421 1866827 - 197PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-08
3.10E-06
1.60E-05
WP_011013209.1 1867790 1868606 + 271PF01061ABC2_membraneABC-2 type transporter3.40E-08
WP_011013210.1 1868609 1868894 + 94PF12802
PF13412
PF01978
PF01047
PF03965
MarR_2
HTH_24
TrmB
MarR
Penicillinase_R
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
MarR family
Penicillinase repressor
1.80E-07
1.80E-06
2.40E-06
2.80E-06
2.50E-05
WP_011013211.1 1870654 1868899 - 584PF01433Peptidase_M1Peptidase family M1 domain1.40E-13
WP_004068689.1 1872130 1870711 - 472PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-16
1.20E-08
1.50E-08
WP_004068683.1 1874397 1872627 - 589PF01433Peptidase_M1Peptidase family M1 domain1.00E-14
WP_004068677.1 1875395 1874561 - 277PF00881NitroreductaseNitroreductase family2.20E-30
WP_004068676.1 1876711 1875406 - 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.70E-58
WP_004068674.1 1877808 1876707 - 366PF00899
PF01488
ThiF
Shikimate_DH
ThiF family
Shikimate / quinate 5-dehydrogenase
3.90E-19
1.40E-05
WP_223208989.1 1878426 1877820 - 201NO PFAM MATCH---
WP_004068668.1 1879394 1878590 - 267PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.80E-21
5.80E-12
9.00E-05
WP_020953572.1 1879599 1879440 - 52NO PFAM MATCH---
WP_011011118.1 1879775 1880768 + 330PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.90E-23
5.00E-10
4.90E-04
WP_011011119.1 1880931 1882419 + 495PF01637
PF13173
PF13191
PF13412
PF04471
ATPase_2
AAA_14
AAA_16
HTH_24
Mrr_cat
ATPase domain predominantly from Archaea
AAA domain
AAA ATPase domain
Winged helix-turn-helix DNA-binding
Restriction endonuclease
3.60E-12
3.40E-11
2.10E-10
1.70E-05
2.40E-05
WP_011011120.1 1882521 1883016 + 164PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
3.80E-16
2.80E-08
8.80E-05
WP_011011121.1 1883005 1883698 + 230PF00899
PF03435
ThiF
Sacchrp_dh_NADP
ThiF family
Saccharopine dehydrogenase NADP binding domain
1.70E-59
6.60E-04

Results for WP_007600322.1 [Rhizobium sp. PDO1-076] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007600306.1 12438 11982 - 151NO PFAM MATCH---
WP_244426393.1 13062 15714 + 883PF01580
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.30E-64
2.00E-28
4.10E-24
1.60E-05
WP_007600310.1 16392 15861 - 176PF06186DUF992Protein of unknown function (DUF992)3.10E-48
WP_007600312.1 22160 16697 - 1820PF20080
PF13443
PF15335
PF14261
ALTTAQ_rpt
HTH_26
CAAP1
DUF4351
ALTTAQ repeat
Cro/C1-type HTH DNA-binding domain
Caspase activity and apoptosis inhibitor 1
Domain of unknown function (DUF4351)
0.00E+00
3.50E-09
9.30E-09
1.10E-04
WP_141649855.1 23233 22918 - 104NO PFAM MATCH---
WP_007600316.1 23705 23279 - 141PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
5.90E-12
1.20E-07
1.60E-05
3.00E-04
WP_007600318.1 24984 23814 - 389NO PFAM MATCH---
WP_007600320.1 25709 24980 - 242PF07812TfuATfuA-like protein5.20E-37
WP_007600322.1 26899 25705 - 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-54
WP_007600324.1 27368 26936 - 143NO PFAM MATCH---
WP_244426385.1 29258 27380 - 625PF03704
PF13414
BTAD
TPR_11
Bacterial transcriptional activator domain
TPR repeat
6.10E-11
2.70E-05
WP_007600329.1 29495 29954 + 152NO PFAM MATCH---
WP_007600331.1 30304 30622 + 105NO PFAM MATCH---
WP_007600333.1 30671 31331 + 219PF01625PMSRPeptide methionine sulfoxide reductase1.20E-60
WP_007600335.1 31584 32577 + 330PF02608BmpABC transporter substrate-binding protein PnrA-like5.80E-55
WP_007600340.1 32641 34162 + 506PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
7.00E-48
3.70E-05
3.00E-04
WP_007600346.1 34169 35273 + 367PF02653BPD_transp_2Branched-chain amino acid transport system / permease component2.40E-27

Results for WP_002463078.1 [Atlantibacter hermannii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002463064.1 2646778 2645029 - 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.70E-59
6.10E-36
7.50E-09
4.30E-05
1.00E-04
WP_002463066.1 2649076 2646814 - 753PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.20E-46
4.40E-18
2.60E-05
5.40E-05
WP_002463068.1 2649561 2649276 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.10E-29
1.10E-07
1.60E-04
WP_002463070.1 2651325 2649651 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.50E-99
4.80E-12
1.70E-07
WP_002463072.1 2652122 2651435 - 228PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
6.30E-85
5.20E-08
1.40E-06
7.00E-05
WP_002463073.1 2653592 2652305 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.40E-152
WP_002463075.1 2654749 2653663 - 361PF00266Aminotran_5Aminotransferase class-V1.40E-69
WP_002463077.1 2655603 2654910 - 230PF04239DUF421Protein of unknown function (DUF421)8.40E-16
WP_002463078.1 2655741 2657505 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.80E-84
1.80E-67
WP_002463079.1 2657909 2658767 + 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-73
WP_002463080.1 2658816 2661099 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.70E-208
1.80E-43
WP_002463081.1 2661600 2662386 + 261PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.40E-32
1.20E-18
1.50E-06
WP_002463082.1 2663585 2662436 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.40E-27
7.60E-10
1.10E-05
WP_002463083.1 2665173 2663880 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.50E-37
3.40E-33
WP_002463085.1 2666607 2665263 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
2.60E-64
4.30E-24
1.00E-16
5.50E-14
1.10E-06
WP_002463087.1 2667227 2666615 - 203PF03548LolAOuter membrane lipoprotein carrier protein LolA3.00E-57
WP_002463089.1 2671149 2667387 - 1253PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.00E-75
2.30E-41
1.20E-28
5.50E-28
6.20E-05

Results for WP_014371853.1 [Paenibacillus mucilaginosus K02] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013919918.1 7054557 7053678 - 292PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-11
WP_014652435.1 7055529 7054572 - 318PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.60E-14
WP_013919920.1 7056580 7055755 - 274PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.30E-17
WP_187296797.1 7057472 7056572 - 299PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.90E-16
WP_014371850.1 7058901 7057602 - 432PF13416SBP_bac_8Bacterial extracellular solute-binding protein7.80E-38
WP_014371851.1 7060875 7059090 - 594PF06580
PF02743
PF00672
PF02518
PF13581
His_kinase
dCache_1
HAMP
HATPase_c
HATPase_c_2
Histidine kinase
Cache domain
HAMP domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
4.50E-22
2.20E-11
1.30E-08
4.60E-05
9.10E-04
WP_013919924.1 7062441 7060896 - 514PF00072
PF12833
PF00165
Response_reg
HTH_18
HTH_AraC
Response regulator receiver domain
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.40E-24
2.20E-19
1.30E-18
WP_014652436.1 7064254 7062700 - 517PF00881NitroreductaseNitroreductase family4.30E-10
WP_014371853.1 7066263 7064319 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-84
WP_014652437.1 7068188 7066259 - 642NO PFAM MATCH---
WP_241484650.1 7068586 7068286 - 99NO PFAM MATCH---
B2K_RS39485 7068545 7068749 + 68INFERRED GENE---
WP_013919929.1 7069624 7069093 - 176PF04978
PF12867
PF05163
DUF664
DinB_2
DinB
Protein of unknown function (DUF664)
DinB superfamily
DinB family
1.10E-15
6.00E-14
2.90E-06
WP_014652439.1 7070591 7069850 - 246PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.50E-53
8.90E-52
3.20E-14
WP_014371856.1 7071001 7070590 - 136PF14552
PF01361
Tautomerase_2
Tautomerase
Tautomerase enzyme
Tautomerase enzyme
2.40E-36
3.40E-19
WP_014371857.1 7071163 7072075 + 303PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-44
1.90E-19
WP_013919934.1 7073969 7072199 - 589PF06580
PF02743
PF02518
PF00672
His_kinase
dCache_1
HATPase_c
HAMP
Histidine kinase
Cache domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
8.90E-21
7.50E-12
5.90E-10
1.20E-08

Results for WP_014397424.1 [Corallococcus coralloides DSM 2259] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014397418.1 5829263 5826848 - 804PF08448
PF02518
PF00512
PF13426
PF00989
PAS_4
HATPase_c
HisKA
PAS_9
PAS
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS domain
PAS fold
9.20E-30
4.40E-22
2.10E-09
4.20E-08
5.00E-07
WP_014397419.1 5829696 5829264 - 143PF00072Response_regResponse regulator receiver domain6.00E-18
WP_167594364.1 5829995 5830697 + 233PF02518
PF00512
PF13581
HATPase_c
HisKA
HATPase_c_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
7.80E-21
5.80E-09
9.10E-05
COCOR_RS44765 5830723 5831947 + 408INFERRED GENE---
WP_082010996.1 5831933 5832200 + 89INFERRED GENE---
WP_237726742.1 5832121 5833243 + 373PF02518
PF00072
PF00512
HATPase_c
Response_reg
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
3.70E-31
4.60E-25
7.30E-04
WP_167594366.1 5833728 5833257 - 156PF12158DUF3592Protein of unknown function (DUF3592)1.30E-14
WP_014397423.1 5835429 5833755 - 557PF09286
PF00082
Pro-kuma_activ
Peptidase_S8
Pro-kumamolisin, activation domain
Subtilase family
2.40E-14
8.30E-06
WP_014397424.1 5835524 5837717 + 730PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-94
WP_014397425.1 5837720 5839673 + 650PF04055
PF13282
PF02310
Radical_SAM
DUF4070
B12-binding
Radical SAM superfamily
Domain of unknown function (DUF4070)
B12 binding domain
1.30E-10
2.60E-10
5.30E-04
WP_014397426.1 5839676 5840834 + 385PF04909Amidohydro_2Amidohydrolase1.90E-31
WP_014397427.1 5840844 5842242 + 465PF00881NitroreductaseNitroreductase family1.90E-05
WP_014397428.1 5842674 5842260 - 137NO PFAM MATCH---
WP_043323562.1 5846767 5842675 - 1363PF00069
PF07714
PF13191
PF00211
PF13401
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Guanylate_cyc
AAA_22
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
6.60E-47
3.60E-27
7.80E-26
1.20E-09
1.60E-05
WP_014397430.1 5848569 5846775 - 597PF00498
PF02518
PF01590
PF16697
PF13492
FHA
HATPase_c
GAF
Yop-YscD_cpl
GAF_3
FHA domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAF domain
Inner membrane component of T3SS, cytoplasmic domain
GAF domain
4.60E-19
7.60E-18
1.60E-14
5.50E-14
8.70E-14
WP_014397431.1 5849204 5848643 - 186PF01583
PF13671
PF01656
PF00005
PF06414
APS_kinase
AAA_33
CbiA
ABC_tran
Zeta_toxin
Adenylylsulphate kinase
AAA domain
CobQ/CobB/MinD/ParA nucleotide binding domain
ABC transporter
Zeta toxin
2.10E-56
8.10E-09
2.70E-05
2.20E-04
2.50E-04
WP_014397432.1 5850480 5849214 - 421PF00009
PF01926
PF03144
GTP_EFTU
MMR_HSR1
GTP_EFTU_D2
Elongation factor Tu GTP binding domain
50S ribosome-binding GTPase
Elongation factor Tu domain 2
8.80E-42
5.30E-07
9.30E-05

Results for WP_014393068.1 [Corallococcus coralloides DSM 2259] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_148282158.1 245220 246015 + 264NO PFAM MATCH---
WP_014393062.1 246893 246017 - 291PF00561
PF12697
PF12146
PF03096
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Ndr
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Ndr family
2.90E-26
2.70E-19
2.10E-06
9.50E-04
WP_014393063.1 247436 246998 - 145PF07719
PF13432
PF00515
PF13424
PF14559
TPR_2
TPR_16
TPR_1
TPR_12
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.80E-14
1.70E-10
4.00E-10
9.70E-09
4.00E-08
WP_148282159.1 247485 247683 + 65NO PFAM MATCH---
WP_237726513.1 247778 248402 + 207PF15579Imm52Immunity protein 524.20E-34
WP_014393065.1 249143 248384 - 252PF02585PIG-LGlcNAc-PI de-N-acetylase8.20E-17
WP_014393066.1 250426 249139 - 428PF13692
PF00534
PF13579
PF13439
PF13524
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
1.00E-28
2.00E-28
4.10E-16
1.40E-15
1.80E-11
WP_014393067.1 251274 250422 - 283PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.60E-39
WP_014393068.1 252753 251277 - 491PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-73
WP_014393069.1 253583 252749 - 277NO PFAM MATCH---
WP_014393070.1 254608 253573 - 344PF01408
PF02894
PF03435
GFO_IDH_MocA
GFO_IDH_MocA_C
Sacchrp_dh_NADP
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
Saccharopine dehydrogenase NADP binding domain
2.10E-24
8.10E-15
9.80E-04
WP_014393071.1 255563 254630 - 310NO PFAM MATCH---
WP_014393072.1 256794 255567 - 408PF07994
PF01658
NAD_binding_5
Inos-1-P_synth
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase
2.30E-62
4.70E-31
WP_237726514.1 258348 256995 - 450PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
1.60E-58
1.20E-05
WP_014393074.1 258526 259720 + 397PF00534
PF13692
PF13439
PF13579
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
1.40E-25
2.30E-24
8.00E-13
2.60E-10
1.60E-06
WP_014393075.1 260874 259650 - 407PF13692
PF00534
PF13439
PF13579
PF13524
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
4.20E-22
5.30E-20
2.60E-16
3.20E-14
4.50E-09
WP_014393076.1 262148 260927 - 406PF00132HexapepBacterial transferase hexapeptide (six repeats)3.40E-09

Results for WP_014398464.1 [Corallococcus coralloides DSM 2259] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014398456.1 7119337 7118059 - 425PF00375SDFSodium:dicarboxylate symporter family8.40E-120
WP_014398457.1 7119408 7120047 + 212PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamily5.90E-04
WP_043323855.1 7120799 7120025 - 257PF01555N6_N4_MtaseDNA methylase4.10E-14
WP_052313090.1 7120880 7121651 + 256NO PFAM MATCH---
WP_014398460.1 7121695 7122553 + 285PF11876DUF3396Protein of unknown function (DUF3396)3.10E-62
WP_083892199.1 7123476 7122567 - 302PF09544DUF2381Protein of unknown function (DUF2381)6.60E-35
WP_014398462.1 7125473 7123595 - 625PF00069
PF07714
PF01636
PF06293
Pkinase
PK_Tyr_Ser-Thr
APH
Kdo
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
1.50E-21
1.20E-09
5.70E-07
4.70E-04
WP_014398463.1 7127021 7125851 - 389PF07812TfuATfuA-like protein9.10E-42
WP_014398464.1 7128262 7127107 - 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-58
WP_014398465.1 7128383 7128860 + 158PF00578
PF08534
AhpC-TSA
Redoxin
AhpC/TSA family
Redoxin
5.00E-33
4.80E-21
WP_014398466.1 7129010 7129583 + 190PF04542
PF08281
PF04545
PF00196
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma-70 region 2
Sigma-70, region 4
Sigma-70, region 4
Bacterial regulatory proteins, luxR family
1.30E-15
7.00E-14
1.80E-09
8.60E-05
WP_014398467.1 7129582 7130125 + 180PF13490zf-HC2Putative zinc-finger4.00E-05
WP_052313220.1 7130130 7130619 + 162NO PFAM MATCH---
WP_014398469.1 7130745 7131321 + 191PF13590DUF4136Domain of unknown function (DUF4136)2.60E-28
WP_014398470.1 7132475 7131329 - 381NO PFAM MATCH---
WP_193352513.1 7133118 7132557 - 186PF00255
PF00578
GSHPx
AhpC-TSA
Glutathione peroxidase
AhpC/TSA family
5.00E-35
1.80E-05
WP_014398472.1 7138456 7133152 - 1767PF00005
PF13304
PF17760
PF13555
PF02463
ABC_tran
AAA_21
UvrA_inter
AAA_29
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
UvrA interaction domain
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
1.10E-41
3.40E-21
8.20E-21
6.30E-18
5.50E-17

Results for WP_015689618.1 [Rahnella sp. CG8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_217244256.1 137507 136517 - 329PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.90E-116
WP_013574837.1 139252 137503 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
3.20E-61
3.30E-35
5.40E-10
5.10E-05
5.50E-05
WP_250980740.1 141537 139290 - 748PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.60E-53
7.20E-14
3.00E-08
WP_013574835.1 142093 141808 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.80E-28
4.00E-07
WP_015689619.1 143827 142153 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.90E-98
1.00E-11
4.10E-07
WP_153375073.1 144682 143983 - 232PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.20E-81
7.70E-07
2.50E-05
1.10E-04
WP_217244307.1 146162 144878 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.30E-150
WP_037036024.1 147352 146266 - 361PF00266Aminotran_5Aminotransferase class-V1.90E-67
WP_015689618.1 147677 149441 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-82
3.30E-65
WP_013574829.1 149939 150797 + 285PF01226Form_Nir_transFormate/nitrite transporter1.40E-74
WP_095922617.1 150872 153155 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.20E-205
1.50E-43
WP_015689580.1 153427 154168 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.30E-29
2.80E-18
5.90E-06
WP_013574786.1 155419 154273 - 381PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
3.30E-34
8.40E-09
1.80E-08
4.00E-06
WP_112151144.1 156125 155552 - 190PF00037
PF12837
PF12838
PF14697
PF13187
Fer4
Fer4_6
Fer4_7
Fer4_21
Fer4_9
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
3.20E-17
4.70E-13
2.20E-12
7.70E-12
4.10E-11
WP_112151145.1 156733 156124 - 202PF02613Nitrate_red_delNitrate reductase delta subunit7.90E-25
WP_013574783.1 157660 156802 - 285PF04976DmsCDMSO reductase anchor subunit (DmsC)1.70E-98
WP_013574782.1 158279 157661 - 205PF13247
PF00037
PF12797
PF13187
PF12837
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
2.30E-27
6.30E-13
1.20E-12
3.10E-12
2.90E-11

Results for WP_014420827.1 [Marinobacter nauticus ATCC 49840] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041654588.1 1091385 1091952 + 188PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.60E-08
WP_011785654.1 1091992 1092331 + 112PF03831
PF08274
PF08271
YjdM
YjdM_Zn_Ribbon
TF_Zn_Ribbon
PhnA domain
PhnA Zinc-Ribbon
TFIIB zinc-binding
8.30E-35
1.70E-15
1.50E-04
WP_014420820.1 1093096 1092376 - 239PF04391
PF05099
DUF533
TerB
Protein of unknown function (DUF533)
Tellurite resistance protein TerB
4.10E-59
8.20E-04
WP_014420822.1 1093332 1095639 + 768PF00563
PF00990
PF02743
EAL
GGDEF
dCache_1
EAL domain
Diguanylate cyclase, GGDEF domain
Cache domain
1.80E-70
9.40E-37
1.80E-04
WP_014420823.1 1095705 1096209 + 167PF04314PCuACCopper chaperone PCu(A)C6.10E-36
WP_014420824.1 1096985 1096241 - 247PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.80E-12
1.60E-10
5.00E-10
4.30E-07
5.80E-06
WP_014420825.1 1097404 1097125 - 92PF10262RdxRdx family1.90E-30
WP_014420826.1 1097486 1098380 + 297PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
4.40E-18
1.60E-17
WP_014420827.1 1100569 1098376 - 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-79
2.10E-68
4.80E-09
WP_014420828.1 1100593 1100827 + 77NO PFAM MATCH---
WP_014420829.1 1101664 1100830 - 277PF06167Peptidase_M90Glucose-regulated metallo-peptidase M909.50E-86
WP_011785641.1 1102126 1101706 - 139PF00582UspUniversal stress protein family3.60E-14
WP_014420830.1 1102211 1102535 + 107PF03992ABMAntibiotic biosynthesis monooxygenase3.20E-07
WP_014420831.1 1103507 1102535 - 323PF12706
PF00753
PF13691
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
tRNase Z endonuclease
7.30E-13
7.10E-12
3.90E-05
WP_011785638.1 1103578 1104433 + 284PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.50E-39
8.20E-23
WP_014420832.1 1104436 1105018 + 193PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.90E-18
WP_014420833.1 1105138 1105615 + 158PF14539DUF4442Domain of unknown function (DUF4442)4.70E-22

Results for WP_014371853.1 [Paenibacillus mucilaginosus K02] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013919918.1 7054557 7053678 - 292PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-11
WP_014652435.1 7055529 7054572 - 318PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.60E-14
WP_013919920.1 7056580 7055755 - 274PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.30E-17
WP_187296797.1 7057472 7056572 - 299PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.90E-16
WP_014371850.1 7058901 7057602 - 432PF13416SBP_bac_8Bacterial extracellular solute-binding protein7.80E-38
WP_014371851.1 7060875 7059090 - 594PF06580
PF02743
PF00672
PF02518
PF13581
His_kinase
dCache_1
HAMP
HATPase_c
HATPase_c_2
Histidine kinase
Cache domain
HAMP domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
4.50E-22
2.20E-11
1.30E-08
4.60E-05
9.10E-04
WP_013919924.1 7062441 7060896 - 514PF00072
PF12833
PF00165
Response_reg
HTH_18
HTH_AraC
Response regulator receiver domain
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.40E-24
2.20E-19
1.30E-18
WP_014652436.1 7064254 7062700 - 517PF00881NitroreductaseNitroreductase family4.30E-10
WP_014371853.1 7066263 7064319 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-84
WP_014652437.1 7068188 7066259 - 642NO PFAM MATCH---
WP_241484650.1 7068586 7068286 - 99NO PFAM MATCH---
B2K_RS39485 7068545 7068749 + 68INFERRED GENE---
WP_013919929.1 7069624 7069093 - 176PF04978
PF12867
PF05163
DUF664
DinB_2
DinB
Protein of unknown function (DUF664)
DinB superfamily
DinB family
1.10E-15
6.00E-14
2.90E-06
WP_014652439.1 7070591 7069850 - 246PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.50E-53
8.90E-52
3.20E-14
WP_014371856.1 7071001 7070590 - 136PF14552
PF01361
Tautomerase_2
Tautomerase
Tautomerase enzyme
Tautomerase enzyme
2.40E-36
3.40E-19
WP_014371857.1 7071163 7072075 + 303PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-44
1.90E-19
WP_013919934.1 7073969 7072199 - 589PF06580
PF02743
PF02518
PF00672
His_kinase
dCache_1
HATPase_c
HAMP
Histidine kinase
Cache domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
8.90E-21
7.50E-12
5.90E-10
1.20E-08

Results for WP_014437285.1 [Phycisphaera mikurensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014437293.1 308145 308952 + 268PF04784DUF547Protein of unknown function, DUF5471.70E-17
WP_053230130.1 310303 308980 - 440PF02601
PF13742
PF01336
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Exonuclease VII, large subunit
OB-fold nucleic acid binding domain
OB-fold nucleic acid binding domain
7.50E-76
2.20E-24
2.70E-07
WP_041378777.1 310959 310323 - 211PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.10E-17
WP_083855124.1 311824 310972 - 283PF13531
PF01547
SBP_bac_11
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.40E-22
2.00E-07
WP_014437289.1 311909 313100 + 396PF01761
PF13685
PF00465
DHQ_synthase
Fe-ADH_2
Fe-ADH
3-dehydroquinate synthase
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
2.00E-62
1.60E-05
7.20E-04
WP_014437288.1 313096 314044 + 315NO PFAM MATCH---
WP_014437287.1 314040 315063 + 340PF01408
PF02894
GFO_IDH_MocA
GFO_IDH_MocA_C
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
7.10E-22
1.10E-11
WP_014437286.1 315189 316035 + 281NO PFAM MATCH---
WP_014437285.1 316027 317500 + 490PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-56
WP_014437284.1 317570 318791 + 406PF13692
PF00534
PF13579
PF13439
PF13524
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
2.10E-27
6.50E-24
2.90E-19
1.00E-18
5.50E-10
WP_260401005.1 318757 319483 + 241PF02585PIG-LGlcNAc-PI de-N-acetylase6.60E-14
WP_154661842.1 320532 319521 - 336PF14315DUF4380Domain of unknown function (DUF4380)4.90E-11
WP_083855123.1 323398 320581 - 938PF00128
PF16561
PF02922
PF16760
PF16657
Alpha-amylase
AMPK1_CBM
CBM_48
CBM53
Malt_amylase_C
Alpha amylase, catalytic domain
Glycogen recognition site of AMP-activated protein kinase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Starch/carbohydrate-binding module (family 53)
Maltogenic Amylase, C-terminal domain
1.80E-45
2.50E-22
3.20E-10
1.80E-07
3.60E-06
WP_014437280.1 324481 323431 - 349PF13377
PF00532
PF00356
PF13407
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Bacterial regulatory proteins, lacI family
Periplasmic binding protein domain
2.10E-35
3.00E-19
2.40E-16
1.70E-08
WP_014437278.1 324828 325773 + 314PF07963N_methylProkaryotic N-terminal methylation motif6.40E-08
WP_014437277.1 325877 326513 + 211PF07589PEP-CTERMPEP-CTERM motif4.80E-06
WP_014437276.1 326617 327511 + 297PF07589PEP-CTERMPEP-CTERM motif9.60E-06

Results for WP_014642915.1 [Halobacillus halophilus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041601289.1 1665889 1665697 - 63PF08141SspHSmall acid-soluble spore protein H family1.60E-23
WP_014642907.1 1667024 1665971 - 350PF13685
PF00465
PF01761
Fe-ADH_2
Fe-ADH
DHQ_synthase
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
3-dehydroquinate synthase
5.50E-79
3.10E-22
2.50E-05
WP_014642908.1 1667673 1667016 - 218PF12710
PF06888
HAD
Put_Phosphatase
haloacid dehalogenase-like hydrolase
Putative Phosphatase
2.20E-11
5.10E-09
WP_014642909.1 1667905 1668703 + 265PF01476
PF10648
LysM
Gmad2
LysM domain
Immunoglobulin-like domain of bacterial spore germination
2.00E-39
1.50E-25
WP_014642910.1 1668932 1669838 + 301PF13349
PF10988
DUF4097
DUF2807
Putative adhesin
Putative auto-transporter adhesin, head GIN domain
1.60E-41
2.00E-07
WP_014642911.1 1671056 1670573 - 160PF00877NLPC_P60NlpC/P60 family7.90E-27
WP_041601290.1 1671796 1672015 + 72NO PFAM MATCH---
WP_014642914.1 1672090 1674004 + 637PF13241
PF00899
NAD_binding_7
ThiF
Putative NAD(P)-binding
ThiF family
1.20E-04
2.60E-04
WP_014642915.1 1674000 1675947 + 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-82
WP_014642916.1 1675968 1677531 + 520PF00881NitroreductaseNitroreductase family1.60E-15
WP_014642917.1 1678435 1677538 - 298PF01925TauESulfite exporter TauE/SafE4.50E-39
WP_014642919.1 1679583 1680315 + 243PF01507PAPS_reductPhosphoadenosine phosphosulfate reductase family1.70E-52
WP_014642920.1 1680328 1681483 + 384PF01747
PF14306
ATP-sulfurylase
PUA_2
ATP-sulfurylase
PUA-like domain
2.20E-93
2.70E-51
WP_014642921.1 1681500 1682100 + 199PF01583
PF13671
PF13238
PF07931
PF13191
APS_kinase
AAA_33
AAA_18
CPT
AAA_16
Adenylylsulphate kinase
AAA domain
AAA domain
Chloramphenicol phosphotransferase-like protein
AAA ATPase domain
7.50E-75
4.10E-07
5.90E-07
1.90E-04
6.70E-04
WP_014642922.1 1682096 1682873 + 258PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases3.30E-47
WP_014642923.1 1682887 1683646 + 252PF01903
PF06180
PF00762
CbiX
CbiK
Ferrochelatase
CbiX
Cobalt chelatase (CbiK)
Ferrochelatase
1.00E-45
1.60E-06
3.80E-04
WP_014642924.1 1683663 1684296 + 210PF13241
PF14824
PF00070
NAD_binding_7
Sirohm_synth_M
Pyr_redox
Putative NAD(P)-binding
Sirohaem biosynthesis protein central
Pyridine nucleotide-disulphide oxidoreductase
1.30E-23
2.90E-12
3.50E-04

Results for WP_009636643.1 [Serratia sp. M24T3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009636635.1 105142 104152 - 329PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase3.30E-117
WP_009636636.1 106887 105138 - 582PF00664
PF00005
PF02463
PF00270
PF03193
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
RsgA GTPase
1.20E-60
3.90E-35
1.00E-08
5.30E-06
9.70E-05
WP_009636637.1 109209 106923 - 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.00E-52
1.00E-14
3.00E-08
WP_009636638.1 109731 109446 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
6.00E-28
2.80E-07
WP_009636639.1 111479 109805 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.00E-98
7.30E-12
8.00E-07
WP_037378180.1 112358 111656 - 233PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-81
3.60E-07
6.10E-06
1.40E-05
WP_009636641.1 113928 112644 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-144
WP_009636642.1 115150 114064 - 361PF00266Aminotran_5Aminotransferase class-V1.20E-66
WP_009636643.1 115426 117190 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-83
1.40E-65
WP_009636644.1 117692 118556 + 287PF01226Form_Nir_transFormate/nitrite transporter4.20E-74
WP_009636645.1 118611 120894 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.20E-204
1.40E-42
WP_009636646.1 121010 121751 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-29
1.10E-17
5.80E-07
WP_009636647.1 123329 122183 - 381PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
8.40E-28
3.50E-06
1.00E-04
WP_009636648.1 125004 123711 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
3.00E-35
1.20E-31
WP_009636649.1 126452 125108 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
8.30E-65
3.80E-24
2.20E-16
2.60E-13
5.90E-07
WP_009636650.1 127071 126459 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.20E-57
1.90E-05
WP_009636651.1 130831 127312 - 1172PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.30E-74
1.00E-43
1.30E-27
1.00E-26
2.20E-05

Results for WP_003036343.1 [Streptococcus anginosus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003036434.1 467 1337 + 289PF00005
PF13304
PF13175
PF02463
PF13476
ABC_tran
AAA_21
AAA_15
SMC_N
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
AAA domain
6.20E-27
8.90E-19
1.70E-07
2.30E-07
2.00E-06
WP_003036392.1 1509 2007 + 165PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
1.40E-07
6.00E-06
WP_086558257.1 2643 3776 + 377INFERRED GENE---
WP_003028451.1 3883 4468 + 195INFERRED GENE---
WP_003078326.1 4501 5069 + 189INFERRED GENE---
WP_003036429.1 5496 5661 + 54NO PFAM MATCH---
WP_003036322.1 5876 6827 + 316PF00881NitroreductaseNitroreductase family8.30E-15
WP_003036332.1 6823 7891 + 355NO PFAM MATCH---
WP_003036343.1 7895 9254 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-42
WP_020999472.1 9228 9897 + 222PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.90E-10
WP_003036385.1 9893 10595 + 233PF19393DUF5968Family of unknown function (DUF5968)2.90E-19
WP_003031072.1 10615 11539 + 307PF00005
PF13304
PF03193
PF02463
ABC_tran
AAA_21
RsgA_GTPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
RecF/RecN/SMC N terminal domain
1.30E-33
7.30E-14
4.20E-05
7.50E-04
WP_003036478.1 11547 12675 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
4.00E-23
3.00E-18
8.50E-10
WP_003031101.1 12671 13790 + 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.40E-42
8.30E-21
7.30E-08
WP_003036319.1 14010 14898 + 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
9.70E-29
4.20E-04
WP_003025899.1 15006 15222 + 71NO PFAM MATCH---
WP_003031085.1 16477 15736 - 246PF00005
PF13304
PF02463
PF09818
PF13555
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
3.40E-34
9.80E-11
8.00E-10
3.80E-05
5.30E-04

Results for WP_009012965.1 [Prevotella histicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_219542235.1 0 710 + 235PF07592DDE_Tnp_ISAZ013Rhodopirellula transposase DDE domain2.40E-73
WP_009012969.1 3043 877 - 721PF13715
PF13620
PF07715
CarbopepD_reg_2
CarboxypepD_reg
Plug
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
TonB-dependent Receptor Plug Domain
7.80E-15
1.40E-05
1.10E-04
WP_008449717.1 3891 3108 - 260NO PFAM MATCH---
WP_008449642.1 4470 3936 - 177PF02163Peptidase_M50Peptidase family M505.30E-05
WP_008449671.1 5189 4466 - 240PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.80E-11
1.70E-04
WP_232214123.1 6203 5336 - 288PF00005
PF13304
PF02463
PF13476
ABC_tran
AAA_21
SMC_N
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
2.80E-26
4.60E-12
6.50E-05
2.10E-04
WP_009012966.1 7071 6186 - 294PF00881NitroreductaseNitroreductase family1.20E-15
WP_009012965.1 8371 7075 - 431PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-57
WP_008449695.1 9343 8383 - 319NO PFAM MATCH---
WP_009012962.1 9765 9945 + 59NO PFAM MATCH---
WP_008449654.1 10097 11375 + 425PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.60E-14
3.70E-06
1.00E-05
WP_009012961.1 11383 13657 + 757PF14905
PF13620
PF13715
PF00593
OMP_b-brl_3
CarboxypepD_reg
CarbopepD_reg_2
TonB_dep_Rec
Outer membrane protein beta-barrel family
Carboxypeptidase regulatory-like domain
CarboxypepD_reg-like domain
TonB dependent receptor
3.30E-17
1.00E-12
1.10E-12
2.80E-04
WP_008449702.1 13657 15847 + 729PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
1.40E-34
1.70E-30
9.40E-27
6.40E-07
3.50E-05
WP_008449756.1 15864 16344 + 159NO PFAM MATCH---
WP_009012960.1 16935 16518 - 138NO PFAM MATCH---
WP_219524209.1 18227 16931 - 431PF00589
PF13102
PF17293
Phage_integrase
Phage_int_SAM_5
Arm-DNA-bind_5
Phage integrase family
Phage integrase SAM-like domain
Arm DNA-binding domain
1.10E-21
2.60E-15
1.20E-07

Results for WP_014705320.1 [Methylophaga nitratireducenticrescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014705310.1 75753 74301 - 483PF02386TrkHCation transport protein2.00E-86
WP_014705311.1 77271 75759 - 503PF20154
PF00795
LNT_N
CN_hydrolase
Apolipoprotein N-acyltransferase N-terminal domain
Carbon-nitrogen hydrolase
6.50E-29
1.10E-27
WP_014705312.1 78140 77270 - 289PF03471
PF00571
CorC_HlyC
CBS
Transporter associated domain
CBS domain
1.40E-20
1.40E-15
WP_014705313.1 78601 78136 - 154PF02130YbeYEndoribonuclease YbeY3.40E-39
WP_202971556.1 79467 78597 - 289PF02562
PF13604
PF13245
PF01695
PhoH
AAA_30
AAA_19
IstB_IS21
PhoH-like protein
AAA domain
AAA domain
IstB-like ATP binding protein
9.60E-92
4.80E-10
1.70E-05
6.80E-04
WP_041354751.1 80934 79593 - 446PF00919
PF04055
PF01938
UPF0004
Radical_SAM
TRAM
Uncharacterized protein family UPF0004
Radical SAM superfamily
TRAM domain
3.10E-29
2.10E-28
8.40E-20
WP_014705318.1 81522 81957 + 144PF03928HbpS-likeHaem degrading protein HbpS-like5.10E-31
WP_014705319.1 82849 82090 - 252PF05735TSP_CThrombospondin C-terminal region4.00E-37
WP_014705320.1 83160 84903 + 580PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-78
8.70E-57
WP_014705321.1 86561 84986 - 524PF00999
PF02254
PF02826
Na_H_Exchanger
TrkA_N
2-Hacid_dh_C
Sodium/hydrogen exchanger family
TrkA-N domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
3.50E-38
5.70E-18
6.00E-05
WP_014705322.1 87013 86716 - 98PF08895DUF1840Domain of unknown function (DUF1840)3.50E-30
WP_014705324.1 87581 87260 - 106NO PFAM MATCH---
WP_202971542.1 87973 87697 - 91PF09313DUF1971Domain of unknown function (DUF1971)5.50E-24
WP_014705326.1 88717 88105 - 203PF03167UDGUracil DNA glycosylase superfamily8.60E-28
WP_014705327.1 89012 88757 - 84PF07369DUF1488Protein of unknown function (DUF1488)7.70E-10
WP_014705328.1 89198 90485 + 428PF13194
PF02308
DUF4010
MgtC
Domain of unknown function (DUF4010)
MgtC family
3.30E-65
3.30E-19
WP_104934230.1 92187 90723 - 487PF13091PLDc_2PLD-like domain1.40E-25

Results for WP_006350677.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006350667.1 7540088 7538834 - 417NO PFAM MATCH---
WP_040916946.1 7540241 7541222 + 326PF01497Peripla_BP_2Periplasmic binding protein8.80E-19
WP_130585255.1 7541218 7542265 + 348PF01032FecCDFecCD transport family1.40E-67
WP_006350671.1 7542261 7543272 + 336PF01032FecCDFecCD transport family2.20E-63
WP_015613002.1 7543268 7544196 + 309INFERRED GENE---
WP_006350673.1 7544252 7544393 + 46NO PFAM MATCH---
WP_130585254.1 7544780 7545833 + 350NO PFAM MATCH---
WP_130585253.1 7545829 7547374 + 514PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
1.70E-34
4.20E-22
WP_006350677.1 7547370 7548753 + 460PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-42
WP_130585252.1 7548854 7550138 + 427NO PFAM MATCH---
WP_130585251.1 7550134 7551886 + 583PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
1.50E-31
1.00E-07
2.60E-05
1.60E-04
WP_130585250.1 7551882 7553607 + 574PF00005
PF00664
ABC_tran
ABC_membrane
ABC transporter
ABC transporter transmembrane region
3.40E-24
1.30E-08
WP_006350681.1 7554141 7553661 - 159PF00582UspUniversal stress protein family2.30E-08
WP_006350682.1 7555415 7554149 - 421PF02040
PF03600
ArsB
CitMHS
Arsenical pump membrane protein
Citrate transporter
6.10E-22
3.40E-15
WP_006350683.1 7555599 7556166 + 188PF14124DUF4291Domain of unknown function (DUF4291)1.20E-60
WP_233168746.1 7559893 7556248 - 1214PF00082
PF13620
PF11721
PF13715
PF17210
Peptidase_S8
CarboxypepD_reg
Malectin
CarbopepD_reg_2
SdrD_B
Subtilase family
Carboxypeptidase regulatory-like domain
Malectin domain
CarboxypepD_reg-like domain
SdrD B-like domain
4.80E-43
1.00E-30
3.90E-25
2.00E-23
3.20E-07
WP_006350685.1 7561114 7560175 - 312PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.20E-17
1.20E-06

Results for WP_009109178.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_006347379.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006347371.1 3667586 3667130 - 151PF01037
PF13404
PF13412
PF12802
PF12840
AsnC_trans_reg
HTH_AsnC-type
HTH_24
MarR_2
HTH_20
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Helix-turn-helix domain
4.90E-19
4.00E-17
3.00E-14
7.90E-07
3.60E-05
WP_040914965.1 3668447 3667739 - 235PF02441FlavoproteinFlavoprotein7.40E-16
WP_040914966.1 3669096 3668535 - 186PF05685Uma2Putative restriction endonuclease1.30E-21
WP_006347374.1 3670069 3669139 - 309PF01040UbiAUbiA prenyltransferase family8.30E-49
WP_006347375.1 3671511 3670065 - 481PF01977UbiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase5.20E-160
WP_006347376.1 3671599 3671968 + 122PF13396PLDc_NPhospholipase_D-nuclease N-terminal1.40E-11
WP_233168880.1 3672978 3671973 - 334PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
3.50E-53
2.60E-48
8.10E-23
2.40E-10
1.90E-08
WP_045852909.1 3673823 3673013 - 269PF08241
PF13649
PF13489
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.80E-17
3.00E-15
1.70E-14
1.10E-12
2.70E-09
WP_006347379.1 3674964 3673815 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-51
WP_006347380.1 3676145 3674960 - 394PF07812TfuATfuA-like protein1.40E-41
WP_006347381.1 3676595 3676409 - 61PF04149DUF397Domain of unknown function (DUF397)3.10E-22
WP_078902188.1 3677485 3676591 - 297PF19054
PF13560
PF01381
DUF5753
HTH_31
HTH_3
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix
5.30E-44
5.10E-10
1.60E-05
WP_006347383.1 3678738 3677652 - 361PF01578Cytochrom_C_asmCytochrome C assembly protein3.60E-44
WP_006347384.1 3680570 3678734 - 611PF05140ResBResB-like family3.50E-129
WP_040914981.1 3681346 3680575 - 256PF02683
PF13386
DsbD
DsbD_2
Cytochrome C biogenesis protein transmembrane region
Cytochrome C biogenesis protein transmembrane region
1.20E-49
8.00E-08
WP_006347386.1 3681959 3681359 - 199PF00578
PF08534
PF13905
PF00085
AhpC-TSA
Redoxin
Thioredoxin_8
Thioredoxin
AhpC/TSA family
Redoxin
Thioredoxin-like
Thioredoxin
2.30E-21
5.70E-21
1.20E-09
9.90E-07
WP_040914983.1 3683336 3682046 - 429NO PFAM MATCH---

Results for WP_005707822.1 [Haemophilus paraphrohaemolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005707903.1 1889611 1889332 - 92PF05015HigB-like_toxinRelE-like toxin of type II toxin-antitoxin system HigB1.00E-29
WP_039850995.1 1889690 1890080 + 129NO PFAM MATCH---
WP_005707908.1 1890089 1890968 + 292NO PFAM MATCH---
WP_078177647.1 1891120 1891414 + 97NO PFAM MATCH---
WP_078177697.1 1891476 1891809 + 110NO PFAM MATCH---
WP_005709049.1 1891808 1891970 + 53NO PFAM MATCH---
WP_005709048.1 1891966 1892293 + 108NO PFAM MATCH---
WP_078177695.1 1892292 1892952 + 219NO PFAM MATCH---
WP_005707822.1 1893393 1895157 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-74
2.50E-65
WP_080351561.1 1895377 1895818 + 146PF07681
PF04173
DoxX
DoxD
DoxX
TQO small subunit DoxD
2.50E-20
7.20E-09
WP_005707799.1 1895852 1896140 + 95NO PFAM MATCH---
WP_005707827.1 1896216 1897137 + 306PF05114
PF01261
DUF692
AP_endonuc_2
Protein of unknown function (DUF692)
Xylose isomerase-like TIM barrel
1.60E-99
1.80E-04
WP_005707789.1 1897126 1897843 + 238PF09836DUF2063Putative DNA-binding domain4.30E-16
WP_005707797.1 1898037 1899000 + 320PF08003
PF13847
PF13489
PF08241
PF13649
Methyltransf_9
Methyltransf_31
Methyltransf_23
Methyltransf_11
Methyltransf_25
Protein of unknown function (DUF1698)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
6.30E-166
1.60E-09
2.30E-09
8.70E-09
1.50E-07
WP_005707813.1 1899554 1899047 - 168PF10063DUF2301Uncharacterized integral membrane protein (DUF2301)3.40E-07
WP_005707802.1 1900541 1899659 - 293PF03544
PF13103
PF06519
TonB_C
TonB_2
TolA
Gram-negative bacterial TonB protein C-terminal
TonB C terminal
TolA C-terminal
3.80E-18
8.80E-09
2.20E-04
WP_005705711.1 1900934 1900547 - 128PF02472ExbDBiopolymer transport protein ExbD/TolR3.30E-23

Results for WP_008332306.1 [Herbaspirillum sp. C7C8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017454451.1 0 204 + 68INFERRED GENE---
WP_008332306.1 2608 400 - 735PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-74
1.30E-72
1.20E-08
WP_008332418.1 3498 3009 - 162PF04386SspBStringent starvation protein B5.00E-39
WP_017453790.1 4230 3618 - 203PF13417
PF02798
PF13409
PF00043
PF13410
GST_N_3
GST_N
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
2.10E-17
1.00E-16
2.40E-15
2.00E-08
1.40E-06
WP_008332420.1 5092 4327 - 254PF02167
PF13442
Cytochrom_C1
Cytochrome_CBB3
Cytochrome C1 family
Cytochrome C oxidase, cbb3-type, subunit III
2.50E-24
8.30E-04
WP_241821177.1 6522 5115 - 468PF00033
PF13631
PF00032
Cytochrome_B
Cytochrom_B_N_2
Cytochrom_B_C
Cytochrome b/b6/petB
Cytochrome b(N-terminal)/b6/petB
Cytochrome b(C-terminal)/b6/petD
9.70E-65
5.70E-43
6.60E-37
WP_034351097.1 7133 6524 - 202PF00355RieskeRieske [2Fe-2S] domain3.60E-12
WP_175344824.1 7431 7863 + 143PF01741MscLLarge-conductance mechanosensitive channel, MscL1.90E-41
WP_034351099.1 8705 7940 - 254PF01784NIF3NIF3 (NGG1p interacting factor 3)4.50E-52
WP_034351100.1 8749 9931 + 393PF13365
PF00089
PF13180
PF17820
PF02163
Trypsin_2
Trypsin
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
Trypsin
PDZ domain
PDZ domain
Peptidase family M50
7.30E-33
5.50E-17
2.90E-16
6.30E-12
9.30E-11

Results for WP_005761647.1 [Pasteurella bettyae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005761674.1 1096019 1095170 - 282PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases1.10E-26
WP_005761655.1 1096095 1097820 + 574PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
1.90E-203
3.70E-05
WP_005761642.1 1097830 1098190 + 119PF02021UPF0102Uncharacterised protein family UPF01021.10E-21
WP_005761672.1 1098191 1098779 + 195PF13580SIS_2SIS domain1.30E-14
WP_005761645.1 1098840 1099422 + 193PF04972BONBON domain1.50E-32
WP_005761673.1 1100019 1099488 - 176PF00719PyrophosphataseInorganic pyrophosphatase1.70E-45
WP_005761643.1 1100834 1100123 - 236PF00753
PF16123
PF12706
Lactamase_B
HAGH_C
Lactamase_B_2
Metallo-beta-lactamase superfamily
Hydroxyacylglutathione hydrolase C-terminus
Beta-lactamase superfamily domain
1.80E-13
6.90E-13
4.10E-06
WP_005761668.1 1100873 1101587 + 237PF08241
PF13847
PF13649
Methyltransf_11
Methyltransf_31
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.20E-10
5.30E-05
7.60E-05
WP_005761647.1 1101652 1103413 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.30E-76
3.90E-64
WP_005761664.1 1103478 1104351 + 290PF05661DUF808Protein of unknown function (DUF808)7.10E-102
WP_005761660.1 1106520 1104447 - 690PF01432
PF19310
Peptidase_M3
TOP_N
Peptidase family M3
Neurolysin/Thimet oligopeptidase, N-terminal domain
5.00E-165
4.00E-29
WP_005761637.1 1106654 1107017 + 120PF04304DUF454Protein of unknown function (DUF454)3.10E-34
WP_005761639.1 1107023 1108772 + 582PF00005
PF00664
PF02463
PF03193
PF13555
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_29
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
RsgA GTPase
P-loop containing region of AAA domain
5.40E-31
3.20E-19
7.00E-07
2.50E-06
3.70E-04
WP_005761659.1 1108764 1110423 + 552PF00005
PF00664
PF13304
PF02463
PF13191
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-35
1.20E-22
4.70E-06
3.80E-05
9.60E-05
WP_005818847.1 1110587 1111352 + 255INFERRED GENE---
WP_005761670.1 1111414 1111690 + 91NO PFAM MATCH---
WP_005761657.1 1111811 1112237 + 141PF08765MorMor transcription activator family3.30E-09

Results for WP_005705778.1 [Haemophilus parahaemolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005705831.1 219953 220880 + 308PF01298
PF08794
PF16960
TbpB_B_D
Lipoprot_C
HpuA
C-lobe and N-lobe beta barrels of Tf-binding protein B
Lipoprotein GNA1870 C terminal like
Haemoglobin-haptoglobin utilisation, porphyrin transporter
5.90E-16
1.10E-06
1.70E-04
WP_005705754.1 221523 220917 - 201PF08239
PF04108
SH3_3
ATG17_like
Bacterial SH3 domain
Autophagy protein ATG17-like domain
4.80E-08
1.10E-04
WP_005705857.1 222982 221677 - 434PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.20E-152
WP_005705788.1 223990 223027 - 320PF08003
PF13489
PF13847
PF08241
PF13649
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_11
Methyltransf_25
Protein of unknown function (DUF1698)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.50E-166
1.80E-09
3.60E-09
1.10E-08
1.60E-07
WP_005705863.1 224902 224185 - 238PF09836DUF2063Putative DNA-binding domain8.50E-16
WP_005705672.1 225812 224891 - 306PF05114
PF01261
DUF692
AP_endonuc_2
Protein of unknown function (DUF692)
Xylose isomerase-like TIM barrel
1.40E-99
4.70E-04
WP_005705726.1 226177 225889 - 95NO PFAM MATCH---
WP_080349510.1 226652 226211 - 146PF07681
PF04173
DoxX
DoxD
DoxX
TQO small subunit DoxD
3.80E-20
7.20E-09
WP_005705778.1 228637 226873 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-74
1.20E-65
WP_005705834.1 228806 229352 + 181PF02627CMDCarboxymuconolactone decarboxylase family5.50E-12
WP_005705843.1 230438 229460 - 325PF00849
PF01479
PseudoU_synth_2
S4
RNA pseudouridylate synthase
S4 domain
9.10E-32
4.20E-07
WP_005705785.1 230596 231370 + 257PF13525
PF13512
PF12895
PF13174
PF13428
YfiO
TPR_18
ANAPC3
TPR_6
TPR_14
Outer membrane lipoprotein
Tetratricopeptide repeat
Anaphase-promoting complex, cyclosome, subunit 3
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-53
5.40E-31
4.10E-08
2.50E-06
1.10E-04
WP_005705619.1 231434 232463 + 342PF00814TsaDtRNA N6-adenosine threonylcarbamoyltransferase6.80E-103
WP_005705676.1 232509 232818 + 102PF01491Frataxin_CyayFrataxin-like domain5.30E-20
WP_005705706.1 232976 234782 + 601PF09382
PF00570
PF00271
PF00270
PF16124
RQC
HRDC
Helicase_C
DEAD
RecQ_Zn_bind
RQC domain
HRDC domain
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
RecQ zinc-binding
4.20E-36
1.90E-24
2.90E-22
7.40E-17
1.50E-15
WP_005705768.1 235711 234817 - 297PF00348polyprenyl_syntPolyprenyl synthetase5.70E-53
WP_005705698.1 235934 235712 - 73PF02609Exonuc_VII_SExonuclease VII small subunit1.60E-18

Results for WP_004436721.1 [Bacillus methanolicus PB1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003350560.1 356402 357985 + 527INFERRED GENE---
WP_034645299.1 360399 358761 - 545NO PFAM MATCH---
WP_004436708.1 362049 361128 - 306PF00294
PF08543
PF01256
PfkB
Phos_pyr_kin
Carb_kinase
pfkB family carbohydrate kinase
Phosphomethylpyrimidine kinase
Carbohydrate kinase
3.00E-69
2.10E-12
1.60E-05
WP_004436709.1 363075 362061 - 337PF14486DUF4432Domain of unknown function (DUF4432)5.00E-18
WP_004436711.1 364497 363204 - 430PF07690MFS_1Major Facilitator Superfamily4.40E-20
WP_155816431.1 365221 364549 - 223PF01791DeoCDeoC/LacD family aldolase2.20E-22
WP_004436715.1 366384 365361 - 340PF00532
PF13377
PF13407
PF00356
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein-like domain
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
3.70E-32
2.30E-30
3.10E-24
5.80E-20
WP_004436719.1 368355 366780 - 524PF00881NitroreductaseNitroreductase family2.80E-15
WP_004436721.1 370324 368377 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-86
WP_004436722.1 372285 370320 - 654PF00899ThiFThiF family2.80E-05
WP_081485622.1 372748 372460 - 95NO PFAM MATCH---
WP_004436725.1 374175 373260 - 304PF01156IU_nuc_hydroInosine-uridine preferring nucleoside hydrolase6.10E-91
WP_004436727.1 375153 374421 - 243PF01323
PF13462
PF13192
PF13743
DSBA
Thioredoxin_4
Thioredoxin_3
Thioredoxin_5
DSBA-like thioredoxin domain
Thioredoxin
Thioredoxin domain
Thioredoxin
3.70E-47
2.80E-10
3.60E-06
9.00E-05
WP_004436729.1 375358 375607 + 82NO PFAM MATCH---
WP_004436731.1 377163 375747 - 471PF13520
PF00324
PF03845
AA_permease_2
AA_permease
Spore_permease
Amino acid permease
Amino acid permease
Spore germination protein
4.20E-47
7.00E-27
1.60E-09
WP_004436733.1 377661 379014 + 450PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
2.40E-95
1.20E-46
WP_004436734.1 380668 379516 - 383PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.80E-70

Results for WP_004434480.1 [Bacillus methanolicus MGA3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017418566.1 1820453 1820552 + 33INFERRED GENE---
WP_004434463.1 1820802 1821075 + 90NO PFAM MATCH---
WP_034669211.1 1822103 1821071 - 343NO PFAM MATCH---
WP_004434467.1 1822822 1824649 + 608PF08298
PF06798
AAA_PrkA
PrkA
PrkA AAA domain
PrkA serine protein kinase C-terminal domain
4.90E-129
3.00E-18
WP_004434469.1 1824676 1825822 + 381PF04285DUF444Protein of unknown function (DUF444)9.50E-91
WP_004434471.1 1825818 1827057 + 412PF04293SpoVRSpoVR like protein3.90E-112
WP_016103992.1 1827783 1829008 + 408INFERRED GENE---
WP_004434478.1 1830905 1829327 - 525PF00881NitroreductaseNitroreductase family1.50E-17
WP_004434480.1 1832874 1830927 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-83
WP_004434482.1 1834835 1832870 - 654NO PFAM MATCH---
WP_237712854.1 1835332 1835032 - 99NO PFAM MATCH---
WP_004434486.1 1836663 1835748 - 304PF01156IU_nuc_hydroInosine-uridine preferring nucleoside hydrolase9.60E-90
WP_004434488.1 1837722 1836990 - 243PF01323
PF13462
PF13743
PF13192
DSBA
Thioredoxin_4
Thioredoxin_5
Thioredoxin_3
DSBA-like thioredoxin domain
Thioredoxin
Thioredoxin
Thioredoxin domain
5.10E-50
3.40E-11
2.10E-05
4.60E-05
WP_004434490.1 1838772 1838022 - 249PF13649
PF08241
PF13847
PF01209
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
3.40E-22
4.10E-22
5.70E-21
5.80E-15
2.00E-13
WP_004434492.1 1838976 1839234 + 85NO PFAM MATCH---
WP_038502176.1 1840831 1839406 - 474PF13520
PF00324
PF03845
AA_permease_2
AA_permease
Spore_permease
Amino acid permease
Amino acid permease
Spore germination protein
5.10E-46
2.10E-27
1.00E-08
WP_004434500.1 1841482 1842826 + 447PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
1.50E-96
1.70E-47

Results for WP_004060356.1 [Haloferax mediterranei ATCC 33500] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049917516.1 2451724 2452435 + 236NO PFAM MATCH---
WP_004060363.1 2452504 2452738 + 77NO PFAM MATCH---
WP_004060362.1 2453300 2452793 - 168PF00293NUDIXNUDIX domain6.20E-17
WP_004060361.1 2454209 2453315 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.90E-68
7.30E-37
WP_004060360.1 2454888 2454315 - 190PF01988VIT1VIT family9.60E-10
WP_004060359.1 2455187 2454887 - 99PF02680DUF211Uncharacterized ArCR, COG18881.20E-34
WP_004060358.1 2456647 2455399 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.90E-154
2.80E-09
4.00E-05
WP_004060357.1 2457009 2457837 + 275PF19138DUF5821Family of unknown function (DUF5821)2.40E-94
WP_004060356.1 2457892 2459581 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-56
WP_004060355.1 2460894 2459754 - 379PF01889DUF63Membrane protein of unknown function DUF632.60E-38
WP_004060354.1 2461480 2461009 - 156PF13412
PF13404
PF01037
PF12840
PF12802
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR_2
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.30E-16
9.20E-16
5.10E-08
1.50E-06
WP_004060353.1 2462419 2461615 - 267PF00459Inositol_PInositol monophosphatase family2.10E-48
WP_004060352.1 2462513 2462783 + 89NO PFAM MATCH---
WP_004060351.1 2464388 2463731 - 218PF03824NicOHigh-affinity nickel-transport protein3.70E-06
WP_004060350.1 2464680 2464488 - 63NO PFAM MATCH---
WP_004060349.1 2464823 2465309 + 161PF03745DUF309Domain of unknown function (DUF309)1.40E-14
WP_004060348.1 2465393 2466245 + 283PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.40E-10

Results for WP_012052024.1 [Pseudomonas sp. DCB_CB] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003256034.1 64389 62643 - 581PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-176
WP_003256033.1 64704 65022 + 105NO PFAM MATCH---
WP_003256032.1 65030 65231 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_003256031.1 65280 65922 + 213PF01810LysELysE type translocator1.30E-31
WP_003256028.1 66129 66918 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
3.90E-29
7.80E-05
WP_060538061.1 68331 66987 - 447PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
8.00E-25
4.30E-21
4.30E-04
WP_004577479.1 70605 68349 - 751PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
4.90E-34
1.80E-30
2.60E-04
WP_003256023.1 71060 70604 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.20E-22
3.80E-08
1.20E-05
WP_012052024.1 71329 73516 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-73
2.00E-72
7.60E-08
WP_256818977.1 74601 73725 - 291PF20455DUF6708Family of unknown function (DUF6708)2.00E-06
WP_012052026.1 74603 75916 + 437INFERRED GENE---

Results for WP_014765083.1 [Sinorhizobium fredii USDA 257] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014765075.1 4580856 4580103 - 250PF03740PdxJPyridoxal phosphate biosynthesis protein PdxJ2.70E-76
WP_014765076.1 4581045 4581756 + 236PF05988
PF00578
DUF899
AhpC-TSA
Bacterial protein of unknown function (DUF899)
AhpC/TSA family
4.40E-63
7.90E-04
WP_014765077.1 4581970 4583074 + 367NO PFAM MATCH---
WP_014765078.1 4583549 4583792 + 80PF05433Rick_17kDa_AntiGlycine zipper 2TM domain2.80E-05
WP_041415500.1 4583807 4584161 + 117PF13405
PF00036
PF13202
PF13499
PF13833
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_7
EF-hand_8
EF-hand domain
EF hand
EF hand
EF-hand domain pair
EF-hand domain pair
7.20E-14
9.90E-14
3.30E-12
1.10E-09
7.70E-07
WP_014765080.1 4585031 4584344 - 228NO PFAM MATCH---
WP_014765081.1 4586238 4585053 - 394NO PFAM MATCH---
WP_014765082.1 4587080 4586273 - 268PF07812TfuATfuA-like protein2.90E-40
WP_014765083.1 4588164 4587084 - 359PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-44
WP_014765084.1 4591378 4588303 - 1024PF13191
PF00211
PF13401
AAA_16
Guanylate_cyc
AAA_22
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
1.10E-14
1.10E-08
2.80E-04
WP_014765085.1 4592292 4591659 - 210PF01810LysELysE type translocator9.80E-29
WP_014765086.1 4593456 4592328 - 375PF13604
PF13538
PF13245
PF01443
PF05970
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
PIF1
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Viral (Superfamily 1) RNA helicase
PIF1-like helicase
8.10E-26
1.50E-18
1.70E-15
4.40E-10
2.30E-08
WP_014765088.1 4593751 4594840 + 362PF05145AbrBTransition state regulatory protein AbrB4.30E-90
WP_014765089.1 4595029 4595404 + 124PF03640Lipoprotein_15Secreted repeat of unknown function1.40E-34
WP_014765090.1 4595387 4595942 + 184PF08281
PF04542
PF04545
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
2.60E-14
3.40E-10
7.50E-10
WP_014765091.1 4595938 4596751 + 270NO PFAM MATCH---
WP_161623539.1 4597161 4596765 - 131PF02211NHase_betaNitrile hydratase beta subunit2.10E-07

Results for WP_014768703.1 [Sulfurospirillum barnesii SES-3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014768697.1 466145 465398 - 248PF08378
PF01396
NERD
zf-C4_Topoisom
Nuclease-related domain
Topoisomerase DNA binding C4 zinc finger
5.60E-28
1.70E-10
WP_014768698.1 467574 466299 - 424PF00037
PF12837
PF12838
PF13187
PF12797
Fer4
Fer4_6
Fer4_7
Fer4_9
Fer4_2
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.30E-11
2.60E-11
1.90E-10
1.10E-07
1.30E-07
WP_014768699.1 467886 467673 - 70PF13275
PF01479
S4_2
S4
S4 domain
S4 domain
1.20E-24
3.50E-05
WP_216593426.1 468003 469110 + 368NO PFAM MATCH---
WP_216593427.1 469102 469294 + 63NO PFAM MATCH---
WP_014768700.1 470158 469486 - 223PF02621VitK2_biosynthMenaquinone biosynthesis2.20E-20
WP_014768701.1 470296 471535 + 412PF00270
PF00271
PF04851
DEAD
Helicase_C
ResIII
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
1.10E-49
2.40E-27
1.10E-08
WP_014768702.1 473037 471696 - 446PF02447
PF03600
GntP_permease
CitMHS
GntP family permease
Citrate transporter
7.10E-96
8.40E-12
WP_014768703.1 474761 473132 - 542PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.10E-65
WP_014768704.1 475746 474831 - 304PF01145Band_7SPFH domain / Band 7 family2.00E-35
WP_014768705.1 476202 475764 - 145PF01957NfeDNfeD-like C-terminal, partner-binding6.80E-10
WP_014768706.1 476703 477204 + 166NO PFAM MATCH---
WP_014768707.1 478501 477277 - 407PF02518
PF08269
PF17200
PF17201
PF13589
HATPase_c
dCache_2
sCache_2
Cache_3-Cache_2
HATPase_c_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Cache domain
Single Cache domain 2
Cache 3/Cache 2 fusion domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
5.30E-18
9.60E-18
1.40E-16
2.00E-06
2.60E-04
WP_014768708.1 478877 478484 - 130PF08269dCache_2Cache domain2.20E-07
WP_014768709.1 479094 479769 + 224PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.70E-25
1.70E-11
WP_014768710.1 479934 480924 + 329PF03480DctPBacterial extracellular solute-binding protein, family 71.30E-99
WP_014768711.1 481014 481578 + 187PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component1.70E-30

Results for WP_002757641.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_014797159.1 [Bernardetia litoralis DSM 6794] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014797151.1 1462870 1462648 - 73PF11387DUF2795Protein of unknown function (DUF2795)8.20E-16
WP_014797152.1 1463487 1464159 + 223PF01578Cytochrom_C_asmCytochrome C assembly protein4.60E-19
WP_014797153.1 1464238 1464565 + 108PF20077CcmD_altCcmD family protein3.60E-14
WP_014797154.1 1464633 1465053 + 139PF03100CcmECcmE2.90E-09
WP_245532648.1 1465263 1465626 + 120NO PFAM MATCH---
WP_245532649.1 1465667 1466036 + 122PF01609DDE_Tnp_1Transposase DDE domain5.10E-07
WP_014797155.1 1467712 1466206 - 501PF13365
PF13180
PF00089
PF00595
PF17820
Trypsin_2
PDZ_2
Trypsin
PDZ
PDZ_6
Trypsin-like peptidase domain
PDZ domain
Trypsin
PDZ domain
PDZ domain
2.60E-33
3.10E-27
2.60E-16
5.90E-13
1.60E-11
WP_014797158.1 1468954 1469923 + 322NO PFAM MATCH---
WP_014797159.1 1469931 1471221 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-64
WP_014797160.1 1471273 1472149 + 291PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
1.00E-13
1.40E-06
WP_014797161.1 1472145 1473006 + 286PF00005
PF13304
PF13555
PF02463
ABC_tran
AAA_21
AAA_29
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
1.40E-26
9.80E-14
1.70E-05
1.10E-04
WP_014797162.1 1473018 1473735 + 238PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
6.70E-09
7.20E-05
WP_014797163.1 1473749 1474223 + 157PF11667
PF02163
DUF3267
Peptidase_M50
Putative zincin peptidase
Peptidase family M50
6.70E-05
8.00E-04
WP_014797164.1 1474234 1475041 + 268PF15941FidL_likeFidL-like putative membrane protein8.90E-04
WP_014797165.1 1475134 1477309 + 724PF13715
PF07715
PF13620
CarbopepD_reg_2
Plug
CarboxypepD_reg
CarboxypepD_reg-like domain
TonB-dependent Receptor Plug Domain
Carboxypeptidase regulatory-like domain
7.20E-15
9.20E-07
2.90E-06
WP_157698916.1 1477609 1477456 - 50NO PFAM MATCH---
WP_014797166.1 1478006 1482149 + 1380PF07494
PF07228
PF07495
PF13185
PF13492
Reg_prop
SpoIIE
Y_Y_Y
GAF_2
GAF_3
Two component regulator propeller
Stage II sporulation protein E (SpoIIE)
Y_Y_Y domain
GAF domain
GAF domain
2.70E-64
7.90E-18
3.10E-15
2.10E-12
1.00E-07

Results for WP_002757645.1 [Microcystis aeruginosa PCC 9717] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002757633.1 33586 33211 - 124PF18765
PF01909
Polbeta
NTP_transf_2
Polymerase beta, Nucleotidyltransferase
Nucleotidyltransferase domain
2.80E-09
9.80E-06
WP_002757634.1 33955 34177 + 73PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system1.50E-07
WP_002738737.1 34193 34412 + 72PF10047
PF02604
DUF2281
PhdYeFM_antitox
Protein of unknown function (DUF2281)
Antitoxin Phd_YefM, type II toxin-antitoxin system
5.50E-10
1.30E-07
WP_002757635.1 34408 34792 + 127PF01850PINPIN domain2.30E-12
WP_002757638.1 35113 35458 + 114PF05973Gp49Phage derived protein Gp49-like (DUF891)2.10E-20
WP_002757640.1 35460 35760 + 99PF13744
PF13560
HTH_37
HTH_31
Helix-turn-helix domain
Helix-turn-helix domain
7.00E-27
9.50E-04
WP_256378287.1 36004 35794 - 69PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-07
WP_223212957.1 36243 36690 + 148PF12151MVLMannan-binding protein3.70E-30
WP_002757645.1 39105 36807 - 765PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-99
WP_002757647.1 39701 40049 + 115PF00301RubredoxinRubredoxin7.70E-23
WP_002757649.1 40155 41148 + 330PF14870
PF15902
PF02012
PSII_BNR
Sortilin-Vps10
BNR
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
BNR/Asp-box repeat
4.50E-143
2.70E-09
1.60E-06
WP_002749269.1 41226 41472 + 81PF00284
PF00283
Cytochrom_B559a
Cytochrom_B559
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
4.30E-26
1.00E-15
WP_002736175.1 41497 41632 + 44PF00283Cytochrom_B559Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits2.00E-17
WP_002735805.1 41642 41762 + 39PF02419PsbLPsbL protein1.60E-23
WP_002736108.1 41804 41924 + 39PF01788PsbJPsbJ2.50E-23
WP_002757651.1 43823 42296 - 508PF00421PSIIPhotosystem II protein1.10E-264
MICAB_RS28055 44484 45141 + 219INFERRED GENE---

Results for WP_002770323.1 [Microcystis aeruginosa PCC 9443] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012264100.1 35805 36052 + 82INFERRED GENE---
WP_002770311.1 36823 36154 - 222PF01895
PF01865
PhoU
PhoU_div
PhoU domain
Protein of unknown function DUF47
4.00E-34
1.20E-08
WP_002770312.1 38518 37216 - 433PF02518
PF00512
PF13188
HATPase_c
HisKA
PAS_8
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS domain
3.00E-22
5.10E-14
5.90E-04
WP_002770313.1 39318 38565 - 250PF00486
PF00072
Trans_reg_C
Response_reg
Transcriptional regulatory protein, C terminal
Response regulator receiver domain
1.20E-28
7.30E-27
WP_002770315.1 39392 40148 + 251PF02633CreatininaseCreatinine amidohydrolase7.10E-65
WP_002770316.1 40367 41132 + 254NO PFAM MATCH---
WP_002770318.1 42628 41161 - 488PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
4.90E-66
2.90E-37
WP_002770320.1 43327 42775 - 183PF13563
PF02834
2_5_RNA_ligase2
LigT_PEase
2'-5' RNA ligase superfamily
LigT like Phosphoesterase
1.30E-19
2.70E-10
WP_002770323.1 45857 43559 - 765PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-99
WP_002770325.1 46411 46759 + 115PF00301RubredoxinRubredoxin4.90E-22
WP_002770327.1 46866 47859 + 330PF14870
PF15902
PF02012
PSII_BNR
Sortilin-Vps10
BNR
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
BNR/Asp-box repeat
2.30E-142
1.90E-09
1.50E-06
WP_002749269.1 47937 48183 + 81PF00284
PF00283
Cytochrom_B559a
Cytochrom_B559
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
4.30E-26
1.00E-15
WP_002736175.1 48208 48343 + 44PF00283Cytochrom_B559Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits2.00E-17
WP_002735805.1 48353 48473 + 39PF02419PsbLPsbL protein1.60E-23
WP_043995402.1 48515 48635 + 39PF01788PsbJPsbJ1.50E-23
WP_002749271.1 50469 48942 - 508PF00421PSIIPhotosystem II protein1.20E-264
WP_002749272.1 51164 50852 - 103NO PFAM MATCH---

Results for WP_002781474.1 [Microcystis aeruginosa PCC 9806] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002781462.1 197109 198759 + 549PF03109
PF01636
ABC1
APH
ABC1 atypical kinase-like domain
Phosphotransferase enzyme family
4.50E-71
2.50E-04
WP_002781465.1 199179 198771 - 135NO PFAM MATCH---
WP_002781466.1 200845 199423 - 473PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
2.30E-138
1.50E-28
WP_223210013.1 202370 201128 - 413PF04851
PF18766
ResIII
SWI2_SNF2
Type III restriction enzyme, res subunit
SWI2/SNF2 ATPase
9.40E-21
1.00E-04
WP_002781469.1 206795 202847 - 1315PF18065
PF00082
PF18047
PF00881
PF18679
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
HTH_57
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
ThcOx helix turn helix domain
8.20E-31
3.50E-20
9.40E-17
2.50E-12
2.90E-12
WP_002781470.1 207687 206883 - 267PF19147DUF5829Family of unknown function (DUF5829)9.20E-48
WP_002781471.1 208705 207739 - 321PF19156DUF5838Family of unknown function (DUF5838)3.50E-80
WP_002734081.1 209251 208999 - 83PF19155DUF5837Family of unknown function (DUF5837)1.10E-22
WP_002781474.1 211713 209382 - 776PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-96
WP_002781476.1 212020 211777 - 80NO PFAM MATCH---
WP_002781478.1 212322 212070 - 83NO PFAM MATCH---
WP_002781480.1 214398 212424 - 657PF18065
PF00082
PF18047
PatG_C
Peptidase_S8
PatG_D
PatG C-terminal
Subtilase family
PatG Domain
3.00E-37
5.00E-33
1.90E-19
WP_196219094.1 215136 214911 - 74NO PFAM MATCH---
WP_043999779.1 215728 215427 - 100NO PFAM MATCH---
WP_002781482.1 216690 215724 - 321PF08279
PF13545
PF13730
PF01978
PF13384
HTH_11
HTH_Crp_2
HTH_36
TrmB
HTH_23
HTH domain
Crp-like helix-turn-helix domain
Helix-turn-helix domain
Sugar-specific transcriptional regulator TrmB
Homeodomain-like domain
7.00E-06
2.10E-04
2.60E-04
3.70E-04
4.20E-04
WP_002781484.1 216979 217801 + 273PF01343
PF00574
PF01972
Peptidase_S49
CLP_protease
SDH_sah
Peptidase family S49
Clp protease
Serine dehydrogenase proteinase
6.50E-55
3.00E-06
7.50E-04
WP_002781486.1 217869 218271 + 133PF07736CM_1Chorismate mutase type I2.40E-50

Results for WP_002785362.1 [Microcystis aeruginosa PCC 9807] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002785358.1 145423 146098 + 224PF07077DUF1345Protein of unknown function (DUF1345)2.00E-51
WP_002785360.1 146859 148386 + 508PF00421PSIIPhotosystem II protein1.00E-264
WP_043995402.1 148746 148626 - 39PF01788PsbJPsbJ1.50E-23
WP_002735805.1 148908 148788 - 39PF02419PsbLPsbL protein1.60E-23
WP_002736175.1 149053 148918 - 44PF00283Cytochrom_B559Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits2.00E-17
WP_002749269.1 149324 149078 - 81PF00284
PF00283
Cytochrom_B559a
Cytochrom_B559
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
4.30E-26
1.00E-15
WP_002770327.1 150395 149402 - 330PF14870
PF15902
PF02012
PSII_BNR
Sortilin-Vps10
BNR
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
BNR/Asp-box repeat
2.30E-142
1.90E-09
1.50E-06
WP_002757647.1 150850 150502 - 115PF00301RubredoxinRubredoxin7.70E-23
WP_002785362.1 151404 153702 + 765PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-100
WP_002785364.1 154212 153828 - 127PF01850PINPIN domain3.80E-12
WP_002785366.1 154427 154208 - 72PF10047
PF02604
DUF2281
PhdYeFM_antitox
Protein of unknown function (DUF2281)
Antitoxin Phd_YefM, type II toxin-antitoxin system
5.40E-10
2.60E-08
WP_002785367.1 154665 154443 - 73PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system5.30E-07
WP_002785368.1 156568 155074 - 497NO PFAM MATCH---
WP_002785369.1 158164 156778 - 461NO PFAM MATCH---
WP_002785370.1 158378 158132 - 81NO PFAM MATCH---
WP_043995423.1 158780 158981 + 66PF14076DUF4258Domain of unknown function (DUF4258)1.90E-06
WP_002785372.1 158977 159193 + 71NO PFAM MATCH---

Results for WP_002796590.1 [Microcystis aeruginosa PCC 9809] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044034743.1 773554 774907 + 450PF00132
PF12804
PF00483
PF01128
PF14602
Hexapep
NTP_transf_3
NTP_transferase
IspD
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
MobA-like NTP transferase domain
Nucleotidyl transferase
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Hexapeptide repeat of succinyl-transferase
3.90E-26
1.90E-19
5.00E-14
4.90E-07
1.40E-05
WP_002796585.1 776760 775209 - 516PF11850DUF3370Protein of unknown function (DUF3370)1.70E-194
WP_029190179.1 776867 777011 + 48INFERRED GENE---
WP_002796586.1 781083 777138 - 1314PF18065
PF00082
PF18047
PF00881
PF18679
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
HTH_57
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
ThcOx helix turn helix domain
8.10E-31
9.80E-21
8.80E-17
1.40E-10
3.00E-09
WP_002749228.1 781123 781783 + 219PF14907
PF08843
NTP_transf_5
AbiEii
Uncharacterised nucleotidyltransferase
Nucleotidyl transferase AbiEii toxin, Type IV TA system
1.20E-05
1.30E-04
WP_002796587.1 782826 782022 - 267PF19147DUF5829Family of unknown function (DUF5829)9.80E-48
WP_223210641.1 783829 782878 - 316PF19156DUF5838Family of unknown function (DUF5838)4.30E-82
WP_002796589.1 784390 784138 - 83PF19155DUF5837Family of unknown function (DUF5837)5.00E-22
WP_002796590.1 786852 784521 - 776PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-97
WP_002796591.1 787153 786910 - 80NO PFAM MATCH---
WP_002796592.1 787455 787203 - 83NO PFAM MATCH---
WP_002796593.1 789534 787560 - 657PF18065
PF00082
PF18047
PatG_C
Peptidase_S8
PatG_D
PatG C-terminal
Subtilase family
PatG Domain
2.10E-37
9.30E-35
1.60E-19
WP_076611791.1 790140 790309 + 56INFERRED GENE---
WP_029190179.1 790692 790803 + 37INFERRED GENE---
WP_002796595.1 791019 791601 + 193PF00578
PF08534
PF13098
AhpC-TSA
Redoxin
Thioredoxin_2
AhpC/TSA family
Redoxin
Thioredoxin-like domain
4.90E-16
5.40E-13
6.60E-04
WP_002796596.1 793043 791792 - 416PF00370
PF02782
FGGY_N
FGGY_C
FGGY family of carbohydrate kinases, N-terminal domain
FGGY family of carbohydrate kinases, C-terminal domain
6.10E-13
3.80E-10
WP_002796597.1 793045 794107 + 353PF14249Tocopherol_cyclTocopherol cyclase3.60E-141

Results for WP_004163935.1 [Microcystis aeruginosa PCC 9701] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002749272.1 156513 156825 + 103NO PFAM MATCH---
WP_002735904.1 157175 158702 + 508PF00421PSIIPhotosystem II protein1.00E-264
WP_002736108.1 159259 159139 - 39PF01788PsbJPsbJ2.50E-23
WP_002735805.1 159421 159301 - 39PF02419PsbLPsbL protein1.60E-23
WP_002736175.1 159566 159431 - 44PF00283Cytochrom_B559Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits2.00E-17
WP_002749269.1 159837 159591 - 81PF00284
PF00283
Cytochrom_B559a
Cytochrom_B559
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
4.30E-26
1.00E-15
WP_004163934.1 160908 159915 - 330PF14870
PF15902
PF02012
PSII_BNR
Sortilin-Vps10
BNR
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
BNR/Asp-box repeat
9.20E-144
2.90E-09
3.10E-07
WP_002736293.1 161362 161014 - 115PF00301RubredoxinRubredoxin2.00E-22
WP_004163935.1 161916 164214 + 765PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-100
WP_004163937.1 164713 164302 - 136PF17882SBDOAA-family lectin sugar binding domain1.10E-38
WP_223211167.1 165058 165268 + 69PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-07
WP_004163939.1 165602 165302 - 99PF13744HTH_37Helix-turn-helix domain3.90E-27
WP_004163940.1 165949 165604 - 114PF05973Gp49Phage derived protein Gp49-like (DUF891)1.20E-21
WP_004267868.1 166654 166270 - 127PF01850PINPIN domain2.80E-12
WP_002738737.1 166869 166650 - 72PF10047
PF02604
DUF2281
PhdYeFM_antitox
Protein of unknown function (DUF2281)
Antitoxin Phd_YefM, type II toxin-antitoxin system
5.50E-10
1.30E-07
WP_004267869.1 167035 166885 - 49NO PFAM MATCH---
WP_223211146.1 167446 167851 + 134PF18765
PF01909
Polbeta
NTP_transf_2
Polymerase beta, Nucleotidyltransferase
Nucleotidyltransferase domain
7.50E-10
1.20E-05

Results for WP_004163938.1 [Microcystis flos-aquae FACHB-1344] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043995402.1 22337 22217 - 39PF01788PsbJPsbJ1.50E-23
WP_002735805.1 22499 22379 - 39PF02419PsbLPsbL protein1.60E-23
WP_002736175.1 22644 22509 - 44PF00283Cytochrom_B559Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits2.00E-17
WP_002749269.1 22915 22669 - 81PF00284
PF00283
Cytochrom_B559a
Cytochrom_B559
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
4.30E-26
1.00E-15
WP_061431901.1 23986 22993 - 330PF14870
PF15902
PF02012
PSII_BNR
Sortilin-Vps10
BNR
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
BNR/Asp-box repeat
5.50E-143
2.40E-09
1.60E-06
WP_002736293.1 24440 24092 - 115PF00301RubredoxinRubredoxin2.00E-22
WP_002770323.1 25036 27334 + 766INFERRED GENE---
WP_242034682.1 27898 27451 - 148PF12151MVLMannan-binding protein4.40E-30
WP_004163938.1 28152 28347 + 64PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-06
WP_012266232.1 28681 28381 - 99PF13744HTH_37Helix-turn-helix domain9.00E-28
WP_242034683.1 29029 28744 - 94PF05973Gp49Phage derived protein Gp49-like (DUF891)2.20E-15
WP_002738857.1 29758 29263 - 164PF13508
PF13673
PF00583
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.90E-08
3.00E-07
6.20E-05
WP_002778803.1 30045 29754 - 96PF08681DUF1778Protein of unknown function (DUF1778)1.00E-26
WP_002799473.1 30582 30309 - 90NO PFAM MATCH---
WP_072924714.1 30847 30559 - 95PF04365BrnT_toxinRibonuclease toxin, BrnT, of type II toxin-antitoxin system6.50E-29
WP_004267886.1 31734 31068 - 221NO PFAM MATCH---
WP_149986003.1 32496 31770 - 241PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family3.10E-10

Results for WP_003191637.1 [Pseudomonas lactis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003191625.1 3322108 3324439 + 776PF13304
PF13175
PF02463
PF00005
PF13401
AAA_21
AAA_15
SMC_N
ABC_tran
AAA_22
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
ABC transporter
AAA domain
6.00E-16
3.60E-09
1.20E-07
6.90E-07
3.50E-04
WP_144020162.1 3324431 3325235 + 267PF01844HNHHNH endonuclease2.20E-05
WP_003191627.1 3326293 3325399 - 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.50E-40
3.20E-16
WP_003191628.1 3326387 3327572 + 394PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.80E-32
3.50E-11
3.30E-08
WP_003191630.1 3327636 3328356 + 239PF00106
PF13561
adh_short
adh_short_C2
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
1.10E-22
1.00E-09
WP_003191632.1 3328421 3328904 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.00E-46
WP_003191634.1 3329168 3330545 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.60E-64
1.00E-14
WP_003191636.1 3330541 3331708 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme1.60E-149
WP_003191637.1 3334029 3331830 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.10E-75
5.50E-71
3.70E-08
WP_003191639.1 3334174 3334735 + 186PF00857IsochorismataseIsochorismatase family2.40E-36
WP_003191640.1 3335247 3334797 - 149PF00293NUDIXNUDIX domain9.70E-16
WP_003191641.1 3336037 3335239 - 265PF01909NTP_transf_2Nucleotidyltransferase domain8.00E-04
WP_003191642.1 3336513 3336033 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
1.50E-26
1.80E-05
3.50E-05
WP_003191643.1 3336701 3337127 + 141PF09990DUF2231Predicted membrane protein (DUF2231)1.20E-09
WP_003191644.1 3337123 3338416 + 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.30E-11
1.80E-05
WP_003191645.1 3340135 3338680 - 484PF02321OEPOuter membrane efflux protein1.60E-33
WP_003191646.1 3343308 3340131 - 1058PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
1.50E-15
3.60E-05

Results for WP_005787966.1 [Pseudomonas synxantha BG33R] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005787951.1 2937232 2936248 - 327PF00892EamAEamA-like transporter family1.60E-09
WP_005787953.1 2937324 2938233 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-25
5.40E-19
WP_005787955.1 2939556 2938263 - 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
5.90E-12
1.30E-05
WP_005787957.1 2939978 2939552 - 141PF09990DUF2231Predicted membrane protein (DUF2231)6.40E-09
WP_005787958.1 2940166 2940646 + 159PF13671
PF13238
PF01712
PF08433
AAA_33
AAA_18
dNK
KTI12
AAA domain
AAA domain
Deoxynucleoside kinase
Chromatin associated protein KTI12
1.40E-28
8.10E-07
7.70E-05
6.10E-04
WP_005787960.1 2940642 2941440 + 265NO PFAM MATCH---
WP_016704533.1 2941432 2941564 + 44INFERRED GENE---
WP_005787964.1 2942201 2941640 - 186PF00857IsochorismataseIsochorismatase family6.50E-36
WP_005787966.1 2942356 2944555 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
2.10E-71
3.60E-08
WP_005787968.1 2945848 2944681 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme2.60E-149
WP_005787970.1 2947221 2945844 - 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.40E-65
2.20E-15
WP_157264155.1 2947323 2947473 + 49NO PFAM MATCH---
WP_032803512.1 2952499 2947555 - 1647PF05593RHS_repeatRHS Repeat4.50E-11
WP_005787974.1 2953195 2952712 - 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.10E-46
WP_005787976.1 2953980 2953260 - 239PF00106
PF13561
PF13460
adh_short
adh_short_C2
NAD_binding_10
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
NAD(P)H-binding
4.40E-23
1.60E-10
9.80E-04
WP_005787978.1 2955230 2954045 - 394PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
5.70E-32
2.70E-10
3.70E-08
WP_005787980.1 2955324 2956218 + 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.50E-40
7.50E-17

Results for WP_008373510.1 [Pseudomonas sp. M47T1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008373493.1 84551 85484 + 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.00E-39
2.20E-18
WP_008373496.1 85568 87287 + 572PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.10E-42
5.40E-39
7.60E-28
WP_008373497.1 87585 88866 + 426PF07690MFS_1Major Facilitator Superfamily8.70E-15
WP_008373498.1 90056 88862 - 397PF13377
PF12833
PF00165
PF13407
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Periplasmic binding protein-like domain
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Periplasmic binding protein domain
1.50E-32
7.50E-17
7.40E-15
3.40E-07
WP_008373501.1 90221 91538 + 438NO PFAM MATCH---
WP_008373504.1 91665 92667 + 333PF13407
PF00532
Peripla_BP_4
Peripla_BP_1
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
2.50E-62
6.70E-08
WP_008373507.1 92843 94403 + 519PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
8.70E-52
3.90E-07
WP_008373508.1 94399 95536 + 378PF02653BPD_transp_2Branched-chain amino acid transport system / permease component1.10E-30
WP_008373510.1 97798 95596 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.90E-73
7.00E-72
5.20E-07
WP_085989378.1 98692 97918 - 257PF04816
PF12847
TrmK
Methyltransf_18
tRNA (adenine(22)-N(1))-methyltransferase
Methyltransferase domain
4.80E-55
1.10E-45
WP_177323401.1 98918 98693 - 74NO PFAM MATCH---
WP_008373517.1 99102 100248 + 381PF01070
PF00478
PF01645
PF03060
PF05690
FMN_dh
IMPDH
Glu_synthase
NMO
ThiG
FMN-dependent dehydrogenase
IMP dehydrogenase / GMP reductase domain
Conserved region in glutamate synthase
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
7.90E-127
2.60E-06
5.60E-05
2.40E-04
3.10E-04
PMM47T1_RS29265 100415 100570 + 51INFERRED GENE---

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_004809371.1 [Acinetobacter schindleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004809385.1 1614795 1615809 + 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.90E-17
5.00E-04
WP_004809384.1 1615899 1616103 + 67NO PFAM MATCH---
WP_004809382.1 1616720 1616111 - 202PF01914MarCMarC family integral membrane protein1.20E-14
YP_004994476.1 1616748 1618799 + 683INFERRED GENE---
WP_004809378.1 1619054 1619660 + 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
1.00E-29
2.50E-11
WP_004809376.1 1619656 1621132 + 491PF00171AldedhAldehyde dehydrogenase family5.40E-175
WP_108675984.1 1621143 1622799 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.30E-96
2.20E-40
5.40E-04
WP_004809373.1 1622926 1623697 + 256NO PFAM MATCH---
WP_004809371.1 1624039 1626241 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.70E-75
6.90E-73
8.30E-09
WP_004809370.1 1626483 1627482 + 332PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain6.70E-04
WP_004809367.1 1627469 1628264 + 264PF02585PIG-LGlcNAc-PI de-N-acetylase1.10E-24
WP_004809365.1 1628244 1628853 + 202PF05401
PF13649
PF08241
PF13489
PF08242
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-13
7.00E-11
1.40E-09
2.10E-08
3.30E-08
WP_004809364.1 1628849 1629572 + 240PF00535
PF13641
PF13632
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
4.10E-11
3.60E-08
5.90E-05
6.90E-04
WP_034423874.1 1629782 1631015 + 410PF07690MFS_1Major Facilitator Superfamily2.10E-27
WP_004809362.1 1632477 1631046 - 476PF00982Glyco_transf_20Glycosyltransferase family 201.30E-95
WP_228127294.1 1633295 1632443 - 283PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
2.00E-26
4.10E-13
5.50E-06
WP_004809360.1 1633857 1634649 + 263PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)2.60E-41

Results for WP_004070957.1 [Desulfobacter postgatei 2ac9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_245531990.1 404948 405092 + 47NO PFAM MATCH---
WP_004070949.1 405088 406519 + 476PF13749HATPase_c_4Putative ATP-dependent DNA helicase recG C-terminal2.70E-19
WP_040015798.1 406520 406850 + 109NO PFAM MATCH---
WP_216594033.1 406921 407587 + 221PF13166AAA_13AAA domain3.80E-28
WP_245532056.1 407666 408845 + 392PF13166AAA_13AAA domain4.10E-73
WP_004070951.1 408841 410098 + 418PF12320
PF00149
PF12850
SbcD_C
Metallophos
Metallophos_2
Type 5 capsule protein repressor C-terminal domain
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase superfamily domain
7.50E-19
1.70E-14
1.40E-07
WP_004070953.1 410109 412896 + 928PF13476
PF13555
AAA_23
AAA_29
AAA domain
P-loop containing region of AAA domain
8.20E-18
1.00E-06
WP_004070955.1 413006 415154 + 715PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
1.20E-30
1.30E-13
WP_004070957.1 415358 417086 + 575PF02624
PF00515
PF07719
PF13424
PF13176
YcaO
TPR_1
TPR_2
TPR_12
TPR_7
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
6.20E-73
4.90E-19
1.40E-12
2.50E-09
2.60E-08
WP_004070959.1 417094 418960 + 621PF13336
PF02550
PF00583
PF00455
PF13302
AcetylCoA_hyd_C
AcetylCoA_hydro
Acetyltransf_1
DeoRC
Acetyltransf_3
Acetyl-CoA hydrolase/transferase C-terminal domain
Acetyl-CoA hydrolase/transferase N-terminal domain
Acetyltransferase (GNAT) family
DeoR C terminal sensor domain
Acetyltransferase (GNAT) domain
7.90E-33
6.00E-18
2.70E-08
5.60E-06
5.20E-04
WP_157488389.1 419666 419216 - 149NO PFAM MATCH---
WP_004070962.1 419954 419753 - 66NO PFAM MATCH---
WP_004070964.1 420051 420603 + 183PF03205
PF01926
PF01656
PF13191
PF01637
MobB
MMR_HSR1
CbiA
AAA_16
ATPase_2
Molybdopterin guanine dinucleotide synthesis protein B
50S ribosome-binding GTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA ATPase domain
ATPase domain predominantly from Archaea
1.90E-46
1.10E-04
2.60E-04
2.80E-04
7.90E-04
WP_245531991.1 420644 421457 + 270NO PFAM MATCH---
WP_040016136.1 422312 421463 - 282PF02569Pantoate_ligasePantoate-beta-alanine ligase1.10E-97
WP_245531992.1 422675 423032 + 118NO PFAM MATCH---
WP_004070970.1 423147 423390 + 80PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system9.20E-19

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_004068676.1 [Pyrococcus furiosus DSM 3638] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244949829.1 1866627 1866051 - 191NO PFAM MATCH---
WP_014835502.1 1867421 1866827 - 197PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-08
3.10E-06
1.60E-05
WP_011013209.1 1867790 1868606 + 271PF01061ABC2_membraneABC-2 type transporter3.40E-08
WP_011013210.1 1868609 1868894 + 94PF12802
PF13412
PF01978
PF01047
PF03965
MarR_2
HTH_24
TrmB
MarR
Penicillinase_R
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
MarR family
Penicillinase repressor
1.80E-07
1.80E-06
2.40E-06
2.80E-06
2.50E-05
WP_011013211.1 1870654 1868899 - 584PF01433Peptidase_M1Peptidase family M1 domain1.40E-13
WP_004068689.1 1872130 1870711 - 472PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-16
1.20E-08
1.50E-08
WP_004068683.1 1874397 1872627 - 589PF01433Peptidase_M1Peptidase family M1 domain1.00E-14
WP_004068677.1 1875395 1874561 - 277PF00881NitroreductaseNitroreductase family2.20E-30
WP_004068676.1 1876711 1875406 - 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.70E-58
WP_004068674.1 1877808 1876707 - 366PF00899
PF01488
ThiF
Shikimate_DH
ThiF family
Shikimate / quinate 5-dehydrogenase
3.90E-19
1.40E-05
WP_223208989.1 1878426 1877820 - 201NO PFAM MATCH---
WP_004068668.1 1879394 1878590 - 267PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.80E-21
5.80E-12
9.00E-05
WP_020953572.1 1879599 1879440 - 52NO PFAM MATCH---
WP_011011118.1 1879775 1880768 + 330PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.90E-23
5.00E-10
4.90E-04
WP_011011119.1 1880931 1882419 + 495PF01637
PF13173
PF13191
PF13412
PF04471
ATPase_2
AAA_14
AAA_16
HTH_24
Mrr_cat
ATPase domain predominantly from Archaea
AAA domain
AAA ATPase domain
Winged helix-turn-helix DNA-binding
Restriction endonuclease
3.60E-12
3.40E-11
2.10E-10
1.70E-05
2.40E-05
WP_011011120.1 1882521 1883016 + 164PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
3.80E-16
2.80E-08
8.80E-05
WP_011011121.1 1883005 1883698 + 230PF00899
PF03435
ThiF
Sacchrp_dh_NADP
ThiF family
Saccharopine dehydrogenase NADP binding domain
1.70E-59
6.60E-04

Results for WP_014845221.1 [Arachnia propionica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_234028360.1 3397346 3398534 + 395PF02655ATP-grasp_3ATP-grasp domain4.20E-04
WP_197720310.1 3398707 3398596 - 36NO PFAM MATCH---
WP_014845228.1 3399112 3398842 - 89PF01402RHH_1Ribbon-helix-helix protein, copG family5.20E-09
WP_014845226.1 3399877 3399523 - 117PF12840
PF01022
HTH_20
HTH_5
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
1.70E-10
1.90E-06
WP_051014886.1 3400105 3401296 + 396PF07690
PF06779
PF05977
PF00083
MFS_1
MFS_4
MFS_3
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Transmembrane secretion effector
Sugar (and other) transporter
2.10E-41
2.50E-11
1.40E-07
7.50E-07
WP_014845224.1 3402030 3401250 - 259PF01497Peripla_BP_2Periplasmic binding protein3.00E-04
WP_041696019.1 3402095 3402815 + 239NO PFAM MATCH---
WP_014845222.1 3403162 3403417 + 84NO PFAM MATCH---
WP_014845221.1 3403442 3404681 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-44
WP_014845220.1 3404685 3405408 + 240PF00881NitroreductaseNitroreductase family3.40E-16
WP_234028411.1 3406359 3405585 - 257PF08282
PF05116
Hydrolase_3
S6PP
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
1.90E-44
2.30E-12
WP_041696016.1 3406430 3407204 + 257PF00455
PF08220
DeoRC
HTH_DeoR
DeoR C terminal sensor domain
DeoR-like helix-turn-helix domain
9.00E-38
1.60E-10
WP_123823979.1 3407335 3408619 + 427PF02720
PF01844
DUF222
HNH
Domain of unknown function (DUF222)
HNH endonuclease
2.40E-12
1.00E-04
WP_014845217.1 3408684 3409158 + 157NO PFAM MATCH---
WP_014845216.1 3410136 3409557 - 192PF01106NifUNifU-like domain4.90E-16
WP_198341735.1 3412013 3410132 - 626PF02421
PF07670
PF07664
PF01926
FeoB_N
Gate
FeoB_C
MMR_HSR1
Ferrous iron transport protein B
Nucleoside recognition
Ferrous iron transport protein B C terminus
50S ribosome-binding GTPase
2.80E-40
5.10E-33
7.90E-18
7.20E-12
WP_041696013.1 3412315 3412069 - 81PF04023FeoAFeoA domain1.30E-16

Results for WP_012052024.1 [Pseudomonas sp. DCB_CB] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003256034.1 64389 62643 - 581PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-176
WP_003256033.1 64704 65022 + 105NO PFAM MATCH---
WP_003256032.1 65030 65231 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_003256031.1 65280 65922 + 213PF01810LysELysE type translocator1.30E-31
WP_003256028.1 66129 66918 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
3.90E-29
7.80E-05
WP_060538061.1 68331 66987 - 447PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
8.00E-25
4.30E-21
4.30E-04
WP_004577479.1 70605 68349 - 751PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
4.90E-34
1.80E-30
2.60E-04
WP_003256023.1 71060 70604 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.20E-22
3.80E-08
1.20E-05
WP_012052024.1 71329 73516 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-73
2.00E-72
7.60E-08
WP_256818977.1 74601 73725 - 291PF20455DUF6708Family of unknown function (DUF6708)2.00E-06
WP_012052026.1 74603 75916 + 437INFERRED GENE---

Results for WP_014863164.1 [Natrinema sp. J7-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049888094.1 714896 715586 + 229PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.20E-15
2.20E-08
WP_008452030.1 715916 715733 - 60NO PFAM MATCH---
WP_008452031.1 716078 716303 + 74PF18545HalOD1Halobacterial output domain 15.20E-20
WP_014863159.1 716610 716817 + 68NO PFAM MATCH---
WP_014863160.1 716893 717343 + 149PF01877RNA_bindingRNA binding4.00E-34
WP_014863161.1 717537 718131 + 197PF13977
PF00440
PF17932
PF17935
PF16859
TetR_C_6
TetR_N
TetR_C_24
TetR_C_27
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
6.60E-22
3.80E-11
9.30E-08
9.60E-06
5.00E-05
WP_014863162.1 718127 719639 + 503PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
2.10E-62
2.10E-08
WP_014863163.1 719784 721023 + 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family1.60E-61
WP_014863164.1 721087 722848 + 586PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.20E-50
WP_008452044.1 723478 722938 - 179NO PFAM MATCH---
WP_014863165.1 723643 724123 + 159PF07883
PF02311
PF05899
Cupin_2
AraC_binding
Cupin_3
Cupin domain
AraC-like ligand binding domain
EutQ-like cupin domain
3.20E-11
3.20E-04
8.90E-04
WP_014863166.1 724271 724883 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
8.30E-21
2.80E-18
6.50E-13
1.30E-06
2.30E-06
WP_014863167.1 726453 724950 - 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
2.10E-139
6.70E-23
5.40E-13
8.40E-09
3.80E-06
WP_014863169.1 726996 727917 + 306PF19107DUF5794Family of unknown function (DUF5794)5.30E-52
WP_014863171.1 729561 728535 - 341NO PFAM MATCH---
WP_014863172.1 729977 731036 + 352PF12483GIDEE3 Ubiquitin ligase7.50E-10
WP_008452058.1 731881 731170 - 236PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
2.40E-07
1.10E-06
8.30E-05

Results for WP_014867322.1 [Methanoculleus bourgensis MS2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014867313.1 1447829 1447673 - 51PF01599Ribosomal_S27Ribosomal protein S27a1.70E-19
WP_014867314.1 1448128 1447834 - 97PF01282Ribosomal_S24eRibosomal protein S24e2.00E-25
WP_014867315.1 1448690 1448204 - 161PF04019DUF359Protein of unknown function (DUF359)2.70E-37
WP_014867316.1 1448890 1448689 - 66PF06093
PF03660
Spt4
PHF5
Spt4/RpoE2 zinc finger
PHF5-like protein
1.90E-12
3.40E-04
WP_014867317.1 1449459 1448889 - 189PF03876
PF00575
SHS2_Rpb7-N
S1
SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
S1 RNA binding domain
9.50E-16
2.10E-11
WP_156147588.1 1449850 1449469 - 126PF18477
PF18480
PIN_9
DUF5615
PIN like domain
Domain of unknown function (DUF5615)
4.00E-27
2.90E-05
WP_014867319.1 1451082 1449846 - 411PF09173
PF00009
PF03144
PF03193
PF01926
eIF2_C
GTP_EFTU
GTP_EFTU_D2
RsgA_GTPase
MMR_HSR1
Initiation factor eIF2 gamma, C terminal
Elongation factor Tu GTP binding domain
Elongation factor Tu domain 2
RsgA GTPase
50S ribosome-binding GTPase
2.00E-32
2.00E-30
2.20E-09
9.10E-05
1.40E-04
WP_014867320.1 1451287 1451710 + 140PF08753
PF01402
NikR_C
RHH_1
NikR C terminal nickel binding domain
Ribbon-helix-helix protein, copG family
1.70E-30
3.80E-07
WP_014867321.1 1451997 1451706 - 96PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)6.80E-23
WP_014867322.1 1452052 1453228 + 391PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-85
WP_014867323.1 1454357 1453385 - 323PF00850Hist_deacetylHistone deacetylase domain8.30E-74
WP_014867324.1 1457000 1454363 - 878PF02516
PF18079
STT3
AglB_L1
Oligosaccharyl transferase STT3 subunit
Archaeal glycosylation protein B long peripheral domain
5.50E-22
2.00E-12
WP_014867325.1 1458227 1457084 - 380PF13692
PF13439
PF13579
PF00534
PF13524
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
Glycosyl transferases group 1
4.20E-19
1.50E-14
2.20E-12
1.10E-10
2.00E-06
WP_014867326.1 1458427 1458244 - 60PF01041DegT_DnrJ_EryC1DegT/DnrJ/EryC1/StrS aminotransferase family2.40E-10
WP_014867327.1 1459017 1458423 - 197PF00132
PF14602
Hexapep
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
2.60E-26
4.70E-18
WP_014867328.1 1460753 1459013 - 579PF01380
PF13522
PF13537
SIS
GATase_6
GATase_7
SIS domain
Glutamine amidotransferase domain
Glutamine amidotransferase domain
6.30E-48
1.30E-24
9.90E-20
WP_014867329.1 1461904 1460752 - 383PF00483
PF00132
PF12804
PF01128
PF14602
NTP_transferase
Hexapep
NTP_transf_3
IspD
Hexapep_2
Nucleotidyl transferase
Bacterial transferase hexapeptide (six repeats)
MobA-like NTP transferase domain
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Hexapeptide repeat of succinyl-transferase
7.20E-34
1.30E-19
3.70E-19
3.70E-07
6.30E-04
WP_014867330.1 1463108 1461908 - 399PF00483
PF00132
PF12804
PF14602
NTP_transferase
Hexapep
NTP_transf_3
Hexapep_2
Nucleotidyl transferase
Bacterial transferase hexapeptide (six repeats)
MobA-like NTP transferase domain
Hexapeptide repeat of succinyl-transferase
4.10E-38
2.80E-17
5.90E-15
1.50E-07

Results for WP_014868055.1 [Methanoculleus bourgensis MS2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014868046.1 2245749 2246655 + 301PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.10E-27
6.80E-10
3.20E-05
WP_014868047.1 2246658 2247774 + 371PF12679
PF13346
PF12698
ABC2_membrane_2
ABC2_membrane_5
ABC2_membrane_3
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 family transporter protein
5.50E-43
7.70E-05
7.80E-04
WP_014868048.1 2247770 2249189 + 472PF10633
PF13620
PF01345
PF07705
PF08308
NPCBM_assoc
CarboxypepD_reg
DUF11
CARDB
PEGA
NPCBM-associated, NEW3 domain of alpha-galactosidase
Carboxypeptidase regulatory-like domain
Domain of unknown function DUF11
CARDB
PEGA domain
1.80E-24
5.40E-13
9.00E-06
8.00E-05
2.90E-04
WP_014868049.1 2253256 2250469 - 928PF00989
PF00072
PF13426
PF08447
PF08448
PAS
Response_reg
PAS_9
PAS_3
PAS_4
PAS fold
Response regulator receiver domain
PAS domain
PAS fold
PAS fold
1.40E-24
1.30E-22
7.00E-22
1.10E-21
1.00E-18
WP_014868050.1 2253464 2254172 + 235PF16289
PF18476
PIN_12
PIN_8
PIN domain
PIN like domain
2.70E-22
6.80E-08
WP_014868052.1 2255677 2256412 + 244PF00899ThiFThiF family7.50E-60
WP_014868053.1 2256425 2256704 + 92PF02597ThiSThiS family4.10E-15
WP_014868054.1 2256710 2257127 + 138PF02391MoaEMoaE protein9.50E-35
WP_014868055.1 2257123 2258338 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-94
WP_014868056.1 2258297 2258987 + 229PF07812TfuATfuA-like protein3.90E-47
WP_014868057.1 2259060 2259306 + 81NO PFAM MATCH---
WP_242405139.1 2260143 2260464 + 106PF01022
PF01978
PF13412
PF12840
PF12802
HTH_5
TrmB
HTH_24
HTH_20
MarR_2
Bacterial regulatory protein, arsR family
Sugar-specific transcriptional regulator TrmB
Winged helix-turn-helix DNA-binding
Helix-turn-helix domain
MarR family
1.30E-08
5.20E-06
4.50E-05
2.90E-04
4.80E-04
WP_014868061.1 2260450 2260774 + 107PF01925TauESulfite exporter TauE/SafE3.30E-04
WP_014868062.1 2261356 2262649 + 430PF00016
PF02788
RuBisCO_large
RuBisCO_large_N
Ribulose bisphosphate carboxylase large chain, catalytic domain
Ribulose bisphosphate carboxylase large chain, N-terminal domain
5.10E-85
7.10E-39
WP_014868063.1 2263343 2262671 - 223PF17884DUF5591Domain of unknown function (DUF5591)8.00E-14
WP_014868064.1 2265032 2265488 + 151PF02915
PF09537
PF13668
Rubrerythrin
DUF2383
Ferritin_2
Rubrerythrin
Domain of unknown function (DUF2383)
Ferritin-like domain
1.10E-17
1.80E-07
2.50E-04
WP_014868065.1 2265725 2267918 + 730PF00989
PF13426
PF08448
PF08447
PF13188
PAS
PAS_9
PAS_4
PAS_3
PAS_8
PAS fold
PAS domain
PAS fold
PAS fold
PAS domain
7.70E-37
1.40E-33
3.30E-33
3.90E-29
1.90E-26

Results for WP_004319383.1 [Bacteroides caccae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004319406.1 179817 177693 - 707PF00005
PF00664
PF03412
PF02463
PF13304
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
ABC transporter
ABC transporter transmembrane region
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
5.90E-31
9.30E-29
1.80E-22
1.80E-08
1.80E-05
WP_004319400.1 181312 180646 - 221NO PFAM MATCH---
WP_004319396.1 182094 181482 - 203NO PFAM MATCH---
WP_004319394.1 184467 182178 - 762PF14905
PF13715
PF13620
OMP_b-brl_3
CarbopepD_reg_2
CarboxypepD_reg
Outer membrane protein beta-barrel family
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
2.90E-48
6.80E-09
3.30E-06
WP_004319392.1 185964 184515 - 482PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.00E-16
1.60E-11
2.50E-10
WP_004319390.1 186437 185981 - 151NO PFAM MATCH---
WP_044917720.1 188629 186439 - 729PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
3.30E-36
8.00E-32
5.20E-25
4.40E-07
5.00E-06
WP_004319385.1 188910 188736 - 57NO PFAM MATCH---
WP_004319383.1 190837 188977 - 619PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-49
WP_004319381.1 192179 191978 - 66NO PFAM MATCH---
WP_004319379.1 193563 192300 - 420NO PFAM MATCH---
WP_004319377.1 196021 193837 - 727PF02534
PF10412
PF12696
PF14293
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
YWFCY
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
TraM recognition site of TraD and TraG
YWFCY protein
2.00E-15
1.70E-13
4.90E-13
3.60E-08
WP_080599531.1 196684 196039 - 214PF07603DUF1566Protein of unknown function (DUF1566)8.40E-04
WP_004319373.1 197388 196866 - 173NO PFAM MATCH---
WP_004319371.1 198245 197399 - 281PF13595DUF4138Domain of unknown function (DUF4138)4.40E-56
WP_004319369.1 199627 198376 - 416PF12508Transposon_TraMConjugative transposon, TraM1.20E-56
WP_004319367.1 199946 199604 - 113NO PFAM MATCH---

Results for WP_003594968.1 [Rhizobium leguminosarum bv. trifolii WSM597] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003594954.1 322563 319980 - 860PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
2.00E-31
4.60E-26
WP_003594955.1 324086 322808 - 425PF13378
PF07476
PF02746
MR_MLE_C
MAAL_C
MR_MLE_N
Enolase C-terminal domain-like
Methylaspartate ammonia-lyase C-terminus
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
1.10E-61
7.40E-05
9.30E-05
WP_003594957.1 324900 324165 - 244PF13561
PF00106
PF01370
PF00107
PF08659
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
KR domain
5.80E-58
4.70E-45
2.60E-06
2.80E-05
2.30E-04
WP_003594958.1 325204 325990 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
3.70E-13
4.90E-11
7.80E-08
2.20E-06
7.20E-05
WP_003594960.1 326066 326903 + 278PF04909Amidohydro_2Amidohydrolase2.00E-40
WP_003594961.1 327105 327510 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.70E-07
3.30E-06
WP_003594963.1 327808 327541 - 88NO PFAM MATCH---
WP_003594965.1 328617 327873 - 247PF07812TfuATfuA-like protein2.10E-38
WP_003594968.1 329876 328613 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-67
WP_003594970.1 330033 329889 - 47NO PFAM MATCH---
WP_037074344.1 332090 330137 - 650PF03704
PF07719
PF00515
PF13428
PF13424
BTAD
TPR_2
TPR_1
TPR_14
TPR_12
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.00E-15
8.50E-11
1.70E-09
1.70E-09
3.20E-09
WP_003594974.1 333233 332336 - 298PF01729
PF02749
QRPTase_C
QRPTase_N
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
2.10E-59
7.10E-28
WP_003594976.1 334794 333234 - 519PF00890
PF01266
PF02910
PF00732
FAD_binding_2
DAO
Succ_DH_flav_C
GMC_oxred_N
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
GMC oxidoreductase
1.30E-78
5.20E-06
5.90E-05
8.10E-04
WP_003594978.1 335762 334790 - 323PF02445NadAQuinolinate synthetase A protein1.40E-112
WP_172643323.1 336758 335828 - 309PF19368AraR_CAraR C-terminal winged HTH domain2.50E-07
WP_003594981.1 337939 337126 - 270PF02548Pantoate_transfKetopantoate hydroxymethyltransferase1.70E-41
WP_003594983.1 339208 337981 - 408PF07992
PF14759
PF00070
PF01266
PF03486
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
1.30E-63
4.00E-22
1.70E-18
3.30E-05
1.40E-04

Results for WP_003548769.1 [Rhizobium leguminosarum bv. viciae WSM1455] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003548754.1 5507586 5508594 + 335PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
9.80E-28
1.60E-13
WP_003548756.1 5508595 5509732 + 378PF00528
PF12911
BPD_transp_1
OppC_N
Binding-protein-dependent transport system inner membrane component
N-terminal TM domain of oligopeptide transport permease C
2.90E-16
1.40E-12
WP_003548758.1 5509742 5511410 + 555PF00005
PF02463
PF13304
PF13191
PF13401
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
1.40E-63
1.10E-17
2.00E-14
3.00E-08
4.00E-08
WP_003548761.1 5511432 5512803 + 456PF02056
PF11975
Glyco_hydro_4
Glyco_hydro_4C
Family 4 glycosyl hydrolase
Family 4 glycosyl hydrolase C-terminal domain
8.10E-68
2.10E-64
WP_003548763.1 5513265 5512899 - 121NO PFAM MATCH---
WP_003548764.1 5513765 5513288 - 158NO PFAM MATCH---
WP_003548766.1 5514994 5513785 - 402NO PFAM MATCH---
WP_003548768.1 5515813 5515048 - 254PF07812TfuATfuA-like protein2.70E-38
WP_003548769.1 5516954 5515805 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-43
WP_003548771.1 5519956 5516968 - 995PF00211
PF13191
PF13424
PF17874
Guanylate_cyc
AAA_16
TPR_12
TPR_MalT
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
Tetratricopeptide repeat
MalT-like TPR region
9.60E-21
4.00E-19
2.70E-05
6.80E-04
WP_018497059.1 5520149 5520701 + 184INFERRED GENE---
WP_085996083.1 5521054 5521267 + 70PF06169DUF982Protein of unknown function (DUF982)7.60E-19
WP_003548774.1 5521331 5521538 + 68NO PFAM MATCH---
WP_003548781.1 5521750 5521972 + 73NO PFAM MATCH---
WP_003548784.1 5522504 5522321 - 60NO PFAM MATCH---
WP_003548786.1 5523037 5522902 - 44NO PFAM MATCH---
WP_003548788.1 5524114 5523640 - 157PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase9.00E-49

Results for WP_008733937.1 [Actinomyces massiliensis F0489] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008733916.1 244 0 - 81PF03551PadRTranscriptional regulator PadR-like family9.30E-19
WP_008733926.1 1237 532 - 234PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
2.10E-20
2.90E-18
3.80E-06
WP_008733937.1 1713 3090 + 458PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-63
WP_008733929.1 3108 3762 + 217NO PFAM MATCH---
WP_008733922.1 3762 5733 + 656NO PFAM MATCH---
WP_008733911.1 5722 6439 + 238NO PFAM MATCH---
WP_157787101.1 6680 6842 + 53NO PFAM MATCH---
WP_008733920.1 6884 8051 + 388PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)5.70E-05
WP_008733930.1 8050 10867 + 938NO PFAM MATCH---
WP_008733915.1 10950 11913 + 320PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-23
WP_039897857.1 12602 12092 - 169PF02082Rrf2Iron-dependent Transcriptional regulator1.60E-29

Results for WP_003542094.1 [Rhizobium leguminosarum bv. viciae WSM1481] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017989158.1 1537362 1538583 + 406PF00535
PF13641
PF13506
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family group 2
1.50E-22
3.70E-19
1.50E-06
3.00E-06
WP_026159979.1 1538576 1541579 + 1000PF00535
PF05401
PF01522
PF13641
PF13649
Glycos_transf_2
NodS
Polysacc_deac_1
Glyco_tranf_2_3
Methyltransf_25
Glycosyl transferase family 2
Nodulation protein S (NodS)
Polysaccharide deacetylase
Glycosyltransferase like family 2
Methyltransferase domain
9.10E-30
2.20E-25
4.00E-18
9.10E-15
3.30E-12
WP_017989160.1 1541586 1542663 + 358PF00535
PF10111
PF13641
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
7.10E-32
2.10E-17
7.00E-16
WP_003542081.1 1542655 1544410 + 584PF00005
PF00664
PF02463
PF13555
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA ATPase domain
1.90E-29
1.20E-11
8.90E-06
1.10E-04
3.10E-04
WP_017989161.1 1544406 1545531 + 374PF00535
PF10111
PF13641
PF13704
PF13506
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family 21
1.80E-36
4.10E-24
4.90E-22
2.60E-06
1.30E-05
WP_003542083.1 1546847 1547054 + 68NO PFAM MATCH---
WP_003542090.1 1547712 1547463 - 82NO PFAM MATCH---
WP_003542092.1 1548522 1547814 - 235PF07812TfuATfuA-like protein4.80E-43
WP_003542094.1 1549727 1548518 - 402PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.40E-62
WP_003542097.1 1549982 1549769 - 70NO PFAM MATCH---
WP_017989162.1 1551850 1550002 - 615PF14559TPR_19Tetratricopeptide repeat2.00E-04
WP_003542102.1 1552285 1551859 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
3.70E-12
6.20E-08
2.00E-07
1.60E-04
WP_017989163.1 1553151 1552458 - 230PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.80E-21
1.70E-15
3.60E-13
1.80E-10
1.90E-09
WP_017989164.1 1553677 1554568 + 296PF19495DUF6030Family of unknown function (DUF6030)6.70E-62
WP_017989165.1 1555039 1554598 - 146NO PFAM MATCH---
WP_003542108.1 1555177 1556251 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 106.20E-69
WP_003542111.1 1556282 1557434 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
8.80E-29
1.00E-24
1.80E-12
9.90E-09
3.70E-06

Results for WP_004040722.1 [Methanofollis liminatans DSM 4140] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004040705.1 2396586 2397180 + 197PF00132
PF14602
Hexapep
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
6.20E-24
1.10E-10
WP_004040706.1 2397181 2398255 + 357PF01041
PF00155
PF01212
PF00266
PF01053
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Aminotransferase class-V
Cys/Met metabolism PLP-dependent enzyme
1.70E-128
5.40E-08
3.00E-04
5.50E-04
8.30E-04
WP_004040708.1 2398254 2399172 + 305PF01408
PF03446
PF02826
GFO_IDH_MocA
NAD_binding_2
2-Hacid_dh_C
Oxidoreductase family, NAD-binding Rossmann fold
NAD binding domain of 6-phosphogluconate dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
4.60E-20
2.70E-08
1.40E-04
WP_004040710.1 2399224 2400658 + 477PF03721
PF00984
PF03720
UDPG_MGDP_dh_N
UDPG_MGDP_dh
UDPG_MGDP_dh_C
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
7.00E-33
1.00E-20
1.60E-17
WP_004040714.1 2400766 2401390 + 207PF00132HexapepBacterial transferase hexapeptide (six repeats)3.70E-08
WP_004040716.1 2401433 2402570 + 378PF13692
PF13439
PF13579
PF00534
PF13477
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_4_2
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
Glycosyl transferase 4-like
5.60E-17
6.50E-14
3.40E-13
4.90E-10
2.00E-05
WP_004040718.1 2402658 2405220 + 853PF02516
PF18079
STT3
AglB_L1
Oligosaccharyl transferase STT3 subunit
Archaeal glycosylation protein B long peripheral domain
8.10E-28
8.90E-12
WP_245529367.1 2405264 2406203 + 312PF00850Hist_deacetylHistone deacetylase domain5.30E-79
WP_004040722.1 2407372 2406199 - 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-81
WP_004040724.1 2407426 2407714 + 95PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)6.10E-23
WP_004040725.1 2408139 2407710 - 142PF08753
PF01402
NikR_C
RHH_1
NikR C terminal nickel binding domain
Ribbon-helix-helix protein, copG family
2.30E-31
1.20E-09
WP_048103870.1 2408329 2409565 + 411PF09173
PF00009
PF03144
PF03193
eIF2_C
GTP_EFTU
GTP_EFTU_D2
RsgA_GTPase
Initiation factor eIF2 gamma, C terminal
Elongation factor Tu GTP binding domain
Elongation factor Tu domain 2
RsgA GTPase
9.80E-33
1.30E-29
1.50E-05
2.90E-04
WP_004040727.1 2409561 2409942 + 126PF18477PIN_9PIN like domain1.00E-30
WP_004040728.1 2409943 2410519 + 191PF03876
PF00575
PF08292
SHS2_Rpb7-N
S1
RNA_pol_Rbc25
SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
S1 RNA binding domain
RNA polymerase III subunit Rpc25
1.30E-17
1.80E-11
1.50E-04
WP_004040729.1 2410502 2410709 + 68PF06093Spt4Spt4/RpoE2 zinc finger3.00E-12
WP_004040730.1 2410708 2411194 + 161PF04019DUF359Protein of unknown function (DUF359)1.90E-35
WP_004040731.1 2411257 2411551 + 97PF01282Ribosomal_S24eRibosomal protein S24e1.00E-20
WP_004040732.1 2411552 2411738 + 61PF01599Ribosomal_S27Ribosomal protein S27a1.30E-20

Results for WP_007710602.1 back to top

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Couldn't process WP_007710602.1 Genbank filestream. May be corrupt.

Results for WP_003548233.1 [Rhizobium leguminosarum bv. viciae WSM1455] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003548212.1 5168781 5166201 - 859PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
6.50E-31
8.00E-28
WP_003548220.1 5170281 5169003 - 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
7.20E-59
1.20E-04
3.70E-04
WP_032987783.1 5171111 5170376 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
1.20E-55
6.20E-43
1.50E-05
6.60E-05
WP_003548224.1 5171564 5172350 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.80E-13
5.20E-11
7.80E-08
2.40E-06
7.20E-05
WP_003548225.1 5172422 5173259 + 278PF04909Amidohydro_2Amidohydrolase3.10E-41
WP_003548227.1 5173461 5173866 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.30E-07
3.50E-06
WP_003548229.1 5174214 5173947 - 88NO PFAM MATCH---
WP_003548231.1 5175024 5174280 - 247PF07812TfuATfuA-like protein5.00E-39
WP_003548233.1 5176283 5175020 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-67
WP_003548235.1 5176440 5176296 - 47NO PFAM MATCH---
WP_157223183.1 5178537 5176545 - 663PF03704
PF14559
PF13432
PF00515
PF07719
BTAD
TPR_19
TPR_16
TPR_1
TPR_2
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.70E-15
5.40E-12
2.20E-09
3.40E-09
4.90E-09
WP_003548240.1 5179518 5178759 - 252PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.50E-20
WP_245271980.1 5180510 5179544 - 321PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
2.50E-32
5.60E-24
8.00E-13
2.50E-06
WP_003548252.1 5181135 5180694 - 146PF00903
PF13669
PF13468
PF18029
PF12681
Glyoxalase
Glyoxalase_4
Glyoxalase_3
Glyoxalase_6
Glyoxalase_2
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
Glyoxalase-like domain
Glyoxalase-like domain
1.80E-20
5.00E-11
3.40E-09
8.50E-07
1.20E-06
WP_003548254.1 5182078 5181265 - 270PF00248Aldo_ket_redAldo/keto reductase family1.10E-36
WP_032986887.1 5182257 5183154 + 298PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.00E-15
WP_003548256.1 5183150 5184089 + 312PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.90E-13

Results for WP_007832764.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_004147805.1 [Klebsiella pneumoniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002898170.1 1301583 1299834 - 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.30E-60
4.10E-37
1.20E-09
5.60E-06
4.60E-05
WP_023284913.1 1303884 1301619 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
3.40E-51
2.10E-18
2.10E-04
7.50E-04
WP_002898165.1 1304377 1304089 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.20E-08
9.40E-05
WP_002898162.1 1306202 1304528 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
5.10E-12
2.70E-06
WP_002898160.1 1307019 1306335 - 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
5.70E-83
5.10E-08
WP_002898157.1 1308477 1307193 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.50E-152
WP_002898155.1 1309639 1308550 - 362PF00266Aminotran_5Aminotransferase class-V4.00E-70
WP_002898152.1 1310520 1309827 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_004147805.1 1310635 1312396 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.40E-84
1.40E-67
WP_002898150.1 1312781 1313639 + 285PF01226Form_Nir_transFormate/nitrite transporter1.60E-74
WP_004191136.1 1313690 1315973 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.10E-207
1.60E-43
WP_002898145.1 1316164 1316905 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.90E-32
7.90E-19
2.50E-06
WP_025861635.1 1318216 1317067 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.00E-26
9.40E-10
2.30E-07
1.60E-04
WP_032443822.1 1319354 1318490 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.40E-113
WP_004150845.1 1319973 1319355 - 205PF13247
PF12797
PF13187
PF00037
PF12838
Fer4_11
Fer4_2
Fer4_9
Fer4
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
5.10E-28
3.40E-13
3.30E-12
4.60E-12
1.90E-11
WP_004147794.1 1322422 1319983 - 812PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
3.20E-108
1.30E-28
3.50E-18
WP_002898139.1 1323915 1322622 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
2.50E-33

Results for WP_007795613.1 [Rhizobium sp. CF122] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
PMI09_RS15140 0 2581 + 860INFERRED GENE---
WP_013845244.1 2898 3093 + 65INFERRED GENE---
WP_007795598.1 3535 3331 - 67PF10931DUF2735Protein of unknown function (DUF2735)3.70E-11
WP_007795602.1 4021 5062 + 346PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
6.50E-17
1.70E-15
WP_037083244.1 5302 7249 + 648PF07719
PF13432
PF03704
PF13428
PF14559
TPR_2
TPR_16
BTAD
TPR_14
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
1.60E-10
5.80E-10
1.20E-09
7.20E-08
3.00E-06
WP_007795613.1 7517 8777 + 419PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-68
WP_007795616.1 8773 9520 + 248PF07812TfuATfuA-like protein5.70E-40
WP_007795619.1 9591 9861 + 89NO PFAM MATCH---
WP_007795623.1 10284 9891 - 130PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
8.40E-12
4.30E-07
7.90E-07
WP_007795626.1 10523 11591 + 355PF13437
PF16576
PF13533
PF12685
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
SpoIIIAH
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
SpoIIIAH-like protein
Biotin-requiring enzyme
3.60E-16
4.30E-13
2.70E-11
1.30E-05
2.70E-05
WP_007795629.1 11587 14359 + 923PF00005
PF12698
PF13304
PF12679
PF01061
ABC_tran
ABC2_membrane_3
AAA_21
ABC2_membrane_2
ABC2_membrane
ABC transporter
ABC-2 family transporter protein
AAA domain, putative AbiEii toxin, Type IV TA system
ABC-2 family transporter protein
ABC-2 type transporter
2.80E-56
1.10E-34
3.90E-21
7.10E-15
2.20E-13
WP_007795632.1 14361 15474 + 370PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
2.30E-30
4.90E-25
1.60E-13
3.60E-06
WP_007795635.1 15581 16457 + 291PF19368AraR_CAraR C-terminal winged HTH domain2.90E-08
WP_037083201.1 16972 16615 - 118NO PFAM MATCH---

Results for WP_007875723.1 [Herbaspirillum sp. CF444] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007875723.1 2196 0 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-72
3.00E-71
2.40E-08
WP_007875726.1 3916 2335 - 526PF00958
PF00117
PF02540
PF07722
PF03054
GMP_synt_C
GATase
NAD_synthase
Peptidase_C26
tRNA_Me_trans
GMP synthase C terminal domain
Glutamine amidotransferase class-I
NAD synthase
Peptidase C26
tRNA methyl transferase HUP domain
3.70E-43
5.40E-38
6.00E-11
4.60E-10
6.40E-05
WP_007875727.1 5481 4020 - 486PF00478
PF03060
PF00571
PF01070
PF00977
IMPDH
NMO
CBS
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
Nitronate monooxygenase
CBS domain
FMN-dependent dehydrogenase
Histidine biosynthesis protein
3.20E-165
2.60E-16
3.30E-16
2.70E-08
3.00E-04
WP_007875728.1 5936 5642 - 97PF03658Ub-RnfHRnfH family Ubiquitin3.50E-31
WP_007875729.1 6360 5928 - 143PF03364
PF10604
Polyketide_cyc
Polyketide_cyc2
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
1.10E-29
2.00E-08
WP_007875730.1 6428 6878 + 149PF01668SmpBSmpB protein5.10E-58
WP_007875733.1 8505 6900 - 534PF00515
PF07719
PF13181
PF13432
PF13414
TPR_1
TPR_2
TPR_8
TPR_16
TPR_11
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
2.20E-24
2.70E-21
1.50E-16
7.70E-14
1.60E-13
WP_007875737.1 9291 8583 - 235NO PFAM MATCH---
WP_007875739.1 9724 10414 + 229PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.40E-28
1.30E-18

Results for WP_007812116.1 [Rhizobium sp. CF142] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007812100.1 36139 36943 + 267PF02548Pantoate_transfKetopantoate hydroxymethyltransferase2.20E-42
WP_007812101.1 37042 37939 + 298PF19368AraR_CAraR C-terminal winged HTH domain1.50E-08
WP_007812103.1 38010 38982 + 323PF02445NadAQuinolinate synthetase A protein1.00E-112
WP_007812105.1 38978 40523 + 514PF00890
PF01266
PF02910
FAD_binding_2
DAO
Succ_DH_flav_C
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
2.40E-78
3.20E-06
1.20E-05
WP_007812107.1 40524 41424 + 299PF01729
PF02749
QRPTase_C
QRPTase_N
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
3.40E-59
2.60E-26
WP_051034515.1 41644 42457 + 270PF00248Aldo_ket_redAldo/keto reductase family9.80E-40
WP_244430514.1 42831 44724 + 630PF03704
PF07719
PF14559
PF00515
PF13428
BTAD
TPR_2
TPR_19
TPR_1
TPR_14
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.80E-13
3.50E-10
1.10E-09
1.00E-07
1.00E-07
WP_007812114.1 44826 44970 + 47NO PFAM MATCH---
WP_007812116.1 44983 46246 + 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-67
WP_007812118.1 46242 46989 + 248PF07812TfuATfuA-like protein3.70E-39
WP_007812121.1 47047 47314 + 88NO PFAM MATCH---
WP_007812123.1 47768 47360 - 135PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
5.90E-11
1.80E-06
4.10E-05
WP_007812125.1 48812 47987 - 274PF04909Amidohydro_2Amidohydrolase5.50E-40
WP_007812128.1 49676 48890 - 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.30E-12
3.80E-11
5.20E-08
2.40E-06
3.60E-05
WP_007812130.1 50044 50779 + 244PF13561
PF00106
PF01370
adh_short_C2
adh_short
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
1.50E-54
1.40E-43
1.40E-05
WP_007812133.1 50839 52117 + 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
4.30E-58
1.20E-06
7.70E-05
WP_007812135.1 52868 54089 + 406PF13614
PF01656
PF09140
PF10609
PF06564
AAA_31
CbiA
MipZ
ParA
CBP_BcsQ
AAA domain
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
NUBPL iron-transfer P-loop NTPase
Cellulose biosynthesis protein BcsQ
6.10E-39
1.20E-20
6.50E-13
3.50E-09
6.00E-09

Results for WP_008021248.1 [Pseudomonas sp. GM55] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016969335.1 33022 33145 + 41INFERRED GENE---
WP_008021224.1 33418 33205 - 70NO PFAM MATCH---
WP_008021227.1 33801 34323 + 173PF11454DUF3016Protein of unknown function (DUF3016)1.30E-40
WP_008021228.1 34794 34413 - 126NO PFAM MATCH---
WP_011334757.1 35531 35702 + 57INFERRED GENE---
WP_008021237.1 36237 36468 + 76NO PFAM MATCH---
WP_008021244.1 38039 36647 - 463PF00171AldedhAldehyde dehydrogenase family9.60E-138
WP_008021246.1 38139 39018 + 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.80E-40
5.70E-17
WP_008021248.1 39095 41300 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.90E-72
4.00E-71
2.20E-08

Results for WP_007887476.1 [Pantoea sp. GM01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007887426.1 103720 102718 - 333PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase8.30E-117
WP_007887429.1 105465 103716 - 582PF00664
PF00005
PF02463
PF00270
PF01935
ABC_membrane
ABC_tran
SMC_N
DEAD
DUF87
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Helicase HerA, central domain
7.60E-59
5.90E-35
1.00E-10
4.80E-06
6.60E-04
WP_007887432.1 107758 105499 - 752PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.60E-46
1.10E-14
8.40E-05
WP_003849360.1 108248 107963 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_049851017.1 110011 108334 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
6.10E-13
2.40E-07
WP_007887471.1 110813 110132 - 226PF02224
PF13189
PF13238
PF00005
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
AAA domain
1.60E-82
2.60E-08
4.30E-04
7.00E-04
7.20E-04
WP_007887474.1 112298 111011 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.40E-148
WP_007887475.1 113465 112379 - 361PF00266Aminotran_5Aminotransferase class-V4.40E-64
WP_007887476.1 113775 115539 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.10E-82
1.20E-67
WP_007887477.1 115895 116756 + 286PF01226Form_Nir_transFormate/nitrite transporter9.20E-73
WP_007887486.1 116825 119108 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.90E-205
6.30E-44
WP_007887488.1 119269 120010 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.60E-31
1.70E-17
1.70E-05
WP_036620530.1 121217 120065 - 383PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
7.00E-29
8.70E-08
1.30E-06
WP_007887492.1 122823 121530 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.30E-36
1.40E-33
WP_007887493.1 124267 122920 - 448PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
8.90E-63
2.40E-24
4.30E-16
6.10E-14
1.60E-06
WP_007887494.1 124886 124274 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
2.20E-54
3.60E-04
WP_007887496.1 128451 125061 - 1129PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.90E-74
7.80E-44
1.00E-28
9.40E-28
1.10E-05

Results for WP_008115974.1 [Herbaspirillum sp. YR522] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_157221519.1 52096 51694 - 133NO PFAM MATCH---
WP_157221520.1 52962 52503 - 152NO PFAM MATCH---
WP_157221521.1 53996 53777 - 72NO PFAM MATCH---
WP_157221522.1 54283 53992 - 96NO PFAM MATCH---
WP_008115966.1 55427 54503 - 307PF01904DUF72Protein of unknown function DUF723.80E-64
WP_008115967.1 56648 55469 - 392PF06276FhuFFerric iron reductase FhuF-like transporter1.40E-15
WP_008115970.1 56916 58962 + 681PF00082Peptidase_S8Subtilase family2.40E-40
WP_008115972.1 58985 60098 + 370PF00753Lactamase_BMetallo-beta-lactamase superfamily1.50E-06
WP_008115974.1 62333 60134 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-72
7.50E-72
5.20E-08
WP_008115976.1 63237 62493 - 247PF13561
PF00106
PF08659
PF01370
PF13399
adh_short_C2
adh_short
KR
Epimerase
LytR_C
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
LytR cell envelope-related transcriptional attenuator
6.50E-60
3.50E-51
8.20E-15
3.60E-05
7.40E-05
WP_008115979.1 63378 64302 + 307PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-41
2.50E-16
WP_157221524.1 64648 65617 + 322NO PFAM MATCH---
WP_008115983.1 66263 65714 - 182NO PFAM MATCH---
WP_008115985.1 66652 66277 - 124PF07963N_methylProkaryotic N-terminal methylation motif6.10E-10
WP_008115986.1 67137 66660 - 158PF07963N_methylProkaryotic N-terminal methylation motif4.20E-08
WP_008115988.1 69482 67133 - 782PF00263
PF03958
PF07660
PF00963
PF19271
Secretin
Secretin_N
STN
Cohesin
Nis1
Bacterial type II and III secretion system protein
Bacterial type II/III secretion system short domain
Secretin and TonB N terminus short domain
Cohesin domain
Nis1 family
2.20E-39
5.00E-07
1.10E-06
4.00E-05
9.30E-04
WP_008115989.1 70033 69478 - 184NO PFAM MATCH---

Results for WP_008073894.1 [Pseudomonas sp. FW300-N1B4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063342387.1 4767501 4768083 + 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)3.60E-44
WP_008073905.1 4768107 4768806 + 232PF04012PspA_IM30PspA/IM30 family1.50E-42
WP_063342386.1 4768962 4769526 + 187PF01694RhomboidRhomboid family1.00E-20
WP_008073902.1 4769595 4770630 + 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
7.70E-11
4.80E-04
WP_008073900.1 4770616 4771291 + 224PF10679DUF2491Protein of unknown function (DUF2491)9.00E-42
WP_008073898.1 4771306 4771735 + 142PF03994DUF350Domain of Unknown Function (DUF350)2.30E-21
WP_007896804.1 4771754 4772480 + 241PF06693DUF1190Protein of unknown function (DUF1190)1.70E-30
WP_063342385.1 4772492 4773650 + 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp1.60E-137
WP_008073894.1 4773755 4775960 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.20E-73
1.80E-72
1.80E-07
WP_063342384.1 4776551 4776029 - 173PF00436SSBSingle-strand binding protein family6.80E-38
WP_063342383.1 4777958 4776560 - 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
4.40E-44
6.60E-08
4.30E-05
WP_063342382.1 4778149 4780984 + 944PF17760
PF17755
PF00005
PF02463
PF13191
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
UvrA interaction domain
UvrA DNA-binding domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.50E-38
9.90E-35
9.80E-21
2.30E-10
1.30E-07
WP_007896795.1 4781512 4781047 - 154PF00210FerritinFerritin-like domain4.60E-35
WP_008073886.1 4783116 4781667 - 482PF00199
PF06628
Catalase
Catalase-rel
Catalase
Catalase-related immune-responsive
4.30E-195
6.90E-22
WP_007896790.1 4783742 4783355 - 128PF01196Ribosomal_L17Ribosomal protein L177.40E-34
WP_003186012.1 4784786 4783784 - 333PF01000
PF03118
PF01193
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA polymerase Rpb3/RpoA insert domain
Bacterial RNA polymerase, alpha chain C terminal domain
RNA polymerase Rpb3/Rpb11 dimerisation domain
2.60E-26
4.50E-24
1.90E-22
WP_003176404.1 4785429 4784808 - 206PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
3.70E-31
6.80E-18

Results for WP_008003781.1 [Pseudomonas sp. GM49] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008003766.1 51361 50452 - 302PF01380
PF01418
SIS
HTH_6
SIS domain
Helix-turn-helix domain, rpiR family
5.00E-17
5.60E-13
WP_008003768.1 52212 51447 - 254PF00005
PF13304
PF02463
PF13555
PF13166
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_13
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
5.10E-33
5.70E-10
1.10E-06
5.10E-04
8.50E-04
WP_008003769.1 53343 52230 - 370PF04952
PF00246
AstE_AspA
Peptidase_M14
Succinylglutamate desuccinylase / Aspartoacylase family
Zinc carboxypeptidase
1.20E-22
6.40E-04
WP_008003771.1 54050 53351 - 232PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component5.90E-12
WP_008003773.1 54754 54064 - 229PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.70E-19
WP_008003774.1 55623 54846 - 258PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
8.10E-60
1.10E-06
WP_008003777.1 57333 55941 - 463PF00171AldedhAldehyde dehydrogenase family3.00E-137
WP_008003779.1 57433 58312 + 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.00E-40
5.00E-17
WP_008003781.1 58389 60594 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-71
5.70E-71
2.90E-08

Results for WP_008086379.1 [Pseudomonas sp. GM80] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008086364.1 1945 1603 - 113NO PFAM MATCH---
WP_008086366.1 2676 2031 - 214PF13230GATase_4Glutamine amidotransferases class-II3.60E-05
WP_008086367.1 2846 3095 + 82NO PFAM MATCH---
WP_008086370.1 3289 4447 + 385PF00990GGDEFDiguanylate cyclase, GGDEF domain1.60E-38
WP_008086372.1 4455 4950 + 164NO PFAM MATCH---
WP_017338166.1 4946 5458 + 170INFERRED GENE---
WP_008086376.1 5588 6038 + 149NO PFAM MATCH---
WP_008086377.1 6491 6050 - 146NO PFAM MATCH---
WP_008086379.1 8948 6743 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.70E-73
1.80E-70
1.00E-07
WP_008086381.1 9168 11793 + 874PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
2.60E-71
1.30E-48
5.40E-15
4.40E-08
2.70E-06
WP_008086384.1 12028 12505 + 158PF01814HemerythrinHemerythrin HHE cation binding domain1.00E-17
WP_008086386.1 12764 12563 - 66NO PFAM MATCH---
WP_008086388.1 14386 12865 - 506PF13454NAD_binding_9FAD-NAD(P)-binding1.20E-26
WP_008086390.1 15637 14449 - 395PF00155
PF01053
PF01212
PF01041
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotransferase class I and II
Cys/Met metabolism PLP-dependent enzyme
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
9.70E-64
1.70E-04
9.50E-04
9.90E-04
WP_008086392.1 16539 15660 - 292PF09290
PF01118
PF01488
PF03447
PF01408
AcetDehyd-dimer
Semialdhyde_dh
Shikimate_DH
NAD_binding_3
GFO_IDH_MocA
Prokaryotic acetaldehyde dehydrogenase, dimerisation
Semialdehyde dehydrogenase, NAD binding domain
Shikimate / quinate 5-dehydrogenase
Homoserine dehydrogenase, NAD binding domain
Oxidoreductase family, NAD-binding Rossmann fold
1.50E-41
2.20E-08
5.00E-06
1.90E-04
8.40E-04
WP_008086394.1 17564 16553 - 336PF00682
PF07836
HMGL-like
DmpG_comm
HMGL-like
DmpG-like communication domain
1.20E-40
1.30E-19
WP_008086397.1 18636 17601 - 344PF05145AbrBTransition state regulatory protein AbrB5.10E-58

Results for WP_007951392.1 [Pseudomonas sp. GM25] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007951384.1 131800 132094 + 97NO PFAM MATCH---
WP_007951385.1 132096 132417 + 106NO PFAM MATCH---
WP_007951386.1 132364 132880 + 171PF06172Cupin_5Cupin superfamily (DUF985)8.60E-45
WP_045121645.1 133693 133081 - 203PF02223
PF13604
PF13555
Thymidylate_kin
AAA_30
AAA_29
Thymidylate kinase
AAA domain
P-loop containing region of AAA domain
9.30E-07
2.90E-04
4.70E-04
WP_007951388.1 133841 134975 + 377PF00266Aminotran_5Aminotransferase class-V7.60E-11
WP_007951389.1 135245 137651 + 801PF01011
PF13360
PQQ
PQQ_2
PQQ enzyme repeat
PQQ-like domain
3.20E-42
3.30E-15
WP_052026219.1 137777 139031 + 417PF04966OprBCarbohydrate-selective porin, OprB family6.00E-83
WP_007951391.1 139562 142349 + 928PF00563
PF00990
PF02203
PF13426
PF08448
EAL
GGDEF
TarH
PAS_9
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
Tar ligand binding domain homologue
PAS domain
PAS fold
1.30E-69
2.40E-49
1.40E-18
2.30E-17
4.50E-12
WP_007951392.1 144605 142409 - 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.50E-73
9.30E-71
2.90E-09
WP_007951393.1 144892 146080 + 395NO PFAM MATCH---
WP_007951394.1 146220 147516 + 431PF03573OprDouter membrane porin, OprD family1.50E-137
WP_007951395.1 149536 147625 - 636PF00009
PF09107
PF09106
PF03144
PF01926
GTP_EFTU
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
MMR_HSR1
Elongation factor Tu GTP binding domain
Elongation factor SelB, winged helix
Elongation factor SelB, winged helix
Elongation factor Tu domain 2
50S ribosome-binding GTPase
5.90E-33
3.80E-18
6.40E-13
1.10E-05
1.30E-04
WP_007951396.1 150939 149532 - 468PF03841
PF12390
PF00266
PF01041
SelA
Se-cys_synth_N
Aminotran_5
DegT_DnrJ_EryC1
L-seryl-tRNA selenium transferase
Selenocysteine synthase N terminal
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
3.10E-166
3.10E-08
4.00E-04
7.00E-04
WP_007951397.1 151671 150990 - 226PF11769DUF3313Protein of unknown function (DUF3313)2.10E-46
WP_007951398.1 152000 151688 - 103NO PFAM MATCH---
WP_045121653.1 152151 152877 + 241PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
6.30E-28
3.40E-22
WP_007951400.1 152873 154205 + 443PF02518
PF00672
PF00512
HATPase_c
HAMP
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
His Kinase A (phospho-acceptor) domain
5.40E-19
6.10E-09
1.60E-05

Results for WP_007717953.1 [Brevibacillus sp. BC25] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007717933.1 3264 4209 + 314PF13280
PF08279
PF08220
PF19187
PF02082
WYL
HTH_11
HTH_DeoR
HTH_PafC
Rrf2
WYL domain
HTH domain
DeoR-like helix-turn-helix domain
PafC helix-turn-helix domain
Iron-dependent Transcriptional regulator
8.50E-24
7.60E-13
2.40E-09
7.30E-09
7.70E-04
WP_007717936.1 4219 4555 + 111NO PFAM MATCH---
WP_007717939.1 4579 4954 + 124NO PFAM MATCH---
WP_007717942.1 4977 6174 + 398PF07690MFS_1Major Facilitator Superfamily1.90E-27
WP_007717946.1 6787 6187 - 199PF00440
PF13977
TetR_N
TetR_C_6
Bacterial regulatory proteins, tetR family
BetI-type transcriptional repressor, C-terminal
3.80E-17
3.00E-05
WP_007717948.1 6967 7891 + 307PF01040UbiAUbiA prenyltransferase family2.60E-59
WP_238543250.1 8187 8439 + 83NO PFAM MATCH---
WP_007717950.1 8498 10400 + 633NO PFAM MATCH---
WP_007717953.1 10396 12337 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-84
WP_007717956.1 12359 13967 + 535PF00881NitroreductaseNitroreductase family1.10E-13
WP_007717959.1 15753 14007 - 581PF00266
PF13302
PF01053
PF00583
PF01041
Aminotran_5
Acetyltransf_3
Cys_Met_Meta_PP
Acetyltransf_1
DegT_DnrJ_EryC1
Aminotransferase class-V
Acetyltransferase (GNAT) domain
Cys/Met metabolism PLP-dependent enzyme
Acetyltransferase (GNAT) family
DegT/DnrJ/EryC1/StrS aminotransferase family
4.00E-62
4.30E-16
7.20E-09
2.40E-08
2.40E-06
WP_007717962.1 16032 16539 + 168PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
1.80E-16
5.50E-04
WP_007717967.1 17448 16620 - 275NO PFAM MATCH---
WP_007717970.1 17704 18316 + 203PF09335SNARE_assocSNARE associated Golgi protein2.20E-23
WP_193375246.1 18499 19984 + 494PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
6.40E-31
4.70E-17
WP_007717977.1 20165 21008 + 280PF00005
PF13304
PF02463
PF13401
PF03193
ABC_tran
AAA_21
SMC_N
AAA_22
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
RsgA GTPase
5.50E-35
1.90E-06
1.10E-05
1.10E-04
8.10E-04
WP_039960273.1 20940 21696 + 251PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.60E-23

Results for WP_007946861.1 [Pseudomonas sp. GM21] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003409202.1 13 535 + 174INFERRED GENE---
WP_007946861.1 3284 1079 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.10E-72
4.90E-72
1.30E-07
WP_007946862.1 4550 3392 - 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp1.10E-137
WP_007946863.1 5273 4562 - 236PF06693DUF1190Protein of unknown function (DUF1190)1.10E-31
WP_007946864.1 5721 5292 - 142PF03994DUF350Domain of Unknown Function (DUF350)8.00E-22
WP_007946866.1 6416 5735 - 226PF10679DUF2491Protein of unknown function (DUF2491)1.60E-42
WP_007946867.1 7437 6402 - 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
3.40E-10
1.30E-05
WP_007946868.1 8075 7511 - 187PF01694RhomboidRhomboid family3.30E-18
WP_007946869.1 9053 8354 - 232PF04012PspA_IM30PspA/IM30 family2.20E-41
WP_150782856.1 9656 9074 - 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)3.90E-44

Results for WP_008093809.1 [Pseudomonas sp. GM84] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008093800.1 59577 59898 + 106NO PFAM MATCH---
WP_043273411.1 60119 60716 + 198PF04403PqiAParaquat-inducible protein A4.00E-38
WP_008093803.1 60712 61357 + 214PF04403PqiAParaquat-inducible protein A4.20E-53
WP_008093804.1 61340 62981 + 546PF02470
PF04108
MlaD
ATG17_like
MlaD protein
Autophagy protein ATG17-like domain
2.70E-37
6.30E-04
WP_008093805.1 63007 63550 + 180PF03886ABC_trans_auxABC-type transport auxiliary lipoprotein component5.90E-25
WP_008093806.1 64915 63568 - 448PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
8.70E-25
7.20E-23
8.00E-04
WP_008093807.1 67177 64933 - 747PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
6.10E-33
1.60E-30
WP_008093808.1 67632 67176 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-21
9.70E-08
4.90E-05
WP_008093809.1 68038 70225 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.70E-73
5.80E-71
4.00E-08
WP_008093810.1 70441 71254 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
4.20E-23
2.70E-22
1.30E-16
4.10E-14
4.70E-09
WP_008093811.1 71311 71845 + 177NO PFAM MATCH---
WP_008093812.1 72183 71883 - 99PF13827DUF4189Domain of unknown function (DUF4189)3.40E-04
WP_008093813.1 74519 72398 - 706PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.90E-54
3.80E-23
WP_008093814.1 74738 75317 + 192NO PFAM MATCH---
WP_008093815.1 75449 75968 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ4.20E-41
WP_008093817.1 76877 75968 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.30E-24
1.50E-13

Results for WP_008102403.1 [Enterobacteriaceae bacterium RIT697] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008102419.1 406291 409678 + 1128PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.90E-74
5.30E-44
1.00E-28
9.40E-28
1.10E-05
WP_008102417.1 409853 410465 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.10E-55
1.70E-04
WP_154181530.1 410532 411819 + 428PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
4.50E-63
1.90E-24
7.30E-17
3.20E-14
3.30E-07
WP_008102413.1 411918 413211 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.30E-37
1.00E-33
WP_008102411.1 413525 414677 + 383PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.30E-30
2.50E-08
2.10E-05
WP_008102409.1 415473 414732 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.10E-31
1.70E-17
4.60E-05
WP_008102407.1 417920 415637 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.60E-205
7.20E-44
WP_154153045.1 418808 417989 - 272PF01226Form_Nir_transFormate/nitrite transporter5.10E-73
WP_008102403.1 420970 419206 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-82
3.00E-67
WP_008102401.1 421280 422366 + 361PF00266Aminotran_5Aminotransferase class-V1.30E-64
WP_008102399.1 422447 423734 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-148
WP_036647904.1 423932 424613 + 226PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
1.30E-82
6.00E-08
5.10E-04
6.60E-04
7.80E-04
WP_052025984.1 424734 426411 + 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.80E-99
3.20E-13
1.80E-07
WP_003849360.1 426497 426782 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_008102392.1 426988 429247 + 752PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-50
1.10E-14
9.30E-08
WP_154181453.1 429281 431030 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
7.60E-59
5.30E-35
1.40E-10
2.20E-06
7.90E-04
WP_008102388.1 431026 432028 + 333PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.90E-119

Results for WP_007896799.1 [Pseudomonas sp. GM102] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003176404.1 32308 32929 + 206PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
3.70E-31
6.80E-18
WP_003186012.1 32951 33953 + 333PF01000
PF03118
PF01193
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA polymerase Rpb3/RpoA insert domain
Bacterial RNA polymerase, alpha chain C terminal domain
RNA polymerase Rpb3/Rpb11 dimerisation domain
2.60E-26
4.50E-24
1.90E-22
WP_007896790.1 33995 34382 + 128PF01196Ribosomal_L17Ribosomal protein L177.40E-34
WP_007896794.1 34621 36070 + 482PF00199
PF06628
Catalase
Catalase-rel
Catalase
Catalase-related immune-responsive
3.50E-194
6.90E-22
WP_007896795.1 36225 36690 + 154PF00210FerritinFerritin-like domain4.60E-35
WP_007896796.1 39588 36753 - 944PF17760
PF17755
PF00005
PF02463
PF13191
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
UvrA interaction domain
UvrA DNA-binding domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
6.50E-39
1.00E-34
9.20E-21
2.30E-10
1.30E-07
WP_007896797.1 39779 41177 + 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
9.60E-51
4.40E-08
6.40E-05
WP_007896798.1 41186 41711 + 174PF00436SSBSingle-strand binding protein family6.90E-38
WP_007896799.1 43987 41782 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.60E-72
5.50E-72
1.80E-07
WP_007896801.1 45250 44092 - 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp4.20E-138
WP_007896804.1 45988 45262 - 241PF06693DUF1190Protein of unknown function (DUF1190)1.70E-30
WP_007896806.1 46436 46007 - 142PF03994DUF350Domain of Unknown Function (DUF350)1.60E-21
WP_007896809.1 47125 46450 - 224PF10679DUF2491Protein of unknown function (DUF2491)1.10E-42
WP_007896812.1 48146 47111 - 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
8.00E-10
5.30E-04
WP_007896815.1 48782 48218 - 187PF01694RhomboidRhomboid family7.70E-21
WP_007896817.1 49721 49022 - 232PF04012PspA_IM30PspA/IM30 family2.10E-42
WP_085985572.1 50327 49745 - 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)1.20E-43

Results for WP_007946405.1 [Pseudomonas sp. GM21] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007946392.1 9531 9186 - 114NO PFAM MATCH---
WP_007946393.1 11232 9777 - 484PF00270
PF13384
DEAD
HTH_23
DEAD/DEAH box helicase
Homeodomain-like domain
1.10E-06
8.80E-04
WP_007946395.1 11869 11584 - 94NO PFAM MATCH---
WP_007946397.1 12303 11865 - 145NO PFAM MATCH---
WP_007946398.1 14041 13084 - 318PF00589
PF12835
Phage_integrase
Integrase_1
Phage integrase family
Integrase
1.70E-21
5.10E-04
WP_007946401.1 15073 15454 + 126PF19619DUF6124Family of unknown function (DUF6124)4.10E-11
WP_007946402.1 16547 15671 - 291PF00561
PF12146
PF12697
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
3.90E-19
1.70E-09
4.10E-08
WP_007946404.1 17506 16543 - 320PF13649
PF08241
PF13847
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.40E-12
1.30E-07
3.10E-07
1.70E-04
WP_007946405.1 18735 17502 - 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-30
WP_007946408.1 19638 19323 - 104PF15731
PF12844
MqsA_antitoxin
HTH_19
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Helix-turn-helix domain
4.10E-04
6.90E-04
WP_007964869.1 19627 19978 + 117INFERRED GENE---
WP_007946411.1 20723 20345 - 125PF01850
PF13470
PIN
PIN_3
PIN domain
PIN domain
4.80E-16
4.00E-04
WP_162830877.1 21154 20719 - 144PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system7.90E-13
WP_007946413.1 22822 21358 - 487PF00361Proton_antipo_MProton-conducting membrane transporter5.20E-79
WP_007946414.1 24362 22829 - 510PF00361Proton_antipo_MProton-conducting membrane transporter3.30E-70
WP_007946415.1 26256 24402 - 617PF00361
PF00662
Proton_antipo_M
Proton_antipo_N
Proton-conducting membrane transporter
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
4.00E-88
1.10E-18
WP_007946416.1 26561 26252 - 102PF00420Oxidored_q2NADH-ubiquinone/plastoquinone oxidoreductase chain 4L1.80E-21

Results for WP_009367430.1 [Halogranum salarium B-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049893834.1 85986 85092 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.60E-66
1.10E-37
WP_009367422.1 86251 86074 - 58NO PFAM MATCH---
WP_009367423.1 86451 86796 + 114NO PFAM MATCH---
WP_009367424.1 88096 86848 - 415PF00464
PF00155
PF01212
PF01041
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
1.60E-151
2.00E-11
3.60E-06
5.80E-04
WP_009367425.1 88199 90239 + 679NO PFAM MATCH---
WP_157572878.1 90465 90255 - 69NO PFAM MATCH---
WP_009367427.1 90646 91465 + 272PF19138DUF5821Family of unknown function (DUF5821)4.80E-98
WP_009367428.1 91652 94052 + 799PF00932
PF00565
PF14258
PF09822
LTD
SNase
DUF4350
ABC_transp_aux
Lamin Tail Domain
Staphylococcal nuclease homologue
Domain of unknown function (DUF4350)
ABC-type uncharacterized transport system
3.90E-26
1.00E-18
3.40E-11
1.50E-07
WP_009367430.1 94308 96033 + 574PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-53
WP_009367432.1 96413 96029 - 127NO PFAM MATCH---
WP_009367433.1 97630 96493 - 378PF01889DUF63Membrane protein of unknown function DUF631.20E-40
WP_009367434.1 98205 97755 - 149PF01037
PF13404
PF13412
PF12840
PF12802
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_20
MarR_2
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Helix-turn-helix domain
MarR family
1.20E-17
2.60E-17
3.40E-17
5.80E-08
1.80E-06
WP_009367436.1 99254 98450 - 267PF00459Inositol_PInositol monophosphatase family4.90E-48
WP_009367437.1 99767 100040 + 90NO PFAM MATCH---
WP_009367438.1 100586 101078 + 163PF03745DUF309Domain of unknown function (DUF309)5.80E-16
WP_049893837.1 101162 101966 + 267PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family6.20E-14
WP_009367440.1 102419 101969 - 149PF03684UPF0179Uncharacterised protein family (UPF0179)1.40E-47

Results for WP_007980888.1 [Pseudomonas sp. GM33] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007980872.1 9687 11142 + 484PF01235Na_Ala_sympSodium:alanine symporter family4.20E-149
WP_238540856.1 12529 11203 - 441PF00083
PF07690
PF12832
Sugar_tr
MFS_1
MFS_1_like
Sugar (and other) transporter
Major Facilitator Superfamily
MFS_1 like family
5.10E-31
4.00E-29
1.20E-05
WP_007980876.1 13066 14008 + 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.20E-38
7.50E-21
WP_007980878.1 14164 15289 + 374PF07690MFS_1Major Facilitator Superfamily3.80E-16
WP_007980880.1 15393 15915 + 173PF11454DUF3016Protein of unknown function (DUF3016)7.50E-39
WP_007980882.1 16265 16454 + 62NO PFAM MATCH---
WP_007980884.1 17914 16522 - 463PF00171AldedhAldehyde dehydrogenase family4.00E-137
WP_007980886.1 18014 18893 + 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.80E-40
7.30E-18
WP_007980888.1 18970 21175 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.20E-72
8.80E-71
4.10E-08

Results for WP_007933688.1 [Pseudomonas sp. GM18] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007933673.1 68591 69173 + 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)7.50E-45
WP_007933675.1 69197 69896 + 232PF04012PspA_IM30PspA/IM30 family4.50E-43
WP_007933676.1 70008 70572 + 187PF01694RhomboidRhomboid family6.30E-20
WP_007933678.1 70643 71678 + 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
2.10E-10
1.10E-04
WP_007933680.1 71664 72345 + 226PF10679DUF2491Protein of unknown function (DUF2491)3.90E-42
WP_007933682.1 72359 72788 + 142PF03994DUF350Domain of Unknown Function (DUF350)3.00E-21
WP_007933683.1 72807 73533 + 241PF06693DUF1190Protein of unknown function (DUF1190)1.00E-29
WP_007933685.1 73545 74703 + 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp1.70E-138
WP_007933688.1 74823 77028 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.80E-74
4.70E-72
5.90E-08
WP_007933689.1 77616 77094 - 173PF00436SSBSingle-strand binding protein family6.80E-38
WP_007933690.1 79023 77625 - 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
2.30E-49
1.50E-07
2.30E-05
WP_007933691.1 79203 82038 + 944PF17760
PF17755
PF00005
PF02463
PF13191
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
UvrA interaction domain
UvrA DNA-binding domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.20E-39
3.90E-35
9.30E-21
1.50E-10
1.40E-07
WP_007933692.1 82563 82098 - 154PF00210FerritinFerritin-like domain7.00E-34
WP_007933693.1 84167 82712 - 484PF00199
PF06628
Catalase
Catalase-rel
Catalase
Catalase-related immune-responsive
2.70E-195
5.40E-22
WP_007924175.1 84792 84405 - 128PF01196Ribosomal_L17Ribosomal protein L177.70E-34
WP_003186012.1 85836 84834 - 333PF01000
PF03118
PF01193
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA polymerase Rpb3/RpoA insert domain
Bacterial RNA polymerase, alpha chain C terminal domain
RNA polymerase Rpb3/Rpb11 dimerisation domain
2.60E-26
4.50E-24
1.90E-22
WP_003176404.1 86479 85858 - 206PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
3.70E-31
6.80E-18

Results for WP_007992604.1 [Pseudomonas sp. GM48] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007992595.1 103990 104908 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.20E-18
1.00E-14
WP_007992597.1 105100 105643 + 180PF05163
PF12867
PF04978
DinB
DinB_2
DUF664
DinB family
DinB superfamily
Protein of unknown function (DUF664)
4.20E-27
2.10E-10
4.90E-04
WP_238540726.1 106312 106039 - 90PF13356Arm-DNA-bind_3Arm DNA-binding domain3.60E-07
WP_005779795.1 106291 106405 + 38INFERRED GENE---
WP_033063623.1 106505 106787 + 93PF05901ExcaliburExcalibur calcium-binding domain1.70E-10
WP_033063624.1 106913 107126 + 70NO PFAM MATCH---
WP_007992600.1 108543 107151 - 463PF00171AldedhAldehyde dehydrogenase family1.90E-138
WP_007992603.1 108643 109522 + 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-40
5.60E-17
WP_007992604.1 109599 111804 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.90E-71
6.00E-71
3.30E-08

Results for WP_003781776.1 [Actinomyces naeslundii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003784911.1 1518067 1519768 + 566PF13749
PF04326
PF12802
PF12840
PF17782
HATPase_c_4
AlbA_2
MarR_2
HTH_20
DprA_WH
Putative ATP-dependent DNA helicase recG C-terminal
Putative DNA-binding domain
MarR family
Helix-turn-helix domain
DprA winged helix domain
3.40E-16
3.70E-11
6.10E-07
3.50E-06
6.20E-05
WP_003784904.1 1521490 1520344 - 381PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term7.10E-22
WP_232621539.1 1524123 1521486 - 878NO PFAM MATCH---
WP_076075259.1 1525301 1524119 - 393PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)1.20E-05
WP_128831176.1 1525612 1525435 - 58NO PFAM MATCH---
WP_003780689.1 1526545 1525807 - 245NO PFAM MATCH---
WP_076142652.1 1528331 1526534 - 598NO PFAM MATCH---
WP_076142653.1 1529067 1528332 - 244NO PFAM MATCH---
WP_003781776.1 1530507 1529133 - 457PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-61
WP_003781770.1 1530774 1531524 + 249PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.30E-23
1.30E-14
3.10E-04
WP_143229058.1 1532526 1531563 - 320NO PFAM MATCH---
WP_003781773.1 1532693 1532975 + 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor2.40E-32
WP_003781780.1 1533061 1533331 + 89PF00403HMAHeavy-metal-associated domain7.50E-13
WP_003781775.1 1533400 1536040 + 879PF00122
PF00702
PF00403
PF08282
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
2.00E-51
2.30E-42
1.90E-12
9.90E-05
WP_076142654.1 1536423 1537809 + 461PF00155Aminotran_1_2Aminotransferase class I and II2.10E-41
WP_003781734.1 1537949 1539158 + 402PF01053
PF03841
Cys_Met_Meta_PP
SelA
Cys/Met metabolism PLP-dependent enzyme
L-seryl-tRNA selenium transferase
6.60E-119
1.30E-04
WP_003781736.1 1539272 1541042 + 589PF00561
PF08386
Abhydrolase_1
Abhydrolase_4
alpha/beta hydrolase fold
TAP-like protein
5.90E-27
1.10E-18

Results for WP_007951478.1 [Pseudomonas sp. GM25] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007951469.1 32719 34045 + 441PF03573OprDouter membrane porin, OprD family2.20E-153
WP_007951470.1 34527 34194 - 110PF10976DUF2790Protein of unknown function (DUF2790)1.40E-26
WP_045121658.1 34807 34606 - 66NO PFAM MATCH---
WP_007951472.1 38094 34941 - 1050PF00873ACR_tranAcrB/AcrD/AcrF family0.00E+00
WP_007951473.1 39303 38109 - 397PF16576
PF13437
PF13533
PF00364
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
9.00E-43
2.90E-23
2.00E-07
9.80E-04
WP_007951474.1 40600 39352 - 415PF02321OEPOuter membrane efflux protein8.60E-53
WP_007951475.1 41008 41683 + 224PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.00E-28
7.70E-27
WP_007951476.1 41679 43089 + 469PF02518
PF00512
PF00672
PF14501
HATPase_c
HisKA
HAMP
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
GHKL domain
1.40E-21
2.80E-11
8.90E-10
5.10E-05
WP_007951478.1 43640 44864 + 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-29
WP_007951480.1 44860 45811 + 316PF13649
PF13847
PF08241
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.60E-10
2.80E-07
2.20E-06
8.60E-05
WP_007951481.1 45807 46686 + 292PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.20E-19
2.50E-09
3.70E-07
WP_162831783.1 46844 47276 + 143PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system1.30E-11
WP_007951483.1 47272 47650 + 125PF01850PINPIN domain1.50E-16
WP_007951484.1 49449 47706 - 580NO PFAM MATCH---
WP_039767461.1 49769 49496 - 90PF09928DUF2160Predicted small integral membrane protein (DUF2160)6.10E-37
WP_007951486.1 50580 49779 - 266PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.20E-09
WP_007951487.1 51456 50589 - 288PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.80E-14

Results for WP_007913075.1 [Pseudomonas sp. GM16] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007913059.1 20097 20604 + 168PF01625PMSRPeptide methionine sulfoxide reductase2.40E-56
WP_007913062.1 21244 20566 - 225PF17923
PF00440
PF17918
TetR_C_18
TetR_N
TetR_C_15
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.60E-35
6.40E-15
4.20E-05
WP_007913063.1 21355 22012 + 218PF13578
PF01596
PF13847
Methyltransf_24
Methyltransf_3
Methyltransf_31
Methyltransferase domain
O-methyltransferase
Methyltransferase domain
4.40E-14
2.70E-13
2.20E-04
WP_007913065.1 22329 22554 + 74PF00669Flagellin_NBacterial flagellin N-terminal helical region5.90E-04
WP_007913067.1 24970 22843 - 708PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.40E-27
2.10E-10
WP_007913069.1 25160 25976 + 271PF03976PPK2Polyphosphate kinase 2 (PPK2)2.20E-92
WP_007913071.1 26240 26456 + 71NO PFAM MATCH---
WP_007913073.1 29074 26461 - 870PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
1.40E-70
1.40E-48
2.60E-14
1.90E-08
2.10E-07
WP_007913075.1 29295 31500 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.30E-73
6.80E-71
2.40E-07
WP_007913077.1 31655 32102 + 148NO PFAM MATCH---
WP_007913079.1 32593 32098 - 164NO PFAM MATCH---
WP_007913080.1 33759 32601 - 385PF00990GGDEFDiguanylate cyclase, GGDEF domain1.30E-39
WP_007913081.1 34155 33906 - 82NO PFAM MATCH---
WP_007913082.1 34326 34971 + 214NO PFAM MATCH---
WP_007913083.1 35057 35399 + 113NO PFAM MATCH---
WP_007913084.1 36146 36788 + 213PF01810LysELysE type translocator2.90E-32
WP_007913086.1 37978 36784 - 397PF02518
PF00512
PF01590
PF13185
HATPase_c
HisKA
GAF
GAF_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
GAF domain
2.70E-17
5.40E-13
9.80E-08
2.30E-04

Results for WP_008047597.1 [Pseudomonas sp. GM74] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008047597.1 2450 245 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.60E-72
6.40E-71
1.90E-08
WP_008047600.1 3406 2527 - 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.00E-40
5.70E-17
WP_008047602.1 3506 4898 + 463PF00171AldedhAldehyde dehydrogenase family4.00E-138
WP_008047604.1 5530 5737 + 68NO PFAM MATCH---
WP_008047606.1 6095 5723 - 123NO PFAM MATCH---
WP_008047607.1 6151 6493 + 113NO PFAM MATCH---
WP_238538769.1 6665 6560 - 34PF05901ExcaliburExcalibur calcium-binding domain1.20E-06
WP_008047613.1 7338 7971 + 210PF03567Sulfotransfer_2Sulfotransferase family2.00E-16
WP_008047615.1 8217 8034 - 60NO PFAM MATCH---

Results for WP_008008907.1 [Pseudomonas sp. GM50] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003176404.1 32309 32930 + 206PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
3.70E-31
6.80E-18
WP_003186012.1 32952 33954 + 333PF01000
PF03118
PF01193
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA polymerase Rpb3/RpoA insert domain
Bacterial RNA polymerase, alpha chain C terminal domain
RNA polymerase Rpb3/Rpb11 dimerisation domain
2.60E-26
4.50E-24
1.90E-22
WP_007896790.1 33996 34383 + 128PF01196Ribosomal_L17Ribosomal protein L177.40E-34
WP_008008901.1 34623 36072 + 482PF00199
PF06628
Catalase
Catalase-rel
Catalase
Catalase-related immune-responsive
6.60E-195
7.00E-22
WP_007943775.1 36227 36692 + 154PF00210FerritinFerritin-like domain3.70E-35
WP_008008903.1 39590 36755 - 944PF17760
PF17755
PF00005
PF02463
PF13191
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
UvrA interaction domain
UvrA DNA-binding domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
6.50E-39
9.90E-35
9.20E-21
2.30E-10
1.30E-07
WP_008008905.1 39781 41179 + 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
7.20E-49
4.70E-09
6.30E-05
WP_007896798.1 41188 41713 + 174PF00436SSBSingle-strand binding protein family6.90E-38
WP_008008907.1 43989 41784 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.10E-73
1.30E-72
1.80E-07
WP_008008909.1 45252 44094 - 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp7.30E-138
WP_008008911.1 45993 45264 - 242PF06693DUF1190Protein of unknown function (DUF1190)2.20E-29
WP_008008913.1 46441 46012 - 142PF03994DUF350Domain of Unknown Function (DUF350)2.70E-21
WP_008008915.1 47130 46455 - 224PF10679DUF2491Protein of unknown function (DUF2491)1.90E-42
WP_008008917.1 48151 47116 - 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
2.40E-09
2.70E-04
WP_008008919.1 48787 48223 - 187PF01694RhomboidRhomboid family1.10E-20
WP_007896817.1 49642 48943 - 232PF04012PspA_IM30PspA/IM30 family2.10E-42
WP_008008922.1 50248 49666 - 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)1.40E-44

Results for WP_000192992.1 back to top

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Couldn't process WP_000192992.1 Genbank filestream. May be corrupt.

Results for WP_008125893.1 [Phyllobacterium sp. YR531] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008125872.1 58456 57433 - 340PF01370
PF01073
PF13460
PF16363
PF07993
Epimerase
3Beta_HSD
NAD_binding_10
GDP_Man_Dehyd
NAD_binding_4
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
NAD(P)H-binding
GDP-mannose 4,6 dehydratase
Male sterility protein
3.20E-18
7.60E-17
1.20E-11
1.00E-06
2.80E-06
WP_008125875.1 59102 58484 - 205PF13649
PF00398
Methyltransf_25
RrnaAD
Methyltransferase domain
Ribosomal RNA adenine dimethylase
9.70E-05
8.70E-04
WP_008125878.1 59207 59807 + 199PF00440
PF17920
TetR_N
TetR_C_16
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
3.20E-15
4.40E-12
WP_244423942.1 59966 61211 + 414PF03583
PF00326
PF12146
PF20434
LIP
Peptidase_S9
Hydrolase_4
BD-FAE
Secretory lipase
Prolyl oligopeptidase family
Serine aminopeptidase, S33
BD-FAE
5.20E-27
1.10E-08
4.70E-07
6.80E-04
WP_008125881.1 61402 62542 + 379PF01757Acyl_transf_3Acyltransferase family7.20E-25
WP_157179396.1 62633 62861 + 75NO PFAM MATCH---
WP_008125886.1 63233 65255 + 673PF03704
PF07719
PF14559
PF13432
PF13428
BTAD
TPR_2
TPR_19
TPR_16
TPR_14
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.90E-12
7.40E-09
4.20E-06
2.70E-05
6.20E-05
WP_008125888.1 65285 65549 + 87NO PFAM MATCH---
WP_008125893.1 66064 67321 + 418PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-57
WP_008125894.1 67330 68068 + 245PF07812TfuATfuA-like protein3.00E-41
WP_008125895.1 68425 69646 + 406PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
3.40E-22
1.70E-16
8.90E-09
WP_008125896.1 69659 70946 + 428PF13692
PF00534
Glyco_trans_1_4
Glycos_transf_1
Glycosyl transferases group 1
Glycosyl transferases group 1
1.10E-16
1.30E-16
WP_157179397.1 72267 71589 - 225PF02397Bac_transfBacterial sugar transferase1.80E-63
WP_008125898.1 74221 72655 - 521NO PFAM MATCH---
WP_210160786.1 74567 75998 + 476PF13440
PF01943
PF14667
Polysacc_synt_3
Polysacc_synt
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
6.00E-36
1.30E-13
2.20E-08
WP_008125900.1 76035 76710 + 224PF05175
PF13847
PF09445
PF13649
PF06325
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_25
PrmA
Methyltransferase small domain
Methyltransferase domain
RNA cap guanine-N2 methyltransferase
Methyltransferase domain
Ribosomal protein L11 methyltransferase (PrmA)
8.30E-14
8.70E-13
6.10E-09
4.00E-08
8.20E-08
WP_008125901.1 76727 77828 + 366NO PFAM MATCH---

Results for WP_008137277.1 [Bradyrhizobium sp. YR681] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008137261.1 8029 11176 + 1048PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
2.40E-15
5.20E-05
WP_035966146.1 11240 11807 + 188PF06776IalBInvasion associated locus B (IalB) protein6.10E-33
WP_008137263.1 14138 11849 - 762PF00884
PF01663
Sulfatase
Phosphodiest
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
2.80E-78
9.70E-04
WP_008137264.1 14248 14905 + 218PF00440TetR_NBacterial regulatory proteins, tetR family1.50E-06
WP_008137267.1 15592 15271 - 106NO PFAM MATCH---
WP_157195782.1 15707 17660 + 650PF03098An_peroxidaseAnimal haem peroxidase7.10E-08
WP_008137272.1 17701 18094 + 130NO PFAM MATCH---
WP_035966150.1 20041 18106 - 644PF03704BTADBacterial transcriptional activator domain5.10E-08
WP_008137277.1 21595 20251 - 447PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-52
WP_008137280.1 21756 22269 + 170NO PFAM MATCH---
WP_008137281.1 23320 22348 - 323PF03401TctCTripartite tricarboxylate transporter family receptor5.50E-81
WP_240535266.1 24507 23376 - 376PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.00E-97
4.60E-11
WP_008137285.1 25558 24520 - 345PF04166PdxAPyridoxal phosphate biosynthetic protein PdxA2.40E-100
WP_008137286.1 26661 25554 - 368PF07005
PF17042
SBD_N
NBD_C
Sugar-binding N-terminal domain
Nucleotide-binding C-terminal domain
3.80E-18
2.50E-14
WP_008137288.1 28103 26663 - 479PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
1.60E-47
3.30E-34
WP_008137290.1 29050 28129 - 306PF00701DHDPSDihydrodipicolinate synthetase family8.50E-45
WP_008137292.1 29155 30007 + 283PF01614
PF09339
PF12802
IclR
HTH_IclR
MarR_2
Bacterial transcriptional regulator
IclR helix-turn-helix domain
MarR family
5.00E-26
8.80E-16
5.70E-05

Results for WP_000512735.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_078404255.1 153694 153493 - 66NO PFAM MATCH---
WP_162281172.1 154372 153727 - 214PF00565SNaseStaphylococcal nuclease homologue2.20E-25
WP_162281173.1 157464 154800 - 887PF01131
PF13342
PF01751
Topoisom_bac
Toprim_Crpt
Toprim
DNA topoisomerase
C-terminal repeat of topoisomerase
Toprim domain
2.00E-80
1.00E-49
1.10E-12
WP_006097157.1 157639 157729 + 30INFERRED GENE---
WP_000464479.1 158269 157810 - 152NO PFAM MATCH---
WP_000716183.1 159390 158373 - 338PF16169
PF14399
PF13529
DUF4872
BtrH_N
Peptidase_C39_2
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
Peptidase_C39 like family
2.60E-26
1.60E-17
8.50E-04
WP_014893142.1 161030 159386 - 547PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
5.90E-22
3.80E-19
7.00E-05
4.60E-04
WP_162281175.1 161847 161019 - 275PF00881NitroreductaseNitroreductase family7.80E-12
WP_000512735.1 163166 161876 - 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-55
WP_162281176.1 164139 163179 - 319NO PFAM MATCH---
WP_000435813.1 164445 164277 - 55NO PFAM MATCH---
WP_162281177.1 166246 165607 - 212PF08378NERDNuclease-related domain1.50E-28
WP_002163370.1 166646 166262 - 127PF13571DUF4133Domain of unknown function (DUF4133)4.00E-04
WP_162281178.1 166771 167356 + 194NO PFAM MATCH---
WP_000377937.1 167339 167954 + 204NO PFAM MATCH---
WP_118414163.1 168640 168004 - 211NO PFAM MATCH---
WP_162281179.1 169269 168639 - 209NO PFAM MATCH---

Results for WP_007630842.1 [Rhizobium sp. CCGE 510] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007630828.1 199551 198648 - 300PF04230PS_pyruv_transPolysaccharide pyruvyl transferase8.40E-08
WP_007630830.1 200051 199547 - 167PF14602
PF00132
Hexapep_2
Hexapep
Hexapeptide repeat of succinyl-transferase
Bacterial transferase hexapeptide (six repeats)
8.00E-15
1.50E-11
WP_007630832.1 201202 200050 - 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
2.00E-29
1.40E-24
2.90E-12
1.00E-08
3.60E-06
WP_007630834.1 202307 201233 - 357PF00331Glyco_hydro_10Glycosyl hydrolase family 103.70E-66
WP_007630835.1 202501 202876 + 124NO PFAM MATCH---
WP_007630837.1 203789 202901 - 295PF19495DUF6030Family of unknown function (DUF6030)1.80E-63
WP_007630838.1 204302 204935 + 210PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.50E-21
6.40E-16
1.70E-13
1.20E-11
1.10E-10
WP_007630841.1 205177 205603 + 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.50E-12
1.10E-07
6.60E-07
1.70E-04
WP_007630842.1 206111 207320 + 402PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-59
WP_007630843.1 207316 208024 + 235PF07812TfuATfuA-like protein6.10E-42
WP_007630844.1 208125 208374 + 82NO PFAM MATCH---
WP_007630845.1 208946 208739 - 68NO PFAM MATCH---
WP_157179908.1 210213 209967 - 81NO PFAM MATCH---
WP_007630846.1 211338 210348 - 329PF13407Peripla_BP_4Periplasmic binding protein domain7.30E-45
WP_007630847.1 212367 211386 - 326PF01370
PF16363
PF01073
PF13460
PF02719
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
Polysacc_synt_2
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
3-beta hydroxysteroid dehydrogenase/isomerase family
NAD(P)H-binding
Polysaccharide biosynthesis protein
9.10E-21
1.90E-16
2.20E-10
7.50E-09
2.10E-05
WP_007630848.1 212501 213353 + 283PF00005
PF13304
PF02463
PF09818
PF13558
ABC_tran
AAA_21
SMC_N
ABC_ATPase
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
SbcC/RAD50-like, Walker B motif
2.90E-33
1.10E-07
4.50E-06
1.00E-05
3.30E-05
WP_007630850.1 213425 214424 + 332PF02653BPD_transp_2Branched-chain amino acid transport system / permease component2.20E-34

Results for WP_009653290.1 [Klebsiella sp. OBRC7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004849478.1 44062 42313 - 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
2.00E-59
4.90E-36
1.80E-10
5.60E-06
4.90E-05
WP_009653267.1 46363 44107 - 751PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.50E-47
5.70E-18
2.30E-04
WP_004100704.1 46866 46578 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.10E-08
9.30E-05
WP_009653307.1 48690 47016 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.70E-98
1.20E-11
9.90E-07
WP_004849475.1 49511 48827 - 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
5.70E-82
2.00E-07
WP_004849473.1 51087 49803 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-152
WP_004849472.1 52249 51160 - 362PF00266Aminotran_5Aminotransferase class-V1.80E-68
WP_004849469.1 53128 52435 - 230PF04239DUF421Protein of unknown function (DUF421)7.20E-15
WP_009653290.1 53242 55003 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.40E-83
1.90E-66
WP_004849465.1 55389 56247 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_004130933.1 56298 58581 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-205
1.70E-43
WP_004871674.1 58784 59525 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.60E-32
8.10E-19
2.70E-06
WP_009653306.1 60437 59579 - 285PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.60E-16
1.20E-08
WP_004100672.1 60559 60835 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.50E-12
WP_009653269.1 60852 62118 + 421PF03611EIIC-GATPTS system sugar-specific permease component2.50E-118
WP_009653310.1 62130 62928 + 265PF00456
PF13292
PF00676
PF02775
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
6.70E-43
5.40E-15
1.50E-06
3.00E-04
WP_009653298.1 62927 63839 + 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
2.50E-27
5.20E-14

Results for WP_014908503.1 [Nocardiopsis alba ATCC BAA-2165] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014908358.1 1719021 1719720 + 232PF09335SNARE_assocSNARE associated Golgi protein8.30E-22
WP_014913083.1 1719872 1720889 + 338NO PFAM MATCH---
WP_017533064.1 1721353 1721536 + 60PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.10E-11
WP_041561752.1 1721624 1722542 + 305PF00005
PF13304
PF02702
ABC_tran
AAA_21
KdpD
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Osmosensitive K+ channel His kinase sensor domain
3.50E-27
2.60E-16
7.10E-04
WP_014912034.1 1722538 1723429 + 296PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
6.30E-18
8.40E-14
7.40E-04
WP_238543855.1 1723966 1726084 + 705PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.40E-12
WP_041561753.1 1726088 1727243 + 384PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.10E-15
WP_014913524.1 1727235 1728837 + 533NO PFAM MATCH---
WP_014908503.1 1728848 1730672 + 607PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-75
WP_148281597.1 1730668 1732039 + 456NO PFAM MATCH---
WP_014908521.1 1732035 1733736 + 566PF14028
PF00881
Lant_dehydr_C
Nitroreductase
Lantibiotic biosynthesis dehydratase C-term
Nitroreductase family
8.40E-75
4.80E-10
WP_014913041.1 1733994 1735812 + 605PF12806
PF00441
PF02770
PF12418
PF02771
Acyl-CoA_dh_C
Acyl-CoA_dh_1
Acyl-CoA_dh_M
AcylCoA_DH_N
Acyl-CoA_dh_N
Acetyl-CoA dehydrogenase C-terminal like
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase N terminal
Acyl-CoA dehydrogenase, N-terminal domain
2.10E-32
2.20E-17
4.10E-16
6.60E-10
4.50E-05
WP_187294537.1 1737083 1735895 - 395PF13828
PF13845
DUF4190
Septum_form
Domain of unknown function (DUF4190)
Septum formation
3.90E-06
1.50E-04
WP_014911987.1 1739197 1737904 - 430PF07690MFS_1Major Facilitator Superfamily5.50E-35
WP_014910506.1 1739781 1740153 + 123NO PFAM MATCH---
WP_014911030.1 1740227 1741418 + 396PF01266DAOFAD dependent oxidoreductase4.20E-41
WP_238543856.1 1741569 1743639 + 689PF00069
PF01636
Pkinase
APH
Protein kinase domain
Phosphotransferase enzyme family
3.10E-10
3.40E-04

Results for WP_014909609.1 [Nocardiopsis alba ATCC BAA-2165] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014910412.1 2803114 2806261 + 1048NO PFAM MATCH---
WP_017535902.1 2806631 2806778 + 48NO PFAM MATCH---
WP_041561842.1 2806915 2807983 + 355NO PFAM MATCH---
WP_014910611.1 2808032 2809379 + 448PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-62
WP_014912030.1 2809394 2810009 + 204NO PFAM MATCH---
WP_014908680.1 2810020 2811661 + 546NO PFAM MATCH---
WP_014913151.1 2811650 2812352 + 233NO PFAM MATCH---
WP_014912278.1 2812443 2814258 + 604NO PFAM MATCH---
WP_014909609.1 2814254 2816120 + 621PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-68
WP_014908930.1 2817044 2816234 - 269PF04705
PF00588
TSNR_N
SpoU_methylase
Thiostrepton-resistance methylase, N terminus
SpoU rRNA Methylase family
1.00E-53
5.40E-27
WP_041561843.1 2818320 2817105 - 404PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.70E-34
7.60E-06
WP_081536504.1 2818689 2818836 + 48NO PFAM MATCH---
WP_161628228.1 2819193 2821689 + 831PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus9.90E-19
WP_017535890.1 2821663 2822596 + 310PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.90E-48
WP_014912437.1 2823027 2823399 + 123PF00164Ribosom_S12_S23Ribosomal protein S12/S239.90E-42
WP_014911405.1 2823401 2823872 + 156PF00177Ribosomal_S7Ribosomal protein S7p/S5e3.00E-61
WP_026125249.1 2823920 2826032 + 703PF00009
PF03764
PF14492
PF00679
PF03144
GTP_EFTU
EFG_IV
EFG_III
EFG_C
GTP_EFTU_D2
Elongation factor Tu GTP binding domain
Elongation factor G, domain IV
Elongation Factor G, domain III
Elongation factor G C-terminus
Elongation factor Tu domain 2
3.50E-70
3.20E-46
2.60E-32
1.40E-30
2.80E-16

Results for WP_014910611.1 [Nocardiopsis alba ATCC BAA-2165] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014910862.1 2792792 2793470 + 225PF00687Ribosomal_L1Ribosomal protein L1p/L10e family2.30E-53
WP_014910739.1 2793873 2794401 + 175PF00466Ribosomal_L10Ribosomal protein L101.60E-27
WP_014912576.1 2794497 2794887 + 129PF00542
PF16320
Ribosomal_L12
Ribosomal_L12_N
Ribosomal protein L7/L12 C-terminal domain
Ribosomal protein L7/L12 dimerisation domain
5.30E-29
2.40E-18
WP_041561840.1 2795584 2799052 + 1155PF00562
PF04565
PF04561
PF04560
PF10385
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA polymerase Rpb2, domain 6
RNA polymerase Rpb2, domain 3
RNA polymerase Rpb2, domain 2
RNA polymerase Rpb2, domain 7
RNA polymerase beta subunit external 1 domain
1.30E-155
2.10E-28
1.30E-27
5.10E-27
2.60E-26
WP_014908532.1 2799086 2802965 + 1292PF04997
PF04998
PF00623
PF04983
PF05000
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA polymerase Rpb1, domain 1
RNA polymerase Rpb1, domain 5
RNA polymerase Rpb1, domain 2
RNA polymerase Rpb1, domain 3
RNA polymerase Rpb1, domain 4
1.90E-82
3.80E-64
4.90E-39
3.50E-24
9.10E-12
WP_014910412.1 2803114 2806261 + 1048NO PFAM MATCH---
WP_017535902.1 2806631 2806778 + 48NO PFAM MATCH---
WP_041561842.1 2806915 2807983 + 355NO PFAM MATCH---
WP_014910611.1 2808032 2809379 + 448PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-62
WP_014912030.1 2809394 2810009 + 204NO PFAM MATCH---
WP_014908680.1 2810020 2811661 + 546NO PFAM MATCH---
WP_014913151.1 2811650 2812352 + 233NO PFAM MATCH---
WP_014912278.1 2812443 2814258 + 604NO PFAM MATCH---
WP_014909609.1 2814254 2816120 + 621PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-68
WP_014908930.1 2817044 2816234 - 269PF04705
PF00588
TSNR_N
SpoU_methylase
Thiostrepton-resistance methylase, N terminus
SpoU rRNA Methylase family
1.00E-53
5.40E-27
WP_041561843.1 2818320 2817105 - 404PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.70E-34
7.60E-06
WP_081536504.1 2818689 2818836 + 48NO PFAM MATCH---

Results for WP_014911512.1 [Nocardiopsis alba ATCC BAA-2165] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014909034.1 3204970 3205762 + 263PF01746tRNA_m1G_MTtRNA (Guanine-1)-methyltransferase7.80E-68
WP_014908393.1 3205999 3206359 + 119PF01245Ribosomal_L19Ribosomal protein L198.30E-50
WP_017535506.1 3206430 3207269 + 279INFERRED GENE---
WP_014908883.1 3207516 3207849 + 110PF10611DUF2469Protein of unknown function (DUF2469)5.70E-51
WP_041561864.1 3208473 3208686 + 70NO PFAM MATCH---
WP_014909974.1 3208944 3209157 + 70NO PFAM MATCH---
WP_014913029.1 3209229 3210519 + 429PF13241NAD_binding_7Putative NAD(P)-binding7.10E-06
WP_238543720.1 3210455 3211004 + 182PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-04
WP_014911512.1 3211000 3212872 + 623PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-80
WP_014910155.1 3212868 3214527 + 552PF00881NitroreductaseNitroreductase family9.60E-20
WP_014912771.1 3214523 3216977 + 817PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.90E-20
WP_014908271.1 3216973 3218974 + 666PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.30E-71
WP_014913393.1 3218970 3220329 + 452PF00881NitroreductaseNitroreductase family8.40E-10
WP_014909482.1 3221565 3220386 - 392PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.40E-53
9.40E-10
WP_014910627.1 3222899 3221561 - 445PF00202Aminotran_3Aminotransferase class-III3.30E-92
WP_014908550.1 3223199 3223922 + 240PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
3.90E-41
3.40E-12
WP_014913287.1 3224061 3224457 + 131PF02021
PF08378
UPF0102
NERD
Uncharacterised protein family UPF0102
Nuclease-related domain
1.30E-25
3.40E-04

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_014891031.1 [Methylocystis sp. SC2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244435061.1 1608510 1608207 - 100NO PFAM MATCH---
WP_244435062.1 1608544 1609240 + 231NO PFAM MATCH---
WP_014891024.1 1612276 1609288 - 995PF13283
PF07719
PF14559
PF00515
PF13181
NfrA_C
TPR_2
TPR_19
TPR_1
TPR_8
Bacteriophage N adsorption protein A C-term
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.80E-58
9.10E-13
2.60E-11
9.10E-11
3.90E-08
WP_014891025.1 1612852 1614028 + 391PF02350Epimerase_2UDP-N-acetylglucosamine 2-epimerase5.40E-94
WP_014891026.1 1614139 1615600 + 486PF13641
PF13632
Glyco_tranf_2_3
Glyco_trans_2_3
Glycosyltransferase like family 2
Glycosyl transferase family group 2
1.90E-36
2.00E-31
WP_244435063.1 1615729 1617568 + 612PF05227
PF00072
PF02518
PF00512
CHASE3
Response_reg
HATPase_c
HisKA
CHASE3 domain
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
3.80E-35
1.70E-19
2.10E-19
1.60E-06
WP_014891029.1 1619395 1617814 - 526PF01425AmidaseAmidase4.90E-103
WP_051013243.1 1620807 1619442 - 454PF00881NitroreductaseNitroreductase family9.60E-21
WP_014891031.1 1623148 1620880 - 755PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-91
WP_014891033.1 1623940 1624408 + 155PF08753
PF01402
NikR_C
RHH_1
NikR C terminal nickel binding domain
Ribbon-helix-helix protein, copG family
2.20E-24
2.20E-08
WP_014891034.1 1624530 1626957 + 808PF07715
PF00593
Plug
TonB_dep_Rec
TonB-dependent Receptor Plug Domain
TonB dependent receptor
8.40E-14
2.60E-12
WP_014891035.1 1627191 1626984 - 68PF14384BrnA_antitoxinBrnA antitoxin of type II toxin-antitoxin system3.30E-15
WP_014891036.1 1627315 1629220 + 634PF08275
PF01807
PF13662
PF13155
PF10410
Toprim_N
zf-CHC2
Toprim_4
Toprim_2
DnaB_bind
DNA primase catalytic core, N-terminal domain
CHC2 zinc finger
Toprim domain
Toprim-like
DnaB-helicase binding domain of primase
3.10E-41
6.40E-24
4.00E-16
5.80E-13
9.00E-09
WP_014891037.1 1629420 1631436 + 671PF04546
PF04539
PF03979
PF04542
PF04545
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma-70, non-essential region
Sigma-70 region 3
Sigma-70 factor, region 1.1
Sigma-70 region 2
Sigma-70, region 4
2.40E-44
7.60E-29
1.60E-23
6.10E-22
8.00E-20
WP_014891038.1 1631440 1632169 + 242NO PFAM MATCH---
WP_014891039.1 1632397 1632190 - 68PF15919HicB_lk_antitoxHicB_like antitoxin of bacterial toxin-antitoxin system8.30E-14
WP_014891040.1 1632591 1632396 - 64PF07927HicA_toxinHicA toxin of bacterial toxin-antitoxin,5.40E-20

Results for WP_003488393.1 [Clostridium sporogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012703706.1 27556 28189 + 211INFERRED GENE---
WP_003488406.1 29452 28360 - 363PF07730HisKA_3Histidine kinase5.90E-16
WP_072585353.1 30354 29703 - 216PF02163Peptidase_M50Peptidase family M501.30E-12
WP_003488403.1 31734 30591 - 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
5.00E-36
2.10E-25
1.40E-13
WP_003488401.1 32860 31735 - 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.70E-34
3.70E-22
1.10E-15
2.10E-05
WP_042386113.1 33804 32871 - 310PF00005
PF13304
PF13604
PF13555
ABC_tran
AAA_21
AAA_30
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
P-loop containing region of AAA domain
1.00E-34
1.90E-10
8.10E-04
8.30E-04
WP_243152620.1 34652 33965 - 228PF19393DUF5968Family of unknown function (DUF5968)7.40E-60
WP_042386110.1 35340 34701 - 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.20E-10
WP_003488393.1 36673 35314 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-48
WP_003488391.1 37771 36688 - 360NO PFAM MATCH---
WP_243152619.1 38715 37773 - 313PF00881NitroreductaseNitroreductase family1.60E-20
WP_003359769.1 39068 38894 - 57NO PFAM MATCH---
WP_003488385.1 40406 39389 - 338NO PFAM MATCH---
WP_003488383.1 41420 40415 - 334PF09992NAGPAPhosphodiester glycosidase2.10E-48
WP_003488381.1 43246 41869 - 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
1.30E-48
3.80E-34
9.00E-09
1.20E-07
5.60E-06
WP_003488379.1 43805 43985 + 59NO PFAM MATCH---
WP_003488375.1 45406 44440 - 321PF00877
PF08239
NLPC_P60
SH3_3
NlpC/P60 family
Bacterial SH3 domain
1.80E-27
2.70E-05

Results for WP_002086902.1 [Bacillus cereus VD142] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002086913.1 469073 468239 - 277PF11667DUF3267Putative zincin peptidase4.10E-04
WP_002086912.1 469273 470056 + 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_002086911.1 470075 471308 + 410PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
2.00E-23
1.10E-07
6.20E-04
WP_002086910.1 471904 471481 - 140NO PFAM MATCH---
WP_002086908.1 472103 473438 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.10E-63
2.90E-20
3.40E-17
5.40E-15
1.70E-09
WP_002030461.1 473597 474008 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-48
WP_002086906.1 474631 474040 - 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
6.10E-19
4.50E-18
2.50E-17
2.60E-13
1.20E-12
WP_002086904.1 476286 474723 - 520PF00881NitroreductaseNitroreductase family8.90E-14
WP_002086902.1 478258 476308 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-85
WP_002086901.1 480174 478254 - 639NO PFAM MATCH---
WP_002086900.1 481556 480299 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.70E-81
6.10E-20
9.40E-13
8.90E-05
WP_002086899.1 484553 481685 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.30E-63
4.60E-55
1.70E-36
WP_002086897.1 485379 485595 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
6.20E-18
3.80E-10
2.80E-07
5.40E-05
7.20E-05
WP_001109902.1 485591 485969 + 125NO PFAM MATCH---
WP_002086895.1 485997 486180 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036573.1 486359 486677 + 106INFERRED GENE---
WP_033708300.1 486934 487093 + 52PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase5.30E-09

Results for WP_000192992.1 back to top

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Couldn't process WP_000192992.1 Genbank filestream. May be corrupt.

Results for WP_002151274.1 [Bacillus cereus HuA4-10] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002151255.1 31484 32327 + 280NO PFAM MATCH---
WP_002151257.1 32316 34023 + 568PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-62
WP_002151259.1 34037 34892 + 284PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-31
WP_002151260.1 34892 35705 + 270PF00881NitroreductaseNitroreductase family2.60E-07
WP_002151262.1 35723 36500 + 258NO PFAM MATCH---
WP_232299904.1 37029 37128 + 32NO PFAM MATCH---
WP_002151265.1 37347 37518 + 56PF19409Thiopep_preThiopeptide-type bacteriocin precursor7.60E-08
WP_002151271.1 37614 38391 + 258NO PFAM MATCH---
WP_002151274.1 38387 40166 + 592PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-43
WP_002151276.1 40183 41035 + 283PF00005
PF13304
PF03193
PF13555
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
P-loop containing region of AAA domain
6.50E-28
5.90E-11
2.20E-05
4.10E-04
WP_033718529.1 41043 41769 + 241PF12698ABC2_membrane_3ABC-2 family transporter protein1.20E-07
WP_002151278.1 41761 42856 + 364PF01546Peptidase_M20Peptidase family M20/M25/M407.90E-15
WP_033718494.1 43146 44406 + 419PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.10E-48
1.30E-08
2.50E-07
WP_002151280.1 44885 44438 - 148NO PFAM MATCH---
WP_002151281.1 45150 45663 + 170NO PFAM MATCH---
WP_000377754.1 45679 45873 + 64INFERRED GENE---
WP_002151282.1 46301 47219 + 305PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
1.00E-41
1.20E-08

Results for WP_002201330.1 [Bacillus cereus BAG5X1-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002201323.1 3855649 3855379 - 89NO PFAM MATCH---
WP_001034130.1 3855665 3856027 + 120INFERRED GENE---
WP_002011459.1 3856345 3856162 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_002201325.1 3856751 3856373 - 125NO PFAM MATCH---
WP_000428506.1 3856963 3856753 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_002201327.1 3857788 3860656 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-64
3.70E-55
3.90E-36
WP_002201328.1 3860785 3862042 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.70E-81
6.20E-20
1.60E-11
1.10E-04
WP_002201329.1 3862167 3864087 + 639NO PFAM MATCH---
WP_002201330.1 3864083 3866033 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-81
WP_002201331.1 3866055 3867618 + 520PF00881NitroreductaseNitroreductase family2.70E-14
WP_002201332.1 3867710 3868301 + 196PF13847
PF13649
PF08241
PF01209
PF13489
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
5.20E-19
7.10E-19
9.10E-18
2.20E-13
6.10E-13
WP_002158830.1 3868742 3868331 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.60E-49
WP_002201333.1 3869377 3868888 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.80E-09
7.20E-06
6.40E-05
WP_002201334.1 3870812 3869477 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.10E-61
4.00E-20
4.60E-18
6.70E-15
1.90E-10
WP_033716766.1 3871011 3871428 + 138NO PFAM MATCH---
WP_232302907.1 3872685 3871470 - 404PF13308YARHGYARHG domain4.20E-23
WP_002201337.1 3873508 3872728 - 259PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
8.80E-06
7.00E-05

Results for WP_002117144.1 [Bacillus mycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002117134.1 314025 313191 - 277PF11667DUF3267Putative zincin peptidase5.70E-04
WP_002117135.1 314220 315006 + 261PF20214
PF13240
PF12773
PF13248
DUF6574
zinc_ribbon_2
DZR
zf-ribbon_3
Family of unknown function (DUF6574)
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
4.20E-08
4.90E-06
2.20E-05
8.00E-05
WP_002117136.1 315025 316261 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.20E-22
1.60E-05
WP_002117138.1 316728 316305 - 140NO PFAM MATCH---
WP_002117140.1 316927 318262 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
1.20E-61
7.70E-21
2.20E-16
5.70E-15
2.30E-11
WP_002117141.1 318421 318832 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.50E-48
WP_002117142.1 319454 318863 - 196PF13847
PF13649
PF08241
PF13489
PF01209
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
3.60E-18
1.00E-17
9.20E-17
6.60E-13
7.80E-12
WP_002117143.1 321109 319546 - 520PF00881NitroreductaseNitroreductase family7.20E-14
WP_002117144.1 323081 321131 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-84
WP_002117145.1 324997 323077 - 639NO PFAM MATCH---
WP_002201328.1 326379 325122 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.70E-81
6.20E-20
1.60E-11
1.10E-04
WP_002117147.1 329376 326508 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.40E-63
3.70E-55
4.00E-36
WP_070141336.1 330201 330393 + 63PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.20E-17
3.20E-10
8.40E-07
3.00E-05
5.80E-05
WP_088057926.1 330593 330941 + 115NO PFAM MATCH---
WP_064476764.1 330969 331152 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_088057928.1 331286 331649 + 120NO PFAM MATCH---
WP_002158817.1 331665 331901 + 78INFERRED GENE---
WP_002168863.1 331845 332067 + 74INFERRED GENE---

Results for WP_002149730.1 [Bacillus cereus HuA4-10] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002149716.1 4127033 4126763 - 89NO PFAM MATCH---
WP_002149717.1 4127409 4127046 - 120NO PFAM MATCH---
WP_002011459.1 4127725 4127542 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_002149719.1 4128131 4127753 - 125NO PFAM MATCH---
WP_002149721.1 4128343 4128127 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.00E-10
1.20E-06
3.40E-05
7.40E-05
WP_002149726.1 4129321 4132189 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.90E-63
3.70E-55
5.50E-36
WP_002149727.1 4132318 4133575 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.80E-81
6.20E-20
4.90E-13
1.10E-04
WP_002149729.1 4133700 4135620 + 639NO PFAM MATCH---
WP_002149730.1 4135616 4137566 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-84
WP_002149736.1 4137588 4139151 + 520PF00881NitroreductaseNitroreductase family7.20E-12
WP_002149737.1 4139243 4139834 + 196PF13847
PF13649
PF08241
PF13489
PF01209
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
1.70E-18
2.80E-18
1.80E-17
2.10E-13
2.30E-12
WP_002149738.1 4140276 4139865 - 136PF13048DUF3908Protein of unknown function (DUF3908)5.80E-49
WP_002149739.1 4141017 4140528 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
8.00E-09
9.60E-06
2.40E-04
WP_002011439.1 4142452 4141117 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
3.50E-64
8.50E-21
2.60E-18
5.90E-15
6.70E-11
WP_002149741.1 4142649 4143072 + 140NO PFAM MATCH---
WP_002149743.1 4144353 4143114 - 412PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
9.00E-22
1.00E-05
WP_002149745.1 4145155 4144372 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
4.90E-06
1.80E-05
7.60E-05

Results for WP_000192974.1 back to top

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Couldn't process WP_000192974.1 Genbank filestream. May be corrupt.

Results for WP_002151257.1 [Bacillus cereus HuA4-10] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002151240.1 24066 23898 - 55NO PFAM MATCH---
WP_002151241.1 24652 24049 - 200PF04647AgrBAccessory gene regulator B1.70E-31
WP_002151242.1 25109 26429 + 439PF14501HATPase_c_5GHKL domain4.90E-14
WP_002151243.1 26440 27196 + 251PF04397
PF00072
LytTR
Response_reg
LytTr DNA-binding domain
Response regulator receiver domain
1.90E-22
1.50E-15
WP_033718488.1 27421 27871 + 149NO PFAM MATCH---
WP_002151251.1 27867 30396 + 842PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-14
WP_002151253.1 30405 31479 + 357NO PFAM MATCH---
WP_002151255.1 31484 32327 + 280NO PFAM MATCH---
WP_002151257.1 32316 34023 + 568PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-62
WP_002151259.1 34037 34892 + 284PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-31
WP_002151260.1 34892 35705 + 270PF00881NitroreductaseNitroreductase family2.60E-07
WP_002151262.1 35723 36500 + 258NO PFAM MATCH---
WP_232299904.1 37029 37128 + 32NO PFAM MATCH---
WP_002151265.1 37347 37518 + 56PF19409Thiopep_preThiopeptide-type bacteriocin precursor7.60E-08
WP_002151271.1 37614 38391 + 258NO PFAM MATCH---
WP_002151274.1 38387 40166 + 592PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-43
WP_002151276.1 40183 41035 + 283PF00005
PF13304
PF03193
PF13555
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
P-loop containing region of AAA domain
6.50E-28
5.90E-11
2.20E-05
4.10E-04

Results for WP_002168869.1 [Bacillus mycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002126037.1 4013981 4013711 - 89NO PFAM MATCH---
WP_001034130.1 4013997 4014360 + 121INFERRED GENE---
WP_002086895.1 4014677 4014494 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_002168864.1 4015083 4014705 - 125NO PFAM MATCH---
WP_002168865.1 4015295 4015079 - 71PF01381
PF12844
PF13560
PF04545
PF13413
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_25
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
Helix-turn-helix domain
1.80E-18
3.20E-10
4.60E-08
4.90E-05
9.30E-05
WP_002168866.1 4016190 4019058 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
4.60E-64
3.80E-55
5.20E-36
WP_002168867.1 4019187 4020444 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.20E-80
5.80E-20
9.60E-13
1.80E-04
WP_002168868.1 4020569 4022489 + 639NO PFAM MATCH---
WP_002168869.1 4022485 4024435 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-83
WP_002168870.1 4024457 4026020 + 520PF00881NitroreductaseNitroreductase family4.80E-14
WP_002168871.1 4026112 4026703 + 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
1.10E-18
5.70E-18
5.60E-17
5.20E-13
7.30E-12
WP_002030461.1 4027145 4026734 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-48
WP_002168872.1 4028639 4027304 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
8.90E-61
9.90E-21
5.80E-17
6.10E-15
6.80E-11
WP_002168873.1 4028837 4029266 + 142NO PFAM MATCH---
WP_002168874.1 4030545 4029306 - 412PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.10E-23
4.20E-05
WP_002168875.1 4031347 4030564 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_002168876.1 4031547 4032381 + 277PF11667DUF3267Putative zincin peptidase6.40E-04

Results for WP_002158825.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_078173285.1 88848 88578 - 89NO PFAM MATCH---
WP_078173286.1 89227 88864 - 120NO PFAM MATCH---
WP_002011459.1 89545 89362 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_206775119.1 89921 89573 - 115NO PFAM MATCH---
WP_002158820.1 90163 89953 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
5.70E-18
3.50E-10
2.60E-07
4.90E-05
6.80E-05
WP_078173287.1 90988 93856 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.70E-64
3.80E-55
3.90E-36
WP_002201328.1 93985 95242 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.70E-81
6.20E-20
1.60E-11
1.10E-04
WP_199709461.1 95367 97287 + 639NO PFAM MATCH---
WP_002158825.1 97283 99233 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.80E-82
WP_078173289.1 99255 100818 + 520PF00881NitroreductaseNitroreductase family2.70E-13
WP_002158829.1 100910 101501 + 197INFERRED GENE---
WP_078173290.1 101942 101531 - 136PF13048DUF3908Protein of unknown function (DUF3908)4.50E-49
WP_206775120.1 103399 102100 - 432PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
3.10E-56
8.60E-21
2.90E-17
7.10E-15
5.00E-09
WP_002202734.1 103634 104063 + 142NO PFAM MATCH---
WP_199709462.1 105342 104103 - 412PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.10E-23
6.30E-06
8.20E-04
WP_199709463.1 106144 105361 - 260PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
5.40E-05
WP_206775114.1 106330 107173 + 280PF11667DUF3267Putative zincin peptidase4.20E-04

Results for WP_000192987.1 [Bacillus cereus group sp. BfR-BA-01347] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128581.1 52377 53061 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)2.60E-75
WP_000424502.1 53909 53075 - 277PF11667DUF3267Putative zincin peptidase8.50E-04
WP_000650093.1 54105 54891 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.30E-06
7.80E-04
WP_000861667.1 54910 56146 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.10E-22
3.30E-06
WP_000332396.1 56615 56192 - 140PF13157EnasEndospore appendages9.60E-04
WP_001110237.1 56814 58149 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.30E-64
2.30E-20
3.20E-17
3.20E-15
3.00E-10
WP_000996782.1 58309 58720 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001175551.1 60292 58750 - 513PF00881NitroreductaseNitroreductase family7.20E-13
WP_000192987.1 62257 60307 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-84
WP_001061558.1 64173 62253 - 639NO PFAM MATCH---
WP_000569894.1 65557 64297 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.10E-13
1.70E-04
WP_000197156.1 68558 65690 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_001178294.1 69385 69568 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_002181770.1 69700 70063 + 120NO PFAM MATCH---
WP_002158817.1 70079 70327 + 82INFERRED GENE---
WP_001169497.1 70485 71082 + 198PF12870DUF4878Domain of unknown function (DUF4878)2.30E-04
WP_000846650.1 71951 71486 - 154PF16723DUF5065Domain of unknown function (DUF5065)1.40E-04

Results for WP_002169251.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_002166126.1 [Bacillus sp. TH30] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
JFU20_RS30155 1275514 1275586 + 24INFERRED GENE---
WP_001036573.1 1275929 1276292 + 121INFERRED GENE---
WP_002011459.1 1276611 1276428 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109902.1 1277017 1276639 - 125NO PFAM MATCH---
WP_002011455.1 1277229 1277013 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.20E-05
7.40E-05
WP_002011454.1 1278054 1280922 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
4.20E-64
4.60E-55
1.70E-36
WP_002011452.1 1281051 1282308 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.20E-80
5.90E-20
4.90E-13
1.80E-04
WP_002166125.1 1282433 1284353 + 639NO PFAM MATCH---
WP_002166126.1 1284349 1286299 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-84
WP_201038527.1 1286321 1287884 + 520PF00881NitroreductaseNitroreductase family5.30E-14
WP_002011445.1 1287976 1288567 + 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.90E-19
4.40E-18
2.80E-17
1.70E-13
4.30E-12
WP_002011443.1 1289010 1288599 - 136PF13048DUF3908Protein of unknown function (DUF3908)7.80E-49
WP_207199013.1 1290468 1289169 - 432PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.50E-57
1.60E-20
1.10E-16
6.20E-15
9.00E-09
WP_002149741.1 1290701 1291124 + 140NO PFAM MATCH---
WP_201038529.1 1292405 1291166 - 412PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
9.40E-22
1.00E-05
WP_201038530.1 1293207 1292424 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_207198948.1 1293549 1294392 + 280PF11667DUF3267Putative zincin peptidase7.90E-04

Results for WP_000192995.1 [Bacillus cereus group sp. BfR-BA-01427] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002126037.1 125920 126169 + 83INFERRED GENE---
WP_001036584.1 126548 126185 - 120NO PFAM MATCH---
WP_001178303.1 126863 126680 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109913.1 127269 126891 - 125NO PFAM MATCH---
WP_000428506.1 127481 127271 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_000197119.1 128303 131171 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.80E-63
5.10E-55
1.20E-36
WP_000569896.1 131304 132564 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_001061568.1 132688 134608 + 639NO PFAM MATCH---
WP_000192995.1 134604 136554 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-84
WP_001175548.1 136569 138111 + 513PF00881NitroreductaseNitroreductase family8.90E-12
WP_000996780.1 138552 138141 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.70E-53
WP_001110228.1 140047 138712 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.40E-64
3.70E-20
1.00E-16
1.60E-15
3.40E-10
WP_000332414.1 140246 140675 + 142NO PFAM MATCH---
WP_001099905.1 141949 140713 - 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.10E-22
1.40E-06
2.20E-04
WP_000650094.1 142754 141968 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.20E-06
7.70E-04
WP_000424531.1 142950 143784 + 277PF11667DUF3267Putative zincin peptidase8.30E-04
WP_000172950.1 144482 143798 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)7.60E-74

Results for WP_000192984.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_121868128.1 607564 606967 - 198PF12870DUF4878Domain of unknown function (DUF4878)2.50E-04
WP_002168863.1 607722 608267 + 181INFERRED GENE---
WP_002126037.1 608348 608597 + 83INFERRED GENE---
WP_136363202.1 608976 608613 - 120NO PFAM MATCH---
WP_001178302.1 609291 609108 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_000197120.1 610118 612986 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_000569900.1 613119 614379 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.00E-13
1.70E-04
WP_001061553.1 614503 616423 + 639NO PFAM MATCH---
WP_000192984.1 616419 618369 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-84
WP_001176760.1 618384 619926 + 513PF00881NitroreductaseNitroreductase family8.90E-12
WP_000996782.1 620367 619956 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001110229.1 621862 620527 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.30E-64
3.70E-20
9.70E-17
1.80E-15
3.40E-10
WP_000332407.1 622059 622491 + 143NO PFAM MATCH---
WP_063220253.1 623772 622536 - 411PF13308
PF13240
PF13248
PF12773
YARHG
zinc_ribbon_2
zf-ribbon_3
DZR
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
Double zinc ribbon
3.00E-22
7.70E-07
3.00E-06
9.80E-04
WP_050279596.1 624577 623791 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
8.10E-06
7.70E-04
WP_048538162.1 624773 625607 + 277NO PFAM MATCH---
WP_100654929.1 626305 625621 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)4.40E-76

Results for WP_000512737.1 [Bacillus cereus VD115] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001191542.1 74123 75317 + 397PF13437
PF13533
PF16576
HlyD_3
Biotin_lipoyl_2
HlyD_D23
HlyD family secretion protein
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
8.80E-09
1.00E-08
3.40E-06
WP_000631624.1 75313 75994 + 226PF00005
PF02463
PF13304
PF13555
ABC_tran
SMC_N
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.30E-32
5.80E-07
1.10E-04
4.70E-04
WP_000054398.1 75990 77190 + 399PF12704
PF02687
MacB_PCD
FtsX
MacB-like periplasmic core domain
FtsX-like permease family
5.50E-34
1.30E-23
WP_000387961.1 77298 77997 + 232PF04893Yip1Yip1 domain6.70E-21
WP_000323594.1 78816 78150 - 221PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.90E-14
WP_086557922.1 78963 79223 + 86INFERRED GENE---
WP_000435812.1 80125 80296 + 56NO PFAM MATCH---
WP_000409411.1 80391 81351 + 319NO PFAM MATCH---
WP_000512737.1 81363 82653 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-51
WP_000713012.1 82681 83503 + 273PF00881NitroreductaseNitroreductase family3.80E-10
WP_001060915.1 83495 85142 + 548PF00664
PF00005
PF13304
ABC_membrane
ABC_tran
AAA_21
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
1.20E-22
1.30E-18
6.70E-05
WP_000033735.1 85138 86152 + 337PF16169
PF14399
PF13529
DUF4872
BtrH_N
Peptidase_C39_2
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
Peptidase_C39 like family
1.80E-26
1.70E-16
5.50E-04
WP_000345286.1 86279 86744 + 154NO PFAM MATCH---
WP_001053961.1 86884 87208 + 108INFERRED GENE---

Results for WP_002170900.1 [Bacillus cereus VD107] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002170893.1 469566 470349 + 260PF12773
PF13240
PF10571
PF13248
DZR
zinc_ribbon_2
UPF0547
zf-ribbon_3
Double zinc ribbon
zinc-ribbon domain
Uncharacterised protein family UPF0547
zinc-ribbon domain
2.00E-05
2.00E-05
1.40E-04
5.30E-04
WP_002170894.1 470368 471607 + 412PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
4.10E-22
1.10E-06
3.00E-04
WP_000332402.1 472091 472283 + 64INFERRED GENE---
WP_002170895.1 472386 473721 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.00E-62
4.80E-20
1.60E-18
1.30E-14
2.30E-10
WP_002170896.1 473821 474310 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.00E-10
1.20E-05
2.90E-04
WP_002170897.1 474543 474954 + 136PF13048DUF3908Protein of unknown function (DUF3908)4.40E-48
WP_002170898.1 475576 474985 - 196PF13649
PF13847
PF08241
PF13489
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.30E-18
5.90E-18
2.80E-17
1.10E-11
1.50E-11
WP_002170899.1 477230 475667 - 520PF00881NitroreductaseNitroreductase family3.70E-14
WP_002170900.1 479202 477252 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.10E-84
WP_002170901.1 481118 479198 - 639NO PFAM MATCH---
WP_002170902.1 482503 481243 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.40E-82
6.00E-20
4.10E-13
1.10E-04
WP_002170903.1 485500 482632 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.30E-63
4.00E-55
1.20E-36
WP_002170904.1 486325 486535 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
5.70E-18
3.50E-10
2.60E-07
5.00E-05
6.80E-05
WP_002170905.1 486537 486915 + 125NO PFAM MATCH---
WP_002170906.1 486943 487126 + 60PF13121DUF3976Domain of unknown function (DUF3976)6.00E-28
WP_002170907.1 487261 487624 + 120NO PFAM MATCH---
WP_002170908.1 487667 488213 + 181PF19681DUF6183Family of unknown function (DUF6183)8.60E-04

Results for WP_000615608.1 [Bacillus cereus VD115] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195087.1 3647619 3647349 - 89NO PFAM MATCH---
WP_001034133.1 3647999 3647636 - 120NO PFAM MATCH---
WP_001178305.1 3648317 3648134 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001000062.1 3648723 3648345 - 125NO PFAM MATCH---
WP_000428516.1 3648935 3648725 - 69PF01381
PF12844
PF13560
PF08279
PF04545
HTH_3
HTH_19
HTH_31
HTH_11
Sigma70_r4
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
HTH domain
Sigma-70, region 4
4.30E-18
1.70E-10
1.30E-06
7.00E-05
1.10E-04
WP_000197162.1 3649757 3652625 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.50E-63
5.10E-55
1.50E-36
WP_000569929.1 3652754 3654014 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.20E-20
5.10E-13
8.10E-05
WP_001061530.1 3654140 3656060 + 639NO PFAM MATCH---
WP_000615608.1 3656056 3658006 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-85
WP_001175565.1 3658022 3659564 + 513PF00881NitroreductaseNitroreductase family3.20E-13
WP_000996792.1 3660004 3659593 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.30E-48
WP_000259508.1 3660742 3660253 - 162PF00583
PF13508
Acetyltransf_1
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
3.30E-09
8.10E-06
WP_001110245.1 3662177 3660842 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.10E-63
3.50E-19
4.00E-17
8.40E-15
8.00E-10
WP_000332397.1 3662376 3662805 + 142NO PFAM MATCH---
WP_001099930.1 3664081 3662845 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
7.80E-22
2.70E-06
WP_000650062.1 3664886 3664100 - 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.30E-05
WP_000397498.1 3665087 3665921 + 277NO PFAM MATCH---

Results for WP_000192979.1 [Bacillus thuringiensis Sbt003] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128580.1 281477 282161 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)4.30E-75
WP_000424534.1 283009 282175 - 277PF11667DUF3267Putative zincin peptidase9.10E-04
WP_000650086.1 283205 283991 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.20E-06
7.80E-04
WP_001099921.1 284010 285246 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.00E-22
5.50E-06
7.20E-04
WP_000332407.1 285723 285291 - 143NO PFAM MATCH---
WP_001110223.1 285920 287255 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.70E-64
2.30E-20
4.70E-17
3.10E-15
3.00E-10
WP_000996782.1 287415 287826 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001176764.1 289398 287856 - 513PF00881NitroreductaseNitroreductase family6.90E-12
WP_000192979.1 291363 289413 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-85
WP_001061557.1 293279 291359 - 639NO PFAM MATCH---
WP_000569896.1 294665 293405 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000197176.1 297666 294798 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.20E-55
1.20E-36
WP_001178291.1 298493 298676 + 60PF13121DUF3976Domain of unknown function (DUF3976)8.70E-27
WP_000632204.1 299657 298787 - 289PF01609
PF13612
PF05598
PF13751
DDE_Tnp_1
DDE_Tnp_1_3
DUF772
DDE_Tnp_1_6
Transposase DDE domain
Transposase DDE domain
Transposase domain (DUF772)
Transposase DDE domain
2.30E-20
1.20E-10
4.70E-09
1.20E-06
WP_001036584.1 299810 300173 + 120NO PFAM MATCH---
WP_187293506.1 300283 300442 + 52NO PFAM MATCH---
WP_002168863.1 300523 301069 + 182INFERRED GENE---

Results for WP_002135041.1 [Bacillus cereus HuA2-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002135030.1 691728 692514 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
9.50E-06
1.30E-04
WP_002135031.1 692533 693769 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
8.80E-22
2.30E-05
WP_002135033.1 694238 693809 - 142NO PFAM MATCH---
WP_002135034.1 694437 695772 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
7.40E-61
5.90E-19
5.70E-16
5.40E-15
1.60E-09
WP_002135035.1 695873 696362 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
7.00E-09
9.90E-06
1.00E-04
WP_002135036.1 696617 697028 + 136PF13048DUF3908Protein of unknown function (DUF3908)7.00E-49
WP_002135038.1 697649 697058 - 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.90E-19
4.30E-18
2.80E-17
1.80E-13
3.80E-12
WP_002135039.1 699304 697741 - 520PF00881NitroreductaseNitroreductase family3.20E-13
WP_002135041.1 701276 699326 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-84
WP_002135043.1 703192 701272 - 639NO PFAM MATCH---
WP_002135044.1 704574 703317 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.80E-81
6.20E-20
4.80E-13
1.50E-04
WP_002135045.1 707571 704703 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.00E-64
4.70E-55
1.70E-36
WP_002135046.1 708397 708613 + 71PF01381
PF12844
PF13560
PF04545
PF13413
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_25
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
Helix-turn-helix domain
5.00E-18
3.60E-10
1.90E-07
3.70E-05
9.40E-05
WP_001109902.1 708609 708987 + 125NO PFAM MATCH---
WP_002086895.1 709015 709198 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_043313406.1 709347 709686 + 112NO PFAM MATCH---
WP_043313409.1 709949 710108 + 52PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase7.90E-08

Results for WP_014935351.1 [Brachyspira pilosicoli B2904] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014935343.1 423069 422604 - 154PF04074DUF386YhcH/YjgK/YiaL1.10E-26
WP_014935344.1 424038 423141 - 298PF00701DHDPSDihydrodipicolinate synthetase family2.20E-78
WP_014935345.1 424517 425816 + 432PF13088
PF13859
PF02012
BNR_2
BNR_3
BNR
BNR repeat-like domain
BNR repeat-like domain
BNR/Asp-box repeat
4.70E-19
2.10E-08
4.30E-06
WP_014935346.1 425904 427176 + 423PF05540Serpulina_VSPSerpulina hyodysenteriae variable surface protein4.00E-49
WP_014935347.1 427615 427249 - 121PF06803DUF1232Protein of unknown function (DUF1232)1.60E-08
WP_014935348.1 427766 428948 + 393PF07221
PF03663
GlcNAc_2-epim
Glyco_hydro_76
N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
Glycosyl hydrolase family 76
6.30E-50
3.80E-06
WP_014935349.1 429082 430093 + 336PF00881NitroreductaseNitroreductase family1.80E-14
WP_014935350.1 430126 431215 + 362NO PFAM MATCH---
WP_014935351.1 431582 432923 + 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-38
WP_014935352.1 432897 433551 + 217PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.30E-10
WP_014935353.1 433547 434288 + 246NO PFAM MATCH---
WP_014935354.1 434627 435323 + 231PF00005
PF13304
PF02463
PF13175
PF13476
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
2.10E-30
1.70E-15
1.40E-10
1.40E-07
8.60E-06
WP_014933812.1 435500 436217 + 238PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.60E-20
1.50E-12
WP_014935355.1 436303 436633 + 109PF03551PadRTranscriptional regulator PadR-like family1.90E-21
WP_014935356.1 436659 437310 + 216NO PFAM MATCH---
WP_252831737.1 437309 437651 + 113NO PFAM MATCH---
WP_014935358.1 437665 437968 + 100NO PFAM MATCH---

Results for WP_010015541.1 [Leuconostoc gelidum subsp. aenigmaticum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_029508487.1 77637 76635 - 333PF13377
PF13407
PF00356
PF00532
PF01381
Peripla_BP_3
Peripla_BP_4
LacI
Peripla_BP_1
HTH_3
Periplasmic binding protein-like domain
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
Periplasmic binding proteins and sugar binding domain of LacI family
Helix-turn-helix
7.60E-18
3.60E-17
4.00E-14
2.40E-11
4.10E-05
WP_010015550.1 78728 77786 - 313PF02826
PF00389
PF00670
PF03446
2-Hacid_dh_C
2-Hacid_dh
AdoHcyase_NAD
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
9.30E-56
1.60E-28
1.40E-06
2.20E-04
WP_224156802.1 79533 78747 - 261PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
2.00E-57
2.60E-56
5.10E-09
3.90E-06
WP_010015548.1 80298 79551 - 248PF01261AP_endonuc_2Xylose isomerase-like TIM barrel4.90E-05
WP_010015547.1 80494 81769 + 424NO PFAM MATCH---
WP_010015545.1 81788 82793 + 334PF10282LactonaseLactonase, 7-bladed beta-propeller2.00E-76
WP_010015543.1 84920 83525 - 464PF00005
PF13191
PF02463
PF13304
PF13555
ABC_tran
AAA_16
SMC_N
AAA_21
AAA_29
ABC transporter
AAA ATPase domain
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.10E-30
2.10E-10
4.40E-08
5.80E-08
7.70E-08
WP_010015542.1 86151 84909 - 413PF07690MFS_1Major Facilitator Superfamily4.60E-07
WP_010015541.1 87179 86147 - 343PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-09
WP_010015539.1 87826 87253 - 190NO PFAM MATCH---
WP_010015538.1 88566 88422 - 47NO PFAM MATCH---
WP_010015537.1 89587 88696 - 296PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
4.30E-14
8.00E-11
WP_010015536.1 89764 90700 + 311PF00892EamAEamA-like transporter family8.00E-23
WP_224154650.1 92158 90925 - 410PF07690
PF05977
PF12832
MFS_1
MFS_3
MFS_1_like
Major Facilitator Superfamily
Transmembrane secretion effector
MFS_1 like family
3.60E-44
4.30E-11
5.20E-11
WP_010015533.1 92928 92154 - 257PF00005
PF13304
PF02463
PF09818
PF01637
ABC_tran
AAA_21
SMC_N
ABC_ATPase
ATPase_2
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
ATPase domain predominantly from Archaea
1.30E-31
1.80E-12
4.20E-08
1.60E-05
4.40E-05
WP_010015532.1 93910 92938 - 323PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3.70E-49
8.50E-17
WP_010015531.1 95164 93940 - 407PF00155
PF12897
PF01041
PF01212
Aminotran_1_2
Asp_aminotransf
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotransferase class I and II
Aspartate amino-transferase
DegT/DnrJ/EryC1/StrS aminotransferase family
Beta-eliminating lyase
1.90E-34
2.50E-12
8.70E-06
7.20E-05

Results for WP_014992706.1 [Alloalcanivorax dieselolei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014992715.1 134193 133206 - 328PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
3.80E-23
1.70E-14
2.00E-05
WP_014992714.1 134573 134330 - 80NO PFAM MATCH---
WP_081586812.1 135448 134587 - 286PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)7.90E-17
WP_167321194.1 135807 136434 + 208PF00196GerEBacterial regulatory proteins, luxR family1.90E-12
WP_014992711.1 137564 136454 - 369PF00850Hist_deacetylHistone deacetylase domain4.50E-84
WP_014992710.1 138334 137701 - 210PF02798
PF13417
PF13409
PF00043
PF13410
GST_N
GST_N_3
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
1.00E-19
1.40E-14
1.10E-13
3.90E-08
8.50E-06
WP_014992709.1 138895 138496 - 132PF01850PINPIN domain5.00E-10
WP_014992708.1 139086 138891 - 64PF09957VapB_antitoxinBacterial antitoxin of type II TA system, VapB6.30E-17
WP_014992706.1 142013 139793 - 739PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.80E-73
1.40E-71
4.00E-09
WP_041716689.1 142187 142751 + 187PF08281
PF04542
PF04545
PF13384
PF07638
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
Homeodomain-like domain
ECF sigma factor
2.60E-17
2.60E-11
2.90E-09
1.70E-05
2.80E-04
WP_014992704.1 142738 143653 + 304PF04773
PF16220
FecR
DUF4880
FecR protein
Domain of unknown function (DUF4880)
1.90E-19
6.00E-08
WP_014992703.1 143932 146236 + 767PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
1.20E-48
1.60E-14
8.90E-13
WP_014992702.1 146249 147452 + 400PF03929PepSY_TMPepSY-associated TM region4.30E-55
WP_014992701.1 148928 147542 - 461PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.50E-07
1.40E-04
WP_051015431.1 149529 149271 - 85NO PFAM MATCH---

Results for WP_014986603.1 [Nocardia brasiliensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014986611.1 83763 81369 - 797PF02775TPP_enzyme_CThiamine pyrophosphate enzyme, C-terminal TPP binding domain3.60E-04
WP_014986610.1 84653 83804 - 282PF04072LCMLeucine carboxyl methyltransferase5.90E-26
WP_041564522.1 85812 84666 - 381PF00296Bac_luciferaseLuciferase-like monooxygenase7.40E-50
WP_141691741.1 86296 85876 - 139NO PFAM MATCH---
WP_014986607.1 86501 87044 + 180PF00132HexapepBacterial transferase hexapeptide (six repeats)7.90E-12
WP_014986606.1 87211 88414 + 400PF07690
PF00083
PF01306
MFS_1
Sugar_tr
LacY_symp
Major Facilitator Superfamily
Sugar (and other) transporter
LacY proton/sugar symporter
1.10E-35
1.40E-13
3.10E-04
WP_014986605.1 88452 88872 + 139PF07876DabbStress responsive A/B Barrel Domain4.20E-14
WP_014986604.1 90370 88948 - 473PF00881NitroreductaseNitroreductase family2.40E-09
WP_014986603.1 92265 90381 - 627PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-78
WP_014986602.1 94075 92254 - 606NO PFAM MATCH---
WP_014986600.1 95608 94531 - 358PF10117McrBCMcrBC 5-methylcytosine restriction system component8.60E-16
WP_237748149.1 97358 95609 - 582PF07728
PF13401
PF00004
PF13191
PF01078
AAA_5
AAA_22
AAA
AAA_16
Mg_chelatase
AAA domain (dynein-related subfamily)
AAA domain
ATPase family associated with various cellular activities (AAA)
AAA ATPase domain
Magnesium chelatase, subunit ChlI
3.20E-24
3.60E-06
3.30E-04
4.10E-04
5.20E-04
WP_014986598.1 97654 99886 + 743PF00916
PF00484
PF16983
Sulfate_transp
Pro_CA
MFS_MOT1
Sulfate permease family
Carbonic anhydrase
Molybdate transporter of MFS superfamily
2.10E-69
2.90E-39
5.40E-06
WP_014986597.1 100227 102405 + 725PF00916
PF00484
Sulfate_transp
Pro_CA
Sulfate permease family
Carbonic anhydrase
4.30E-73
1.30E-44
WP_014986596.1 102498 102918 + 139PF09656PGPGWPutative transmembrane protein (PGPGW)5.50E-23
WP_041562946.1 102890 103529 + 212PF11575FhuF_CFhuF 2Fe-2S C-terminal domain1.80E-05
WP_014986594.1 103710 105759 + 682PF00587
PF03129
PF07973
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
tRNA synthetase class II core domain (G, H, P, S and T)
Anticodon binding domain
Threonyl and Alanyl tRNA synthetase second additional domain
4.10E-35
1.20E-13
1.90E-12

Results for WP_014991658.1 [Actinobacillus suis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014991650.1 385637 386996 + 452PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
2.50E-23
1.80E-06
WP_039195084.1 389407 387430 - 658PF00884SulfataseSulfatase2.60E-46
WP_014991652.1 390233 389444 - 262PF03473
PF03476
MOSC
MOSC_N
MOSC domain
MOSC N-terminal beta barrel domain
1.60E-25
1.70E-17
WP_014991653.1 390377 390602 + 74PF02609Exonuc_VII_SExonuclease VII small subunit1.30E-18
WP_014991654.1 390610 391504 + 297PF00348polyprenyl_syntPolyprenyl synthetase1.70E-53
WP_014991655.1 391925 391580 - 114PF04342DMT_6Putative member of DMT superfamily (DUF486)8.20E-41
WP_014991656.1 393528 392025 - 500PF00152
PF01336
PF01409
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA synthetases class II (D, K and N)
OB-fold nucleic acid binding domain
tRNA synthetases class II core domain (F)
1.20E-79
9.20E-15
1.20E-05
WP_014991657.1 395138 393662 - 491PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.90E-102
3.20E-06
WP_014991658.1 395393 397157 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.90E-77
2.50E-66
WP_014991659.1 399802 397189 - 870PF19778
PF04851
PF00270
PF02562
RE_endonuc
ResIII
DEAD
PhoH
Endonuclease domain
Type III restriction enzyme, res subunit
DEAD/DEAH box helicase
PhoH-like protein
6.90E-32
1.10E-18
1.20E-07
1.10E-04
WP_014991660.1 401789 399941 - 615PF01555N6_N4_MtaseDNA methylase2.60E-36
WP_014991661.1 401998 402961 + 320PF08003
PF13489
PF13847
PF08241
PF13649
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_11
Methyltransf_25
Protein of unknown function (DUF1698)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.80E-168
4.10E-10
8.10E-10
1.90E-08
1.80E-07
WP_014991662.1 403106 403442 + 111NO PFAM MATCH---
WP_014991663.1 404604 403506 - 365PF03562
PF06725
MltA
3D
MltA specific insert domain
3D domain
3.60E-46
6.90E-25
WP_014991664.1 404917 406471 + 517PF02601
PF13742
PF01336
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Exonuclease VII, large subunit
OB-fold nucleic acid binding domain
OB-fold nucleic acid binding domain
1.30E-101
5.90E-31
4.60E-06
WP_005607771.1 406964 407795 + 276PF13614
PF01656
PF09140
PF02374
PF10609
AAA_31
CbiA
MipZ
ArsA_ATPase
ParA
AAA domain
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
Anion-transporting ATPase
NUBPL iron-transfer P-loop NTPase
3.10E-20
1.50E-12
2.30E-05
4.30E-05
1.00E-04
WP_005607773.1 407798 409154 + 451PF03796
PF00772
PF13481
PF06745
DnaB_C
DnaB
AAA_25
ATPase
DnaB-like helicase C terminal domain
DnaB-like helicase N terminal domain
AAA domain
KaiC
1.30E-87
1.70E-29
8.00E-11
2.00E-06

Results for WP_014933816.1 [Brachyspira pilosicoli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013243877.1 1419856 1419391 - 154PF04074DUF386YhcH/YjgK/YiaL1.40E-26
WP_013243876.1 1420826 1419929 - 298PF00701DHDPSDihydrodipicolinate synthetase family3.70E-78
WP_157142801.1 1421305 1422604 + 432PF13088
PF13859
PF02012
BNR_2
BNR_3
BNR
BNR repeat-like domain
BNR repeat-like domain
BNR/Asp-box repeat
4.60E-19
2.30E-08
3.90E-06
WP_015274839.1 1422692 1423964 + 423PF05540Serpulina_VSPSerpulina hyodysenteriae variable surface protein1.40E-48
WP_115590006.1 1424404 1424038 - 121PF06803
PF06728
DUF1232
PIG-U
Protein of unknown function (DUF1232)
GPI transamidase subunit PIG-U
1.60E-08
7.60E-04
WP_157142802.1 1424556 1425738 + 393PF07221
PF03663
GlcNAc_2-epim
Glyco_hydro_76
N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
Glycosyl hydrolase family 76
1.90E-49
4.50E-06
WP_157142803.1 1425872 1426883 + 336PF00881NitroreductaseNitroreductase family1.80E-14
WP_015274843.1 1426916 1428002 + 361NO PFAM MATCH---
WP_014933816.1 1428057 1429398 + 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.00E-38
WP_157142804.1 1429372 1430026 + 217PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like9.20E-10
WP_157142805.1 1430022 1430763 + 246NO PFAM MATCH---
WP_157142806.1 1431102 1431798 + 231PF00005
PF13304
PF02463
PF13175
PF13476
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
1.90E-30
1.10E-15
4.10E-10
2.00E-07
3.30E-05
WP_157142807.1 1431984 1432701 + 238PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.20E-20
4.20E-12
WP_014935355.1 1433125 1433455 + 109PF03551PadRTranscriptional regulator PadR-like family1.90E-21
WP_157142808.1 1433481 1434132 + 216NO PFAM MATCH---
WP_232472800.1 1434131 1434791 + 219NO PFAM MATCH---
WP_157142809.1 1434881 1435886 + 334NO PFAM MATCH---

Results for WP_015100718.1 [Saccharothrix espanaensis DSM 44229] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015100710.1 3550529 3551288 + 252PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.20E-08
WP_015100711.1 3551284 3552259 + 324PF01497Peripla_BP_2Periplasmic binding protein1.20E-21
WP_015100712.1 3552255 3553164 + 302PF01032FecCDFecCD transport family2.30E-54
WP_015100713.1 3553160 3554102 + 313PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
3.70E-61
2.10E-06
WP_015100714.1 3554098 3554890 + 263PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.60E-31
2.40E-10
2.40E-07
3.30E-04
WP_015100715.1 3554939 3555050 + 36NO PFAM MATCH---
WP_015100716.1 3555111 3555891 + 259NO PFAM MATCH---
WP_015100717.1 3555880 3557230 + 449PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
1.40E-16
1.70E-09
WP_015100718.1 3557226 3558516 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-43
WP_015100719.1 3558545 3559124 + 192PF00881NitroreductaseNitroreductase family4.90E-16
WP_015100720.1 3559184 3560105 + 306NO PFAM MATCH---
WP_231905306.1 3561315 3560082 - 410PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
2.20E-15
3.00E-08
WP_015100722.1 3562159 3561574 - 194PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
1.80E-32
4.60E-07
WP_015100723.1 3563229 3562155 - 357PF00296Bac_luciferaseLuciferase-like monooxygenase5.10E-59
WP_148302895.1 3563466 3564396 + 309NO PFAM MATCH---
WP_231905307.1 3564657 3565581 + 307PF17186
PF07143
Lipocalin_9
CrtC
Lipocalin-like domain
CrtC N-terminal lipocalin domain
1.30E-13
2.80E-09
WP_231905308.1 3566582 3565721 - 286PF01609
PF13586
DDE_Tnp_1
DDE_Tnp_1_2
Transposase DDE domain
Transposase DDE domain
6.00E-13
1.30E-07

Results for WP_015102789.1 [Saccharothrix espanaensis DSM 44229] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015102781.1 6055319 6054314 - 334PF00005
PF13732
PF13304
ABC_tran
DUF4162
AAA_21
ABC transporter
Domain of unknown function (DUF4162)
AAA domain, putative AbiEii toxin, Type IV TA system
3.90E-27
6.80E-12
1.30E-11
WP_015102782.1 6055738 6055318 - 139NO PFAM MATCH---
WP_015102783.1 6057099 6055851 - 415PF00067p450Cytochrome P4503.70E-16
WP_015102784.1 6059577 6057141 - 811PF14028
PF00881
Lant_dehydr_C
Nitroreductase
Lantibiotic biosynthesis dehydratase C-term
Nitroreductase family
3.30E-25
2.00E-10
WP_158509433.1 6060383 6059573 - 269PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.00E-18
WP_015102786.1 6062820 6060390 - 809PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus7.60E-15
WP_015102787.1 6063152 6062816 - 111PF00881NitroreductaseNitroreductase family3.60E-08
WP_015102788.1 6064245 6063153 - 363PF00881NitroreductaseNitroreductase family3.00E-04
WP_015102789.1 6066059 6064241 - 605PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-83
WP_158509434.1 6068014 6066055 - 652PF00899ThiFThiF family5.50E-04
WP_197540192.1 6068292 6068085 - 68PF19409Thiopep_preThiopeptide-type bacteriocin precursor9.40E-04
WP_015102792.1 6068514 6069081 + 188NO PFAM MATCH---
WP_015102793.1 6069129 6069588 + 152PF00960NeocarzinostatNeocarzinostatin family5.00E-39
WP_015102794.1 6069920 6070217 + 98PF00440TetR_NBacterial regulatory proteins, tetR family2.20E-06
WP_015102795.1 6070235 6070448 + 70NO PFAM MATCH---
WP_015102796.1 6071729 6070724 - 334PF13280
PF08279
PF08220
PF19187
PF02082
WYL
HTH_11
HTH_DeoR
HTH_PafC
Rrf2
WYL domain
HTH domain
DeoR-like helix-turn-helix domain
PafC helix-turn-helix domain
Iron-dependent Transcriptional regulator
1.90E-26
6.20E-14
2.70E-05
4.70E-05
1.40E-04
WP_015102797.1 6071842 6072310 + 155PF06983
PF00903
3-dmu-9_3-mt
Glyoxalase
3-demethylubiquinone-9 3-methyltransferase
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
3.10E-09
2.30E-04

Results for WP_014959693.1 [Desulfobacula toluolica Tol2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014959685.1 5163479 5162258 - 406PF03453
PF00994
MoeA_N
MoCF_biosynth
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
3.30E-33
3.50E-18
WP_014959686.1 5164057 5163523 - 177PF13237
PF12838
PF12837
PF12797
PF00037
Fer4_10
Fer4_7
Fer4_6
Fer4_2
Fer4
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S binding domain
8.80E-06
2.00E-05
3.20E-05
3.30E-04
4.50E-04
WP_014959687.1 5166014 5164043 - 656PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
6.00E-65
1.90E-63
WP_014959688.1 5166525 5166978 + 150PF00126HTH_1Bacterial regulatory helix-turn-helix protein, lysR family6.60E-12
WP_014959689.1 5167529 5167097 - 143PF00126HTH_1Bacterial regulatory helix-turn-helix protein, lysR family6.10E-10
WP_014959690.1 5167696 5168287 + 196PF02663FmdEFmdE, Molybdenum formylmethanofuran dehydrogenase operon4.60E-29
WP_014959691.1 5168321 5169377 + 351PF00994MoCF_biosynthProbable molybdopterin binding domain4.30E-19
WP_014959692.1 5169377 5169893 + 171PF03205MobBMolybdopterin guanine dinucleotide synthesis protein B2.20E-35
WP_014959693.1 5171662 5169931 - 576PF02624
PF00515
PF07719
PF13181
PF13424
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-69
2.30E-23
4.60E-19
3.40E-18
1.70E-13
WP_014959694.1 5172165 5171730 - 144PF03473MOSCMOSC domain8.40E-07
WP_014959695.1 5172619 5173411 + 263PF02548Pantoate_transfKetopantoate hydroxymethyltransferase2.80E-111
WP_014959696.1 5173397 5174288 + 296PF10728
PF10727
PF03807
PF07991
DUF2520
Rossmann-like
F420_oxidored
IlvN
Domain of unknown function (DUF2520)
Rossmann-like domain
NADP oxidoreductase coenzyme F420-dependent
Acetohydroxy acid isomeroreductase, NADPH-binding domain
6.20E-36
5.50E-11
8.90E-07
1.40E-04
WP_014959697.1 5177259 5174277 - 993PF08367
PF05193
PF00675
M16C_assoc
Peptidase_M16_C
Peptidase_M16
Peptidase M16C associated
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
7.00E-69
2.40E-29
3.50E-09
WP_014959698.1 5177638 5177275 - 120PF05597PhasinPoly(hydroxyalcanoate) granule associated protein (phasin)1.60E-04
WP_014959699.1 5178146 5178986 + 279PF00398
PF03602
PF05175
PF13847
PF13649
RrnaAD
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
Ribosomal RNA adenine dimethylase
Conserved hypothetical protein 95
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
3.60E-56
1.50E-06
1.70E-05
1.80E-05
1.90E-05
WP_014959700.1 5178999 5179332 + 110NO PFAM MATCH---
WP_014959701.1 5179502 5180018 + 171PF01584CheWCheW-like domain1.20E-35

Results for WP_007536136.1 [Rhizobium mesoamericanum STM3625] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_040678618.1 331613 334766 + 1050PF00211
PF13191
PF00536
PF13424
PF07647
Guanylate_cyc
AAA_16
SAM_1
TPR_12
SAM_2
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
SAM domain (Sterile alpha motif)
Tetratricopeptide repeat
SAM domain (Sterile alpha motif)
1.60E-21
4.00E-15
2.90E-13
6.20E-09
9.10E-09
WP_007536119.1 335833 334981 - 283PF01729
PF02749
QRPTase_C
QRPTase_N
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
1.60E-60
1.40E-25
WP_007536122.1 337373 335834 - 512PF00890
PF01266
PF02910
PF07992
FAD_binding_2
DAO
Succ_DH_flav_C
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
Pyridine nucleotide-disulphide oxidoreductase
1.80E-84
9.10E-11
1.20E-06
1.30E-05
WP_040678620.1 338341 337369 - 323PF02445NadAQuinolinate synthetase A protein4.30E-112
WP_007536127.1 339312 338409 - 300PF19368AraR_CAraR C-terminal winged HTH domain8.70E-08
WP_007536129.1 339801 340197 + 131PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
8.60E-12
4.30E-07
1.00E-06
WP_007536132.1 340496 340226 - 89NO PFAM MATCH---
WP_007536134.1 341308 340561 - 248PF07812TfuATfuA-like protein2.10E-40
WP_007536136.1 342564 341304 - 419PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.30E-68
WP_007536138.1 344779 342832 - 648PF07719
PF03704
PF13432
PF13428
PF14559
TPR_2
BTAD
TPR_16
TPR_14
TPR_19
Tetratricopeptide repeat
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.00E-10
2.80E-09
5.60E-09
6.60E-08
1.80E-07
WP_007536141.1 346060 345019 - 346PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
1.30E-16
1.20E-15
WP_040678300.1 346552 346753 + 66PF10931DUF2735Protein of unknown function (DUF2735)2.10E-10
WP_007536143.1 346949 348161 + 403PF03486
PF07992
PF01266
PF13450
PF00070
HI0933_like
Pyr_redox_2
DAO
NAD_binding_8
Pyr_redox
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
4.40E-99
7.80E-07
1.90E-06
1.10E-05
4.10E-04
WP_007536146.1 349008 348186 - 273PF02548Pantoate_transfKetopantoate hydroxymethyltransferase6.30E-105
WP_007536147.1 349883 349007 - 291PF02569Pantoate_ligasePantoate-beta-alanine ligase1.10E-101
WP_007536149.1 350184 350850 + 221PF00226DnaJDnaJ domain8.30E-18
WP_007536150.1 351866 350870 - 331PF04280Tim44Tim44-like domain5.60E-27

Results for WP_007535903.1 [Rhizobium mesoamericanum STM3625] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011970955.1 214667 214970 + 101INFERRED GENE---
WP_007535896.1 215960 217529 + 522PF02690Na_Pi_cotransNa+/Pi-cotransporter5.60E-45
WP_007535897.1 218158 217705 - 150PF00582UspUniversal stress protein family8.10E-30
WP_040678598.1 218777 218453 - 107PF20370DUF6665Family of unknown function (DUF6665)1.50E-16
WP_007535899.1 219737 219452 - 94PF06823DUF1236Protein of unknown function (DUF1236)1.30E-18
WP_040678599.1 221129 219818 - 436PF01595
PF03471
PF00571
CNNM
CorC_HlyC
CBS
Cyclin M transmembrane N-terminal domain
Transporter associated domain
CBS domain
3.70E-47
1.10E-22
2.20E-11
WP_007535901.1 221916 221334 - 193PF09335SNARE_assocSNARE associated Golgi protein4.70E-15
WP_007535902.1 222136 225211 + 1024PF13191
PF00211
PF13401
AAA_16
Guanylate_cyc
AAA_22
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
9.80E-18
5.40E-08
2.80E-04
WP_007535903.1 225194 226406 + 403PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-48
WP_007535904.1 226416 227172 + 251PF07812TfuATfuA-like protein2.00E-44
WP_007535905.1 227212 228391 + 392NO PFAM MATCH---
WP_007535906.1 228413 229004 + 196NO PFAM MATCH---
WP_007535907.1 229913 229400 - 170NO PFAM MATCH---
WP_017991464.1 230350 230569 + 73INFERRED GENE---
WP_007535911.1 230790 231051 + 86PF07704PSK_trans_facRv0623-like transcription factor3.40E-24
WP_003403236.1 231044 231430 + 128INFERRED GENE---
WP_018857951.1 231579 231800 + 73INFERRED GENE---

Results for WP_008531737.1 [Rhizobium sp. Pop5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008531724.1 114203 115211 + 335PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
6.20E-27
2.80E-13
WP_008531725.1 115212 116349 + 378PF00528
PF12911
BPD_transp_1
OppC_N
Binding-protein-dependent transport system inner membrane component
N-terminal TM domain of oligopeptide transport permease C
4.40E-18
1.30E-12
WP_008531726.1 116359 118027 + 555PF00005
PF02463
PF13304
PF13191
PF13401
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
1.10E-61
9.30E-17
1.60E-13
1.20E-08
2.60E-08
WP_008531727.1 118049 119420 + 456PF02056
PF11975
Glyco_hydro_4
Glyco_hydro_4C
Family 4 glycosyl hydrolase
Family 4 glycosyl hydrolase C-terminal domain
3.70E-67
5.20E-64
WP_008531728.1 119834 119543 - 96NO PFAM MATCH---
WP_008531729.1 120335 119855 - 159NO PFAM MATCH---
WP_258156821.1 121576 120355 - 406NO PFAM MATCH---
WP_008531736.1 122383 121618 - 254PF07812TfuATfuA-like protein9.10E-41
WP_008531737.1 123524 122375 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-42
WP_258156822.1 126530 123539 - 996PF00211
PF13191
PF13424
PF13401
Guanylate_cyc
AAA_16
TPR_12
AAA_22
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
Tetratricopeptide repeat
AAA domain
1.70E-21
5.80E-19
1.80E-06
8.60E-04
WP_008531742.1 127273 126838 - 144NO PFAM MATCH---
WP_008531744.1 127476 128373 + 298PF00990
PF12860
GGDEF
PAS_7
Diguanylate cyclase, GGDEF domain
PAS fold
4.70E-39
7.90E-04
WP_008531745.1 128722 128422 - 99NO PFAM MATCH---
WP_258156823.1 128951 131048 + 698PF17804
PF03572
PF11818
PF00595
PF17820
TSP_NTD
Peptidase_S41
DUF3340
PDZ
PDZ_6
Tail specific protease N-terminal domain
Peptidase family S41
C-terminal domain of tail specific protease (DUF3340)
PDZ domain
PDZ domain
1.20E-58
3.10E-50
9.20E-33
3.50E-12
1.90E-05
WP_258156824.1 133334 131090 - 747PF00563
PF00990
PF03924
EAL
GGDEF
CHASE
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE domain
5.40E-61
2.90E-35
5.30E-19
WP_008531754.1 134206 133480 - 241PF10881DUF2726Protein of unknown function (DUF2726)3.70E-23
WP_037173523.1 135198 134385 - 270PF00005
PF13401
PF13191
ABC_tran
AAA_22
AAA_16
ABC transporter
AAA domain
AAA ATPase domain
1.90E-26
2.80E-04
5.80E-04

Results for WP_008531493.1 [Rhizobium sp. Pop5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008531481.1 374549 371969 - 859PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
6.30E-32
2.80E-28
WP_008531482.1 376073 374795 - 425PF13378
PF07476
PF02746
MR_MLE_C
MAAL_C
MR_MLE_N
Enolase C-terminal domain-like
Methylaspartate ammonia-lyase C-terminus
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
6.70E-60
1.80E-04
2.10E-04
WP_258156779.1 376929 376194 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
4.80E-56
4.70E-43
1.60E-06
1.80E-04
WP_008531487.1 377325 378117 + 263PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
6.40E-13
2.60E-11
3.90E-08
1.70E-06
5.70E-05
WP_008531489.1 378186 379023 + 278PF04909Amidohydro_2Amidohydrolase3.80E-40
WP_008531490.1 379279 379684 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.50E-07
3.30E-06
WP_008531491.1 380012 379745 - 88NO PFAM MATCH---
WP_008531492.1 380825 380078 - 248PF07812TfuATfuA-like protein1.80E-39
WP_008531493.1 382084 380821 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-67
WP_008531494.1 382240 382096 - 47NO PFAM MATCH---
WP_258156780.1 384297 382344 - 650PF03704
PF14559
PF00515
PF07719
PF13432
BTAD
TPR_19
TPR_1
TPR_2
TPR_16
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.00E-12
1.70E-11
5.80E-10
6.70E-10
2.30E-08
WP_258156781.1 385466 384566 - 299PF01729
PF02749
PF13533
QRPTase_C
QRPTase_N
Biotin_lipoyl_2
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
Biotin-lipoyl like
2.00E-60
7.00E-28
8.20E-04
WP_258156782.1 387009 385467 - 513PF00890
PF01266
PF00732
PF02910
PF07992
FAD_binding_2
DAO
GMC_oxred_N
Succ_DH_flav_C
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
GMC oxidoreductase
Fumarate reductase flavoprotein C-term
Pyridine nucleotide-disulphide oxidoreductase
8.30E-81
1.40E-07
2.10E-05
3.20E-05
1.50E-04
WP_258156783.1 387977 387005 - 323PF02445NadAQuinolinate synthetase A protein2.90E-112
WP_008531510.1 388943 388046 - 298PF19368AraR_CAraR C-terminal winged HTH domain3.80E-07
WP_008531512.1 389881 389074 - 268PF02548Pantoate_transfKetopantoate hydroxymethyltransferase3.00E-43
WP_258156784.1 391134 389907 - 408PF07992
PF14759
PF00070
PF01266
PF13738
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
1.70E-65
1.40E-19
3.40E-18
4.00E-07
2.30E-06

Results for WP_005346164.1 [Aeromonas veronii AMC34] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005346147.1 3459255 3460641 + 461PF00939
PF03600
Na_sulph_symp
CitMHS
Sodium:sulfate symporter transmembrane region
Citrate transporter
3.60E-51
1.00E-32
WP_005333609.1 3463488 3461013 - 824PF00343PhosphorylaseCarbohydrate phosphorylase0.00E+00
WP_005333612.1 3464061 3463863 - 65PF14056DUF4250Domain of unknown function (DUF4250)6.60E-20
WP_005346151.1 3464291 3464777 + 161NO PFAM MATCH---
WP_269726622.1 3464907 3465033 + 41NO PFAM MATCH---
WP_005346158.1 3465241 3465676 + 144PF03692CxxCxxCCPutative zinc- or iron-chelating domain5.90E-09
WP_005346160.1 3468615 3466332 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.90E-202
4.70E-43
WP_005346162.1 3469510 3468661 - 282PF01226Form_Nir_transFormate/nitrite transporter9.90E-74
WP_005346164.1 3471652 3469891 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-77
8.10E-65
WP_005346166.1 3473279 3471845 - 477PF00232Glyco_hydro_1Glycosyl hydrolase family 12.30E-172
WP_005346170.1 3473445 3474309 + 287PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-29
2.20E-16
WP_005346175.1 3475095 3474345 - 249PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 32.90E-20
WP_005346178.1 3477536 3475271 - 754PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
4.90E-157
2.30E-127
WP_005346180.1 3477816 3478722 + 301PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-39
1.20E-16
WP_005346181.1 3479611 3478729 - 293PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
1.70E-35
1.00E-22
7.80E-04
WP_005346182.1 3479712 3480351 + 212PF13460
PF05368
PF01370
PF03435
PF01073
NAD_binding_10
NmrA
Epimerase
Sacchrp_dh_NADP
3Beta_HSD
NAD(P)H-binding
NmrA-like family
NAD dependent epimerase/dehydratase family
Saccharopine dehydrogenase NADP binding domain
3-beta hydroxysteroid dehydrogenase/isomerase family
1.70E-28
5.10E-10
1.80E-07
1.90E-07
7.80E-04
WP_005346183.1 3480795 3481839 + 347PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.20E-32
1.10E-19

Results for WP_005300249.1 [Aeromonas dhakensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010634172.1 27146 28242 + 365INFERRED GENE---
WP_005300235.1 29531 28511 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
5.50E-29
7.90E-20
6.70E-16
8.20E-14
WP_005300236.1 30358 29650 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.60E-34
1.60E-19
WP_005300238.1 30611 31754 + 380PF00266Aminotran_5Aminotransferase class-V2.30E-23
WP_005300241.1 31750 33175 + 474PF00202Aminotran_3Aminotransferase class-III1.20E-76
WP_005300242.1 33167 34007 + 279PF00702
PF12710
Hydrolase
HAD
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.50E-05
4.40E-04
WP_005300244.1 36413 34130 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.30E-202
4.70E-43
WP_005300246.1 37303 36454 - 282PF01226Form_Nir_transFormate/nitrite transporter5.00E-74
WP_005300249.1 39445 37684 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.00E-78
4.90E-65
WP_005300250.1 39887 39572 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein3.10E-29
WP_005300252.1 40226 41342 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
9.00E-59
5.80E-23
WP_017409611.1 41911 44688 + 925INFERRED GENE---
WP_005300257.1 45945 44781 - 387PF01053
PF00155
PF00266
PF03841
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
SelA
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
Aminotransferase class-V
L-seryl-tRNA selenium transferase
1.00E-134
2.80E-07
6.50E-05
1.80E-04
WP_005300259.1 47109 46038 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.80E-33
1.20E-18
WP_005300260.1 48226 47587 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
9.90E-27
2.30E-09
2.90E-07
8.60E-07
3.20E-04
WP_019838690.1 48327 49234 + 302INFERRED GENE---
WP_005300264.1 50105 49364 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
3.40E-57
2.90E-55
2.30E-19
2.90E-08
3.80E-05

Results for WP_005721911.1 [Lactobacillus crispatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_261976150.1 245 527 + 93NO PFAM MATCH---
WP_005721911.1 507 1824 + 438PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-27
WP_005729760.1 1801 2389 + 195PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.20E-06
WP_005723591.1 3835 2938 - 298PF03217
PF00188
SlpA
CAP
Surface layer protein A domain
Cysteine-rich secretory protein family
2.10E-13
1.40E-10
WP_005721068.1 4873 3856 - 338PF03217
PF00188
SlpA
CAP
Surface layer protein A domain
Cysteine-rich secretory protein family
9.40E-17
1.20E-10

Results for WP_008484855.1 [Gallaecimonas xiamenensis 3-C-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008484841.1 33604 34372 + 255PF04224DUF417Protein of unknown function, DUF4173.00E-16
WP_035481929.1 34820 34340 - 159PF12802
PF01047
PF13463
PF01978
PF13601
MarR_2
MarR
HTH_27
TrmB
HTH_34
MarR family
MarR family
Winged helix DNA-binding domain
Sugar-specific transcriptional regulator TrmB
Winged helix DNA-binding domain
8.20E-17
9.50E-15
3.40E-10
1.30E-04
4.50E-04
WP_008484844.1 34919 35777 + 285PF00892EamAEamA-like transporter family1.50E-33
WP_008484846.1 37467 35838 - 542PF00884
PF08019
Sulfatase
EptA_B_N
Sulfatase
Phosphoethanolamine transferase EptA/EptB
4.40E-44
2.90E-32
WP_008484848.1 38320 37555 - 254PF00557Peptidase_M24Metallopeptidase family M244.60E-52
WP_035481933.1 38504 38300 - 67PF11903ParD_likeParD-like antitoxin of type II bacterial toxin-antitoxin system1.60E-22
WP_008484853.1 38601 39057 + 151PF02639DUF188Uncharacterized BCR, YaiI/YqxD family COG16715.40E-50
WP_008484854.1 39118 39895 + 258NO PFAM MATCH---
WP_008484855.1 41650 39925 - 574PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.10E-72
3.40E-29
WP_008484856.1 43027 41701 - 441PF00158
PF14532
PF00072
PF02954
PF07728
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Sigma-54 interaction domain
Sigma-54 interaction domain
Response regulator receiver domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
1.50E-68
5.10E-28
1.40E-22
3.30E-10
2.70E-07
WP_192813370.1 44472 43023 - 482PF02518
PF00512
PF13581
PF00672
PF14827
HATPase_c
HisKA
HATPase_c_2
HAMP
dCache_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
HAMP domain
Double sensory domain of two-component sensor kinase
6.00E-12
2.40E-08
2.10E-06
3.00E-06
1.00E-05
WP_008484858.1 44646 45000 + 117PF13767DUF4168Domain of unknown function (DUF4168)3.00E-19
WP_051012914.1 45945 45039 - 301PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family5.10E-24
WP_008484861.1 46364 49508 + 1047PF13620
PF00593
PF07715
CarboxypepD_reg
TonB_dep_Rec
Plug
Carboxypeptidase regulatory-like domain
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.50E-15
4.80E-04
9.70E-04
WP_008484862.1 50831 49616 - 404PF01663
PF00884
Phosphodiest
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
Sulfatase
8.60E-74
3.10E-04
WP_008484863.1 51698 50927 - 256PF12833
PF00165
PF02311
HTH_18
HTH_AraC
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-like ligand binding domain
1.70E-19
3.60E-18
1.00E-05
WP_008484864.1 51768 52047 + 92NO PFAM MATCH---

Results for WP_008487055.1 [Idiomarina xiamenensis 10-D-4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008487045.1 123462 125352 + 629NO PFAM MATCH---
WP_008487046.1 125468 127628 + 719PF10459
PF13365
PF00089
Peptidase_S46
Trypsin_2
Trypsin
Peptidase S46
Trypsin-like peptidase domain
Trypsin
3.30E-255
6.70E-08
1.60E-04
WP_008487047.1 128001 128223 + 73PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.40E-14
WP_156812051.1 128264 129032 + 255PF00005
PF13304
PF02463
PF13175
PF13479
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_24
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
1.60E-32
2.60E-15
2.00E-07
2.40E-07
4.30E-07
WP_008487051.1 129034 129790 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.50E-20
6.20E-10
WP_008487052.1 129847 132625 + 925PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.00E-28
WP_008487053.1 132627 133785 + 385PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.10E-13
WP_008487054.1 133777 135640 + 620NO PFAM MATCH---
WP_008487055.1 135636 137613 + 658PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-75
WP_008487057.1 137620 137854 + 77NO PFAM MATCH---
WP_008487059.1 137883 139116 + 410PF00881NitroreductaseNitroreductase family2.90E-04
WP_008487060.1 139112 140060 + 315PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.30E-49
WP_008487061.1 140067 141228 + 386PF02687FtsXFtsX-like permease family1.70E-18
WP_008487062.1 141220 142399 + 392PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.40E-15
1.30E-11
WP_008487063.1 142404 143511 + 368PF16576
PF13437
PF13533
PF00529
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
2.20E-26
5.90E-16
6.90E-09
4.00E-04
WP_008487064.1 143507 144185 + 225PF00005
PF13304
PF02463
PF03193
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
RsgA GTPase
3.90E-30
2.00E-07
4.40E-06
3.20E-04
WP_008487065.1 144214 144646 + 143PF09912DUF2141Uncharacterized protein conserved in bacteria (DUF2141)3.40E-28

Results for WP_008487038.1 [Idiomarina xiamenensis 10-D-4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_192811493.1 107923 107425 - 165PF01527HTH_Tnp_1Transposase7.40E-07
WP_008487030.1 108125 108533 + 135NO PFAM MATCH---
WP_008487031.1 109462 108976 - 161PF00782DSPcDual specificity phosphatase, catalytic domain6.30E-09
WP_008487032.1 110081 109652 - 142NO PFAM MATCH---
WP_008487034.1 110240 111209 + 322NO PFAM MATCH---
WP_008487035.1 111301 113353 + 683PF00015
PF02743
PF00672
MCPsignal
dCache_1
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
2.40E-40
1.40E-21
7.30E-17
WP_008487036.1 114030 113445 - 194PF13505OMP_b-brlOuter membrane protein beta-barrel domain8.30E-17
WP_008487037.1 115096 114157 - 312PF12146
PF00561
Hydrolase_4
Abhydrolase_1
Serine aminopeptidase, S33
alpha/beta hydrolase fold
8.90E-06
3.40E-04
WP_008487038.1 117365 115160 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.40E-73
1.20E-70
4.00E-08
WP_008487039.1 119150 117458 - 563PF00005
PF00664
PF03193
PF13191
ABC_tran
ABC_membrane
RsgA_GTPase
AAA_16
ABC transporter
ABC transporter transmembrane region
RsgA GTPase
AAA ATPase domain
3.60E-23
1.30E-09
7.70E-04
8.60E-04
WP_008487040.1 120786 119142 - 547PF00005
PF00664
PF13304
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_21
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
4.90E-20
1.30E-15
3.40E-10
6.70E-09
9.40E-06
WP_008487042.1 121818 120810 - 335PF02322Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II6.40E-96
WP_008487044.1 123212 121829 - 460PF01654Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I2.30E-150
WP_008487045.1 123462 125352 + 629NO PFAM MATCH---
WP_008487046.1 125468 127628 + 719PF10459
PF13365
PF00089
Peptidase_S46
Trypsin_2
Trypsin
Peptidase S46
Trypsin-like peptidase domain
Trypsin
3.30E-255
6.70E-08
1.60E-04
WP_008487047.1 128001 128223 + 73PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.40E-14
WP_156812051.1 128264 129032 + 255PF00005
PF13304
PF02463
PF13175
PF13479
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_24
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
1.60E-32
2.60E-15
2.00E-07
2.40E-07
4.30E-07

Results for WP_004030685.1 [Methanobacterium formicicum DSM 3637] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048204142.1 118993 118663 - 109PF05239PRCPRC-barrel domain4.10E-12
WP_004030678.1 119491 120214 + 240PF18489
PF01588
Alpha_Helical
tRNA_bind
Alpha helical domain
Putative tRNA binding domain
1.00E-55
4.30E-14
WP_004030679.1 121882 120475 - 468PF00171AldedhAldehyde dehydrogenase family1.30E-160
WP_004030680.1 122264 122045 - 72PF04021Class_IIIsignalClass III signal peptide1.00E-04
WP_004030681.1 123215 122279 - 311PF00482T2SSFType II secretion system (T2SS), protein F3.50E-22
WP_004030682.1 124384 123379 - 334PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
8.10E-56
1.40E-13
WP_004030683.1 125007 124536 - 156PF01230HITHIT domain4.30E-05
WP_004030684.1 125228 125825 + 198PF02163Peptidase_M50Peptidase family M507.20E-08
WP_004030685.1 125937 127131 + 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-95
WP_004030686.1 127395 127737 + 113PF01981PTH2Peptidyl-tRNA hydrolase PTH21.20E-39
WP_004030687.1 127889 128534 + 214PF00696AA_kinaseAmino acid kinase family9.40E-17
WP_004030688.1 128534 128696 + 53PF07754HVO_2753_ZBPSmall zinc finger protein HVO_2753-like, Zn-binding pocket2.30E-13
WP_004030689.1 128987 129257 + 89PF00736EF1_GNEEF-1 guanine nucleotide exchange domain1.00E-21
WP_004030690.1 129642 130890 + 415PF01970TctATripartite tricarboxylate transporter TctA family3.90E-69
WP_004030691.1 131891 130907 - 327PF06325
PF03602
PrmA
Cons_hypoth95
Ribosomal protein L11 methyltransferase (PrmA)
Conserved hypothetical protein 95
2.50E-06
4.90E-04
WP_004030692.1 132015 133644 + 542PF00437T2SSEType II/IV secretion system protein7.00E-59
WP_004030693.1 133816 134935 + 372PF00482
PF09972
PF20237
T2SSF
DUF2207
DUF6594
Type II secretion system (T2SS), protein F
Predicted membrane protein (DUF2207)
Family of unknown function (DUF6594)
3.10E-23
1.20E-08
1.70E-04

Results for WP_015657123.1 [Streptomyces davaonensis JCM 4913] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015657115.1 2625805 2625274 - 176NO PFAM MATCH---
WP_015657116.1 2626770 2625801 - 322PF11583AurFP-aminobenzoate N-oxygenase AurF3.00E-39
WP_015657117.1 2627861 2626820 - 346PF00891
PF16864
PF09339
PF02082
PF13545
Methyltransf_2
Dimerisation2
HTH_IclR
Rrf2
HTH_Crp_2
O-methyltransferase domain
Dimerisation domain
IclR helix-turn-helix domain
Iron-dependent Transcriptional regulator
Crp-like helix-turn-helix domain
1.40E-41
2.00E-09
1.40E-04
4.30E-04
5.30E-04
WP_015657118.1 2629105 2627863 - 413PF00067p450Cytochrome P4508.80E-25
WP_041819110.1 2629388 2630084 + 231PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
2.10E-17
3.30E-13
6.30E-07
WP_015657120.1 2631308 2630135 - 390PF01494
PF01266
PF04820
PF12831
FAD_binding_3
DAO
Trp_halogenase
FAD_oxidored
FAD binding domain
FAD dependent oxidoreductase
Tryptophan halogenase
FAD dependent oxidoreductase
7.90E-22
5.70E-09
1.60E-06
2.10E-05
WP_015657121.1 2632841 2631329 - 503PF00881NitroreductaseNitroreductase family4.90E-15
WP_015657122.1 2634642 2633046 - 531PF00881NitroreductaseNitroreductase family3.40E-10
WP_015657123.1 2636651 2634653 - 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-78
WP_015657124.1 2638509 2636643 - 621NO PFAM MATCH---
WP_015657125.1 2639818 2638678 - 379PF04101
PF00201
Glyco_tran_28_C
UDPGT
Glycosyltransferase family 28 C-terminal domain
UDP-glucoronosyl and UDP-glucosyl transferase
5.50E-06
1.10E-04
WP_015657126.1 2640784 2639821 - 320PF16363
PF01370
PF01073
PF04321
PF02719
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
RmlD substrate binding domain
Polysaccharide biosynthesis protein
1.00E-72
1.70E-62
1.20E-16
1.80E-15
7.10E-15
WP_015657127.1 2641848 2640780 - 355PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
2.40E-47
6.00E-11
WP_015657128.1 2642709 2641872 - 278PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.10E-21
4.80E-10
WP_015657129.1 2643707 2642705 - 333PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
6.00E-25
4.50E-09
2.70E-05
WP_015657130.1 2644985 2643743 - 413PF00067p450Cytochrome P4507.30E-31
WP_015657131.1 2646208 2644981 - 408PF00201
PF04101
PF03033
PF13439
UDPGT
Glyco_tran_28_C
Glyco_transf_28
Glyco_transf_4
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
Glycosyltransferase family 28 N-terminal domain
Glycosyltransferase Family 4
3.60E-16
3.80E-12
6.60E-05
5.60E-04

Results for WP_015663091.1 [Streptomyces davaonensis JCM 4913] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015663085.1 9352800 9354357 + 518PF00144
PF11954
Beta-lactamase
DUF3471
Beta-lactamase
Domain of unknown function (DUF3471)
7.40E-57
2.00E-08
WP_231905551.1 9356081 9354449 - 543PF13751
PF05598
PF01609
DDE_Tnp_1_6
DUF772
DDE_Tnp_1
Transposase DDE domain
Transposase domain (DUF772)
Transposase DDE domain
1.10E-28
2.40E-18
1.40E-11
WP_041818680.1 9356317 9357550 + 410PF13006
PF01609
Nterm_IS4
DDE_Tnp_1
Insertion element 4 transposase N-terminal
Transposase DDE domain
1.50E-36
1.00E-18
WP_106435975.1 9357842 9359498 + 551PF13751
PF05598
PF01609
DDE_Tnp_1_6
DUF772
DDE_Tnp_1
Transposase DDE domain
Transposase domain (DUF772)
Transposase DDE domain
2.50E-26
1.80E-18
1.50E-06
WP_015663086.1 9359602 9359959 + 118NO PFAM MATCH---
WP_086558177.1 9359948 9360770 + 274INFERRED GENE---
WP_015663089.1 9361044 9362379 + 444PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
8.60E-24
5.90E-22
WP_015663090.1 9363677 9362288 - 462PF07812TfuATfuA-like protein7.50E-39
WP_015663091.1 9364876 9363673 - 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-61
WP_015663092.1 9365129 9364973 - 51NO PFAM MATCH---
WP_015663093.1 9365782 9365161 - 206NO PFAM MATCH---
WP_015663094.1 9366420 9365781 - 212NO PFAM MATCH---
WP_015663095.1 9366613 9367942 + 442PF13560
PF01381
PF13443
PF04545
HTH_31
HTH_3
HTH_26
Sigma70_r4
Helix-turn-helix domain
Helix-turn-helix
Cro/C1-type HTH DNA-binding domain
Sigma-70, region 4
8.90E-12
1.00E-06
1.10E-05
9.70E-04
WP_015663096.1 9368630 9368399 - 76NO PFAM MATCH---
WP_041820515.1 9369156 9370542 + 461NO PFAM MATCH---
WP_010639982.1 9370538 9370736 + 65NO PFAM MATCH---
WP_015663098.1 9370772 9370955 + 60NO PFAM MATCH---

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003329453.1 [Schinkia azotoformans LMG 9581] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003329445.1 9324 9024 - 99PF14168
PF20606
YjzC
DUF6799
YjzC-like protein
Domain of unknown function (DUF6799)
1.10E-08
2.00E-05
WP_003329446.1 9599 10832 + 410PF13641
PF00535
PF13632
PF13506
PF13704
Glyco_tranf_2_3
Glycos_transf_2
Glyco_trans_2_3
Glyco_transf_21
Glyco_tranf_2_4
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
Glycosyl transferase family 2
9.50E-36
2.10E-30
4.80E-20
5.00E-14
1.20E-06
WP_157382039.1 10795 11239 + 147NO PFAM MATCH---
WP_003329448.1 11250 12099 + 282PF01522Polysacc_deac_1Polysaccharide deacetylase2.40E-24
WP_003329449.1 12487 13075 + 195PF12822
PF07155
PF07694
ECF_trnsprt
ECF-ribofla_trS
5TM-5TMR_LYT
ECF transporter, substrate-specific component
ECF-type riboflavin transporter, S component
5TMR of 5TMR-LYT
5.10E-23
1.50E-08
1.80E-06
WP_017149309.1 13080 13305 + 75INFERRED GENE---
WP_003329450.1 13562 13814 + 83NO PFAM MATCH---
WP_003329452.1 13966 15928 + 653NO PFAM MATCH---
WP_003329453.1 15927 17868 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-82
WP_003329454.1 17891 19475 + 527PF00881NitroreductaseNitroreductase family8.00E-12
WP_003329455.1 19924 19588 - 111PF03734YkuDL,D-transpeptidase catalytic domain1.80E-23

Results for WP_005549760.1 [Paenibacillus alvei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005549746.1 35008 34096 - 303PF02567PhzC-PhzFPhenazine biosynthesis-like protein1.20E-71
WP_005549747.1 35583 35160 - 140NO PFAM MATCH---
WP_005549748.1 35814 36414 + 199PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
5.70E-17
4.10E-11
WP_005549750.1 36950 36539 - 136PF07843DUF1634Protein of unknown function (DUF1634)1.10E-31
WP_202950514.1 37785 36942 - 280PF01925TauESulfite exporter TauE/SafE8.80E-50
WP_005549754.1 37933 38389 + 151PF13404
PF13412
PF01037
PF01047
PF08279
HTH_AsnC-type
HTH_24
AsnC_trans_reg
MarR
HTH_11
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
MarR family
HTH domain
1.40E-15
2.70E-14
4.80E-08
7.20E-07
1.60E-04
WP_005549756.1 39061 38563 - 165PF00583Acetyltransf_1Acetyltransferase (GNAT) family3.40E-08
WP_262866817.1 39699 39138 - 186PF01966HDHD domain4.40E-09
WP_005549760.1 41992 40045 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-78
WP_005549761.1 43506 41988 - 505NO PFAM MATCH---
WP_005549762.1 44595 43860 - 244NO PFAM MATCH---
WP_005549763.1 45125 44660 - 154PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily9.20E-10
WP_005549764.1 45781 45220 - 186PF18014Acetyltransf_18Acetyltransferase (GNAT) domain2.00E-33
WP_005549765.1 46086 45774 - 103PF00583
PF13673
Acetyltransf_1
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
2.10E-05
8.40E-04
WP_005549766.1 46785 46218 - 188PF13302
PF00583
PF13420
PF13523
Acetyltransf_3
Acetyltransf_1
Acetyltransf_4
Acetyltransf_8
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.50E-11
1.10E-06
3.20E-06
2.20E-05
WP_157267072.1 47003 46838 - 54NO PFAM MATCH---
WP_005549770.1 47545 47071 - 157PF00583
PF13673
PF13302
PF13420
PF13508
Acetyltransf_1
Acetyltransf_10
Acetyltransf_3
Acetyltransf_4
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.70E-11
7.80E-11
7.60E-10
5.50E-07
6.10E-06

Results for WP_007087427.1 [Neobacillus bataviensis LMG 21833] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007087419.1 112685 111479 - 401PF02568
PF02926
PF06508
ThiI
THUMP
QueC
Thiamine biosynthesis protein (ThiI)
THUMP domain
Queuosine biosynthesis protein QueC
1.80E-64
1.20E-18
5.60E-08
WP_007087420.1 113828 112685 - 380PF00266
PF01041
PF01212
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Beta-eliminating lyase
6.50E-80
6.00E-06
7.00E-06
WP_007087421.1 115616 113927 - 562PF06160EzrASeptation ring formation regulator, EzrA3.20E-177
WP_007087422.1 116408 115775 - 210PF00440TetR_NBacterial regulatory proteins, tetR family2.20E-12
WP_007087423.1 116553 117036 + 160PF13185
PF01590
GAF_2
GAF
GAF domain
GAF domain
3.60E-10
2.80E-08
WP_007087424.1 118529 117113 - 471PF00990
PF13185
PF13492
PF01590
GGDEF
GAF_2
GAF_3
GAF
Diguanylate cyclase, GGDEF domain
GAF domain
GAF domain
GAF domain
1.00E-43
1.90E-08
1.70E-06
2.60E-06
WP_007087425.1 118899 119502 + 200PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
6.30E-31
1.80E-19
WP_007087426.1 121267 119680 - 528PF00881NitroreductaseNitroreductase family1.00E-14
WP_007087427.1 123227 121289 - 645PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-85
WP_007087428.1 125173 123226 - 648NO PFAM MATCH---
WP_007087429.1 125493 125199 - 97NO PFAM MATCH---
WP_007087430.1 127295 126038 - 418PF00579
PF01479
tRNA-synt_1b
S4
tRNA synthetases class I (W and Y)
S4 domain
2.70E-87
2.00E-11
WP_007087431.1 127705 130477 + 923PF00912
PF00905
Transgly
Transpeptidase
Transglycosylase
Penicillin binding protein transpeptidase domain
2.80E-54
3.70E-26
WP_007087432.1 132244 130525 - 572PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.70E-92
2.70E-26
WP_007087433.1 132443 133076 + 210PF00583Acetyltransf_1Acetyltransferase (GNAT) family8.40E-05
WP_007087434.1 133116 133764 + 215PF00571
PF01842
PF13291
CBS
ACT
ACT_4
CBS domain
ACT domain
ACT domain
5.90E-23
1.20E-10
2.00E-06
WP_007087435.1 133760 134933 + 390PF00850Hist_deacetylHistone deacetylase domain2.50E-81

Results for WP_006501818.1 [Austwickia chelonae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003112328.1 721289 721526 + 79INFERRED GENE---
BMW40_RS16625 721736 722705 + 323INFERRED GENE---
WP_006501812.1 722948 724841 + 630PF01019G_glu_transpeptGamma-glutamyltranspeptidase1.20E-134
WP_006501813.1 726935 724856 - 692PF00326
PF12146
Peptidase_S9
Hydrolase_4
Prolyl oligopeptidase family
Serine aminopeptidase, S33
3.60E-18
1.80E-07
WP_006501814.1 728193 726936 - 418NO PFAM MATCH---
WP_245706851.1 728311 728419 + 35NO PFAM MATCH---
WP_006501816.1 728523 729249 + 241NO PFAM MATCH---
WP_006501817.1 729245 730436 + 396PF02129
PF07859
Peptidase_S15
Abhydrolase_3
X-Pro dipeptidyl-peptidase (S15 family)
alpha/beta hydrolase fold
2.90E-08
3.10E-04
WP_006501818.1 730432 731800 + 455PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-36
WP_006501819.1 731853 733200 + 448NO PFAM MATCH---
WP_006501820.1 733222 734890 + 555PF00005
PF02463
PF13304
PF00664
PF13555
ABC_tran
SMC_N
AAA_21
ABC_membrane
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter transmembrane region
P-loop containing region of AAA domain
5.40E-25
4.80E-07
2.00E-06
1.30E-05
5.50E-05
BMW40_RS16635 735294 735681 + 129INFERRED GENE---
BMW40_RS16640 736020 736377 + 119INFERRED GENE---
WP_074788495.1 736745 737462 + 238PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.80E-17
WP_006501823.1 738642 737643 - 332PF01497Peripla_BP_2Periplasmic binding protein4.50E-22
WP_006501824.1 739514 738674 - 279PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
6.60E-33
8.40E-10
5.10E-06
6.20E-04
WP_006501825.1 740575 739510 - 354PF01032FecCDFecCD transport family2.60E-91

Results for WP_015080056.1 [Anabaena sp. 90] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015080048.1 2404613 2403614 - 332PF01520
PF01471
PF09374
Amidase_3
PG_binding_1
PG_binding_3
N-acetylmuramoyl-L-alanine amidase
Putative peptidoglycan binding domain
Predicted Peptidoglycan domain
5.60E-34
1.10E-22
9.40E-04
WP_015080049.1 2404777 2408470 + 1230PF02514
PF11965
CobN-Mg_chel
DUF3479
CobN/Magnesium Chelatase
Domain of unknown function (DUF3479)
0.00E+00
4.00E-52
WP_015080050.1 2409689 2408483 - 401PF12704
PF02687
MacB_PCD
FtsX
MacB-like periplasmic core domain
FtsX-like permease family
3.40E-33
1.70E-18
WP_015080051.1 2411149 2409826 - 440PF16576
PF13437
PF13533
PF00529
PF12700
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
HlyD_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
HlyD family secretion protein
6.20E-18
7.20E-14
1.40E-10
8.40E-08
3.70E-05
WP_015080052.1 2413058 2411246 - 603PF00005
PF13304
PF02463
PF09818
ABC_tran
AAA_21
SMC_N
ABC_ATPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
3.60E-34
2.00E-07
6.70E-05
1.10E-04
WP_041457948.1 2414038 2414395 + 118NO PFAM MATCH---
WP_015080054.1 2414493 2415627 + 377PF00899ThiFThiF family2.70E-20
WP_015080055.1 2415885 2417004 + 372PF01385
PF07282
PF12323
OrfB_IS605
OrfB_Zn_ribbon
HTH_OrfB_IS605
Probable transposase
Putative transposase DNA-binding domain
Helix-turn-helix domain
1.10E-25
3.50E-22
3.50E-08
WP_015080056.1 2417207 2418518 + 436PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-75
WP_015080057.1 2418900 2419629 + 242PF00881NitroreductaseNitroreductase family6.70E-21
WP_015080058.1 2419912 2421928 + 671PF02638
PF00395
GHL10
SLH
Glycosyl hydrolase-like 10
S-layer homology domain
7.40E-71
4.10E-28
WP_015080059.1 2422278 2422701 + 140PF14815
PF00293
NUDIX_4
NUDIX
NUDIX domain
NUDIX domain
2.30E-24
7.40E-17
WP_158310521.1 2422940 2422778 - 53PF15777Anti-TRAPTryptophan RNA-binding attenuator protein inhibitory protein8.40E-06
WP_148279043.1 2423689 2423110 - 192NO PFAM MATCH---
WP_015080061.1 2424833 2423822 - 336PF00652
PF01551
PF03498
PF14200
Ricin_B_lectin
Peptidase_M23
CDtoxinA
RicinB_lectin_2
Ricin-type beta-trefoil lectin domain
Peptidase family M23
Cytolethal distending toxin A/C domain
Ricin-type beta-trefoil lectin domain-like
3.60E-12
1.60E-09
2.30E-08
3.80E-06
WP_015080062.1 2425022 2427404 + 793PF13424
PF00515
PF07719
PF13181
PF13374
TPR_12
TPR_1
TPR_2
TPR_8
TPR_10
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
7.60E-17
3.40E-15
3.50E-11
1.70E-10
4.20E-09
WP_015080063.1 2427664 2428123 + 152PF00571CBSCBS domain5.10E-38

Results for WP_015086495.1 [Helicobacter pylori Aklavik117] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015086492.1 18787 0 - 251PF01061ABC2_membraneABC-2 type transporter1.50E-09
WP_015085727.1 1449 744 - 234PF00005
PF13304
PF02463
PF13555
PF13401
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
4.00E-19
4.30E-10
4.10E-07
1.60E-05
4.60E-05
WP_015086493.1 2585 1445 - 379NO PFAM MATCH---
WP_015086494.1 3390 2568 - 273PF00881NitroreductaseNitroreductase family3.30E-08
WP_015086495.1 4724 3401 - 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-44
WP_015086496.1 5638 4723 - 304NO PFAM MATCH---
WP_078268697.1 5830 5638 - 63NO PFAM MATCH---
WP_015086497.1 7096 6376 - 239PF02661FicFic/DOC family9.20E-18
WP_015086498.1 8750 7130 - 539PF01051Rep_3Initiator Replication protein3.50E-45
WP_268741920.1 9794 9926 + 43NO PFAM MATCH---
WP_268741921.1 10115 10238 + 40NO PFAM MATCH---
WP_015086499.1 10243 11800 + 518PF13575DUF4135Domain of unknown function (DUF4135)2.10E-36
WP_015086500.1 11787 13557 + 589PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
1.70E-23
1.30E-08
WP_015086501.1 15612 13563 - 682PF03432RelaxaseRelaxase/Mobilisation nuclease domain1.40E-15
WP_015086502.1 15952 15601 - 116PF05713MobCBacterial mobilisation protein (MobC)5.50E-06
WP_015086503.1 16156 16435 + 92NO PFAM MATCH---
WP_015086504.1 16421 16688 + 88PF15738
PF05016
YafQ_toxin
ParE_toxin
Bacterial toxin of type II toxin-antitoxin system, YafQ
ParE toxin of type II toxin-antitoxin system, parDE
1.70E-29
3.90E-06
WP_015086505.1 17115 17328 + 70NO PFAM MATCH---
WP_235043933.1 17599 18766 + 388NO PFAM MATCH---

Results for WP_007664646.1 [Cronobacter condimenti] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_053531801.1 634326 638475 + 1382PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.30E-74
1.20E-41
3.20E-28
4.90E-28
5.40E-05
WP_007664636.1 638666 639281 + 204PF03548LolAOuter membrane lipoprotein carrier protein LolA2.40E-58
WP_007664637.1 639289 640633 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
2.30E-65
2.00E-23
9.20E-17
8.00E-14
1.00E-06
WP_007664638.1 640729 642022 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
6.50E-37
8.10E-34
WP_007664639.1 642316 643465 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.80E-26
8.40E-10
3.70E-06
4.20E-05
WP_007664641.1 644238 643497 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.80E-33
1.40E-18
5.70E-06
WP_007664643.1 646716 644433 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.60E-207
5.10E-44
WP_032983912.1 647625 646767 - 285PF01226Form_Nir_transFormate/nitrite transporter6.70E-75
WP_007664646.1 649792 648028 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.00E-83
5.20E-68
WP_007664653.1 649933 650626 + 230PF04239DUF421Protein of unknown function (DUF421)5.90E-16
WP_007664655.1 650788 651874 + 361PF00266Aminotran_5Aminotransferase class-V4.20E-71
WP_007664657.1 651942 653229 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.90E-150
WP_007664659.1 653372 654140 + 255PF01435Peptidase_M48Peptidase family M487.20E-29
WP_007664661.1 654314 655001 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
5.30E-85
1.00E-07
8.70E-05
2.80E-04
6.70E-04
WP_007664663.1 655112 656786 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.60E-99
2.40E-12
3.20E-07
WP_004387353.1 656900 657185 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_050554996.1 657430 659647 + 738PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-50
2.60E-16
9.00E-08

Results for WP_007747097.1 [Cronobacter dublinensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_161592453.1 573983 578135 + 1383PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.90E-74
3.20E-42
4.00E-28
5.10E-28
5.00E-05
WP_105630187.1 578323 578938 + 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.00E-58
WP_202628432.1 579003 580290 + 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.60E-65
2.00E-23
8.70E-17
7.30E-14
9.10E-07
WP_105639962.1 580386 581679 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
6.50E-37
8.00E-34
WP_007747076.1 581973 583122 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.20E-30
3.90E-09
6.80E-05
4.40E-04
WP_007730248.1 583929 583188 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.00E-33
8.20E-19
3.00E-06
WP_007747089.1 586407 584124 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.60E-208
5.20E-44
WP_105650952.1 587274 586458 - 271PF01226Form_Nir_transFormate/nitrite transporter5.10E-75
WP_007747097.1 589483 587719 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.30E-83
1.00E-67
WP_161592454.1 589624 590317 + 230PF04239DUF421Protein of unknown function (DUF421)2.00E-16
WP_007730258.1 590479 591565 + 361PF00266Aminotran_5Aminotransferase class-V8.90E-72
WP_161592455.1 591631 592918 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.80E-150
WP_105647865.1 593062 593830 + 255PF01435Peptidase_M48Peptidase family M487.30E-29
WP_007730267.1 594004 594691 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
5.40E-85
2.20E-07
1.00E-04
4.90E-04
7.20E-04
WP_038873078.1 594802 596476 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.30E-99
3.20E-12
2.50E-07
WP_004387353.1 596590 596875 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_237721608.1 597110 599336 + 741PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
3.10E-51
1.20E-18
2.50E-12
5.30E-04

Results for WP_007866469.1 [Cronobacter sakazakii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004387352.1 357136 355387 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
2.50E-60
1.40E-35
1.60E-10
2.10E-05
2.10E-04
WP_202632284.1 359398 357172 - 741PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.40E-52
1.00E-17
1.40E-13
WP_004387353.1 359920 359635 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_004387354.1 361708 360034 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.80E-99
3.40E-12
3.30E-07
WP_007866476.1 362506 361819 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.90E-85
9.80E-08
8.10E-05
2.10E-04
6.40E-04
WP_007866474.1 363970 362683 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.40E-150
WP_007866472.1 365124 364038 - 361PF00266Aminotran_5Aminotransferase class-V4.40E-71
WP_004387357.1 365979 365286 - 230PF04239DUF421Protein of unknown function (DUF421)3.50E-16
WP_007866469.1 366120 367884 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-84
6.20E-67
WP_012125217.1 368329 369145 + 271PF01226Form_Nir_transFormate/nitrite transporter5.20E-75
WP_004387360.1 369196 371479 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.50E-209
5.30E-44
WP_007782507.1 371674 372415 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.00E-32
8.00E-19
2.80E-06
WP_004387362.1 373597 372448 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
8.50E-26
6.00E-10
7.30E-05
6.20E-04
WP_007866459.1 375184 373891 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.20E-37
1.60E-33
WP_202622880.1 376567 375280 - 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.80E-65
2.80E-23
9.00E-17
6.80E-14
9.00E-07
WP_004387365.1 377251 376636 - 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.40E-58
WP_054625805.1 381614 377441 - 1390PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.20E-74
4.20E-42
3.20E-28
5.90E-28
5.50E-05

Results for WP_004387358.1 back to top

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Couldn't process WP_004387358.1 Genbank filestream. May be corrupt.

Results for WP_008915199.1 [Providencia sneebia DSM 19967] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004918089.1 1657235 1657730 + 164PF01037
PF13412
PF13404
AsnC_trans_reg
HTH_24
HTH_AsnC-type
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
7.40E-25
2.30E-21
1.30E-19
WP_008915192.1 1658183 1661918 + 1244PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
8.30E-75
3.40E-43
1.00E-28
1.50E-27
8.30E-06
WP_008915193.1 1661992 1662613 + 206PF03548LolAOuter membrane lipoprotein carrier protein LolA1.90E-53
WP_008915194.1 1662622 1663966 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
2.30E-64
1.30E-23
3.70E-16
5.30E-15
5.70E-07
WP_008915195.1 1664178 1665468 + 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
9.90E-38
9.00E-32
WP_008915196.1 1666491 1665699 - 263PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.40E-30
1.40E-18
1.90E-05
WP_008915197.1 1668946 1666663 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.70E-209
2.60E-43
WP_008915198.1 1669873 1669015 - 285PF01226Form_Nir_transFormate/nitrite transporter7.40E-75
WP_008915199.1 1671972 1670217 - 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-83
7.20E-67
WP_008915200.1 1672279 1673323 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
9.30E-58
3.30E-26
WP_008915201.1 1673976 1673526 - 149PF01475FURFerric uptake regulator family6.10E-48
WP_008915202.1 1674672 1674144 - 175PF00258
PF12641
PF12724
Flavodoxin_1
Flavodoxin_3
Flavodoxin_5
Flavodoxin
Flavodoxin domain
Flavodoxin domain
4.80E-33
1.50E-10
4.50E-07
WP_008915203.1 1675122 1674828 - 97PF01402
PF19891
PF19807
RHH_1
DUF6364
DUF6290
Ribbon-helix-helix protein, copG family
Family of unknown function (DUF6364)
Family of unknown function (DUF6290)
9.30E-07
4.10E-04
5.30E-04
WP_010848334.1 1675294 1675519 + 75INFERRED GENE---
WP_008915205.1 1676605 1675558 - 348PF00589Phage_integrasePhage integrase family4.40E-29
OO7_RS16455 1677048 1677201 + 51INFERRED GENE---
WP_008915207.1 1677231 1678398 + 388NO PFAM MATCH---

Results for WP_008911907.1 [Providencia burhodogranariea DSM 19968] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008911899.1 2178468 2180577 + 702PF00664
PF00005
PF03412
PF02463
PF13304
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
ABC transporter transmembrane region
ABC transporter
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
1.80E-44
9.50E-34
1.40E-08
1.20E-05
1.10E-04
WP_008911900.1 2180744 2181038 + 97PF01402
PF19807
RHH_1
DUF6290
Ribbon-helix-helix protein, copG family
Family of unknown function (DUF6290)
1.60E-08
2.10E-04
WP_008911901.1 2181192 2181720 + 175PF00258
PF12641
PF12724
Flavodoxin_1
Flavodoxin_3
Flavodoxin_5
Flavodoxin
Flavodoxin domain
Flavodoxin domain
7.20E-33
1.60E-10
4.60E-07
WP_008911902.1 2181891 2182341 + 149PF01475FURFerric uptake regulator family7.90E-48
WP_008911903.1 2183349 2183856 + 168NO PFAM MATCH---
WP_008911904.1 2185772 2184398 - 457PF03573OprDouter membrane porin, OprD family1.40E-24
WP_008911905.1 2186412 2187855 + 480PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
1.70E-29
1.20E-06
WP_008911906.1 2189063 2188019 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.50E-59
6.90E-25
WP_008911907.1 2189256 2191011 + 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.50E-83
3.40E-67
WP_008911908.1 2191355 2192222 + 288PF01226Form_Nir_transFormate/nitrite transporter1.90E-74
WP_008911909.1 2192282 2194565 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.70E-204
2.60E-43
WP_008911910.1 2194768 2195509 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-31
8.90E-19
1.50E-05
WP_236611209.1 2195889 2195742 - 48PF09391DUF2000Protein of unknown function (DUF2000)6.50E-11
WP_008911911.1 2196164 2195888 - 91PF09391DUF2000Protein of unknown function (DUF2000)1.70E-16
WP_008911912.1 2196349 2196832 + 160PF01037
PF13412
PF13404
PF01047
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
MarR family
6.80E-21
4.00E-20
4.40E-15
3.00E-04
WP_008911913.1 2197398 2198232 + 277NO PFAM MATCH---
WP_008911914.1 2198725 2199115 + 129PF03610EIIA-manPTS system fructose IIA component7.70E-26

Results for WP_009387734.1 [Acinetobacter sp. 105-3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009387788.1 22264 23563 + 432PF07690
PF06779
PF12832
MFS_1
MFS_4
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
1.50E-49
4.50E-07
9.30E-05
WP_002163154.1 23612 24512 + 299PF05681FumeraseFumarate hydratase (Fumerase)3.50E-74
WP_000722967.1 24508 25117 + 202PF05683Fumerase_CFumarase C-terminus5.90E-41
WP_227617236.1 26128 25162 - 321PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.10E-36
3.80E-15
1.50E-06
WP_009387777.1 26312 27800 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
6.20E-20
1.10E-16
1.70E-12
3.70E-11
1.20E-09
WP_009387768.1 27844 28699 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.30E-50
1.30E-35
3.20E-11
WP_009387749.1 28769 29663 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
1.30E-55
2.00E-10
4.40E-10
8.40E-07
2.60E-04
WP_009387773.1 29691 31362 + 556PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
7.10E-17
1.40E-09
2.30E-05
2.50E-05
WP_009387734.1 33626 31427 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.20E-75
4.30E-73
1.80E-08
WP_009387731.1 35158 33877 - 426PF03573OprDouter membrane porin, OprD family9.80E-107
WP_009387821.1 36536 35189 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
4.40E-46
5.20E-24
8.20E-09
WP_009387767.1 36907 38593 + 561PF00884
PF01663
PF16347
Sulfatase
Phosphodiest
DUF4976
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
Domain of unknown function (DUF4976)
2.40E-77
2.70E-05
3.70E-05
WP_081399996.1 38618 39572 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 19.50E-68
WP_009387847.1 39584 40772 + 395PF03573OprDouter membrane porin, OprD family1.20E-35
WP_009387845.1 41006 42083 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
2.90E-53
9.30E-19
1.70E-05
WP_009387841.1 42095 43040 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
6.70E-13
4.20E-06
WP_034677458.1 43763 43082 - 226PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
5.60E-11
8.00E-11

Results for WP_009512771.1 [Acinetobacter sp. WC-323] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_171062200.1 27272 28061 + 262NO PFAM MATCH---
WP_009512565.1 28057 29644 + 528PF03321GH3GH3 auxin-responsive promoter2.80E-81
WP_155758133.1 29685 30978 + 430PF02321OEPOuter membrane efflux protein1.70E-43
WP_009512780.1 30974 32138 + 387NO PFAM MATCH---
WP_009512567.1 32671 32200 - 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein3.60E-30
WP_009512937.1 33008 32648 - 119PF12840
PF01022
PF13463
PF13412
PF01047
HTH_20
HTH_5
HTH_27
HTH_24
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
2.50E-14
1.50E-07
1.40E-04
2.00E-04
5.10E-04
WP_050560468.1 33993 33057 - 311PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.40E-46
4.10E-04
WP_009512749.1 34082 34955 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-37
2.40E-17
WP_009512771.1 35202 37407 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.90E-76
6.80E-72
2.80E-08
WP_004653564.1 37570 37759 + 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005230570.1 38316 37857 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
4.90E-21
3.70E-18
4.10E-16
WP_009512681.1 40814 38327 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
5.20E-57
1.40E-45
4.10E-36
8.50E-10
6.50E-06
WP_009512759.1 41966 41123 - 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.20E-48
3.10E-34
8.00E-11
WP_032881534.1 43499 41966 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.30E-22
9.50E-17
1.30E-12
9.60E-10
3.30E-08
WP_032881535.1 43613 44633 + 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.60E-31
3.60E-13
1.40E-08
WP_009512738.1 44756 45488 + 243PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.10E-17
1.60E-05
2.00E-04
WP_009512588.1 45556 47020 + 487PF01425AmidaseAmidase1.50E-87

Results for WP_005670434.1 [Massilia timonae CCUG 45783] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005670418.1 23114 21893 - 406PF16153DUF4861Domain of unknown function (DUF4861)2.30E-84
WP_005670421.1 24999 23124 - 624PF18370
PF13517
PF01839
RGI_lyase
FG-GAP_3
FG-GAP
Rhamnogalacturonan I lyases beta-sheet domain
FG-GAP-like repeat
FG-GAP repeat
1.90E-26
1.10E-08
1.30E-07
WP_005670423.1 25261 26395 + 377PF01070
PF00478
PF03060
PF01645
PF00977
FMN_dh
IMPDH
NMO
Glu_synthase
His_biosynth
FMN-dependent dehydrogenase
IMP dehydrogenase / GMP reductase domain
Nitronate monooxygenase
Conserved region in glutamate synthase
Histidine biosynthesis protein
3.80E-126
2.00E-06
2.70E-06
2.40E-05
9.70E-04
WP_005670425.1 27406 26413 - 330PF00589Phage_integrasePhage integrase family1.00E-10
WP_005670427.1 29097 27645 - 483PF07690
PF00083
PF05977
PF12832
MFS_1
Sugar_tr
MFS_3
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Transmembrane secretion effector
MFS_1 like family
3.60E-39
8.70E-07
3.40E-06
1.50E-04
WP_005670428.1 29742 29145 - 198PF00440
PF16859
PF13977
PF16925
TetR_N
TetR_C_11
TetR_C_6
TetR_C_13
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
BetI-type transcriptional repressor, C-terminal
Tetracyclin repressor-like, C-terminal domain
2.80E-12
5.70E-09
3.10E-07
1.20E-06
WP_005670431.1 31687 29845 - 613PF13361
PF08378
PF13245
PF13538
PF00580
UvrD_C
NERD
AAA_19
UvrD_C_2
UvrD-helicase
UvrD-like helicase C-terminal domain
Nuclease-related domain
AAA domain
UvrD-like helicase C-terminal domain
UvrD/REP helicase N-terminal domain
7.50E-23
2.10E-14
1.30E-11
5.70E-11
1.10E-07
WP_229409918.1 32706 31761 - 314PF20434
PF07859
PF00326
PF12146
BD-FAE
Abhydrolase_3
Peptidase_S9
Hydrolase_4
BD-FAE
alpha/beta hydrolase fold
Prolyl oligopeptidase family
Serine aminopeptidase, S33
7.80E-24
7.30E-13
1.10E-12
2.10E-04
WP_005670434.1 32964 35166 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.10E-72
1.90E-70
3.50E-08
WP_005670436.1 35270 36872 + 533PF01593
PF01266
PF13450
PF07992
PF01946
Amino_oxidase
DAO
NAD_binding_8
Pyr_redox_2
Thi4
Flavin containing amine oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
Thi4 family
4.90E-18
1.40E-16
2.60E-12
1.90E-10
5.40E-09
WP_005670438.1 37298 39419 + 706PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.00E-45
6.80E-15
WP_005670439.1 39430 41269 + 612PF02836
PF02837
PF13364
Glyco_hydro_2_C
Glyco_hydro_2_N
BetaGal_dom4_5
Glycosyl hydrolases family 2, TIM barrel domain
Glycosyl hydrolases family 2, sugar binding domain
Beta-galactosidase jelly roll domain
1.80E-30
2.50E-17
2.50E-04
WP_005670442.1 41417 42140 + 240PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
5.10E-23
6.30E-12
WP_005670449.1 42580 42142 - 145PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomerase9.20E-30
WP_005670452.1 42977 45785 + 935PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
1.50E-29
1.30E-13
7.40E-12
WP_005670454.1 46611 45882 - 242PF07729
PF00392
PF13412
PF01726
FCD
GntR
HTH_24
LexA_DNA_bind
FCD domain
Bacterial regulatory proteins, gntR family
Winged helix-turn-helix DNA-binding
LexA DNA binding domain
4.50E-24
6.50E-19
1.20E-04
2.90E-04
WP_005670456.1 47247 47979 + 243PF13618Gluconate_2-dh3Gluconate 2-dehydrogenase subunit 32.80E-30

Results for WP_004208505.1 [Sphingobium sp. YR657] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004208513.1 110017 108892 - 374PF01244Peptidase_M19Membrane dipeptidase (Peptidase family M19)2.80E-74
WP_004208512.1 111378 110013 - 454PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
6.10E-22
2.00E-16
WP_072893759.1 113550 111387 - 720PF01804Penicil_amidasePenicillin amidase4.20E-122
WP_004208510.1 113616 114894 + 425PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
1.60E-33
3.40E-13
WP_004208509.1 114890 116216 + 441PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
1.30E-36
6.60E-19
WP_139278737.1 116312 118505 + 730NO PFAM MATCH---
WP_004208507.1 118566 118881 + 104NO PFAM MATCH---
WP_004208506.1 118987 119257 + 89NO PFAM MATCH---
WP_004208505.1 119271 120450 + 392PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.80E-63
WP_004208504.1 120446 121139 + 230PF07812TfuATfuA-like protein2.20E-36
WP_037490522.1 123150 121125 - 674PF07719
PF13431
PF00515
PF14559
PF13181
TPR_2
TPR_17
TPR_1
TPR_19
TPR_8
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
4.20E-08
6.70E-07
2.10E-05
3.70E-05
1.30E-04
WP_254792247.1 125289 123267 - 673PF00754
PF01204
PF03200
PF17389
F5_F8_type_C
Trehalase
Glyco_hydro_63
Bac_rhamnosid6H
F5/8 type C domain
Trehalase
Glycosyl hydrolase family 63 C-terminal domain
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
7.50E-09
1.10E-05
4.00E-05
1.30E-04
WP_004208501.1 128224 125419 - 934PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.50E-33
1.20E-14
WP_004208500.1 129917 128483 - 477PF04616Glyco_hydro_43Glycosyl hydrolases family 435.30E-64
WP_004208499.1 130998 129969 - 342PF04616Glyco_hydro_43Glycosyl hydrolases family 431.60E-54
WP_004208498.1 132647 131081 - 521PF06964Alpha-L-AF_CAlpha-L-arabinofuranosidase C-terminal domain6.70E-45
WP_004208497.1 133593 132666 - 308PF01408
PF13380
GFO_IDH_MocA
CoA_binding_2
Oxidoreductase family, NAD-binding Rossmann fold
CoA binding domain
1.50E-17
4.30E-04

Results for WP_015095783.1 [Pseudomonas sp. UW4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015095776.1 3863278 3862327 - 316PF01965
PF12833
PF00165
DJ-1_PfpI
HTH_18
HTH_AraC
DJ-1/PfpI family
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-26
5.00E-21
3.50E-19
WP_015095777.1 3863622 3864345 + 240PF02678
PF17954
PF07883
Pirin
Pirin_C_2
Cupin_2
Pirin
Quercetinase C-terminal cupin domain
Cupin domain
5.00E-35
1.00E-27
9.10E-07
WP_015095778.1 3865451 3864386 - 354PF12625
PF12833
PF00165
PF09312
Arabinose_bd
HTH_18
HTH_AraC
SurA_N
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
SurA N-terminal domain
9.40E-35
3.60E-18
3.70E-14
1.50E-04
WP_015095779.1 3865613 3866465 + 283PF02737
PF00725
PF03446
PF03435
PF02558
3HCDH_N
3HCDH
NAD_binding_2
Sacchrp_dh_NADP
ApbA
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
NAD binding domain of 6-phosphogluconate dehydrogenase
Saccharopine dehydrogenase NADP binding domain
Ketopantoate reductase PanE/ApbA
6.40E-63
4.70E-33
9.80E-07
1.80E-05
9.60E-04
WP_041474908.1 3866451 3867111 + 219PF00440
PF17932
TetR_N
TetR_C_24
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
2.00E-12
8.50E-08
WP_158467554.1 3867200 3867350 + 49NO PFAM MATCH---
WP_015095781.1 3867438 3867867 + 142NO PFAM MATCH---
WP_015095782.1 3867906 3868668 + 253NO PFAM MATCH---
WP_015095783.1 3876861 3874656 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.50E-71
7.60E-71
4.10E-08
WP_015095784.1 3877817 3876938 - 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-40
7.30E-18
WP_015095785.1 3877917 3879309 + 463PF00171AldedhAldehyde dehydrogenase family2.60E-139
WP_015095786.1 3879555 3879366 - 62NO PFAM MATCH---
WP_041475060.1 3881037 3879912 - 374PF07690MFS_1Major Facilitator Superfamily8.70E-14
WP_015095788.1 3882146 3881204 - 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.40E-38
7.50E-21
WP_015095789.1 3882640 3884017 + 458PF00083
PF07690
PF12832
Sugar_tr
MFS_1
MFS_1_like
Sugar (and other) transporter
Major Facilitator Superfamily
MFS_1 like family
4.20E-30
2.80E-22
3.10E-05
WP_015095790.1 3885533 3884078 - 484PF01235Na_Ala_sympSodium:alanine symporter family6.00E-149
WP_015095791.1 3886503 3885684 - 272PF12697
PF00561
PF12146
PF06028
PF07224
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
DUF915
Chlorophyllase
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase of unknown function (DUF915)
Chlorophyllase
2.20E-19
6.80E-18
3.80E-10
5.20E-06
1.80E-05

Results for WP_015115574.1 back to top

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Couldn't process WP_015115574.1 Genbank filestream. May be corrupt.

Results for WP_015137087.1 [Nostoc sp. PCC 7524] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015137079.1 829373 832310 + 978PF00005
PF00664
PF02463
ABC_tran
ABC_membrane
SMC_N
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
1.60E-29
2.30E-21
3.70E-08
WP_015137080.1 834145 832543 - 533PF04820Trp_halogenaseTryptophan halogenase1.70E-144
WP_015137081.1 834787 834172 - 204PF13759
PF13640
2OG-FeII_Oxy_5
2OG-FeII_Oxy_3
Putative 2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase superfamily
6.60E-25
4.80E-04
WP_015137082.1 836401 834877 - 507PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
8.20E-08
1.20E-06
WP_015137083.1 837004 836677 - 108PF07862Nif11Nif11 domain8.80E-10
WP_015137084.1 837599 837272 - 108PF07862Nif11Nif11 domain6.10E-09
WP_015137085.1 839164 837844 - 439PF13483Lactamase_B_3Beta-lactamase superfamily domain4.10E-08
WP_015137086.1 839355 840774 + 472PF07812TfuATfuA-like protein4.90E-46
WP_015137087.1 840800 841967 + 388PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-72
WP_015137088.1 843230 842183 - 348NO PFAM MATCH---
WP_015137089.1 843426 844572 + 381PF01494
PF00890
PF12831
PF07992
PF04820
FAD_binding_3
FAD_binding_2
FAD_oxidored
Pyr_redox_2
Trp_halogenase
FAD binding domain
FAD binding domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Tryptophan halogenase
3.00E-19
2.20E-07
2.20E-07
7.50E-07
1.30E-06
WP_015137090.1 844725 844572 - 50NO PFAM MATCH---
WP_171815340.1 846555 844773 - 593PF03865
PF08479
PF01103
PF07244
ShlB
POTRA_2
Omp85
POTRA
Haemolysin secretion/activation protein ShlB/FhaC/HecB
POTRA domain, ShlB-type
Omp85 superfamily domain
Surface antigen variable number repeat
6.40E-31
5.40E-24
1.80E-15
5.30E-08
WP_015137092.1 847840 847003 - 278PF07589PEP-CTERMPEP-CTERM motif5.40E-05
WP_015137093.1 848324 848585 + 86NO PFAM MATCH---
WP_015137094.1 849048 848739 - 102NO PFAM MATCH---
WP_085999901.1 849932 849197 - 244PF07702
PF00392
PF02082
PF08279
UTRA
GntR
Rrf2
HTH_11
UTRA domain
Bacterial regulatory proteins, gntR family
Iron-dependent Transcriptional regulator
HTH domain
1.80E-33
3.30E-23
3.80E-04
5.60E-04

Results for WP_015122225.1 [Rivularia sp. PCC 7116] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015122217.1 8010831 8012262 + 476PF14516AAA_35AAA-like domain1.10E-151
WP_015122218.1 8012410 8015149 + 912PF05226
PF14516
CHASE2
AAA_35
CHASE2 domain
AAA-like domain
1.80E-55
5.40E-27
WP_015122219.1 8015780 8019683 + 1300PF05696DUF826Protein of unknown function (DUF826)5.90E-06
WP_015122220.1 8019812 8020811 + 332PF07924
PF00211
NuiA
Guanylate_cyc
Nuclease A inhibitor-like protein
Adenylate and Guanylate cyclase catalytic domain
8.80E-21
1.30E-07
WP_015122221.1 8022125 8024171 + 681PF18065
PF00082
PF18047
PatG_C
Peptidase_S8
PatG_D
PatG C-terminal
Subtilase family
PatG Domain
3.90E-37
2.00E-35
9.20E-21
WP_015122222.1 8024201 8024435 + 77NO PFAM MATCH---
WP_198287563.1 8024620 8024851 + 76NO PFAM MATCH---
WP_015122224.1 8024924 8025107 + 60PF19155DUF5837Family of unknown function (DUF5837)2.00E-05
WP_015122225.1 8025269 8027585 + 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-100
WP_015122226.1 8027712 8027910 + 65PF19155
PF19158
DUF5837
DUF5840
Family of unknown function (DUF5837)
Family of unknown function (DUF5840)
1.20E-26
9.90E-05
WP_015122227.1 8027959 8028157 + 65PF19155
PF19158
DUF5837
DUF5840
Family of unknown function (DUF5837)
Family of unknown function (DUF5840)
2.00E-25
5.10E-04
WP_015122228.1 8028403 8028592 + 62PF19155
PF19158
DUF5837
DUF5840
Family of unknown function (DUF5837)
Family of unknown function (DUF5840)
6.30E-24
4.90E-04
WP_015122229.1 8028904 8032297 + 1130PF18065
PF00082
PF18047
PF00881
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
7.60E-35
1.30E-22
2.40E-21
3.60E-16
WP_015122230.1 8032401 8034837 + 811PF09423
PF16655
PhoD
PhoD_N
PhoD-like phosphatase
PhoD-like phosphatase, N-terminal domain
3.50E-67
5.50E-24
WP_044292550.1 8034975 8035809 + 277NO PFAM MATCH---
WP_015122232.1 8035910 8036648 + 245NO PFAM MATCH---
WP_015122233.1 8036717 8038922 + 734PF01764
PF00932
Lipase_3
LTD
Lipase (class 3)
Lamin Tail Domain
2.80E-27
4.00E-21

Results for WP_015143289.1 [Pleurocapsa sp. PCC 7327] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015143281.1 1717425 1716555 - 289PF02653BPD_transp_2Branched-chain amino acid transport system / permease component4.00E-54
WP_015143282.1 1718453 1717589 - 287PF20376DUF6671Domain of unknown function (DUF6671)9.80E-75
WP_015143283.1 1718729 1719770 + 346PF01137
PF05189
RTC
RTC_insert
RNA 3'-terminal phosphate cyclase
RNA 3'-terminal phosphate cyclase (RTC), insert domain
1.10E-79
3.70E-19
WP_015143284.1 1719922 1721410 + 495PF19289
PF19290
PF01523
PmbA_TldD_C
PmbA_TldD_M
PmbA_TldD
PmbA/TldA metallopeptidase C-terminal domain
PmbA/TldA metallopeptidase central domain
PmbA/TldA metallopeptidase domain 1
1.50E-36
1.40E-06
8.80E-06
WP_015143285.1 1721652 1721988 + 111NO PFAM MATCH---
WP_015143286.1 1724689 1722118 - 856PF12055
PF03065
DUF3536
Glyco_hydro_57
Domain of unknown function (DUF3536)
Glycosyl hydrolase family 57
2.30E-133
1.50E-18
WP_015143287.1 1726735 1725289 - 481PF18679
PF00881
HTH_57
Nitroreductase
ThcOx helix turn helix domain
Nitroreductase family
8.00E-28
4.70E-11
WP_015143288.1 1727947 1726795 - 383PF04909Amidohydro_2Amidohydrolase1.50E-36
WP_015143289.1 1730341 1728058 - 760PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-103
WP_015143290.1 1731513 1730475 - 345PF00089TrypsinTrypsin3.90E-12
WP_015143291.1 1731964 1731640 - 107PF02979NHase_alphaNitrile hydratase, alpha chain2.30E-05
WP_015143292.1 1732682 1737872 + 1729PF13191
PF00069
PF02518
PF07714
PF00512
AAA_16
Pkinase
HATPase_c
PK_Tyr_Ser-Thr
HisKA
AAA ATPase domain
Protein kinase domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Protein tyrosine and serine/threonine kinase
His Kinase A (phospho-acceptor) domain
6.10E-49
8.90E-38
1.50E-29
3.10E-23
1.90E-15
WP_015143293.1 1738137 1739232 + 364PF00072
PF02518
PF00512
Response_reg
HATPase_c
HisKA
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
1.90E-25
1.80E-15
1.20E-08
WP_015143294.1 1739669 1741244 + 524PF00149MetallophosCalcineurin-like phosphoesterase1.20E-11
WP_015143295.1 1742182 1741246 - 311PF13793
PF14572
PF00156
PF14681
Pribosyltran_N
Pribosyl_synth
Pribosyltran
UPRTase
N-terminal domain of ribose phosphate pyrophosphokinase
Phosphoribosyl synthetase-associated domain
Phosphoribosyl transferase domain
Uracil phosphoribosyltransferase
1.30E-43
2.30E-18
2.20E-16
4.10E-04
WP_015143296.1 1742640 1742298 - 113NO PFAM MATCH---
WP_015143298.1 1743939 1743303 - 211PF00697PRAIN-(5'phosphoribosyl)anthranilate (PRA) isomerase1.10E-45

Results for WP_015151318.1 [Oscillatoria acuminata PCC 6304] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015151315.1 6628161 6628935 + 257PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain1.30E-48
WP_198017777.1 6629779 6628996 - 260PF04261Dyp_peroxDyp-type peroxidase family8.00E-06
WP_008492026.1 6629862 6630634 + 257INFERRED GENE---
WP_156823967.1 6630958 6631339 + 126PF01609DDE_Tnp_1Transposase DDE domain8.70E-05
WP_156823968.1 6631423 6631795 + 123NO PFAM MATCH---
WP_015151316.1 6634292 6632243 - 682PF02897
PF00326
Peptidase_S9_N
Peptidase_S9
Prolyl oligopeptidase, N-terminal beta-propeller domain
Prolyl oligopeptidase family
9.80E-97
5.50E-64
WP_015147826.1 6635482 6634411 - 356PF13358
PF13565
PF13384
PF13551
PF13592
DDE_3
HTH_32
HTH_23
HTH_29
HTH_33
DDE superfamily endonuclease
Homeodomain-like domain
Homeodomain-like domain
Winged helix-turn helix
Winged helix-turn helix
2.00E-19
2.50E-10
2.70E-09
3.20E-06
4.90E-06
WP_015151317.1 6636782 6635678 - 367PF04909Amidohydro_2Amidohydrolase6.80E-35
WP_015151318.1 6639050 6636794 - 751PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-97
WP_015151319.1 6639934 6639565 - 122NO PFAM MATCH---
WP_015151320.1 6640391 6640067 - 107NO PFAM MATCH---
WP_015151321.1 6640738 6642211 + 490PF04261Dyp_peroxDyp-type peroxidase family1.50E-07
WP_015151322.1 6642463 6643570 + 368PF13358
PF13592
PF13565
PF13384
PF13551
DDE_3
HTH_33
HTH_32
HTH_23
HTH_29
DDE superfamily endonuclease
Winged helix-turn helix
Homeodomain-like domain
Homeodomain-like domain
Winged helix-turn helix
4.00E-37
1.70E-14
8.10E-12
4.30E-09
3.10E-07
WP_052315802.1 6644085 6643572 - 170PF07228SpoIIEStage II sporulation protein E (SpoIIE)1.10E-20
WP_015163292.1 6644088 6645315 + 409INFERRED GENE---
WP_044197969.1 6645791 6645374 - 138PF13808DDE_Tnp_1_assocDDE_Tnp_1-associated2.90E-18
WP_044195992.1 6645875 6646136 + 86NO PFAM MATCH---

Results for WP_015173934.1 [Calothrix sp. PCC 6303] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_158333195.1 53061 51309 - 583PF01734PatatinPatatin-like phospholipase1.50E-07
WP_144051164.1 54992 53057 - 644PF05199
PF00732
GMC_oxred_C
GMC_oxred_N
GMC oxidoreductase
GMC oxidoreductase
3.80E-31
2.30E-30
WP_015173930.1 56009 55097 - 303NO PFAM MATCH---
WP_051036842.1 56582 56159 - 140PF01609DDE_Tnp_1Transposase DDE domain8.20E-06
WP_051036844.1 57342 57009 - 110NO PFAM MATCH---
WP_015173931.1 59234 57479 - 584PF03098An_peroxidaseAnimal haem peroxidase4.90E-131
WP_015173932.1 60470 59948 - 173PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.80E-19
1.60E-15
WP_015173933.1 61142 62486 + 447PF14516
PF13191
AAA_35
AAA_16
AAA-like domain
AAA ATPase domain
2.50E-153
7.30E-05
WP_015173934.1 63721 66028 + 768PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.90E-103
WP_015173935.1 67938 66270 - 555PF14104
PF01609
DUF4277
DDE_Tnp_1
Domain of unknown function (DUF4277)
Transposase DDE domain
6.20E-42
8.70E-15
WP_015173936.1 69075 68223 - 283PF04072LCMLeucine carboxyl methyltransferase6.40E-46
WP_015173937.1 69499 70213 + 237NO PFAM MATCH---
WP_015173938.1 70466 71897 + 476PF04055
PF13186
PF13394
Radical_SAM
SPASM
Fer4_14
Radical SAM superfamily
Iron-sulfur cluster-binding domain
4Fe-4S single cluster domain
3.00E-16
2.00E-10
3.90E-05
WP_015173939.1 71993 78245 + 2083PF13191
PF00069
PF14516
PF07714
PF01590
AAA_16
Pkinase
AAA_35
PK_Tyr_Ser-Thr
GAF
AAA ATPase domain
Protein kinase domain
AAA-like domain
Protein tyrosine and serine/threonine kinase
GAF domain
2.30E-52
6.70E-39
7.40E-37
2.60E-21
5.00E-14
WP_012264372.1 78909 80576 + 555INFERRED GENE---

Results for WP_015177263.1 [Oscillatoria nigro-viridis PCC 7112] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015177256.1 4303415 4302713 - 233PF13507
PF01965
PF07685
PF00117
GATase_5
DJ-1_PfpI
GATase_3
GATase
CobB/CobQ-like glutamine amidotransferase domain
DJ-1/PfpI family
CobB/CobQ-like glutamine amidotransferase domain
Glutamine amidotransferase class-I
3.80E-44
4.30E-08
2.80E-07
6.50E-06
WP_015177257.1 4304002 4303717 - 94PF02700PurSPhosphoribosylformylglycinamidine (FGAM) synthase4.80E-31
WP_015177258.1 4304145 4304538 + 130PF01475FURFerric uptake regulator family1.30E-22
WP_015177259.1 4307218 4305007 - 736PF03412
PF00005
PF00664
PF12385
PF02463
Peptidase_C39
ABC_tran
ABC_membrane
Peptidase_C70
SMC_N
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
Papain-like cysteine protease AvrRpt2
RecF/RecN/SMC N terminal domain
1.40E-35
8.50E-32
8.40E-31
1.30E-05
9.30E-04
WP_011144722.1 4307704 4307818 + 38INFERRED GENE---
WP_015177260.1 4308239 4310240 + 666PF00082
PF18065
PF18047
Peptidase_S8
PatG_C
PatG_D
Subtilase family
PatG C-terminal
PatG Domain
3.20E-39
4.40E-37
1.20E-19
WP_015177261.1 4310336 4310588 + 83NO PFAM MATCH---
WP_015177262.1 4310612 4311371 + 252NO PFAM MATCH---
WP_015177263.1 4311420 4313751 + 776PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-98
WP_015177264.1 4313885 4314113 + 75PF19155DUF5837Family of unknown function (DUF5837)7.10E-20
WP_041622606.1 4314384 4316088 + 567PF19156
PF08241
PF13649
PF13847
PF08242
DUF5838
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Family of unknown function (DUF5838)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
6.60E-102
9.30E-19
3.20E-17
2.50E-13
6.30E-11
WP_015177266.1 4316175 4317138 + 320PF19156DUF5838Family of unknown function (DUF5838)4.00E-95
WP_015177267.1 4317330 4321209 + 1292PF18065
PF00082
PF18047
PF00881
PF18679
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
HTH_57
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
ThcOx helix turn helix domain
1.40E-30
8.10E-19
3.60E-14
4.20E-12
6.30E-11
WP_015177268.1 4321665 4322463 + 265PF19147DUF5829Family of unknown function (DUF5829)6.10E-50
WP_041623246.1 4323047 4322858 - 62NO PFAM MATCH---
WP_015177270.1 4323387 4323192 - 64NO PFAM MATCH---
WP_015177271.1 4323749 4323557 - 63NO PFAM MATCH---

Results for WP_015181082.1 [Allocoleopsis franciscana PCC 7113] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015181075.1 1171292 1170650 - 213PF01891
PF06570
CbiM
DUF1129
Cobalt uptake substrate-specific transmembrane region
Protein of unknown function (DUF1129)
2.30E-53
4.50E-04
WP_015181076.1 1171805 1171295 - 169PF13620
PF02369
CarboxypepD_reg
Big_1
Carboxypeptidase regulatory-like domain
Bacterial Ig-like domain (group 1)
1.70E-06
2.90E-04
WP_015181077.1 1172829 1171923 - 301PF14321DUF4382Domain of unknown function (DUF4382)5.50E-07
WP_216596366.1 1173371 1172969 - 133NO PFAM MATCH---
WP_051055582.1 1173833 1174874 + 346NO PFAM MATCH---
WP_015181079.1 1174981 1176070 + 362NO PFAM MATCH---
WP_015181080.1 1176337 1176700 + 120NO PFAM MATCH---
WP_015181081.1 1176799 1177168 + 122NO PFAM MATCH---
WP_015181082.1 1177443 1179702 + 752PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-102
WP_015181083.1 1179989 1181072 + 360PF04909Amidohydro_2Amidohydrolase2.30E-36
WP_015181084.1 1181270 1186862 + 1863PF13191
PF00069
PF07714
PF02518
PF01590
AAA_16
Pkinase
PK_Tyr_Ser-Thr
HATPase_c
GAF
AAA ATPase domain
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAF domain
5.40E-45
1.70E-37
3.30E-21
7.40E-19
4.80E-12
WP_015181085.1 1186865 1187234 + 122PF00072Response_regResponse regulator receiver domain1.30E-25
WP_015181086.1 1187258 1188443 + 394PF07228
PF00072
SpoIIE
Response_reg
Stage II sporulation protein E (SpoIIE)
Response regulator receiver domain
1.70E-36
3.90E-23
WP_015181087.1 1188617 1191533 + 971PF00072
PF02518
PF00211
PF00512
PF00989
Response_reg
HATPase_c
Guanylate_cyc
HisKA
PAS
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Adenylate and Guanylate cyclase catalytic domain
His Kinase A (phospho-acceptor) domain
PAS fold
5.80E-55
8.20E-31
2.50E-24
3.40E-18
3.40E-09
WP_015181088.1 1192160 1191653 - 168PF01475FURFerric uptake regulator family6.60E-39
WP_015181089.1 1192677 1194018 + 446PF07724
PF06689
PF00004
PF10431
PF01078
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
Mg_chelatase
AAA domain (Cdc48 subfamily)
ClpX C4-type zinc finger
ATPase family associated with various cellular activities (AAA)
C-terminal, D2-small domain, of ClpB protein
Magnesium chelatase, subunit ChlI
9.10E-48
4.30E-21
1.10E-16
4.70E-16
9.40E-06
WP_015181090.1 1194037 1195294 + 418PF03033
PF00201
Glyco_transf_28
UDPGT
Glycosyltransferase family 28 N-terminal domain
UDP-glucoronosyl and UDP-glucosyl transferase
7.40E-16
9.90E-12

Results for WP_015183733.1 [Allocoleopsis franciscana PCC 7113] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_081594668.1 4486522 4489039 + 838PF07697
PF07698
PF01966
7TMR-HDED
7TM-7TMR_HD
HD
7TM-HD extracellular
7TM receptor with intracellular HD hydrolase
HD domain
1.60E-57
1.30E-36
1.50E-17
WP_015183727.1 4490225 4489265 - 319PF00056
PF02866
Ldh_1_N
Ldh_1_C
lactate/malate dehydrogenase, NAD binding domain
lactate/malate dehydrogenase, alpha/beta C-terminal domain
1.00E-39
5.80E-29
WP_015183728.1 4490620 4490398 - 73PF11910NdhOCyanobacterial and plant NDH-1 subunit O3.60E-34
WP_015183729.1 4491662 4490702 - 319PF01149
PF06831
PF06827
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Formamidopyrimidine-DNA glycosylase N-terminal domain
Formamidopyrimidine-DNA glycosylase H2TH domain
Zinc finger found in FPG and IleRS
6.30E-33
1.50E-29
3.90E-09
WP_015183730.1 4492010 4491665 - 114PF02427PSI_PsaEPhotosystem I reaction centre subunit IV / PsaE2.10E-33
WP_015183731.1 4492864 4492225 - 212PF19928DUF6391Domain of unknown function (DUF6391)2.00E-53
WP_155898036.1 4493055 4493223 + 55NO PFAM MATCH---
WP_015183732.1 4493310 4493967 + 218PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamily1.10E-23
WP_015183733.1 4494095 4495427 + 443PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.30E-70
WP_015183734.1 4495435 4496812 + 458PF07812
PF13624
TfuA
SurA_N_3
TfuA-like protein
SurA N-terminal domain
8.40E-46
8.00E-04
WP_015183735.1 4498264 4496893 - 456PF02342
PF10138
PF07002
TerD
vWA-TerF-like
Copine
TerD domain
vWA found in TerF C terminus
Copine
8.50E-76
4.00E-75
3.10E-08
WP_015183736.1 4498968 4498395 - 190PF02342TerDTerD domain1.20E-77
WP_015183737.1 4499667 4499064 - 200PF02342TerDTerD domain9.80E-74
WP_155898037.1 4500014 4499828 - 61NO PFAM MATCH---
WP_015183738.1 4500231 4500789 + 185PF18933PsbP_2PsbP-like protein1.20E-12
WP_015183739.1 4501764 4500816 - 315PF00561
PF12697
PF12146
PF08386
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Abhydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
TAP-like protein
1.60E-33
2.00E-12
3.10E-12
5.30E-05
WP_015183740.1 4501916 4502594 + 225PF03167UDGUracil DNA glycosylase superfamily1.10E-21

Results for WP_015206708.1 [Cylindrospermum stagnale PCC 7417] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015206700.1 1303034 1303400 + 121NO PFAM MATCH---
WP_015206702.1 1303897 1306114 + 738PF00012
PF06723
HSP70
MreB_Mbl
Hsp70 protein
MreB/Mbl protein
2.40E-93
7.30E-18
WP_015206703.1 1306110 1306620 + 169PF01476LysMLysM domain2.30E-12
WP_015206704.1 1306619 1309115 + 831NO PFAM MATCH---
WP_015206705.1 1309158 1309773 + 204NO PFAM MATCH---
WP_015206706.1 1309765 1310245 + 159PF01025GrpEGrpE3.20E-17
WP_157162530.1 1310465 1310627 + 53PF02342TerDTerD domain4.90E-04
WP_015206707.1 1310879 1311452 + 190PF10502Peptidase_S26Signal peptidase, peptidase S269.20E-55
WP_015206708.1 1311596 1313897 + 766PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-104
WP_245587467.1 1313839 1315030 + 396PF04909Amidohydro_2Amidohydrolase3.20E-31
WP_015206710.1 1315056 1316121 + 354NO PFAM MATCH---
WP_245587468.1 1316258 1316372 + 37NO PFAM MATCH---
WP_157162531.1 1316418 1317450 + 343NO PFAM MATCH---
WP_015206712.1 1317610 1323448 + 1945PF13191
PF00069
PF14516
PF07714
PF01590
AAA_16
Pkinase
AAA_35
PK_Tyr_Ser-Thr
GAF
AAA ATPase domain
Protein kinase domain
AAA-like domain
Protein tyrosine and serine/threonine kinase
GAF domain
3.60E-47
2.20E-39
1.30E-31
1.70E-22
2.20E-12
WP_015206713.1 1323829 1324372 + 180PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily1.10E-08
WP_015206714.1 1325163 1326579 + 471PF14516
PF13401
AAA_35
AAA_22
AAA-like domain
AAA domain
3.60E-141
4.60E-04
WP_015206715.1 1327336 1326754 - 193NO PFAM MATCH---

Results for WP_015209732.1 [Cylindrospermum stagnale PCC 7417] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015209724.1 4966600 4965160 - 479PF13483
PF12706
PF00753
Lactamase_B_3
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
5.40E-11
2.00E-10
5.90E-04
WP_041233196.1 4968921 4966596 - 774PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.20E-24
WP_015209726.1 4970680 4968913 - 588PF12706
PF13483
Lactamase_B_2
Lactamase_B_3
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain
7.80E-14
3.70E-13
WP_015209727.1 4971346 4972852 + 501PF04820
PF01266
Trp_halogenase
DAO
Tryptophan halogenase
FAD dependent oxidoreductase
4.60E-108
8.00E-06
WP_015209728.1 4972836 4975494 + 885PF04820
PF07992
Trp_halogenase
Pyr_redox_2
Tryptophan halogenase
Pyridine nucleotide-disulphide oxidoreductase
3.20E-115
8.30E-04
WP_015209729.1 4975656 4977084 + 475PF00069
PF00023
PF12796
PF13857
PF13637
Pkinase
Ank
Ank_2
Ank_5
Ank_4
Protein kinase domain
Ankyrin repeat
Ankyrin repeats (3 copies)
Ankyrin repeats (many copies)
Ankyrin repeats (many copies)
1.20E-43
6.40E-25
6.00E-22
1.40E-21
6.50E-21
WP_015209730.1 4977208 4978696 + 495PF00069
PF07714
PF14531
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Kinase-like
7.40E-43
2.40E-18
1.90E-05
WP_015209731.1 4980425 4978730 - 564PF07812TfuATfuA-like protein3.40E-46
WP_015209732.1 4981618 4980433 - 394PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-72
WP_076611791.1 4981980 4982079 + 33INFERRED GENE---
WP_015209733.1 4982550 4982193 - 118PF07862Nif11Nif11 domain5.90E-04
WP_015209734.1 4983843 4982994 - 282PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.60E-14
WP_015209735.1 4984853 4983839 - 337PF13621
PF08007
Cupin_8
JmjC_2
Cupin-like domain
JmjC domain
3.90E-19
1.30E-06
CYLST_RS20890 4985311 4985554 + 81INFERRED GENE---
WP_041233198.1 4987370 4986029 - 446PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
5.00E-23
3.90E-18
WP_245587529.1 4987979 4987544 - 144NO PFAM MATCH---
WP_015209737.1 4990312 4988470 - 613NO PFAM MATCH---

Results for WP_015212631.1 [Anabaena sp. CCAP 1446/1C] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015212623.1 201566 200744 - 273PF11103
PF14261
DUF2887
DUF4351
Protein of unknown function (DUF2887)
Domain of unknown function (DUF4351)
1.60E-76
3.70E-21
WP_015212624.1 201929 202298 + 122PF00111Fer22Fe-2S iron-sulfur cluster binding domain1.70E-14
WP_015212625.1 202287 202893 + 201PF00565SNaseStaphylococcal nuclease homologue4.70E-16
WP_042465585.1 203010 203820 + 269PF00459Inositol_PInositol monophosphatase family2.00E-71
WP_015212627.1 203909 204848 + 312PF07719
PF00226
PF00515
PF13181
PF14559
TPR_2
DnaJ
TPR_1
TPR_8
TPR_19
Tetratricopeptide repeat
DnaJ domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
4.80E-11
3.40E-10
2.10E-09
1.70E-08
1.90E-07
WP_015212628.1 204847 206059 + 403PF13393tRNA-synt_HisHistidyl-tRNA synthetase3.30E-71
WP_015212629.1 206235 206463 + 75PF12838
PF14697
PF13237
PF12797
PF13187
Fer4_7
Fer4_21
Fer4_10
Fer4_2
Fer4_9
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
1.10E-07
5.00E-07
1.20E-06
2.90E-06
7.20E-06
WP_042465587.1 206575 207304 + 242PF00005
PF13304
PF02463
PF13555
PF13191
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA ATPase domain
3.00E-30
1.30E-08
1.30E-06
6.20E-05
5.30E-04
WP_015212631.1 207376 209680 + 767PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-102
WP_015212632.1 210568 211654 + 361PF04909Amidohydro_2Amidohydrolase4.50E-32
WP_015212633.1 211679 212762 + 360NO PFAM MATCH---
WP_015212634.1 212900 217953 + 1684INFERRED GENE---
WP_015212635.1 218462 219878 + 471PF14516
PF13401
AAA_35
AAA_22
AAA-like domain
AAA domain
2.10E-137
7.00E-04
WP_015212636.1 220547 219950 - 198PF08281
PF04542
PF04545
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
1.20E-11
5.90E-11
9.00E-06
WP_015212637.1 222214 221137 - 358PF07082DUF1350Protein of unknown function (DUF1350)8.10E-20
WP_242043213.1 223586 222350 - 411NO PFAM MATCH---
WP_015212640.1 223942 226228 + 761PF14516
PF09820
PF13173
PF13191
AAA_35
AAA-ATPase_like
AAA_14
AAA_16
AAA-like domain
Predicted AAA-ATPase
AAA domain
AAA ATPase domain
2.20E-176
3.20E-05
8.80E-05
1.10E-04

Results for WP_005579086.1 [Natronobacterium gregoryi SP2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015233712.1 0 951 + 317INFERRED GENE---
WP_005579077.1 1330 1729 + 132PF01894UPF0047Uncharacterised protein family UPF00473.60E-36
WP_005579079.1 2398 1732 - 221PF03009GDPDGlycerophosphoryl diester phosphodiesterase family2.10E-30
WP_005579081.1 2732 3179 + 148PF00072Response_regResponse regulator receiver domain8.30E-15
WP_005579083.1 3234 3954 + 239PF13561
PF00106
PF01370
PF08659
adh_short_C2
adh_short
Epimerase
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
5.20E-41
1.80E-37
7.40E-10
4.00E-04
WP_005579086.1 6051 4293 - 585PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-50
WP_005579088.1 6562 6214 - 115NO PFAM MATCH---
WP_005579090.1 7759 6631 - 375PF01145Band_7SPFH domain / Band 7 family1.30E-38
WP_015233713.1 8062 7915 - 48NO PFAM MATCH---
WP_005579092.1 8728 8155 - 190NO PFAM MATCH---
WP_005579093.1 9328 8875 - 150PF01877RNA_bindingRNA binding4.20E-34
WP_005579095.1 9570 9369 - 66NO PFAM MATCH---
WP_005579097.1 9681 9900 + 72NO PFAM MATCH---
WP_005579098.1 10269 10797 + 175NO PFAM MATCH---

Results for WP_015284732.1 [Methanoregula formicica SMSP] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015284724.1 688403 687707 - 231PF00515
PF07719
PF13181
PF13414
PF13428
TPR_1
TPR_2
TPR_8
TPR_11
TPR_14
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
2.50E-26
4.00E-26
5.30E-21
3.10E-18
7.10E-17
WP_015284725.1 688546 690127 + 526PF06418
PF00117
PF07722
PF01656
CTP_synth_N
GATase
Peptidase_C26
CbiA
CTP synthase N-terminus
Glutamine amidotransferase class-I
Peptidase C26
CobQ/CobB/MinD/ParA nucleotide binding domain
4.10E-120
3.60E-55
1.10E-06
1.80E-05
WP_015284726.1 690160 691078 + 305PF00958
PF02540
PF03054
PF00733
PF06508
GMP_synt_C
NAD_synthase
tRNA_Me_trans
Asn_synthase
QueC
GMP synthase C terminal domain
NAD synthase
tRNA methyl transferase HUP domain
Asparagine synthase
Queuosine biosynthesis protein QueC
1.60E-28
7.30E-12
1.20E-05
1.50E-04
5.00E-04
WP_148277584.1 691115 692246 + 376PF00202Aminotran_3Aminotransferase class-III9.90E-99
WP_015284728.1 692229 693288 + 352PF00155
PF00266
PF04864
Aminotran_1_2
Aminotran_5
Alliinase_C
Aminotransferase class I and II
Aminotransferase class-V
Allinase
9.40E-40
1.30E-05
3.20E-04
WP_015284729.1 693284 693797 + 170PF13238
PF13521
PF13207
PF13671
AAA_18
AAA_28
AAA_17
AAA_33
AAA domain
AAA domain
AAA domain
AAA domain
3.50E-21
1.10E-06
1.10E-04
5.80E-04
WP_015284730.1 693793 694390 + 198PF01066CDP-OH_P_transfCDP-alcohol phosphatidyltransferase3.00E-18
WP_015284731.1 695057 694403 - 217PF07812TfuATfuA-like protein1.70E-47
WP_015284732.1 696231 695019 - 403PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-97
WP_015284733.1 696406 696799 + 130NO PFAM MATCH---
WP_015284734.1 697785 696849 - 311PF12706
PF00753
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
2.70E-10
2.90E-07
WP_015284735.1 698449 697813 - 211PF10050DUF2284Predicted metal-binding protein (DUF2284)1.10E-48
WP_015284736.1 699535 698533 - 333PF00867
PF00752
XPG_I
XPG_N
XPG I-region
XPG N-terminal domain
3.80E-26
5.00E-17
WP_015284737.1 699874 699559 - 104NO PFAM MATCH---
WP_015284738.1 699947 700841 + 297PF06550
PF04258
SPP
Peptidase_A22B
Signal-peptide peptidase, presenilin aspartyl protease
Signal peptide peptidase
4.80E-83
9.00E-08
WP_015284739.1 701256 702471 + 404PF00999Na_H_ExchangerSodium/hydrogen exchanger family1.10E-59
WP_015284740.1 702644 703520 + 291PF00582UspUniversal stress protein family1.70E-46

Results for WP_006180515.1 [Natrinema pellirubrum DSM 15624] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006180507.1 39595 39124 - 156PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
7.40E-22
2.30E-09
WP_006180508.1 39748 40438 + 229PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.70E-16
2.50E-09
WP_006180509.1 40882 41059 + 58NO PFAM MATCH---
WP_006180510.1 41176 41386 + 69NO PFAM MATCH---
WP_006180511.1 41476 41929 + 150PF01877RNA_bindingRNA binding4.40E-34
WP_006180512.1 42056 42686 + 209PF13977
PF00440
PF17932
PF16859
PF17935
TetR_C_6
TetR_N
TetR_C_24
TetR_C_11
TetR_C_27
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
1.80E-19
3.10E-13
6.50E-06
2.90E-05
8.50E-04
WP_006180513.1 42682 44167 + 494PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
3.40E-65
1.80E-09
WP_006180514.1 44317 45556 + 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.30E-60
WP_006180515.1 45622 47386 + 587PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.10E-52
WP_015299028.1 47977 47443 - 177NO PFAM MATCH---
WP_006180517.1 48105 48585 + 159PF07883
PF02311
Cupin_2
AraC_binding
Cupin domain
AraC-like ligand binding domain
8.60E-13
6.60E-05
WP_006180518.1 48724 49336 + 203PF13238
PF13189
PF13207
PF13521
PF02224
AAA_18
Cytidylate_kin2
AAA_17
AAA_28
Cytidylate_kin
AAA domain
Cytidylate kinase-like family
AAA domain
AAA domain
Cytidylate kinase
2.90E-19
3.20E-18
8.80E-12
7.50E-08
1.20E-06
WP_006180519.1 50843 49340 - 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.50E-138
1.30E-24
2.10E-13
1.30E-08
5.20E-05
WP_015299026.1 51361 52240 + 292PF19107DUF5794Family of unknown function (DUF5794)1.30E-51
WP_049897232.1 53009 52727 - 93NO PFAM MATCH---
WP_015299023.1 53367 56100 + 910NO PFAM MATCH---
WP_006180524.1 56255 57554 + 432PF00145
PF05175
PF09445
DNA_methylase
MTS
Methyltransf_15
C-5 cytosine-specific DNA methylase
Methyltransferase small domain
RNA cap guanine-N2 methyltransferase
7.60E-67
7.90E-04
8.20E-04

Results for WP_015322773.1 [Natronococcus occultus SP4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015322766.1 3555221 3555902 + 226PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.70E-11
2.40E-08
WP_015322767.1 3555946 3556120 + 57NO PFAM MATCH---
WP_015322768.1 3556168 3556363 + 64NO PFAM MATCH---
WP_015322769.1 3556427 3556865 + 145PF01877RNA_bindingRNA binding2.90E-33
WP_083866614.1 3557253 3558594 + 446PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain2.50E-18
WP_015322771.1 3558754 3559288 + 177PF12840
PF01978
PF13412
HTH_20
TrmB
HTH_24
Helix-turn-helix domain
Sugar-specific transcriptional regulator TrmB
Winged helix-turn-helix DNA-binding
3.10E-10
1.40E-09
2.70E-05
WP_015322772.1 3559284 3559836 + 183NO PFAM MATCH---
WP_245549715.1 3560279 3560597 + 105NO PFAM MATCH---
WP_015322773.1 3560938 3562660 + 573PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-50
WP_015322774.1 3563118 3562650 - 155NO PFAM MATCH---
WP_049888960.1 3563424 3563925 + 166NO PFAM MATCH---
WP_015322776.1 3563917 3565516 + 532PF00474SSFSodium:solute symporter family9.60E-47
WP_015322777.1 3565515 3565980 + 154NO PFAM MATCH---
WP_015322778.1 3566075 3567062 + 328PF13593
PF01758
SBF_like
SBF
SBF-like CPA transporter family (DUF4137)
Sodium Bile acid symporter family
5.30E-10
4.80E-09
WP_015322779.1 3567163 3567775 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
3.00E-20
5.80E-17
1.40E-12
7.00E-06
1.60E-05
WP_015322780.1 3568208 3569909 + 566PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
5.70E-89
1.50E-21
WP_015322781.1 3571434 3569934 - 499PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.70E-141
2.50E-22
3.60E-13
1.10E-08
2.20E-05

Results for WP_015325501.1 [Methanomethylovorans hollandica DSM 15978] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015325493.1 2156290 2157397 + 368PF04055
PF02310
PF19864
Radical_SAM
B12-binding
Radical_SAM_N2
Radical SAM superfamily
B12 binding domain
Radical SAM proteins, N-terminal
6.00E-25
1.20E-09
6.50E-05
WP_015325494.1 2158133 2157428 - 234PF03692CxxCxxCCPutative zinc- or iron-chelating domain8.90E-13
WP_015325495.1 2158316 2158490 + 57PF17299DUF5350Family of unknown function (DUF5350)3.30E-27
WP_015325496.1 2158674 2160330 + 551PF00118Cpn60_TCP1TCP-1/cpn60 chaperonin family2.30E-184
WP_015325497.1 2161524 2160408 - 371PF13191
PF13401
PF00004
PF09079
PF12775
AAA_16
AAA_22
AAA
Cdc6_C
AAA_7
AAA ATPase domain
AAA domain
ATPase family associated with various cellular activities (AAA)
CDC6, C terminal winged helix domain
P-loop containing dynein motor region
3.20E-13
1.90E-08
4.90E-08
6.90E-07
6.60E-06
WP_015325498.1 2162152 2161624 - 175PF00583
PF13673
PF13508
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
1.50E-08
3.00E-08
1.50E-06
3.60E-05
WP_015325499.1 2163382 2162200 - 393PF00266
PF01053
PF01041
PF01212
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotransferase class-V
Cys/Met metabolism PLP-dependent enzyme
DegT/DnrJ/EryC1/StrS aminotransferase family
Beta-eliminating lyase
2.90E-128
3.50E-08
2.00E-05
1.60E-04
WP_015325500.1 2163578 2163422 - 51NO PFAM MATCH---
WP_015325501.1 2163774 2165052 + 425PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.70E-83
WP_048831155.1 2165027 2165711 + 227PF07812TfuATfuA-like protein2.20E-47
WP_015325503.1 2166639 2165868 - 256PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.20E-13
WP_245546284.1 2167304 2166806 - 165PF01613Flavin_ReductFlavin reductase like domain4.20E-25
WP_015325505.1 2168058 2167452 - 201PF03692CxxCxxCCPutative zinc- or iron-chelating domain5.30E-09
WP_015325506.1 2168991 2168220 - 256PF03649UPF0014Uncharacterised protein family (UPF0014)3.50E-80
WP_015325507.1 2169644 2168987 - 218PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
8.80E-30
1.40E-09
5.40E-09
5.00E-05
6.40E-05
WP_015325508.1 2170098 2169660 - 145PF01047
PF12802
MarR
MarR_2
MarR family
MarR family
2.00E-10
6.30E-07
WP_015325509.1 2170793 2170241 - 183PF13238
PF13671
PF13207
PF13521
PF01712
AAA_18
AAA_33
AAA_17
AAA_28
dNK
AAA domain
AAA domain
AAA domain
AAA domain
Deoxynucleoside kinase
3.30E-22
1.90E-07
9.20E-07
6.00E-06
5.80E-05

Results for WP_015965102.1 [Enterobacteriaceae bacterium strain FGI 57] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015965093.1 2966640 2964372 - 755PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
5.60E-52
2.40E-15
7.30E-08
WP_015965094.1 2967163 2966878 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-29
6.10E-08
9.10E-05
WP_015965095.1 2968990 2967316 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
5.40E-100
3.60E-12
4.80E-07
WP_015965096.1 2969788 2969104 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.70E-85
2.40E-07
2.60E-04
6.80E-04
9.20E-04
WP_015965097.1 2970730 2969962 - 255PF01435Peptidase_M48Peptidase family M482.10E-26
WP_015965098.1 2972156 2970872 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.60E-151
WP_015965099.1 2973313 2972224 - 362PF00266Aminotran_5Aminotransferase class-V1.60E-72
WP_015965101.1 2974195 2973502 - 230PF04239DUF421Protein of unknown function (DUF421)3.70E-14
WP_015965102.1 2975407 2977174 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.20E-82
2.70E-67
WP_041686279.1 2977574 2978432 + 285PF01226Form_Nir_transFormate/nitrite transporter3.90E-74
WP_015965104.1 2978488 2980771 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.20E-206
9.70E-44
WP_015965105.1 2980978 2981719 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-31
8.20E-19
2.40E-06
WP_015965106.1 2982632 2981747 - 294PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
2.30E-14
1.00E-11
WP_015965107.1 2982735 2983809 + 357PF02275CBAHLinear amide C-N hydrolases, choloylglycine hydrolase family1.60E-37
WP_015965108.1 2985009 2983860 - 382PF07690
PF06779
PF00083
PF12832
PF05977
MFS_1
MFS_4
Sugar_tr
MFS_1_like
MFS_3
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
Transmembrane secretion effector
6.10E-28
9.20E-09
2.40E-05
2.80E-05
9.80E-04
WP_015965109.1 2986148 2985284 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-115
WP_015965110.1 2986767 2986149 - 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.80E-28
5.00E-13
5.30E-13
5.60E-12
7.70E-11

Results for WP_015671753.1 [Serratia rubidaea] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015671745.1 1689307 1689919 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
2.90E-58
2.70E-04
WP_051032620.1 1689986 1691273 + 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
5.40E-64
1.50E-23
2.40E-15
7.90E-13
1.40E-06
WP_235082539.1 1691382 1692675 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.70E-34
1.60E-30
WP_054307489.1 1692942 1693359 + 138PF00293NUDIXNUDIX domain1.10E-10
WP_061324471.1 1693620 1694772 + 383PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.60E-31
4.70E-12
4.20E-07
5.50E-05
WP_054307491.1 1695565 1694824 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-29
1.50E-18
1.00E-05
WP_015671751.1 1698132 1695849 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.80E-208
8.20E-43
WP_054307492.1 1699041 1698183 - 285PF01226Form_Nir_transFormate/nitrite transporter3.10E-76
WP_015671753.1 1701228 1699464 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-84
7.60E-67
WP_164844207.1 1701756 1704174 + 805PF01011
PF13360
PQQ
PQQ_2
PQQ enzyme repeat
PQQ-like domain
1.30E-35
6.70E-19
WP_235082540.1 1704402 1705449 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.90E-63
1.40E-26
WP_235082541.1 1705790 1706876 + 361PF00266Aminotran_5Aminotransferase class-V3.00E-63
WP_212602906.1 1706985 1708272 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.00E-148
WP_015671758.1 1708537 1709227 + 229PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
1.40E-81
9.60E-08
2.10E-05
9.20E-05
9.10E-04
WP_041411759.1 1709419 1711093 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.80E-99
7.90E-12
4.60E-07
WP_015671760.1 1711156 1711441 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.90E-28
3.50E-07
WP_235082802.1 1711763 1713986 + 740PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.50E-52
9.70E-19
1.00E-11

Results for WP_015337570.1 [Maridesulfovibrio hydrothermalis AM13 = DSM 14728] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015337579.1 576070 574963 - 368PF00534
PF13692
PF13439
PF13477
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like
Glycosyl transferase 4-like domain
1.10E-19
1.80E-15
2.50E-13
1.30E-09
3.70E-06
WP_015337578.1 576243 577137 + 297PF00535
PF13641
PF10111
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
2.00E-27
2.40E-19
2.80E-17
WP_015337577.1 577541 577178 - 120PF02391MoaEMoaE protein2.60E-08
WP_015337576.1 577570 580210 + 879PF07719TPR_2Tetratricopeptide repeat1.50E-04
WP_015337575.1 580371 581373 + 333NO PFAM MATCH---
WP_015337574.1 582901 581389 - 503PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
1.60E-23
1.10E-12
WP_015337573.1 583282 582919 - 120PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger1.70E-12
WP_015337571.1 584100 584820 + 239PF10294Methyltransf_16Lysine methyltransferase9.00E-10
WP_015337570.1 584819 586547 + 575PF02624
PF00515
PF07719
PF13181
PF13414
YcaO
TPR_1
TPR_2
TPR_8
TPR_11
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
1.90E-53
1.30E-15
1.50E-13
6.70E-08
1.20E-07
WP_015337569.1 586750 587068 + 105PF04358DsrCDsrC like protein3.70E-34
WP_015337568.1 587397 587628 + 76PF01197Ribosomal_L31Ribosomal protein L311.20E-29
WP_034623787.1 587899 588826 + 308PF07136
PF18949
DUF1385
DUF5693
Protein of unknown function (DUF1385)
Family of unknown function (DUF5693)
4.00E-77
2.80E-04
WP_015337566.1 588829 589900 + 356PF03462
PF00472
PCRF
RF-1
PCRF domain
RF-1 domain
2.20E-73
1.10E-40
WP_015337565.1 590274 591138 + 287PF17827
PF05175
PF06325
PF13649
PF13847
PrmC_N
MTS
PrmA
Methyltransf_25
Methyltransf_31
PrmC N-terminal domain
Methyltransferase small domain
Ribosomal protein L11 methyltransferase (PrmA)
Methyltransferase domain
Methyltransferase domain
5.10E-20
1.50E-10
1.30E-09
7.40E-09
2.60E-07
WP_015337564.1 591312 592239 + 308PF03331LpxCUDP-3-O-acyl N-acetylglycosamine deacetylase7.20E-101
WP_015337562.1 592496 594629 + 710PF08269
PF17200
PF00015
PF17201
PF07889
dCache_2
sCache_2
MCPsignal
Cache_3-Cache_2
DUF1664
Cache domain
Single Cache domain 2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache 3/Cache 2 fusion domain
Protein of unknown function (DUF1664)
2.00E-62
1.60E-41
5.40E-33
5.30E-16
6.20E-04
WP_015337561.1 595641 594804 - 278NO PFAM MATCH---

Results for WP_015337618.1 [Maridesulfovibrio hydrothermalis AM13 = DSM 14728] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015337627.1 533074 530212 - 953PF00563
PF08269
PF00990
PF17200
PF17201
EAL
dCache_2
GGDEF
sCache_2
Cache_3-Cache_2
EAL domain
Cache domain
Diguanylate cyclase, GGDEF domain
Single Cache domain 2
Cache 3/Cache 2 fusion domain
4.80E-73
1.70E-53
1.50E-51
8.40E-44
3.90E-41
WP_034623783.1 533507 534650 + 380PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
5.70E-119
1.30E-17
WP_015337625.1 534633 536310 + 558PF02518
PF00989
PF13426
PF00512
PF08448
HATPase_c
PAS
PAS_9
HisKA
PAS_4
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
PAS domain
His Kinase A (phospho-acceptor) domain
PAS fold
6.10E-18
1.80E-14
1.10E-09
4.10E-08
3.50E-07
WP_015337624.1 536687 537875 + 395PF02350
PF02684
Epimerase_2
LpxB
UDP-N-acetylglucosamine 2-epimerase
Lipid-A-disaccharide synthetase
2.90E-111
7.50E-04
WP_015337623.1 537914 540179 + 754PF13641
PF13632
PF05157
Glyco_tranf_2_3
Glyco_trans_2_3
T2SSE_N
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Type II secretion system (T2SS), protein E, N-terminal domain
3.10E-34
4.00E-33
2.00E-18
WP_154655351.1 540201 543813 + 1203PF07719
PF14559
PF00515
PF13424
PF13181
TPR_2
TPR_19
TPR_1
TPR_12
TPR_8
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.60E-40
3.90E-37
2.20E-30
1.80E-28
9.30E-28
WP_015337621.1 543883 544876 + 330PF14488DUF4434Domain of unknown function (DUF4434)3.10E-21
WP_015337619.1 545224 545974 + 249PF02661FicFic/DOC family3.30E-26
WP_015337618.1 548093 546395 - 565PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-42
WP_015337617.1 548295 548973 + 225PF09335SNARE_assocSNARE associated Golgi protein3.50E-21
WP_015337616.1 549217 549427 + 69NO PFAM MATCH---
WP_015337615.1 549423 549813 + 129PF11351GTA_holin_3TMHolin of 3TMs, for gene-transfer release2.00E-22
WP_015337614.1 549805 550015 + 69NO PFAM MATCH---
WP_015337613.1 550011 550242 + 76NO PFAM MATCH---
WP_015337612.1 550247 550529 + 93NO PFAM MATCH---
WP_015337611.1 550497 552039 + 513NO PFAM MATCH---
WP_015337610.1 552038 552605 + 188NO PFAM MATCH---

Results for WP_008929655.1 [Alcanivorax hongdengensis A-11-3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_083851758.1 319 10 - 102PF13166
PF13476
AAA_13
AAA_23
AAA domain
AAA domain
5.20E-22
3.90E-04
WP_157375677.1 739 430 - 102NO PFAM MATCH---
WP_008929649.1 1752 1101 - 216NO PFAM MATCH---
WP_008929650.1 1982 2978 + 331PF12833
PF00165
PF01965
PF08279
PF02001
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_11
DUF134
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
DJ-1/PfpI family
HTH domain
Protein of unknown function DUF134
2.70E-22
1.00E-13
9.20E-13
1.40E-04
8.60E-04
WP_008929651.1 3576 3069 - 168PF12796
PF13637
PF13606
PF13857
PF00023
Ank_2
Ank_4
Ank_3
Ank_5
Ank
Ankyrin repeats (3 copies)
Ankyrin repeats (many copies)
Ankyrin repeat
Ankyrin repeats (many copies)
Ankyrin repeat
7.80E-17
1.80E-13
9.40E-12
2.90E-09
3.20E-04
WP_008929652.1 4034 4316 + 93PF03992ABMAntibiotic biosynthesis monooxygenase1.20E-15
WP_157375681.1 5257 4399 - 285PF00561
PF12146
PF02230
Abhydrolase_1
Hydrolase_4
Abhydrolase_2
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Phospholipase/Carboxylesterase
1.70E-11
3.60E-06
8.40E-04
WP_008929654.1 5794 5329 - 154PF01814HemerythrinHemerythrin HHE cation binding domain1.60E-12
WP_008929655.1 6063 8253 + 729PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.60E-74
2.20E-72
9.50E-10
WP_008929656.1 8276 8732 + 151NO PFAM MATCH---
WP_008929657.1 9669 8757 - 303PF00892EamAEamA-like transporter family4.10E-46
WP_008929658.1 9781 10690 + 302PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
1.00E-41
3.40E-16
2.80E-04
WP_008929659.1 11653 10696 - 318PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
7.60E-20
4.80E-12
1.60E-05
WP_008929660.1 13043 11669 - 457NO PFAM MATCH---
WP_008929661.1 13569 12966 - 200PF01852
PF03364
START
Polyketide_cyc
START domain
Polyketide cyclase / dehydrase and lipid transport
2.00E-08
1.80E-04
WP_157375683.1 14215 13552 - 220PF01553AcyltransferaseAcyltransferase1.20E-30
WP_008929663.1 14654 14237 - 138PF00472RF-1RF-1 domain2.20E-24

Results for WP_009401484.1 [Pseudomonas bharatica CSV86] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009401495.1 2779949 2780408 + 152PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
3.50E-23
1.70E-08
3.80E-04
WP_009401494.1 2780407 2782639 + 743PF20256
PF02738
PF10518
MoCoBD_2
MoCoBD_1
TAT_signal
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
TAT (twin-arginine translocation) pathway signal sequence
1.40E-33
8.60E-32
1.10E-04
WP_009401493.1 2782649 2783961 + 437INFERRED GENE---
WP_009401491.1 2784185 2785208 + 340PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.60E-36
4.20E-23
WP_009401489.1 2787430 2785258 - 723PF20256
PF02738
PF01315
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
6.00E-50
8.40E-50
1.10E-17
WP_009401487.1 2788434 2787441 - 330PF00941
PF03450
FAD_binding_5
CO_deh_flav_C
FAD binding domain in molybdopterin dehydrogenase
CO dehydrogenase flavoprotein C-terminal domain
1.90E-51
1.30E-15
WP_009401486.1 2788934 2788430 - 167PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
8.40E-32
5.80E-07
2.70E-04
WP_009401485.1 2788993 2789590 + 198PF12804NTP_transf_3MobA-like NTP transferase domain1.70E-37
WP_009401484.1 2789695 2791888 + 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.20E-74
3.60E-71
4.50E-08
WP_009401483.1 2792465 2793824 + 452PF00120Gln-synt_CGlutamine synthetase, catalytic domain1.80E-109
WP_009401482.1 2793869 2794955 + 361PF13416
PF13343
PF01547
PF13531
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.60E-28
2.20E-16
4.00E-12
1.90E-04
WP_009401481.1 2794969 2796265 + 431PF01266
PF07992
PF13450
PF01494
PF12831
DAO
Pyr_redox_2
NAD_binding_8
FAD_binding_3
FAD_oxidored
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD binding domain
FAD dependent oxidoreductase
5.20E-55
9.00E-05
1.70E-04
2.90E-04
4.10E-04
WP_009401480.1 2797265 2796395 - 289PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.70E-24
3.40E-04
WP_009401479.1 2797993 2797366 - 208PF01810LysELysE type translocator4.00E-25
WP_000610830.1 2799973 2798695 - 425PF01610
PF14690
PF13542
DDE_Tnp_ISL3
zf-ISL3
HTH_Tnp_ISL3
Transposase
zinc-finger of transposase IS204/IS1001/IS1096/IS1165
Helix-turn-helix domain of transposase family ISL3
5.70E-63
4.20E-11
7.30E-10
WP_040363373.1 2800990 2799985 - 334PF03773ArsP_1Predicted permease7.40E-56
WP_000349485.1 2801131 2801446 + 104PF12840
PF01022
PF12802
PF09339
PF01978
HTH_20
HTH_5
MarR_2
HTH_IclR
TrmB
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
IclR helix-turn-helix domain
Sugar-specific transcriptional regulator TrmB
3.60E-12
8.70E-07
1.60E-06
1.70E-04
2.50E-04

Results for WP_001305927.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001602102.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309023.2 31764 34029 + 755INFERRED GENE---
WP_000167336.1 34520 34235 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 36353 34679 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 37147 36463 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001353317.1 38084 37319 - 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000445247.1 39536 38252 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.00E-151
WP_000057131.1 40695 39606 - 362PF00266Aminotran_5Aminotransferase class-V2.80E-76
WP_054495458.1 41586 40893 - 230PF04239DUF421Protein of unknown function (DUF421)1.20E-15
WP_001602102.1 41715 43476 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.70E-82
6.30E-67
WP_000642546.1 43881 44739 + 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001292812.1 44793 47076 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000111043.1 47267 48008 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
NP_415420.1 48105 48216 + 37INFERRED GENE---
WP_054495460.1 49647 48216 - 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
7.10E-28
7.60E-13
WP_054495461.1 51005 49856 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
7.40E-27
2.20E-09
8.30E-07
WP_000165876.1 51319 51946 + 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_001602099.1 52844 51980 - 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
9.40E-123
9.60E-04

Results for WP_008636269.1 [Halobacillus sp. BAB-2008] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008636265.1 223 0 - 74PF07992
PF13450
Pyr_redox_2
NAD_binding_8
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
3.40E-07
6.80E-05
WP_008636266.1 354 1539 + 394PF00155Aminotran_1_2Aminotransferase class I and II1.80E-67
WP_008636267.1 2426 1574 - 283PF19420
PF02274
DDAH_eukar
ADI
N,N dimethylarginine dimethylhydrolase, eukaryotic
Arginine deiminase
5.50E-34
4.00E-30
WP_081594805.1 2605 2863 + 85NO PFAM MATCH---
WP_008636268.1 2982 4797 + 604NO PFAM MATCH---
WP_008636269.1 4793 6737 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-77
WP_008636270.1 6758 8273 + 504PF00881NitroreductaseNitroreductase family2.20E-10
WP_008636279.1 9765 8310 - 484PF00171
PF07368
Aldedh
DUF1487
Aldehyde dehydrogenase family
Protein of unknown function (DUF1487)
8.40E-168
3.00E-04
WP_039871227.1 10296 9843 - 150PF13673
PF00583
PF13508
PF13527
PF14542
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Acetyltransf_9
Acetyltransf_CG
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
2.70E-17
5.70E-13
2.40E-11
9.10E-07
6.90E-05
WP_008636281.1 10441 11824 + 460PF10011DUF2254Predicted membrane protein (DUF2254)6.70E-93
WP_008636282.1 12316 11890 - 141PF16242
PF01243
Pyrid_ox_like
Putative_PNPOx
Pyridoxamine 5'-phosphate oxidase like
Pyridoxamine 5'-phosphate oxidase
1.40E-20
2.50E-17
WP_008636283.1 12550 13435 + 294PF06028
PF07819
PF02089
PF00561
PF12146
DUF915
PGAP1
Palm_thioest
Abhydrolase_1
Hydrolase_4
Alpha/beta hydrolase of unknown function (DUF915)
PGAP1-like protein
Palmitoyl protein thioesterase
alpha/beta hydrolase fold
Serine aminopeptidase, S33
9.90E-59
1.20E-05
1.50E-05
4.90E-05
1.40E-04
WP_008636302.1 14181 13503 - 225PF08241
PF13649
PF13847
PF01209
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_31
Ubie_methyltran
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
5.50E-24
4.50E-22
4.00E-18
2.40E-13
9.30E-13
WP_008636304.1 14690 16925 + 744PF02867
PF00317
Ribonuc_red_lgC
Ribonuc_red_lgN
Ribonucleotide reductase, barrel domain
Ribonucleotide reductase, all-alpha domain
9.20E-153
3.00E-19

Results for WP_004061261.1 [Haloferax lucentense DSM 14919] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004061251.1 24544 24397 - 48NO PFAM MATCH---
WP_004061254.1 24688 25399 + 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.50E-04
WP_004061255.1 25457 25691 + 77NO PFAM MATCH---
WP_004044681.1 26666 25772 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_004044680.1 27335 26765 - 189PF01988VIT1VIT family2.90E-09
WP_004044679.1 27634 27334 - 99PF02680DUF211Uncharacterized ArCR, COG18884.80E-34
WP_004061258.1 28980 27732 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.50E-153
5.80E-09
6.20E-06
WP_004061260.1 29346 30174 + 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_004061261.1 30223 31912 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-57
WP_004061262.1 33246 32127 - 372PF01889DUF63Membrane protein of unknown function DUF631.30E-36
WP_004061263.1 33851 33380 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.20E-16
1.90E-15
5.70E-08
4.80E-07
WP_004061264.1 34764 33966 - 265PF00459Inositol_PInositol monophosphatase family1.60E-48
WP_004061265.1 34855 35125 + 89NO PFAM MATCH---
WP_004044671.1 36183 36669 + 161PF03745DUF309Domain of unknown function (DUF309)1.90E-15
WP_004061266.1 36788 37655 + 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_004061267.1 38192 37742 - 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061268.1 38597 38216 - 126PF19137DUF5820Family of unknown function (DUF5820)6.60E-54

Results for WP_002731663.1 [Microcystis aeruginosa TAIHU98] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042790441.1 1779782 1779386 - 131NO PFAM MATCH---
WP_193745184.1 1780138 1781884 + 581PF01609DDE_Tnp_1Transposase DDE domain6.10E-12
WP_228051387.1 1782660 1781925 - 244PF04851ResIIIType III restriction enzyme, res subunit1.30E-13
WP_002733304.1 1787200 1783255 - 1314PF18065
PF00082
PF18047
PF00881
PF18679
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
HTH_57
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
ThcOx helix turn helix domain
8.10E-31
3.50E-21
1.40E-16
2.50E-12
1.10E-10
WP_002734633.1 1787240 1787900 + 219PF14907
PF08843
NTP_transf_5
AbiEii
Uncharacterised nucleotidyltransferase
Nucleotidyl transferase AbiEii toxin, Type IV TA system
1.20E-05
1.90E-04
WP_002733731.1 1788943 1788139 - 267PF19147DUF5829Family of unknown function (DUF5829)2.60E-48
WP_002733928.1 1789961 1788995 - 321PF19156DUF5838Family of unknown function (DUF5838)3.50E-80
WP_002734081.1 1790507 1790255 - 83PF19155DUF5837Family of unknown function (DUF5837)1.10E-22
WP_002731663.1 1792969 1790638 - 776PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-97
WP_002781476.1 1793273 1793030 - 80NO PFAM MATCH---
WP_002781478.1 1793575 1793323 - 83NO PFAM MATCH---

Results for WP_003239223.1 [Pseudomonas fluorescens BRIP34879] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003239212.1 1990 49 - 646PF00015
PF02743
PF00672
MCPsignal
dCache_1
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
9.00E-40
3.30E-27
3.30E-09
WP_003239214.1 2699 2135 - 187PF00440TetR_NBacterial regulatory proteins, tetR family1.80E-10
WP_003239216.1 2871 3519 + 215PF13417
PF13409
PF02798
PF14497
PF00043
GST_N_3
GST_N_2
GST_N
GST_C_3
GST_C
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
1.80E-14
4.90E-14
1.00E-10
3.90E-07
2.70E-06
WP_003239218.1 4160 3575 - 194PF00857IsochorismataseIsochorismatase family1.60E-34
WP_003239220.1 6006 4440 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
1.10E-48
2.00E-14
4.60E-12
1.40E-11
8.30E-07
WP_003239222.1 6773 6098 - 224PF13419
PF00702
PF13242
PF12710
HAD_2
Hydrolase
Hydrolase_like
HAD
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
3.30E-23
8.20E-18
1.50E-10
1.10E-09
WP_003239223.1 6968 9167 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.50E-75
3.20E-71
4.30E-08
WP_003239225.1 10387 9220 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme4.50E-147
WP_003239226.1 11760 10383 - 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
4.90E-64
4.30E-14
WP_010438246.1 11892 12400 + 169INFERRED GENE---
WP_003239228.1 13257 12636 - 206PF01810LysELysE type translocator1.80E-25
WP_032871671.1 13408 13957 + 182PF13302
PF13420
PF00583
PF13523
Acetyltransf_3
Acetyltransf_4
Acetyltransf_1
Acetyltransf_8
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
3.00E-16
1.20E-09
4.20E-06
4.80E-05
WP_003173940.1 15356 14408 - 315PF05368
PF13460
PF16912
PF03435
NmrA
NAD_binding_10
Glu_dehyd_C
Sacchrp_dh_NADP
NmrA-like family
NAD(P)H-binding
Glucose dehydrogenase C-terminus
Saccharopine dehydrogenase NADP binding domain
4.50E-21
1.20E-05
2.80E-04
7.50E-04
WP_003429427.1 15452 15911 + 152PF01638HxlRHxlR-like helix-turn-helix1.20E-20
WP_003239237.1 17458 15928 - 509PF03050
PF13817
PF13005
PF13007
DDE_Tnp_IS66
DDE_Tnp_IS66_C
zf-IS66
LZ_Tnp_IS66
Transposase IS66 family
IS66 C-terminal element
zinc-finger binding domain of transposase IS66
Transposase C of IS166 homeodomain
3.50E-104
7.70E-16
2.70E-13
8.00E-11

Results for WP_003031070.1 [Streptococcus anginosus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003031118.1 325153 325519 + 121PF03780Asp23Asp23 family, cell envelope-related function1.90E-33
WP_003031104.1 325521 327189 + 555PF13684
PF02734
Dak1_2
Dak2
Dihydroxyacetone kinase family
DAK2 domain
1.00E-127
1.00E-40
WP_002913966.1 327779 327986 + 69INFERRED GENE---
WP_002908843.1 327985 328264 + 93INFERRED GENE---
WP_022524424.1 328719 328884 + 54NO PFAM MATCH---
WP_080559877.1 329053 329206 + 50NO PFAM MATCH---
WP_018543632.1 329344 330292 + 315PF00881NitroreductaseNitroreductase family8.20E-15
WP_003031087.1 330291 331359 + 355NO PFAM MATCH---
WP_003031070.1 331363 332722 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_003031077.1 332762 333365 + 200PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like7.30E-11
WP_003031100.1 333361 334063 + 233PF19393DUF5968Family of unknown function (DUF5968)3.80E-20
WP_003031072.1 334083 335007 + 307PF00005
PF13304
PF03193
PF02463
ABC_tran
AAA_21
RsgA_GTPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
RecF/RecN/SMC N terminal domain
1.30E-33
7.30E-14
4.20E-05
7.50E-04
WP_003031062.1 335015 336143 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.70E-23
4.20E-18
3.10E-10
WP_003031101.1 336139 337258 + 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.40E-42
8.30E-21
7.30E-08
WP_003028449.1 337478 338366 + 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
5.80E-29
3.90E-04
WP_003025899.1 338474 338690 + 71NO PFAM MATCH---
WP_164712078.1 339055 339217 + 53NO PFAM MATCH---

Results for WP_015351797.1 [Myxococcus stipitatus DSM 14675] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015351789.1 8109883 8111002 + 372PF14351DUF4401Domain of unknown function (DUF4401)7.20E-54
WP_015351790.1 8110998 8111520 + 173PF14345GDYXXLXYGDYXXLXY protein8.00E-34
WP_015351791.1 8111613 8111868 + 84NO PFAM MATCH---
WP_015351792.1 8111864 8112695 + 276PF01126Heme_oxygenaseHeme oxygenase1.70E-29
WP_015351793.1 8113468 8112664 - 267PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
8.70E-59
2.00E-49
4.40E-10
WP_233278014.1 8115043 8113552 - 496PF00158
PF14532
PF07728
PF07724
PF00004
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
AAA
Sigma-54 interaction domain
Sigma-54 interaction domain
AAA domain (dynein-related subfamily)
AAA domain (Cdc48 subfamily)
ATPase family associated with various cellular activities (AAA)
1.30E-49
8.80E-16
5.30E-07
3.40E-04
8.10E-04
WP_233278015.1 8115642 8119047 + 1134PF00069
PF07714
PF13191
PF13424
PF03109
Pkinase
PK_Tyr_Ser-Thr
AAA_16
TPR_12
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Tetratricopeptide repeat
ABC1 atypical kinase-like domain
2.70E-42
1.60E-22
6.90E-21
5.80E-07
1.60E-04
WP_015351796.1 8119109 8119760 + 216NO PFAM MATCH---
WP_015351797.1 8119759 8121025 + 421PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-80
WP_015351798.1 8121021 8122377 + 451PF07812TfuATfuA-like protein2.50E-49
WP_044281749.1 8123323 8122423 - 299PF13649
PF08241
PF13489
PF08242
PF13847
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.70E-12
1.10E-10
5.50E-10
1.80E-08
1.60E-07
WP_169558681.1 8124488 8123399 - 362PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region1.20E-36
WP_015351801.1 8124942 8124504 - 145PF00571CBSCBS domain3.00E-26
WP_015351802.1 8125888 8125108 - 259PF02535ZipZIP Zinc transporter2.70E-33
WP_015351803.1 8127170 8125919 - 416NO PFAM MATCH---
WP_015351804.1 8127825 8127216 - 202PF13036LpoBPeptidoglycan-synthase activator LpoB1.70E-43
WP_015351805.1 8128670 8127839 - 276NO PFAM MATCH---

Results for WP_015355936.1 [Mycobacterium liflandii 128FXT] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041299256.1 3349269 3348087 - 393PF12555TPPK_CThiamine pyrophosphokinase C terminal3.60E-16
WP_015355932.1 3351180 3349434 - 581PF02463
PF13476
PF13401
PF13304
SMC_N
AAA_23
AAA_22
AAA_21
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
1.00E-14
1.50E-06
2.10E-04
4.20E-04
WP_015355933.1 3352116 3351192 - 307PF20143
PF01513
NAD_kinase_C
NAD_kinase
ATP-NAD kinase C-terminal domain
ATP-NAD kinase N-terminal domain
8.10E-36
7.60E-27
WP_011739792.1 3352958 3352112 - 281PF01728
PF01479
FtsJ
S4
FtsJ-like methyltransferase
S4 domain
4.40E-24
1.20E-08
WP_012394238.1 3353142 3352965 - 58NO PFAM MATCH---
WP_015355934.1 3354177 3353166 - 336PF18407
PF13344
PF13242
PF00702
GNAT_like
Hydrolase_6
Hydrolase_like
Hydrolase
GCN5-related N-acetyltransferase like domain
Haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
8.00E-21
9.80E-20
7.60E-16
3.00E-04
WP_193376229.1 3355013 3354179 - 277PF12688
PF14559
PF12895
TPR_5
TPR_19
ANAPC3
Tetratrico peptide repeat
Tetratricopeptide repeat
Anaphase-promoting complex, cyclosome, subunit 3
2.00E-04
2.80E-04
6.60E-04
WP_012394235.1 3355463 3355073 - 129PF05305DUF732Protein of unknown function (DUF732)1.20E-12
WP_015355936.1 3356019 3357282 + 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-59
WP_015355937.1 3357278 3358772 + 497PF07812TfuATfuA-like protein1.60E-42
WP_015355938.1 3358947 3360858 + 636PF00934PEPE family1.30E-31
WP_238559637.1 3361298 3361442 + 47PF13240
PF10571
PF12773
zinc_ribbon_2
UPF0547
DZR
zinc-ribbon domain
Uncharacterised protein family UPF0547
Double zinc ribbon
3.80E-07
4.40E-06
4.20E-05
WP_238559368.1 3361438 3363226 + 595PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.30E-05
3.10E-04
WP_015355940.1 3363567 3365430 + 620PF00934PEPE family4.10E-33
WP_015355941.1 3365486 3366788 + 433PF13808
PF01609
DDE_Tnp_1_assoc
DDE_Tnp_1
DDE_Tnp_1-associated
Transposase DDE domain
4.10E-21
1.30E-17
WP_015355942.1 3368230 3366937 - 430PF00579tRNA-synt_1btRNA synthetases class I (W and Y)4.70E-82
WP_015355943.1 3368853 3368241 - 203PF02245Pur_DNA_glycoMethylpurine-DNA glycosylase (MPG)3.90E-53

Results for WP_006507543.1 [Xenococcus sp. PCC 7305] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006507541.1 1418 89 - 442PF13546
PF01609
DDE_5
DDE_Tnp_1
DDE superfamily endonuclease
Transposase DDE domain
2.40E-37
1.50E-08
WP_006507542.1 1890 1653 - 78NO PFAM MATCH---
WP_006507543.1 2431 1870 - 186PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-06
WP_006507544.1 2701 2476 - 74NO PFAM MATCH---
WP_006507545.1 2874 3108 + 77NO PFAM MATCH---
WP_006507546.1 3753 3276 - 158PF03330DPBB_1Lytic transglycolase6.90E-27
WP_006507547.1 4153 5176 + 340PF02769
PF00586
AIRS_C
AIRS
AIR synthase related protein, C-terminal domain
AIR synthase related protein, N-terminal domain
1.50E-32
5.50E-22
WP_006507548.1 7039 5191 - 615PF00563
PF00990
PF00072
EAL
GGDEF
Response_reg
EAL domain
Diguanylate cyclase, GGDEF domain
Response regulator receiver domain
2.40E-78
2.70E-49
1.40E-26
WP_238568918.1 7344 8004 + 219PF04536TPM_phosphataseTPM domain2.50E-20
WP_006507550.1 8330 8051 - 92PF20035DUF6439Family of unknown function (DUF6439)4.20E-42
WP_006507551.1 8385 8775 + 129NO PFAM MATCH---

Results for WP_007467462.1 [Photobacterium marinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007467452.1 32273 31772 - 166PF03887YfbUYfbU domain8.30E-70
WP_007467454.1 32513 33173 + 219NO PFAM MATCH---
WP_007467456.1 34951 33196 - 584PF01268FTHFSFormate--tetrahydrofolate ligase2.30E-243
WP_007467457.1 36654 35181 - 490PF01226
PF00571
Form_Nir_trans
CBS
Formate/nitrite transporter
CBS domain
3.70E-69
5.90E-18
WP_007467458.1 36876 37782 + 301PF03466
PF00126
PF12727
LysR_substrate
HTH_1
PBP_like
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PBP superfamily domain
1.20E-41
2.10E-19
6.50E-04
WP_007467459.1 39151 38407 - 247PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.00E-30
2.20E-20
2.00E-05
WP_007467460.1 41747 39470 - 758PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.10E-206
7.10E-43
WP_007467461.1 43476 41961 - 504PF11840DUF3360Protein of unknown function (DUF3360)5.20E-264
WP_007467462.1 45698 43958 - 579PF18381
PF02624
YcaO_C
YcaO
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
2.30E-64
1.50E-62
WP_007467463.1 47834 45878 - 651PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
3.70E-43
3.60E-07
WP_007467466.1 50098 48148 - 649PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
5.20E-43
2.00E-08
WP_007467468.1 50771 52127 + 451PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.90E-34
1.70E-04
WP_007467470.1 52123 53605 + 493PF03606DcuCC4-dicarboxylate anaerobic carrier1.30E-121
WP_007467472.1 54479 55250 + 256PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
3.20E-32
2.00E-12
6.00E-07
1.90E-04
WP_007467481.1 55334 56111 + 258PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
1.40E-59
6.20E-10
WP_007467483.1 56256 56997 + 246PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.60E-21
WP_007467485.1 57000 57678 + 225PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.20E-16

Results for WP_003456833.1 [Pseudomonas furukawaii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003456847.1 4458350 4458581 + 76NO PFAM MATCH---
WP_003456845.1 4459267 4458628 - 212PF00440TetR_NBacterial regulatory proteins, tetR family1.20E-08
WP_003456843.1 4459391 4461431 + 679PF00724
PF07992
PF13450
PF03486
PF00070
Oxidored_FMN
Pyr_redox_2
NAD_binding_8
HI0933_like
Pyr_redox
NADH:flavin oxidoreductase / NADH oxidase family
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
2.50E-51
1.10E-09
5.80E-09
4.50E-06
2.70E-05
WP_003456841.1 4461482 4462790 + 435PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
8.90E-22
2.10E-08
WP_003456839.1 4462849 4463656 + 268PF00005
PF13304
PF02463
PF13476
PF13555
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
1.70E-34
2.40E-09
4.10E-07
1.40E-05
1.50E-05
WP_003456837.1 4463652 4464294 + 213PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.80E-16
WP_003456836.1 4464290 4464953 + 220PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.10E-15
WP_231992350.1 4465063 4465846 + 260PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 37.70E-29
WP_003456833.1 4466069 4468265 + 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.20E-75
1.70E-73
1.40E-07
WP_003456829.1 4468735 4470091 + 451PF01595
PF03471
PF00571
CNNM
CorC_HlyC
CBS
Cyclin M transmembrane N-terminal domain
Transporter associated domain
CBS domain
1.10E-46
4.20E-21
3.90E-12
WP_131679702.1 4470420 4471500 + 359PF07719
PF13424
PF13414
PF13432
PF13181
TPR_2
TPR_12
TPR_11
TPR_16
TPR_8
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.90E-09
5.60E-07
1.30E-06
1.40E-06
1.30E-05
WP_003456827.1 4471858 4472602 + 247PF13649
PF13847
PF08241
PF13489
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.00E-10
1.70E-08
3.20E-08
2.20E-06
1.90E-05
WP_003456825.1 4473892 4472794 - 365PF13416
PF13343
PF01547
SBP_bac_8
SBP_bac_6
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.90E-29
8.20E-17
1.30E-13
WP_003456823.1 4474753 4473928 - 274PF00795CN_hydrolaseCarbon-nitrogen hydrolase2.10E-47
WP_003456821.1 4474878 4475670 + 263PF00196
PF08281
GerE
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
1.20E-17
1.90E-04
WP_003456819.1 4477173 4476171 - 333PF13602
PF00107
PF08240
PF16912
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Glu_dehyd_C
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Glucose dehydrogenase C-terminus
1.50E-22
1.30E-17
1.90E-10
1.50E-04
WP_003456817.1 4477280 4478159 + 292PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.00E-47
6.40E-21

Results for WP_004004118.1 [Streptomyces viridochromogenes Tue57] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004004110.1 31410 30210 - 399NO PFAM MATCH---
WP_052032652.1 31503 32484 + 326PF01497Peripla_BP_2Periplasmic binding protein4.60E-14
WP_004004112.1 32588 33611 + 340PF01032FecCDFecCD transport family2.70E-68
WP_037891791.1 33607 34615 + 335PF01032FecCDFecCD transport family1.00E-67
WP_004004114.1 34632 35454 + 273PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.30E-31
1.20E-07
4.40E-05
2.00E-04
WP_004004115.1 35512 35626 + 37NO PFAM MATCH---
WP_004004116.1 35720 36542 + 273NO PFAM MATCH---
WP_004004117.1 36538 38020 + 493PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
2.60E-36
1.40E-19
WP_004004118.1 38016 39396 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-39
WP_004004119.1 39406 40531 + 374PF00881NitroreductaseNitroreductase family3.20E-06
WP_004004120.1 40527 42267 + 579PF00005
PF00664
PF02463
PF13191
PF09818
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC_ATPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
ATPase of the ABC class
1.20E-32
5.20E-15
8.70E-07
1.70E-05
4.00E-05
WP_004004121.1 42263 44006 + 580PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-26
2.30E-11
1.50E-04
3.00E-04
WP_004004122.1 44424 44112 - 103PF01022
PF12840
PF01638
PF12802
HTH_5
HTH_20
HxlR
MarR_2
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
HxlR-like helix-turn-helix
MarR family
5.40E-14
1.80E-11
5.80E-04
6.70E-04
WP_004004123.1 44804 44501 - 100NO PFAM MATCH---
WP_017945052.1 45128 45689 + 187INFERRED GENE---
WP_037891805.1 46160 45728 - 143PF19384DUF5959Family of unknown function (DUF5959)4.30E-50
WP_235193110.1 46380 46195 - 60NO PFAM MATCH---

Results for WP_009586861.1 [Acinetobacter bereziniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009586892.1 187202 187523 + 106PF00576
PF11974
Transthyretin
bMG3
HIUase/Transthyretin family
Bacterial alpha-2-macroglobulin MG3 domain
1.50E-33
9.90E-04
WP_009586877.1 187666 188389 + 240PF03502Channel_TsxNucleoside-specific channel-forming protein, Tsx2.20E-13
WP_009586935.1 189032 188537 - 164PF04115Ureidogly_lyaseUreidoglycolate lyase2.10E-46
WP_009586863.1 190044 189036 - 335PF03561AllantoicaseAllantoicase repeat9.50E-99
WP_009586874.1 190256 191414 + 385PF01494
PF13450
PF07992
PF00890
PF01134
FAD_binding_3
NAD_binding_8
Pyr_redox_2
FAD_binding_2
GIDA
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Glucose inhibited division protein A
1.40E-29
1.10E-05
1.20E-05
8.90E-05
1.70E-04
WP_199981332.1 192520 191587 - 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-28
3.30E-16
WP_009586890.1 192809 193865 + 351PF00355
PF19112
Rieske
VanA_C
Rieske [2Fe-2S] domain
Vanillate O-demethylase oxygenase C-terminal domain
1.60E-19
3.20E-17
WP_009586867.1 194984 194057 - 308PF00892EamAEamA-like transporter family4.60E-16
WP_009586861.1 195608 197813 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.40E-74
7.60E-74
1.20E-08
WP_005031638.1 198781 197899 - 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-28
9.90E-15
WP_009586931.1 198946 200464 + 505PF00171AldedhAldehyde dehydrogenase family3.30E-143
WP_009586866.1 200479 201370 + 296PF03446
PF14833
PF03807
PF02826
PF07991
NAD_binding_2
NAD_binding_11
F420_oxidored
2-Hacid_dh_C
IlvN
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Acetohydroxy acid isomeroreductase, NADPH-binding domain
5.80E-48
5.90E-37
2.80E-07
1.10E-05
2.40E-05
WP_009586902.1 201464 203126 + 553PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.60E-75
6.50E-22
WP_009586940.1 203189 204317 + 375PF00441
PF02771
PF08028
PF02770
PF11794
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
HpaB_N
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
4-hydroxyphenylacetate 3-hydroxylase N terminal
5.20E-52
4.90E-36
4.90E-31
2.70E-27
6.00E-04
WP_049044254.1 204362 205136 + 257PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
4.00E-84
3.90E-38
WP_199981333.1 205151 206177 + 341PF16113
PF00378
ECH_2
ECH_1
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.70E-96
2.20E-29
WP_009586912.1 206326 207664 + 445PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
9.90E-37
2.60E-28

Results for WP_002156867.1 [Acinetobacter nosocomialis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002040868.1 17339 16499 - 279PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.30E-55
9.10E-26
WP_002156870.1 17586 18819 + 410PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
7.70E-51
2.50E-24
1.60E-10
WP_000252463.1 18889 19348 + 152PF01047
PF12802
PF13412
PF01978
MarR
MarR_2
HTH_24
TrmB
MarR family
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
7.20E-10
6.20E-09
3.90E-05
4.80E-04
WP_081400970.1 19454 20147 + 230PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.10E-11
4.00E-11
WP_002156863.1 21135 20190 - 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
8.60E-13
1.20E-06
WP_000470071.1 22224 21147 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
3.30E-54
9.40E-19
1.30E-05
WP_002156830.1 22715 24062 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.40E-47
2.60E-24
7.30E-09
WP_002156825.1 24093 25374 + 426PF03573OprDouter membrane porin, OprD family2.70E-105
WP_002156867.1 25626 27825 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.20E-75
1.30E-72
1.80E-08
WP_002156857.1 29554 27889 - 554PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
1.20E-17
1.50E-09
2.20E-05
2.60E-05
WP_002156797.1 30476 29582 - 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
4.20E-56
6.20E-12
1.30E-08
7.50E-06
3.90E-04
WP_002051080.1 31403 30548 - 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.30E-50
1.00E-36
2.10E-11
WP_002156859.1 32935 31447 - 495PF00743
PF13738
PF13450
PF07992
PF13434
FMO-like
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
5.40E-19
2.20E-16
2.70E-11
5.60E-10
2.40E-08
WP_025467899.1 33071 34085 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.20E-39
2.50E-15
7.30E-07
WP_002156837.1 34972 34096 - 291PF04072LCMLeucine carboxyl methyltransferase6.00E-38
WP_002156822.1 36607 35083 - 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.30E-17
1.30E-13
2.10E-12
1.90E-10
2.60E-07
WP_002156874.1 37464 36630 - 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.20E-48
1.20E-41
4.30E-13

Results for WP_008164231.1 [Natronorubrum sulfidifaciens JCM 14089] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008164217.1 111528 113031 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
8.00E-141
2.20E-23
1.20E-13
2.60E-09
1.40E-05
WP_008164219.1 114707 113027 - 559PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
4.80E-87
7.60E-22
WP_008164221.1 115405 114796 - 202PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
2.90E-21
1.50E-19
8.00E-13
2.30E-07
1.80E-06
WP_049890366.1 116000 115532 - 155NO PFAM MATCH---
WP_008164225.1 117592 115996 - 531PF00474SSFSodium:solute symporter family9.00E-46
WP_008164227.1 118085 117584 - 166NO PFAM MATCH---
WP_008164229.1 118958 118478 - 159PF07883
PF02311
PF05899
Cupin_2
AraC_binding
Cupin_3
Cupin domain
AraC-like ligand binding domain
EutQ-like cupin domain
1.00E-12
1.70E-05
1.80E-04
WP_008164230.1 119140 119614 + 157PF09746MembralinTumour-associated protein3.60E-04
WP_008164231.1 121437 119673 - 587PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-49
WP_008164232.1 121682 121853 + 56NO PFAM MATCH---
WP_008164233.1 122320 121882 - 145PF01877RNA_bindingRNA binding6.20E-35
WP_008164235.1 122581 122377 - 67NO PFAM MATCH---
WP_008164237.1 122956 122659 - 98NO PFAM MATCH---
WP_008164239.1 123762 122952 - 269PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family7.20E-09
WP_008164241.1 124097 123920 - 58NO PFAM MATCH---
WP_008164243.1 125213 124208 - 334PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
3.50E-13
1.80E-09
WP_008164245.1 125566 125350 - 71NO PFAM MATCH---

Results for WP_006087920.1 [Natronorubrum tibetense GA33] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006087928.1 4005746 4007249 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.70E-141
7.80E-23
4.30E-13
4.30E-10
1.20E-06
WP_006087927.1 4008952 4007284 - 555PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
2.20E-83
1.70E-20
WP_019992088.1 4009668 4009056 - 203PF13238
PF13189
PF13207
PF02224
PF13671
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_33
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
3.90E-21
4.10E-20
1.60E-12
1.90E-08
2.20E-07
WP_006087925.1 4010189 4009715 - 157NO PFAM MATCH---
WP_006087924.1 4011805 4010185 - 539PF00474SSFSodium:solute symporter family1.10E-47
WP_006087923.1 4012313 4011797 - 171NO PFAM MATCH---
WP_006087922.1 4013103 4012623 - 159PF07883
PF02311
Cupin_2
AraC_binding
Cupin domain
AraC-like ligand binding domain
2.30E-11
2.30E-05
WP_241434244.1 4013222 4013723 + 166PF10518TAT_signalTAT (twin-arginine translocation) pathway signal sequence1.60E-04
WP_006087920.1 4015571 4013807 - 587PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-50
WP_006087919.1 4015717 4015927 + 69NO PFAM MATCH---
WP_006087918.1 4016418 4015980 - 145PF01877RNA_bindingRNA binding6.50E-34
WP_006087917.1 4016685 4016475 - 69NO PFAM MATCH---
WP_006087916.1 4017112 4016761 - 116NO PFAM MATCH---
WP_006087915.1 4017921 4017108 - 270PF04952
PF17033
AstE_AspA
Peptidase_M99
Succinylglutamate desuccinylase / Aspartoacylase family
Carboxypeptidase controlling helical cell shape catalytic
2.20E-09
4.40E-04
WP_193787775.1 4019162 4018214 - 315NO PFAM MATCH---
WP_006087913.1 4020030 4019853 - 58NO PFAM MATCH---
WP_006087912.1 4020857 4020173 - 227PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
3.10E-14
6.20E-10

Results for WP_005559575.1 [Natronococcus amylolyticus DSM 10524] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005559560.1 84220 85219 + 332PF02423
PF03807
PF01488
OCD_Mu_crystall
F420_oxidored
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
NADP oxidoreductase coenzyme F420-dependent
Shikimate / quinate 5-dehydrogenase
4.00E-63
8.40E-05
2.20E-04
WP_005559561.1 85354 86356 + 333PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
8.20E-14
3.90E-11
WP_005559563.1 86826 86376 - 149PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
1.00E-21
2.10E-11
WP_005559565.1 86963 87641 + 225PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.30E-12
2.50E-07
WP_005559566.1 87685 87859 + 57NO PFAM MATCH---
WP_005559569.1 87926 88130 + 67NO PFAM MATCH---
WP_005559571.1 88189 88627 + 145PF01877RNA_bindingRNA binding1.20E-33
WP_049892395.1 88721 89567 + 281PF01758SBFSodium Bile acid symporter family1.60E-17
WP_005559575.1 89790 91530 + 579PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-48
WP_005559577.1 92012 91520 - 163NO PFAM MATCH---
WP_005559579.1 92281 92782 + 166NO PFAM MATCH---
WP_005559581.1 92774 94373 + 532PF00474SSFSodium:solute symporter family1.80E-46
WP_005559583.1 94372 94828 + 151NO PFAM MATCH---
WP_005559585.1 94883 95495 + 203PF13238
PF13189
PF13207
PF02224
PF13671
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_33
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
1.30E-19
1.60E-17
7.70E-12
2.40E-06
1.50E-05
WP_005559587.1 96604 95575 - 342PF05544
PF02567
Pro_racemase
PhzC-PhzF
Proline racemase
Phenazine biosynthesis-like protein
2.10E-111
5.90E-05
WP_005559589.1 96895 97729 + 277PF00248Aldo_ket_redAldo/keto reductase family1.20E-55
WP_005559590.1 97808 98555 + 248NO PFAM MATCH---

Results for WP_007258935.1 [Natronolimnohabitans innermongolicus JCM 12255] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007258927.1 69244 69931 + 228PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.10E-13
2.20E-08
WP_007258928.1 70011 70185 + 57NO PFAM MATCH---
WP_007258929.1 70441 71251 + 269PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.30E-09
WP_007258930.1 71247 71598 + 116NO PFAM MATCH---
WP_007258931.1 71653 71851 + 65NO PFAM MATCH---
WP_007258932.1 71941 72418 + 158PF01877RNA_bindingRNA binding1.30E-32
WP_049889221.1 72694 72484 - 69NO PFAM MATCH---
WP_007258934.1 72883 74092 + 402PF01145Band_7SPFH domain / Band 7 family3.20E-38
WP_007258935.1 74178 75897 + 572PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-42
WP_007258936.1 76527 76035 - 163NO PFAM MATCH---
WP_007258937.1 76654 77158 + 167PF07883
PF05899
PF00190
PF03079
Cupin_2
Cupin_3
Cupin_1
ARD
Cupin domain
EutQ-like cupin domain
Cupin
ARD/ARD' family
1.60E-11
1.80E-04
3.00E-04
3.70E-04
WP_007258938.1 77310 77922 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
2.20E-21
6.00E-19
1.30E-12
5.60E-07
3.00E-06
WP_007258939.1 79556 78053 - 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.10E-140
1.30E-22
4.00E-14
4.50E-10
3.20E-06
WP_007258940.1 80017 80947 + 309PF19107DUF5794Family of unknown function (DUF5794)1.20E-51
WP_241430887.1 81945 81462 - 160PF01105EMP24_GP25Lemp24/gp25L/p24 family/GOLD4.60E-04
WP_007258942.1 82608 82377 - 76PF07754HVO_2753_ZBPSmall zinc finger protein HVO_2753-like, Zn-binding pocket5.70E-05
WP_007258944.1 83491 83035 - 151PF00072Response_regResponse regulator receiver domain3.90E-12

Results for WP_006432692.1 [Natrinema versiforme JCM 10478] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006432684.1 66670 66145 - 174PF04343DUF488Protein of unknown function, DUF4888.00E-09
WP_006432685.1 67176 66666 - 169NO PFAM MATCH---
WP_006432686.1 67472 67172 - 99NO PFAM MATCH---
WP_049891017.1 68680 67777 - 300PF19107DUF5794Family of unknown function (DUF5794)4.30E-53
WP_006432688.1 69387 70890 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
8.40E-140
3.60E-24
5.90E-14
3.60E-09
8.70E-06
WP_006432689.1 71506 70894 - 203PF13238
PF13189
PF13207
PF13521
PF02224
AAA_18
Cytidylate_kin2
AAA_17
AAA_28
Cytidylate_kin
AAA domain
Cytidylate kinase-like family
AAA domain
AAA domain
Cytidylate kinase
7.30E-20
1.60E-18
4.70E-12
7.70E-08
5.40E-07
WP_006432690.1 72165 71634 - 176PF07883
PF00190
PF01155
Cupin_2
Cupin_1
HypA
Cupin domain
Cupin
Hydrogenase/urease nickel incorporation, metallochaperone, hypA
1.60E-06
1.20E-04
5.00E-04
WP_239642068.1 72285 72834 + 182PF10518TAT_signalTAT (twin-arginine translocation) pathway signal sequence1.50E-04
WP_006432692.1 74707 72946 - 586PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-52
WP_006432693.1 76038 74799 - 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.80E-61
WP_006432694.1 77680 76210 - 489PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
4.50E-66
1.60E-10
WP_193364786.1 78306 77676 - 209PF13977
PF00440
PF16859
PF17932
PF17922
TetR_C_6
TetR_N
TetR_C_11
TetR_C_24
TetR_C_17
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
3.80E-21
6.20E-11
1.20E-05
1.10E-04
1.70E-04
WP_006432696.1 78872 78434 - 145PF01877RNA_bindingRNA binding6.10E-35
WP_006432697.1 79182 78975 - 68NO PFAM MATCH---
WP_006432698.1 79450 79273 - 58NO PFAM MATCH---
WP_006432699.1 80525 79631 - 297PF12679
PF12730
PF12698
PF13346
ABC2_membrane_2
ABC2_membrane_4
ABC2_membrane_3
ABC2_membrane_5
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 family transporter protein
2.20E-42
2.10E-07
2.70E-05
8.20E-04
WP_006432700.1 81553 80521 - 343PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
6.10E-25
2.50E-11
4.30E-06

Results for WP_008419809.1 [Natronococcus jeotgali DSM 18795] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008419792.1 24820 23815 - 334PF19107DUF5794Family of unknown function (DUF5794)7.50E-52
WP_008419794.1 25266 26766 + 499PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
7.60E-142
7.20E-22
4.60E-13
4.60E-09
2.30E-06
WP_008419797.1 28517 26807 - 569PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
2.10E-85
2.90E-21
WP_008419799.1 29648 29036 - 203PF13238
PF13189
PF13207
PF02224
PF13671
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_33
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
3.20E-20
6.10E-18
6.50E-13
6.40E-07
2.90E-06
WP_193364835.1 30178 29707 - 156NO PFAM MATCH---
WP_008419803.1 31764 30177 - 528PF00474SSFSodium:solute symporter family6.30E-44
WP_008419806.1 32257 31756 - 166NO PFAM MATCH---
WP_152424783.1 32565 33051 + 161NO PFAM MATCH---
WP_008419809.1 34775 33041 - 577PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-50
WP_008419810.1 35254 34816 - 145PF01877RNA_bindingRNA binding3.20E-33
WP_008419811.1 35510 35309 - 66NO PFAM MATCH---
WP_008419812.1 35771 35597 - 57NO PFAM MATCH---
WP_008419813.1 36496 35815 - 226PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
9.50E-13
5.80E-08
WP_008419814.1 36634 37087 + 150PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
2.60E-22
4.80E-12
WP_008419815.1 38098 37090 - 335PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
2.60E-12
2.00E-10
WP_008419816.1 39267 38268 - 332PF02423
PF01488
PF03807
OCD_Mu_crystall
Shikimate_DH
F420_oxidored
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
2.40E-61
3.90E-05
3.20E-04
WP_049892608.1 39533 39317 - 71NO PFAM MATCH---

Results for WP_006184208.1 [Natrinema pallidum DSM 3751] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006184198.1 20136 20826 + 229PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
2.30E-15
8.80E-09
WP_006184199.1 21156 20973 - 60NO PFAM MATCH---
WP_006184200.1 21318 21543 + 74PF18545HalOD1Halobacterial output domain 12.30E-21
WP_006184202.1 21809 22016 + 68NO PFAM MATCH---
WP_006184203.1 22092 22542 + 149PF01877RNA_bindingRNA binding3.60E-34
WP_006184204.1 22740 23334 + 197PF13977
PF00440
PF17932
PF17935
PF16859
TetR_C_6
TetR_N
TetR_C_24
TetR_C_27
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
6.20E-21
4.10E-11
2.10E-07
1.70E-05
2.40E-05
WP_006184205.1 23330 24770 + 479PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
5.10E-62
2.60E-08
WP_006184206.1 24915 26154 + 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family7.40E-60
WP_006184208.1 26213 27974 + 586PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.70E-50
WP_006184210.1 28605 28065 - 179NO PFAM MATCH---
WP_006184211.1 28809 29289 + 159PF07883
PF02311
PF05899
Cupin_2
AraC_binding
Cupin_3
Cupin domain
AraC-like ligand binding domain
EutQ-like cupin domain
1.60E-11
1.00E-04
8.50E-04
WP_006184212.1 29414 30026 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
1.60E-20
1.90E-18
4.90E-13
1.10E-06
3.70E-06
WP_006184213.1 31593 30090 - 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
1.80E-139
9.80E-23
9.60E-13
9.00E-09
3.50E-06
WP_049907849.1 32137 33058 + 306PF19107DUF5794Family of unknown function (DUF5794)3.00E-51
WP_006184216.1 34265 34787 + 173NO PFAM MATCH---
WP_006184217.1 35669 36368 + 232PF01027Bax1-IInhibitor of apoptosis-promoting Bax11.10E-06
WP_006184218.1 36631 37627 + 331PF02275CBAHLinear amide C-N hydrolases, choloylglycine hydrolase family1.40E-47

Results for WP_008452042.1 [Natrinema gari JCM 14663] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008452027.1 2469 3159 + 229PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.20E-15
1.70E-08
WP_008452030.1 3488 3305 - 60NO PFAM MATCH---
WP_008452031.1 3650 3875 + 74PF18545HalOD1Halobacterial output domain 15.20E-20
WP_008452033.1 4182 4383 + 66NO PFAM MATCH---
WP_008452035.1 4459 4909 + 149PF01877RNA_bindingRNA binding1.40E-34
WP_008452036.1 5103 5697 + 197PF13977
PF00440
PF17932
PF17935
PF16859
TetR_C_6
TetR_N
TetR_C_24
TetR_C_27
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
2.40E-21
4.00E-11
1.10E-07
1.40E-05
4.00E-05
WP_008452038.1 5693 7169 + 491PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
1.90E-62
2.40E-08
WP_006823930.1 7314 7737 + 141INFERRED GENE---
WP_008452042.1 7774 9535 + 586PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-49
WP_008452044.1 10165 9625 - 179NO PFAM MATCH---
WP_008452045.1 10330 10810 + 159PF07883
PF02311
PF05899
Cupin_2
AraC_binding
Cupin_3
Cupin domain
AraC-like ligand binding domain
EutQ-like cupin domain
3.60E-11
3.30E-04
9.10E-04
WP_008452047.1 10958 11570 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
8.30E-21
7.90E-19
6.60E-13
1.30E-06
2.30E-06
WP_008452048.1 13140 11637 - 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
2.10E-139
6.70E-23
5.40E-13
8.40E-09
3.80E-06
WP_008452053.1 13684 14605 + 306PF19107DUF5794Family of unknown function (DUF5794)5.30E-52
WP_008452056.1 16249 15223 - 341NO PFAM MATCH---
WP_008452057.1 16661 17723 + 353PF12483GIDEE3 Ubiquitin ligase2.00E-09
WP_008452058.1 18567 17856 - 236PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
2.40E-07
1.10E-06
8.30E-05

Results for WP_007109730.1 [Natrinema altunense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007109738.1 38807 38342 - 154PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
3.50E-23
3.90E-11
WP_007109737.1 38960 39638 + 225PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.50E-15
5.90E-09
WP_007109736.1 39907 40132 + 74PF18545HalOD1Halobacterial output domain 11.40E-20
WP_007109735.1 40433 40640 + 68NO PFAM MATCH---
WP_007109734.1 40716 41166 + 149PF01877RNA_bindingRNA binding2.40E-34
WP_007109733.1 41363 41957 + 197PF13977
PF00440
PF17932
PF17935
PF16859
TetR_C_6
TetR_N
TetR_C_24
TetR_C_27
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
8.00E-20
4.10E-11
3.60E-07
1.70E-05
2.70E-05
WP_007109732.1 41953 43426 + 490PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
1.80E-61
1.10E-08
WP_007109731.1 43571 44810 + 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family6.40E-60
WP_007109730.1 44876 46637 + 586PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.60E-50
WP_007109729.1 47266 46726 - 179NO PFAM MATCH---
WP_007109728.1 47431 47911 + 159PF07883
PF02311
PF05899
Cupin_2
AraC_binding
Cupin_3
Cupin domain
AraC-like ligand binding domain
EutQ-like cupin domain
2.10E-12
9.00E-05
4.10E-04
WP_007109727.1 48056 48668 + 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
5.60E-21
2.00E-18
2.50E-13
5.70E-07
1.10E-06
WP_049900551.1 48992 49502 + 169NO PFAM MATCH---
WP_007109725.1 49494 51081 + 528PF00474SSFSodium:solute symporter family1.30E-45
WP_049900548.1 51162 51624 + 153NO PFAM MATCH---
WP_007109723.1 51696 53340 + 547PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.80E-83
1.60E-20
WP_007109722.1 54869 53366 - 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
7.00E-139
6.70E-23
6.00E-13
1.10E-08
3.10E-06

Results for WP_006651907.1 [Natrialba hulunbeirensis JCM 10989] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006651899.1 18936 19341 + 134PF10025DUF2267Uncharacterized conserved protein (DUF2267)2.00E-14
WP_006651900.1 20258 19526 - 243PF00583
PF13420
PF13508
PF13302
PF13673
Acetyltransf_1
Acetyltransf_4
Acetyltransf_7
Acetyltransf_3
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.30E-13
1.50E-10
2.40E-06
7.10E-06
4.40E-05
WP_241431465.1 20440 20917 + 158NO PFAM MATCH---
WP_160166248.1 21909 22233 + 107NO PFAM MATCH---
WP_006651903.1 24579 23409 - 389PF19107DUF5794Family of unknown function (DUF5794)3.20E-52
WP_006651904.1 25099 26602 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
3.40E-141
4.60E-23
8.70E-14
9.60E-10
8.80E-06
WP_006651905.1 27134 26648 - 161PF07883
PF02311
Cupin_2
AraC_binding
Cupin domain
AraC-like ligand binding domain
8.20E-11
3.50E-05
WP_006651906.1 27238 27796 + 185NO PFAM MATCH---
WP_006651907.1 29755 27928 - 608PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-52
WP_006651908.1 30986 29825 - 386PF01145
PF13421
Band_7
Band_7_1
SPFH domain / Band 7 family
SPFH domain-Band 7 family
7.00E-39
5.30E-04
WP_006651909.1 32406 31164 - 413PF01025
PF02601
PF05557
PF10186
GrpE
Exonuc_VII_L
MAD
ATG14
GrpE
Exonuclease VII, large subunit
Mitotic checkpoint protein
Vacuolar sorting 38 and autophagy-related subunit 14
1.70E-42
1.10E-04
1.20E-04
9.90E-04
WP_006651910.1 32544 34233 + 562PF04851
PF16203
PF00271
PF18458
PF00270
ResIII
ERCC3_RAD25_C
Helicase_C
XPB_DRD
DEAD
Type III restriction enzyme, res subunit
ERCC3/RAD25/XPB C-terminal helicase
Helicase conserved C-terminal domain
Xeroderma pigmentosum group B helicase damage recognition domain
DEAD/DEAH box helicase
5.60E-26
1.30E-14
8.00E-14
3.30E-10
9.70E-07
WP_006651911.1 34512 34239 - 90PF18545HalOD1Halobacterial output domain 12.20E-16
WP_006651912.1 35918 34745 - 390PF13360
PF13570
PF01011
PQQ_2
PQQ_3
PQQ
PQQ-like domain
PQQ-like domain
PQQ enzyme repeat
1.50E-39
8.70E-32
5.10E-18
WP_241431469.1 36925 36067 - 285PF00924MS_channelMechanosensitive ion channel8.50E-43
WP_006651914.1 37063 38596 + 510PF05626DUF790Protein of unknown function (DUF790)7.50E-139
WP_006651915.1 38668 39376 + 235NO PFAM MATCH---

Results for WP_006824434.1 [Natrialba taiwanensis DSM 12281] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006824427.1 70414 69703 - 236NO PFAM MATCH---
WP_006824428.1 72142 70561 - 526PF05626DUF790Protein of unknown function (DUF790)8.00E-136
WP_006824429.1 72244 73132 + 295PF00924MS_channelMechanosensitive ion channel5.50E-44
WP_006824430.1 73304 73604 + 99NO PFAM MATCH---
WP_049914987.1 75439 73774 - 554PF04851
PF16203
PF00271
PF18458
PF00270
ResIII
ERCC3_RAD25_C
Helicase_C
XPB_DRD
DEAD
Type III restriction enzyme, res subunit
ERCC3/RAD25/XPB C-terminal helicase
Helicase conserved C-terminal domain
Xeroderma pigmentosum group B helicase damage recognition domain
DEAD/DEAH box helicase
1.10E-25
4.00E-15
2.10E-14
7.70E-12
7.40E-07
WP_006824432.1 75546 76029 + 160PF03364Polyketide_cycPolyketide cyclase / dehydrase and lipid transport1.00E-04
WP_006824433.1 76237 77506 + 422PF01025
PF07544
PF05557
PF02601
PF12329
GrpE
Med9
MAD
Exonuc_VII_L
TMF_DNA_bd
GrpE
RNA polymerase II transcription mediator complex subunit 9
Mitotic checkpoint protein
Exonuclease VII, large subunit
TATA element modulatory factor 1 DNA binding
2.30E-42
3.30E-05
5.00E-05
5.40E-05
3.30E-04
WP_006108726.1 77678 78937 + 419INFERRED GENE---
WP_006824434.1 78986 80840 + 617PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-47
WP_239640912.1 81338 80849 - 162NO PFAM MATCH---
WP_006824436.1 81455 81941 + 161PF07883Cupin_2Cupin domain2.10E-10
WP_006824437.1 83447 81944 - 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.30E-139
3.00E-23
3.00E-13
2.40E-10
2.90E-05
WP_049914988.1 83922 85011 + 362PF19107DUF5794Family of unknown function (DUF5794)9.30E-52
WP_049914989.1 86234 86417 + 60NO PFAM MATCH---
WP_006824440.1 87582 87207 - 124PF03631Virul_fac_BrkBVirulence factor BrkB7.30E-06
WP_006824441.1 87788 88217 + 142PF08753
PF01402
NikR_C
RHH_1
NikR C terminal nickel binding domain
Ribbon-helix-helix protein, copG family
1.60E-21
2.90E-06
WP_006824443.1 88774 89719 + 314PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
2.60E-42
2.00E-10

Results for WP_006167023.1 [Natrialba chahannaoensis JCM 10990] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006167015.1 108954 107775 - 392PF08438
PF01926
PF02824
PF02421
MMR_HSR1_C
MMR_HSR1
TGS
FeoB_N
GTPase of unknown function C-terminal
50S ribosome-binding GTPase
TGS domain
Ferrous iron transport protein B
1.90E-27
5.30E-20
3.10E-11
7.40E-10
WP_006167016.1 109162 109573 + 136PF10025DUF2267Uncharacterized conserved protein (DUF2267)1.60E-31
WP_006167017.1 110554 109822 - 243PF00583
PF13420
PF13508
PF13302
PF13673
Acetyltransf_1
Acetyltransf_4
Acetyltransf_7
Acetyltransf_3
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.20E-14
3.40E-11
1.40E-06
6.40E-06
8.30E-05
WP_049896570.1 110736 111213 + 158NO PFAM MATCH---
WP_006167019.1 114953 113732 - 406PF19107DUF5794Family of unknown function (DUF5794)2.10E-52
WP_006167020.1 115473 116976 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
9.10E-142
1.00E-23
2.00E-14
9.70E-10
8.10E-06
WP_049896562.1 117542 117068 - 157PF07883Cupin_2Cupin domain1.20E-09
WP_006167022.1 117646 118174 + 175NO PFAM MATCH---
WP_006167023.1 120148 118303 - 614PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-51
WP_006167024.1 121379 120218 - 386PF01145
PF13421
Band_7
Band_7_1
SPFH domain / Band 7 family
SPFH domain-Band 7 family
8.80E-39
4.10E-04
WP_006167025.1 122864 121637 - 408PF01025
PF02601
PF15905
GrpE
Exonuc_VII_L
HMMR_N
GrpE
Exonuclease VII, large subunit
Hyaluronan mediated motility receptor N-terminal
3.00E-42
4.40E-05
8.80E-04
WP_006167026.1 123025 124642 + 538PF04851
PF16203
PF00271
PF18458
PF00270
ResIII
ERCC3_RAD25_C
Helicase_C
XPB_DRD
DEAD
Type III restriction enzyme, res subunit
ERCC3/RAD25/XPB C-terminal helicase
Helicase conserved C-terminal domain
Xeroderma pigmentosum group B helicase damage recognition domain
DEAD/DEAH box helicase
1.10E-25
1.10E-15
1.10E-13
1.70E-10
1.10E-06
WP_006167027.1 124926 124653 - 90PF18545HalOD1Halobacterial output domain 19.50E-17
WP_241431907.1 126078 125193 - 294PF00924MS_channelMechanosensitive ion channel1.00E-42
WP_006167029.1 126189 127722 + 510PF05626DUF790Protein of unknown function (DUF790)6.10E-140
WP_006167030.1 127794 128502 + 235NO PFAM MATCH---
WP_006167031.1 128655 128835 + 59NO PFAM MATCH---

Results for WP_006108725.1 [Natrialba asiatica DSM 12278] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006108718.1 352905 352698 - 68PF00313CSD'Cold-shock' DNA-binding domain4.30E-17
WP_083860903.1 353201 353471 + 89NO PFAM MATCH---
WP_049904514.1 354040 353698 - 113PF19102DUF5789Family of unknown function (DUF5789)2.50E-05
WP_006110750.1 354114 354463 + 116INFERRED GENE---
WP_169331453.1 355982 354893 - 362PF19107DUF5794Family of unknown function (DUF5794)1.80E-51
WP_006108722.1 356457 357960 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.30E-141
2.70E-23
6.10E-15
6.10E-10
2.90E-05
WP_006108723.1 358456 357970 - 161PF07883Cupin_2Cupin domain3.20E-10
WP_241434668.1 358573 359062 + 162NO PFAM MATCH---
WP_006108725.1 360899 359069 - 609PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-48
WP_006108726.1 362127 360948 - 392PF01145Band_7SPFH domain / Band 7 family1.60E-38
WP_006108727.1 363590 362297 - 430PF01025
PF05557
PF02601
PF07544
PF17060
GrpE
MAD
Exonuc_VII_L
Med9
MPS2
GrpE
Mitotic checkpoint protein
Exonuclease VII, large subunit
RNA polymerase II transcription mediator complex subunit 9
Monopolar spindle protein 2
1.00E-42
1.10E-05
3.40E-05
3.80E-05
1.10E-04
WP_006108728.1 364284 363801 - 160PF03364Polyketide_cycPolyketide cyclase / dehydrase and lipid transport5.10E-04
WP_049904515.1 364389 365946 + 518PF04851
PF16203
PF00271
PF18458
PF00270
ResIII
ERCC3_RAD25_C
Helicase_C
XPB_DRD
DEAD
Type III restriction enzyme, res subunit
ERCC3/RAD25/XPB C-terminal helicase
Helicase conserved C-terminal domain
Xeroderma pigmentosum group B helicase damage recognition domain
DEAD/DEAH box helicase
2.60E-25
2.60E-17
4.80E-14
4.60E-12
9.60E-07
WP_006108730.1 366327 366123 - 67NO PFAM MATCH---
WP_006108731.1 367498 366610 - 295PF00924MS_channelMechanosensitive ion channel1.40E-43
WP_049904534.1 367600 369190 + 529PF05626DUF790Protein of unknown function (DUF790)2.20E-134
WP_006108733.1 369335 370046 + 236NO PFAM MATCH---

Results for WP_006666432.1 [Natrialba aegyptia DSM 13077] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006666423.1 154720 155803 + 360PF13495
PF02899
PF00589
PF13102
Phage_int_SAM_4
Phage_int_SAM_1
Phage_integrase
Phage_int_SAM_5
Phage integrase, N-terminal SAM-like domain
Phage integrase, N-terminal SAM-like domain
Phage integrase family
Phage integrase SAM-like domain
2.60E-09
2.30E-08
3.10E-06
7.60E-05
WP_086009654.1 156901 155873 - 342PF13358
PF13592
PF13565
DDE_3
HTH_33
HTH_32
DDE superfamily endonuclease
Winged helix-turn helix
Homeodomain-like domain
3.10E-31
2.10E-17
4.70E-09
WP_152424063.1 157240 158086 + 281NO PFAM MATCH---
WP_006666427.1 158085 158700 + 204NO PFAM MATCH---
WP_162832070.1 160202 159113 - 362PF19107DUF5794Family of unknown function (DUF5794)1.60E-51
WP_006666429.1 160677 162180 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.70E-141
2.80E-23
6.10E-15
3.40E-10
1.30E-05
WP_006666430.1 162669 162183 - 161PF07883Cupin_2Cupin domain5.70E-10
WP_241433835.1 162786 163275 + 162NO PFAM MATCH---
WP_006666432.1 165129 163284 - 614PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_049903745.1 166357 165178 - 392PF01145
PF13421
Band_7
Band_7_1
SPFH domain / Band 7 family
SPFH domain-Band 7 family
1.70E-38
7.60E-04
WP_006666434.1 167786 166529 - 418PF01025
PF07544
PF08614
PF05557
PF00038
GrpE
Med9
ATG16
MAD
Filament
GrpE
RNA polymerase II transcription mediator complex subunit 9
Autophagy protein 16 (ATG16)
Mitotic checkpoint protein
Intermediate filament protein
1.10E-42
3.20E-05
9.80E-05
1.60E-04
2.30E-04
WP_006666435.1 168477 167994 - 160PF03364Polyketide_cycPolyketide cyclase / dehydrase and lipid transport9.80E-05
WP_049903747.1 168584 170243 + 552PF04851
PF16203
PF00271
PF18458
PF00270
ResIII
ERCC3_RAD25_C
Helicase_C
XPB_DRD
DEAD
Type III restriction enzyme, res subunit
ERCC3/RAD25/XPB C-terminal helicase
Helicase conserved C-terminal domain
Xeroderma pigmentosum group B helicase damage recognition domain
DEAD/DEAH box helicase
2.90E-25
4.30E-15
2.20E-14
3.50E-12
3.30E-07
WP_006666438.1 171777 170889 - 295PF00924MS_channelMechanosensitive ion channel3.50E-44
WP_006666439.1 171879 173460 + 526PF05626DUF790Protein of unknown function (DUF790)5.50E-137
WP_006666440.1 173630 174341 + 236NO PFAM MATCH---
WP_006666441.1 174977 174425 - 183PF13636Methyltranf_PUARNA-binding PUA-like domain of methyltransferase RsmF4.10E-11

Results for WP_007700811.1 [Halovivax asiaticus JCM 14624] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049907207.1 120717 119109 - 535PF02776
PF00205
PF02775
TPP_enzyme_N
TPP_enzyme_M
TPP_enzyme_C
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
3.90E-49
2.10E-33
3.20E-32
WP_007700790.1 121454 122504 + 349PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.70E-28
9.80E-12
1.80E-04
WP_007700793.1 122500 123280 + 259NO PFAM MATCH---
WP_007700797.1 123535 123337 - 65NO PFAM MATCH---
WP_007700800.1 123757 124630 + 290NO PFAM MATCH---
WP_007700803.1 124626 125520 + 297PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
4.80E-25
1.90E-10
3.00E-07
WP_049907170.1 126148 127063 + 304PF00881NitroreductaseNitroreductase family1.60E-16
WP_007700808.1 127059 128145 + 361PF00899ThiFThiF family4.00E-05
WP_007700811.1 128179 129460 + 426PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-61
WP_241430175.1 130162 129565 - 198PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.80E-13
WP_007700816.1 132063 130977 - 361PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
7.80E-48
9.20E-39
WP_007700819.1 133208 132059 - 382PF00676
PF02775
PF13292
E1_dh
TPP_enzyme_C
DXP_synthase_N
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
1-deoxy-D-xylulose-5-phosphate synthase
1.50E-68
2.60E-06
1.50E-05
WP_007700822.1 133820 134408 + 195NO PFAM MATCH---
WP_007700825.1 134838 135093 + 84NO PFAM MATCH---
WP_007700828.1 135297 136020 + 240PF02592Vut_1Putative vitamin uptake transporter2.10E-48
WP_007700830.1 136109 137204 + 364PF02073Peptidase_M29Thermophilic metalloprotease (M29)1.10E-58
WP_007700833.1 137288 137438 + 49PF01020
PF13240
Ribosomal_L40e
zinc_ribbon_2
Ribosomal L40e family
zinc-ribbon domain
1.20E-06
5.60E-04

Results for WP_007696639.1 [Halovivax asiaticus JCM 14624] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007696618.1 22058 21839 - 72NO PFAM MATCH---
WP_007696620.1 22244 22865 + 206PF00127Copper-bindCopper binding proteins, plastocyanin/azurin family1.90E-07
WP_007696622.1 24686 23309 - 458PF07992
PF01266
PF01494
PF12831
PF03486
Pyr_redox_2
DAO
FAD_binding_3
FAD_oxidored
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
FAD dependent oxidoreductase
HI0933-like protein
2.00E-10
2.10E-10
8.60E-09
4.80E-06
1.40E-05
WP_049907037.1 24821 25610 + 262PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.60E-47
4.10E-30
WP_007696629.1 25714 26233 + 172NO PFAM MATCH---
WP_241430145.1 26304 27276 + 323PF01368
PF02272
DHH
DHHA1
DHH family
DHHA1 domain
9.30E-12
1.40E-10
WP_007696633.1 27443 27635 + 63NO PFAM MATCH---
WP_007696635.1 27725 28163 + 145PF01877RNA_bindingRNA binding4.90E-30
WP_007696639.1 28261 29995 + 577PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-51
WP_007696641.1 30453 30042 - 136NO PFAM MATCH---
WP_007696642.1 32078 30575 - 500PF00478
PF00571
PF03060
PF01070
PF01645
IMPDH
CBS
NMO
FMN_dh
Glu_synthase
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Conserved region in glutamate synthase
3.20E-139
9.20E-22
1.20E-13
5.20E-09
5.10E-05
WP_007696643.1 32405 33332 + 308PF19107DUF5794Family of unknown function (DUF5794)4.20E-50
WP_152415775.1 34032 33579 - 150NO PFAM MATCH---
WP_007696644.1 34549 34771 + 73NO PFAM MATCH---
WP_007696645.1 36204 35793 - 136PF07790Pilin_NArchaeal Type IV pilin, N-terminal1.70E-16
WP_007696647.1 36920 37544 + 207NO PFAM MATCH---
WP_152415776.1 38096 37685 - 136NO PFAM MATCH---

Results for WP_008895170.1 [Haloterrigena salina JCM 13891] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008895162.1 51992 53495 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
1.50E-141
2.70E-24
1.10E-13
7.30E-10
7.90E-06
WP_008895163.1 55245 53568 - 558PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
3.40E-80
2.30E-23
WP_008895164.1 55971 55359 - 203PF13238
PF13189
PF13207
PF13521
PF02224
AAA_18
Cytidylate_kin2
AAA_17
AAA_28
Cytidylate_kin
AAA domain
Cytidylate kinase-like family
AAA domain
AAA domain
Cytidylate kinase
1.40E-21
4.10E-20
7.80E-13
8.80E-08
1.20E-07
WP_008895165.1 56592 56058 - 177NO PFAM MATCH---
WP_008895166.1 58166 56588 - 525PF00474SSFSodium:solute symporter family1.40E-47
WP_049914548.1 58674 58158 - 171NO PFAM MATCH---
WP_012943115.1 58939 59516 + 192INFERRED GENE---
WP_008895169.1 59636 60164 + 175NO PFAM MATCH---
WP_008895170.1 62092 60319 - 590PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.50E-51
WP_008895171.1 63299 62153 - 381PF01145Band_7SPFH domain / Band 7 family1.20E-37
WP_008895172.1 64674 63441 - 410PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.30E-60
WP_008895173.1 66292 64840 - 483PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
5.90E-63
4.60E-10
WP_049914549.1 66931 66292 - 212PF13977
PF17932
PF00440
PF17933
PF16925
TetR_C_6
TetR_C_24
TetR_N
TetR_C_25
TetR_C_13
BetI-type transcriptional repressor, C-terminal
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
9.90E-20
5.00E-06
6.10E-06
1.40E-04
1.60E-04
WP_008452036.1 66950 67091 + 47INFERRED GENE---
WP_008895174.1 68133 67680 - 150PF01877RNA_bindingRNA binding6.20E-34
WP_008895175.1 68398 68191 - 68NO PFAM MATCH---
WP_008895176.1 68785 68437 - 115NO PFAM MATCH---

Results for WP_008012214.1 [Haloterrigena limicola JCM 13563] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008012201.1 211925 211034 - 296PF19107DUF5794Family of unknown function (DUF5794)2.20E-53
WP_008012204.1 212423 213926 + 500PF00478
PF00571
PF03060
PF01070
PF00977
IMPDH
CBS
NMO
FMN_dh
His_biosynth
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Histidine biosynthesis protein
3.10E-141
7.20E-24
9.80E-14
1.10E-09
9.40E-06
WP_008012206.1 215596 213952 - 547PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.20E-88
4.70E-21
WP_008012208.1 216178 215662 - 171NO PFAM MATCH---
WP_008012210.1 217771 216184 - 528PF00474SSFSodium:solute symporter family4.90E-45
WP_008012211.1 218276 217763 - 170NO PFAM MATCH---
WP_008012212.1 219374 218762 - 203PF13238
PF13189
PF13207
PF02224
PF13521
AAA_18
Cytidylate_kin2
AAA_17
Cytidylate_kin
AAA_28
AAA domain
Cytidylate kinase-like family
AAA domain
Cytidylate kinase
AAA domain
7.30E-22
3.30E-19
1.00E-13
5.60E-07
1.30E-06
WP_152418193.1 219751 220243 + 163NO PFAM MATCH---
WP_008012214.1 222060 220296 - 587PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.40E-49
WP_008012215.1 223364 222125 - 412PF00999Na_H_ExchangerSodium/hydrogen exchanger family2.40E-58
WP_008012216.1 225036 223581 - 484PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
6.70E-64
5.40E-10
WP_008012217.1 225671 225032 - 212PF13977
PF00440
PF17932
PF17933
PF16859
TetR_C_6
TetR_N
TetR_C_24
TetR_C_25
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
1.60E-21
1.90E-11
2.40E-07
8.70E-05
1.40E-04
WP_008012218.1 226402 225952 - 149PF01877RNA_bindingRNA binding5.20E-34
WP_008012220.1 226669 226465 - 67NO PFAM MATCH---
WP_008012221.1 227656 226966 - 229PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.90E-16
2.30E-09
WP_008012223.1 227808 228273 + 154PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
1.10E-23
3.00E-12
WP_008012226.1 229283 228284 - 332PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
1.50E-11
3.10E-10

Results for WP_006883946.1 [Halosimplex carlsbadense 2-9-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006883938.1 6963 6687 - 91PF01329Pterin_4aPterin 4 alpha carbinolamine dehydratase7.30E-24
WP_006883939.1 8504 7178 - 441PF05201
PF01488
PF00745
PF03807
PF03446
GlutR_N
Shikimate_DH
GlutR_dimer
F420_oxidored
NAD_binding_2
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.70E-34
2.10E-31
7.80E-22
4.30E-05
2.80E-04
WP_006883940.1 9169 8500 - 222PF13241
PF14824
NAD_binding_7
Sirohm_synth_M
Putative NAD(P)-binding
Sirohaem biosynthesis protein central
9.50E-24
4.30E-06
WP_006883941.1 10251 9195 - 351PF17805AsnC_trans_reg2AsnC-like ligand binding domain1.60E-45
WP_006883942.1 10878 10320 - 185NO PFAM MATCH---
WP_006883943.1 11609 11006 - 200PF04191
PF01222
PF06966
PEMT
ERG4_ERG24
DUF1295
Phospholipid methyltransferase
Ergosterol biosynthesis ERG4/ERG24 family
Protein of unknown function (DUF1295)
2.00E-15
3.20E-05
4.60E-05
WP_006883944.1 13047 11772 - 424PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
8.70E-151
7.20E-12
1.60E-07
WP_006883945.1 13259 14075 + 271PF19138DUF5821Family of unknown function (DUF5821)9.30E-89
WP_006883946.1 14199 15939 + 579PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-48
WP_161625187.1 16116 16272 + 51NO PFAM MATCH---
WP_006883947.1 17496 16362 - 377PF01889DUF63Membrane protein of unknown function DUF635.60E-35
WP_049930482.1 18419 17588 - 276PF00459Inositol_PInositol monophosphatase family2.00E-43
WP_006883949.1 20469 18489 - 659PF03453
PF00994
PF12727
PF03454
PF12849
MoeA_N
MoCF_biosynth
PBP_like
MoeA_C
PBP_like_2
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
PBP superfamily domain
MoeA C-terminal region (domain IV)
PBP superfamily domain
1.70E-38
3.90E-26
5.10E-24
7.60E-12
2.20E-04
WP_006883950.1 21728 20465 - 420PF03453
PF00994
PF03454
MoeA_N
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
1.20E-28
1.30E-11
5.60E-07
WP_006883951.1 21846 22200 + 117PF00011HSP20Hsp20/alpha crystallin family5.70E-08
WP_006883952.1 22208 23867 + 552PF03109
PF01636
PF00069
ABC1
APH
Pkinase
ABC1 atypical kinase-like domain
Phosphotransferase enzyme family
Protein kinase domain
1.10E-71
4.90E-04
6.50E-04
WP_006883953.1 23966 25043 + 358PF00155
PF00266
PF01053
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Aminotransferase class I and II
Aminotransferase class-V
Cys/Met metabolism PLP-dependent enzyme
1.70E-40
2.10E-05
3.50E-05

Results for WP_007345319.1 [Halorubrum terrestre JCM 10247] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007345313.1 71089 72748 + 552PF13185
PF02518
PF00512
PF01590
PF13426
GAF_2
HATPase_c
HisKA
GAF
PAS_9
GAF domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
PAS domain
1.80E-16
7.30E-16
9.10E-12
1.10E-06
5.60E-06
WP_007345314.1 74477 72755 - 573PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
8.40E-80
1.30E-56
WP_007345315.1 75432 74922 - 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
1.50E-34
3.60E-05
WP_007345316.1 76496 75494 - 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
7.20E-57
4.00E-06
WP_004597118.1 76866 76596 - 89NO PFAM MATCH---
WP_007345317.1 77461 77050 - 136PF11255DUF3054Protein of unknown function (DUF3054)9.60E-23
WP_007345318.1 78783 77535 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.20E-148
3.70E-07
1.30E-05
WP_004597121.1 79069 79891 + 273PF19138DUF5821Family of unknown function (DUF5821)6.60E-94
WP_007345319.1 79997 81689 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-53
WP_007345320.1 81788 82127 + 112PF07883
PF02311
PF00190
PF07847
Cupin_2
AraC_binding
Cupin_1
PCO_ADO
Cupin domain
AraC-like ligand binding domain
Cupin
PCO_ADO
3.30E-18
1.60E-08
8.00E-05
5.70E-04
WP_004597124.1 82324 83602 + 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
6.70E-148
6.30E-14
1.10E-07
1.20E-05
1.50E-04
WP_007345321.1 83837 84431 + 197PF00072Response_regResponse regulator receiver domain4.40E-10
WP_004597126.1 84667 84499 - 55NO PFAM MATCH---
WP_007345322.1 84780 85881 + 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.10E-72
WP_007345323.1 85974 87216 + 413PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
1.40E-30
4.90E-16
1.50E-14
WP_007345324.1 87265 88123 + 285NO PFAM MATCH---
WP_007345325.1 88882 88132 - 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.10E-23

Results for WP_006630354.1 [Halorubrum tebenquichense DSM 14210] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006630346.1 4268 5018 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.50E-25
WP_006630347.1 5882 5027 - 284NO PFAM MATCH---
WP_006630348.1 7223 5960 - 420PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
3.60E-31
4.30E-17
7.00E-13
WP_006630349.1 8421 7320 - 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family8.40E-71
WP_006630350.1 8534 8696 + 53NO PFAM MATCH---
WP_006630351.1 9402 8805 - 198PF00072Response_regResponse regulator receiver domain6.70E-10
WP_006630352.1 10931 9653 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
3.30E-148
1.90E-13
5.40E-07
3.70E-05
2.00E-04
WP_006630353.1 11378 11045 - 110PF07883
PF02311
PF00190
PF12852
Cupin_2
AraC_binding
Cupin_1
Cupin_6
Cupin domain
AraC-like ligand binding domain
Cupin
Cupin
4.40E-20
2.00E-08
4.60E-07
7.50E-04
WP_006630354.1 13146 11454 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-54
WP_006630355.1 14147 13325 - 273PF19138DUF5821Family of unknown function (DUF5821)1.00E-91
WP_006630356.1 14388 15636 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.50E-148
4.90E-07
1.30E-05
WP_006630357.1 15736 16147 + 136PF11255DUF3054Protein of unknown function (DUF3054)4.70E-23
WP_006630358.1 16389 16635 + 81NO PFAM MATCH---
WP_006630359.1 16693 17695 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
1.50E-55
1.80E-04
WP_006630360.1 17763 18273 + 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
2.60E-33
7.10E-06
WP_006630361.1 18366 18612 + 81PF04014
PF15937
MazE_antitoxin
PrlF_antitoxin
Antidote-toxin recognition MazE, bacterial antitoxin
prlF antitoxin for toxin YhaV_toxin
2.80E-09
2.10E-06
WP_006630362.1 18611 19040 + 142PF01850PINPIN domain8.20E-16

Results for WP_008383215.1 [Halogeometricum pallidum JCM 14848] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008383204.1 141406 140920 - 161PF03745DUF309Domain of unknown function (DUF309)3.80E-14
WP_049916625.1 141508 141751 + 80NO PFAM MATCH---
WP_008383207.1 142570 142285 - 94NO PFAM MATCH---
WP_008383209.1 143261 142622 - 212PF08745PIN_5PINc domain ribonuclease1.50E-67
WP_008383210.1 144042 143775 - 88NO PFAM MATCH---
WP_008383212.1 144224 144674 + 149PF13412
PF13404
PF01037
PF12840
PF01047
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
3.50E-18
8.20E-18
8.50E-18
2.60E-08
2.00E-06
WP_049916626.1 144749 145889 + 379PF01889DUF63Membrane protein of unknown function DUF632.10E-37
WP_152421575.1 146131 145921 - 69PF05907
PF00935
CXXC_Zn-b_euk
Ribosomal_L44
CXXC motif containing zinc binding protein, eukaryotic
Ribosomal protein L44
3.20E-04
6.20E-04
WP_008383215.1 148027 146314 - 570PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.20E-51
WP_049916628.1 148943 148118 - 274PF19138DUF5821Family of unknown function (DUF5821)1.90E-97
WP_008383218.1 151226 149159 - 688NO PFAM MATCH---
WP_008383220.1 151423 152671 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.30E-149
3.80E-11
1.50E-06
WP_008383223.1 152827 153721 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
6.90E-68
2.00E-37
WP_008383225.1 153976 153742 - 77NO PFAM MATCH---
WP_008383226.1 154725 154017 - 235NO PFAM MATCH---
WP_008383228.1 154822 154969 + 48NO PFAM MATCH---
WP_008383229.1 155341 155638 + 98PF03551PadRTranscriptional regulator PadR-like family1.10E-17

Results for WP_006112882.1 [Halorubrum coriense DSM 10284] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006112882.1 29 1721 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-53
WP_006112883.1 1816 2155 + 112PF07883
PF02311
PF00190
PF12852
Cupin_2
AraC_binding
Cupin_1
Cupin_6
Cupin domain
AraC-like ligand binding domain
Cupin
Cupin
8.80E-20
3.10E-09
1.70E-05
5.10E-04
WP_006112884.1 2292 3570 + 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
2.30E-149
2.70E-12
1.70E-07
1.70E-06
1.90E-04
WP_006112885.1 3862 4435 + 190PF00072Response_regResponse regulator receiver domain1.80E-09
WP_006112886.1 4656 4494 - 53NO PFAM MATCH---
WP_006112887.1 4769 5885 + 371PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family3.70E-70
WP_006112888.1 5977 7231 + 417PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
7.40E-31
1.00E-16
2.80E-15
WP_006112889.1 7318 8128 + 269NO PFAM MATCH---
WP_006112890.1 8885 8135 - 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.30E-22

Results for WP_004046919.1 [Halorubrum saccharovorum DSM 1137] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004046911.1 138115 139234 + 372PF13197DUF4013Protein of unknown function (DUF4013)7.70E-19
WP_004046912.1 139259 140327 + 355PF03463
PF03465
PF03464
eRF1_1
eRF1_3
eRF1_2
eRF1 domain 1
eRF1 domain 3
eRF1 domain 2
1.60E-28
2.40E-25
2.90E-08
WP_004046913.1 140405 140798 + 130NO PFAM MATCH---
WP_004046914.1 141872 140873 - 332PF02423
PF01488
PF03807
OCD_Mu_crystall
Shikimate_DH
F420_oxidored
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
2.90E-58
8.80E-08
5.20E-04
WP_004046915.1 142227 141948 - 92NO PFAM MATCH---
WP_004046916.1 142904 142493 - 136PF11255DUF3054Protein of unknown function (DUF3054)4.90E-25
WP_004046917.1 144228 142980 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.70E-148
7.40E-08
6.00E-06
WP_004046918.1 144496 145312 + 271PF19138DUF5821Family of unknown function (DUF5821)2.40E-93
WP_004046919.1 145397 147089 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-53
WP_004046920.1 147169 147508 + 112PF07883
PF02311
PF00190
Cupin_2
AraC_binding
Cupin_1
Cupin domain
AraC-like ligand binding domain
Cupin
2.10E-18
3.40E-09
1.20E-04
C471_RS17950 147941 148307 + 122INFERRED GENE---
WP_008007390.1 148408 149047 + 213INFERRED GENE---
WP_004046921.1 149176 150013 + 278PF06745ATPaseKaiC1.30E-06
WP_004046922.1 150129 151098 + 322PF04513
PF14712
PF06825
PF01519
Baculo_PEP_C
Snapin_Pallidin
HSBP1
DUF16
Baculovirus polyhedron envelope protein, PEP, C terminus
Snapin/Pallidin
Heat shock factor binding protein 1
Protein of unknown function DUF16
4.20E-05
7.00E-05
8.50E-05
1.60E-04
WP_004046923.1 151094 151904 + 269NO PFAM MATCH---
WP_004046924.1 151991 153116 + 374PF16983MFS_MOT1Molybdate transporter of MFS superfamily8.80E-38
WP_004046925.1 154443 153360 - 360PF00266Aminotran_5Aminotransferase class-V5.20E-13

Results for WP_008441436.1 [Halorubrum sp. GN11GM_10-3_MGM] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008441411.1 33200 33950 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.00E-24
WP_008441412.1 34802 33959 - 280NO PFAM MATCH---
WP_049905518.1 36049 34948 - 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.30E-69
WP_008441430.1 36162 36324 + 53NO PFAM MATCH---
WP_008441432.1 37626 36387 - 412PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
1.20E-23
5.50E-20
WP_008441433.1 38467 37873 - 197PF00072Response_regResponse regulator receiver domain1.80E-11
WP_008441434.1 40076 38798 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
3.10E-149
1.20E-11
1.50E-07
4.10E-06
1.60E-04
WP_008441435.1 40548 40209 - 112PF07883
PF02311
PF07847
PF00190
Cupin_2
AraC_binding
PCO_ADO
Cupin_1
Cupin domain
AraC-like ligand binding domain
PCO_ADO
Cupin
2.70E-17
6.70E-09
1.70E-04
6.80E-04
WP_008441436.1 42335 40643 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-53
WP_008441437.1 43271 42452 - 272PF19138DUF5821Family of unknown function (DUF5821)1.30E-93
WP_008441438.1 43511 44759 + 415PF00464
PF01212
PF00155
SHMT
Beta_elim_lyase
Aminotran_1_2
Serine hydroxymethyltransferase
Beta-eliminating lyase
Aminotransferase class I and II
5.70E-147
2.90E-04
3.30E-04
WP_008441439.1 44856 45267 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.70E-22
WP_008441440.1 45449 45692 + 80NO PFAM MATCH---
WP_008441441.1 45750 46752 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
2.50E-56
5.60E-05
WP_008441442.1 46788 47298 + 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
5.50E-34
8.80E-07
WP_008441444.1 47390 47636 + 81PF04014
PF15937
MazE_antitoxin
PrlF_antitoxin
Antidote-toxin recognition MazE, bacterial antitoxin
prlF antitoxin for toxin YhaV_toxin
8.80E-08
2.60E-05
WP_008441445.1 47635 48064 + 142PF01850PINPIN domain2.40E-17

Results for WP_004597122.1 [Halorubrum distributum JCM 10118] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004597130.1 4357 5107 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.30E-23
WP_004597129.1 5965 5116 - 282NO PFAM MATCH---
WP_004597128.1 7283 6038 - 414PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
1.00E-30
5.30E-16
1.80E-14
WP_004597127.1 8477 7376 - 366PF00724
PF01207
Oxidored_FMN
Dus
NADH:flavin oxidoreductase / NADH oxidase family
Dihydrouridine synthase (Dus)
2.50E-72
6.40E-04
WP_004597126.1 8590 8758 + 55NO PFAM MATCH---
WP_049908370.1 9420 8826 - 197PF00072Response_regResponse regulator receiver domain8.40E-10
WP_004597124.1 10933 9655 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
6.70E-148
6.30E-14
1.10E-07
1.20E-05
1.50E-04
WP_004597123.1 11480 11141 - 112PF07883
PF02311
PF00190
PF07847
Cupin_2
AraC_binding
Cupin_1
PCO_ADO
Cupin domain
AraC-like ligand binding domain
Cupin
PCO_ADO
2.40E-18
2.30E-08
9.40E-06
4.60E-04
WP_004597122.1 13271 11579 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-52
WP_004597121.1 14199 13377 - 273PF19138DUF5821Family of unknown function (DUF5821)6.60E-94
WP_004597120.1 14485 15733 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.50E-148
4.30E-07
6.90E-06
WP_004597119.1 15807 16218 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.10E-22
WP_004597118.1 16402 16672 + 89NO PFAM MATCH---
WP_004597117.1 16772 17774 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
1.30E-56
3.90E-06
WP_004597116.1 18210 17865 - 114NO PFAM MATCH---
WP_160163045.1 18696 18531 - 54NO PFAM MATCH---
WP_049908369.1 18834 19278 + 147NO PFAM MATCH---

Results for WP_008584529.1 [Halorubrum sp. 1-13-28] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008584546.1 1610277 1611027 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.90E-26
WP_008584544.1 1611897 1611036 - 286NO PFAM MATCH---
WP_008584542.1 1613235 1611975 - 419PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
9.20E-32
6.30E-17
2.90E-13
WP_008584539.1 1614441 1613340 - 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family3.00E-69
WP_008584537.1 1614554 1614716 + 53NO PFAM MATCH---
WP_008584535.1 1615422 1614825 - 198PF00072Response_regResponse regulator receiver domain1.00E-10
WP_008584533.1 1616951 1615673 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
4.90E-149
7.10E-12
4.00E-08
4.80E-06
1.60E-04
WP_008584531.1 1617397 1617064 - 110PF07883
PF02311
PF00190
PF12852
Cupin_2
AraC_binding
Cupin_1
Cupin_6
Cupin domain
AraC-like ligand binding domain
Cupin
Cupin
7.90E-20
1.60E-09
5.00E-07
3.50E-04
WP_008584529.1 1619165 1617473 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-54
WP_251106142.1 1620204 1619382 - 273PF19138DUF5821Family of unknown function (DUF5821)9.50E-92
WP_008584525.1 1620516 1621764 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
8.40E-149
7.80E-07
1.10E-05
WP_008584523.1 1621864 1622275 + 136PF11255DUF3054Protein of unknown function (DUF3054)1.50E-22
WP_008584521.1 1622508 1622754 + 81NO PFAM MATCH---
WP_008584519.1 1622812 1623814 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
3.20E-57
2.50E-05
WP_008584517.1 1623878 1624406 + 175PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
1.30E-31
7.10E-06
WP_008584515.1 1624488 1626210 + 573PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
1.10E-80
1.30E-56
WP_008584513.1 1627875 1626285 - 529PF13185
PF02518
PF00512
PF00989
PF08448
GAF_2
HATPase_c
HisKA
PAS
PAS_4
GAF domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS fold
PAS fold
4.60E-17
2.30E-15
2.80E-14
7.60E-08
4.70E-07

Results for WP_008576223.1 [Haloferax sp. ATCC BAA-644] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008576210.1 78209 78590 + 126PF19137DUF5820Family of unknown function (DUF5820)3.20E-53
WP_004061267.1 78614 79064 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061266.1 80018 79151 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_008576215.1 80624 80138 - 161PF03745DUF309Domain of unknown function (DUF309)9.10E-16
WP_004044672.1 81953 81683 - 89NO PFAM MATCH---
WP_008576219.1 82044 82842 + 265PF00459Inositol_PInositol monophosphatase family6.40E-49
WP_004044674.1 82928 83399 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_008576221.1 83533 84652 + 372PF01889DUF63Membrane protein of unknown function DUF632.70E-36
WP_008576223.1 86578 84889 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.00E-56
WP_004061260.1 87455 86627 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_008576225.1 87821 89069 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.50E-153
4.70E-09
2.00E-05
WP_008576226.1 89168 89468 + 99PF02680DUF211Uncharacterized ArCR, COG18883.90E-33
WP_008576227.1 89467 90037 + 189PF01988VIT1VIT family6.20E-09
WP_008576228.1 90136 91030 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.50E-67
6.40E-37
WP_008576229.1 91343 91109 - 77NO PFAM MATCH---
WP_008576230.1 92112 91401 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.40E-04
WP_004061251.1 92255 92402 + 48NO PFAM MATCH---

Results for WP_004597122.1 [Halorubrum distributum JCM 10118] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004597130.1 4357 5107 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.30E-23
WP_004597129.1 5965 5116 - 282NO PFAM MATCH---
WP_004597128.1 7283 6038 - 414PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
1.00E-30
5.30E-16
1.80E-14
WP_004597127.1 8477 7376 - 366PF00724
PF01207
Oxidored_FMN
Dus
NADH:flavin oxidoreductase / NADH oxidase family
Dihydrouridine synthase (Dus)
2.50E-72
6.40E-04
WP_004597126.1 8590 8758 + 55NO PFAM MATCH---
WP_049908370.1 9420 8826 - 197PF00072Response_regResponse regulator receiver domain8.40E-10
WP_004597124.1 10933 9655 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
6.70E-148
6.30E-14
1.10E-07
1.20E-05
1.50E-04
WP_004597123.1 11480 11141 - 112PF07883
PF02311
PF00190
PF07847
Cupin_2
AraC_binding
Cupin_1
PCO_ADO
Cupin domain
AraC-like ligand binding domain
Cupin
PCO_ADO
2.40E-18
2.30E-08
9.40E-06
4.60E-04
WP_004597122.1 13271 11579 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-52
WP_004597121.1 14199 13377 - 273PF19138DUF5821Family of unknown function (DUF5821)6.60E-94
WP_004597120.1 14485 15733 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.50E-148
4.30E-07
6.90E-06
WP_004597119.1 15807 16218 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.10E-22
WP_004597118.1 16402 16672 + 89NO PFAM MATCH---
WP_004597117.1 16772 17774 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
1.30E-56
3.90E-06
WP_004597116.1 18210 17865 - 114NO PFAM MATCH---
WP_160163045.1 18696 18531 - 54NO PFAM MATCH---
WP_049908369.1 18834 19278 + 147NO PFAM MATCH---

Results for WP_008576223.1 [Haloferax sp. ATCC BAA-644] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008576210.1 78209 78590 + 126PF19137DUF5820Family of unknown function (DUF5820)3.20E-53
WP_004061267.1 78614 79064 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061266.1 80018 79151 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_008576215.1 80624 80138 - 161PF03745DUF309Domain of unknown function (DUF309)9.10E-16
WP_004044672.1 81953 81683 - 89NO PFAM MATCH---
WP_008576219.1 82044 82842 + 265PF00459Inositol_PInositol monophosphatase family6.40E-49
WP_004044674.1 82928 83399 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_008576221.1 83533 84652 + 372PF01889DUF63Membrane protein of unknown function DUF632.70E-36
WP_008576223.1 86578 84889 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.00E-56
WP_004061260.1 87455 86627 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_008576225.1 87821 89069 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.50E-153
4.70E-09
2.00E-05
WP_008576226.1 89168 89468 + 99PF02680DUF211Uncharacterized ArCR, COG18883.90E-33
WP_008576227.1 89467 90037 + 189PF01988VIT1VIT family6.20E-09
WP_008576228.1 90136 91030 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.50E-67
6.40E-37
WP_008576229.1 91343 91109 - 77NO PFAM MATCH---
WP_008576230.1 92112 91401 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.40E-04
WP_004061251.1 92255 92402 + 48NO PFAM MATCH---

Results for WP_008576223.1 [Haloferax sp. ATCC BAA-644] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008576210.1 78209 78590 + 126PF19137DUF5820Family of unknown function (DUF5820)3.20E-53
WP_004061267.1 78614 79064 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061266.1 80018 79151 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_008576215.1 80624 80138 - 161PF03745DUF309Domain of unknown function (DUF309)9.10E-16
WP_004044672.1 81953 81683 - 89NO PFAM MATCH---
WP_008576219.1 82044 82842 + 265PF00459Inositol_PInositol monophosphatase family6.40E-49
WP_004044674.1 82928 83399 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_008576221.1 83533 84652 + 372PF01889DUF63Membrane protein of unknown function DUF632.70E-36
WP_008576223.1 86578 84889 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.00E-56
WP_004061260.1 87455 86627 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_008576225.1 87821 89069 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.50E-153
4.70E-09
2.00E-05
WP_008576226.1 89168 89468 + 99PF02680DUF211Uncharacterized ArCR, COG18883.90E-33
WP_008576227.1 89467 90037 + 189PF01988VIT1VIT family6.20E-09
WP_008576228.1 90136 91030 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.50E-67
6.40E-37
WP_008576229.1 91343 91109 - 77NO PFAM MATCH---
WP_008576230.1 92112 91401 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.40E-04
WP_004061251.1 92255 92402 + 48NO PFAM MATCH---

Results for WP_008094868.1 [Haloferax prahovense DSM 18310] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008094859.1 50080 50791 + 236NO PFAM MATCH---
WP_008094860.1 50833 51067 + 77NO PFAM MATCH---
WP_008094862.1 51598 51091 - 168PF00293NUDIXNUDIX domain3.30E-15
WP_008094863.1 52501 51607 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.50E-67
1.10E-36
WP_008094864.1 53170 52600 - 189PF01988VIT1VIT family9.60E-09
WP_008094865.1 53469 53169 - 99PF02680DUF211Uncharacterized ArCR, COG18883.70E-33
WP_008094866.1 54816 53568 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
3.90E-152
1.10E-08
1.20E-05
WP_049913562.1 55182 56010 + 275PF19138DUF5821Family of unknown function (DUF5821)7.70E-96
WP_008094868.1 56059 57748 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-55
WP_008094869.1 59082 57963 - 372PF01889DUF63Membrane protein of unknown function DUF633.00E-36
WP_004974414.1 59689 59218 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.60E-08
3.10E-07
WP_008094871.1 60581 59783 - 265PF00459Inositol_PInositol monophosphatase family6.70E-48
WP_008094873.1 60672 60942 + 89NO PFAM MATCH---
WP_008094875.1 62464 61804 - 219PF03824NicOHigh-affinity nickel-transport protein3.60E-04
WP_008094876.1 62721 62532 - 62NO PFAM MATCH---
WP_008094877.1 62810 63296 + 161PF03745DUF309Domain of unknown function (DUF309)1.60E-15
WP_008094878.1 63416 64277 + 286PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.50E-11

Results for WP_004061261.1 [Haloferax lucentense DSM 14919] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004061251.1 24544 24397 - 48NO PFAM MATCH---
WP_004061254.1 24688 25399 + 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.50E-04
WP_004061255.1 25457 25691 + 77NO PFAM MATCH---
WP_004044681.1 26666 25772 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_004044680.1 27335 26765 - 189PF01988VIT1VIT family2.90E-09
WP_004044679.1 27634 27334 - 99PF02680DUF211Uncharacterized ArCR, COG18884.80E-34
WP_004061258.1 28980 27732 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.50E-153
5.80E-09
6.20E-06
WP_004061260.1 29346 30174 + 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_004061261.1 30223 31912 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-57
WP_004061262.1 33246 32127 - 372PF01889DUF63Membrane protein of unknown function DUF631.30E-36
WP_004061263.1 33851 33380 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.20E-16
1.90E-15
5.70E-08
4.80E-07
WP_004061264.1 34764 33966 - 265PF00459Inositol_PInositol monophosphatase family1.60E-48
WP_004061265.1 34855 35125 + 89NO PFAM MATCH---
WP_004044671.1 36183 36669 + 161PF03745DUF309Domain of unknown function (DUF309)1.90E-15
WP_004061266.1 36788 37655 + 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_004061267.1 38192 37742 - 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061268.1 38597 38216 - 126PF19137DUF5820Family of unknown function (DUF5820)6.60E-54

Results for WP_007543633.1 [Haloferax larsenii JCM 13917] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007543615.1 714915 714042 - 290PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.10E-10
WP_007543618.1 715502 715016 - 161PF03745DUF309Domain of unknown function (DUF309)2.40E-14
WP_049918784.1 715592 715772 + 59NO PFAM MATCH---
WP_007543621.1 715901 716561 + 219PF03824NicOHigh-affinity nickel-transport protein3.80E-04
WP_007543626.1 717758 717473 - 94NO PFAM MATCH---
WP_007543628.1 717924 718719 + 264PF00459Inositol_PInositol monophosphatase family3.90E-47
WP_007543630.1 718800 719271 + 156PF13412
PF13404
PF01037
PF12840
PF12802
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR_2
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.50E-16
8.40E-16
8.90E-08
1.40E-06
WP_007543631.1 719355 720495 + 379PF01889DUF63Membrane protein of unknown function DUF637.40E-40
WP_007543633.1 722380 720691 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-54
WP_007543635.1 723262 722431 - 276PF19138DUF5821Family of unknown function (DUF5821)1.90E-97
WP_007543636.1 723642 724890 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
7.50E-153
1.40E-09
1.90E-05
WP_049918785.1 724997 725537 + 179NO PFAM MATCH---
WP_007543638.1 725598 725898 + 99PF02680DUF211Uncharacterized ArCR, COG18882.20E-35
WP_007543639.1 725894 726470 + 191PF01988VIT1VIT family4.10E-09
WP_007543640.1 726575 727469 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.90E-68
4.80E-37
WP_241429866.1 727598 727985 + 128PF00293NUDIXNUDIX domain7.50E-16
WP_007543642.1 728241 728007 - 77NO PFAM MATCH---

Results for WP_008325148.1 [Haloferax elongans ATCC BAA-1513] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008325133.1 85968 86202 + 77NO PFAM MATCH---
WP_008325136.1 86788 86293 - 164PF00293NUDIXNUDIX domain2.40E-15
WP_008325138.1 87701 86807 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
8.30E-68
7.80E-37
WP_008325139.1 88382 87806 - 191PF01988VIT1VIT family3.90E-09
WP_008325143.1 88678 88378 - 99PF02680DUF211Uncharacterized ArCR, COG18887.00E-35
WP_241430776.1 89189 88739 - 149NO PFAM MATCH---
WP_008325146.1 90634 89386 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.30E-152
1.20E-09
1.20E-05
WP_008325147.1 91016 91847 + 276PF19138DUF5821Family of unknown function (DUF5821)1.10E-97
WP_008325148.1 91898 93587 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-55
WP_008325149.1 94923 93783 - 379PF01889DUF63Membrane protein of unknown function DUF635.30E-40
WP_008325150.1 95478 95007 - 156PF13412
PF13404
PF01037
PF12840
PF12802
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR_2
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.50E-16
8.40E-16
8.90E-08
1.40E-06
WP_008325151.1 96354 95559 - 264PF00459Inositol_PInositol monophosphatase family7.20E-47
WP_008325152.1 96501 96780 + 92NO PFAM MATCH---
WP_008325155.1 97870 98356 + 161PF03745DUF309Domain of unknown function (DUF309)2.50E-14
WP_008325158.1 98457 99330 + 290PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-10
WP_008325160.1 100008 99372 - 211PF13419
PF12710
PF13242
PF00702
HAD_2
HAD
Hydrolase_like
Hydrolase
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
2.60E-17
1.40E-09
2.60E-09
3.70E-09
WP_008325161.1 100559 100109 - 149PF03684UPF0179Uncharacterised protein family (UPF0179)1.30E-47

Results for WP_004974409.1 [Haloferax sp. Atlit-4N] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_050459805.1 72581 73292 + 236NO PFAM MATCH---
WP_004974397.1 73334 73568 + 77NO PFAM MATCH---
WP_004974399.1 74105 73592 - 170PF00293NUDIXNUDIX domain2.30E-15
WP_004974400.1 75008 74114 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
1.10E-36
WP_004974402.1 75677 75107 - 189PF01988VIT1VIT family1.00E-08
WP_004974404.1 75976 75676 - 99PF02680DUF211Uncharacterized ArCR, COG18886.70E-34
WP_004974406.1 77319 76071 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
7.90E-153
1.10E-08
8.60E-06
WP_049905040.1 77685 78513 + 275PF19138DUF5821Family of unknown function (DUF5821)8.10E-96
WP_004974409.1 78562 80251 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-56
WP_004974411.1 81587 80468 - 372PF01889DUF63Membrane protein of unknown function DUF639.30E-37
WP_004974414.1 82210 81739 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.60E-08
3.10E-07
WP_115804985.1 83101 82303 - 265PF00459Inositol_PInositol monophosphatase family6.40E-49
WP_050459798.1 83192 83462 + 89NO PFAM MATCH---
WP_115804986.1 85013 84353 - 219PF03824NicOHigh-affinity nickel-transport protein1.60E-04
WP_049905042.1 85270 85081 - 62NO PFAM MATCH---
WP_115804987.1 85359 85845 + 161PF03745DUF309Domain of unknown function (DUF309)1.60E-15
WP_004974426.1 85965 86826 + 286PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.90E-11

Results for WP_006601557.1 [Haloferax alexandrinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_144858766.1 3582536 3582917 + 126PF19137DUF5820Family of unknown function (DUF5820)2.80E-53
WP_004061267.1 3582941 3583391 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061266.1 3584345 3583478 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_115802769.1 3584950 3584464 - 161PF03745DUF309Domain of unknown function (DUF309)2.00E-15
WP_004061265.1 3586279 3586009 - 89NO PFAM MATCH---
WP_004061264.1 3586370 3587168 + 265PF00459Inositol_PInositol monophosphatase family1.60E-48
WP_004061263.1 3587283 3587754 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.20E-16
1.90E-15
5.70E-08
4.80E-07
WP_006601556.1 3587888 3589007 + 372PF01889DUF63Membrane protein of unknown function DUF635.70E-36
WP_006601557.1 3590911 3589222 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-57
WP_004061260.1 3591788 3590960 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_004061258.1 3592154 3593402 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.50E-153
5.80E-09
6.20E-06
WP_004044679.1 3593500 3593800 + 99PF02680DUF211Uncharacterized ArCR, COG18884.80E-34
WP_006601559.1 3593799 3594369 + 189PF01988VIT1VIT family1.00E-08
WP_004044681.1 3594468 3595362 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_006601560.1 3595677 3595443 - 77NO PFAM MATCH---
WP_163489565.1 3596446 3595735 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.60E-04
WP_004061251.1 3596590 3596737 + 48NO PFAM MATCH---

Results for WP_008320634.1 [Haloferax mucosum ATCC BAA-1512] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008320626.1 273689 274139 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)9.60E-48
WP_008320627.1 274292 274928 + 211PF13419
PF13242
PF00702
PF12710
HAD_2
Hydrolase_like
Hydrolase
HAD
Haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.90E-13
2.00E-08
2.40E-08
1.50E-07
WP_008320628.1 275810 274955 - 284PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-11
WP_008320629.1 276380 275894 - 161PF03745DUF309Domain of unknown function (DUF309)1.30E-15
WP_241432036.1 277739 277406 - 110NO PFAM MATCH---
WP_008320631.1 277787 278585 + 265PF00459Inositol_PInositol monophosphatase family3.90E-47
WP_008320632.1 278702 279173 + 156PF13412
PF13404
PF01037
PF12840
PF12802
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
MarR_2
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.20E-16
1.30E-16
1.50E-14
5.30E-08
1.40E-06
WP_008320633.1 279295 280435 + 379PF01889DUF63Membrane protein of unknown function DUF633.90E-38
WP_008320634.1 282286 280600 - 561PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-54
WP_008320635.1 283175 282347 - 275PF19138DUF5821Family of unknown function (DUF5821)7.40E-94
WP_008320636.1 283542 284790 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.50E-151
1.10E-08
2.20E-05
WP_008320637.1 284901 285513 + 203NO PFAM MATCH---
WP_008320640.1 285598 285898 + 99PF02680DUF211Uncharacterized ArCR, COG18882.30E-33
WP_008320641.1 285894 286470 + 191PF01988VIT1VIT family1.50E-10
WP_008320642.1 286574 287468 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.10E-68
1.50E-37
WP_008320643.1 287483 287990 + 168PF00293NUDIXNUDIX domain6.40E-16
WP_049915742.1 288464 288230 - 77NO PFAM MATCH---

Results for WP_007273281.1 [Haloferax sulfurifontis ATCC BAA-897] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007273274.1 66291 66741 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)4.60E-48
WP_007273275.1 67698 66831 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family5.10E-10
WP_007273276.1 68304 67818 - 161PF03745DUF309Domain of unknown function (DUF309)1.70E-15
WP_007273277.1 68393 68582 + 62NO PFAM MATCH---
WP_007273278.1 69911 69641 - 89NO PFAM MATCH---
WP_007273279.1 70002 70800 + 265PF00459Inositol_PInositol monophosphatase family3.80E-48
WP_004044674.1 70896 71367 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_007273280.1 71485 72604 + 372PF01889DUF63Membrane protein of unknown function DUF632.60E-36
WP_007273281.1 74532 72843 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-56
WP_049920349.1 75409 74581 - 275PF19138DUF5821Family of unknown function (DUF5821)1.20E-95
WP_007273283.1 75775 77023 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.00E-152
1.00E-09
1.50E-05
WP_007273284.1 77129 77429 + 99PF02680DUF211Uncharacterized ArCR, COG18883.00E-33
WP_007273285.1 77428 77998 + 189PF01988VIT1VIT family1.20E-10
WP_007273286.1 78097 78991 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
2.90E-36
WP_007273287.1 78996 79509 + 170PF00293NUDIXNUDIX domain3.70E-16
WP_007273288.1 79771 79537 - 77NO PFAM MATCH---
WP_007273289.1 80541 79830 - 236NO PFAM MATCH---

Results for WP_004518091.1 [Haloarcula vallismortis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004518083.1 73837 73690 - 48NO PFAM MATCH---
WP_004518084.1 73896 74616 + 239NO PFAM MATCH---
WP_004518085.1 75101 74618 - 160PF00293NUDIXNUDIX domain1.50E-13
WP_004518086.1 75995 75101 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.00E-67
3.10E-35
WP_004518087.1 76667 76070 - 198NO PFAM MATCH---
WP_004518088.1 77995 76747 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
3.70E-150
1.90E-07
3.40E-05
WP_004518089.1 78146 80234 + 695NO PFAM MATCH---
WP_004518090.1 80604 81423 + 272PF19138DUF5821Family of unknown function (DUF5821)1.80E-97
WP_004518091.1 81454 83164 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-47
WP_004518092.1 84337 83188 - 382PF01889DUF63Membrane protein of unknown function DUF634.40E-34
WP_004518093.1 85272 84432 - 279PF00459Inositol_PInositol monophosphatase family2.10E-46
WP_004518094.1 85545 85344 - 66NO PFAM MATCH---
WP_004518095.1 86442 87660 + 405PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
7.80E-22
6.90E-04
WP_004518096.1 88614 87687 - 308PF18884TSP3_bacBacterial TSP3 repeat1.00E-09
WP_004518097.1 88890 90333 + 480PF01882DUF58Protein of unknown function DUF581.10E-20
WP_004518098.1 90329 90833 + 167NO PFAM MATCH---
WP_004518099.1 90829 91783 + 317NO PFAM MATCH---

Results for WP_004969309.1 [Haloferax denitrificans ATCC 35960] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004969298.1 70920 71631 + 236NO PFAM MATCH---
WP_004969300.1 71690 71924 + 77NO PFAM MATCH---
WP_004969302.1 72474 71961 - 170PF00293NUDIXNUDIX domain2.50E-16
WP_004044681.1 73373 72479 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_004969303.1 74042 73472 - 189PF01988VIT1VIT family3.30E-10
WP_004969306.1 74341 74041 - 99PF02680DUF211Uncharacterized ArCR, COG18881.10E-33
WP_004969307.1 75701 74453 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
6.70E-153
3.20E-09
1.30E-05
WP_004969308.1 76067 76895 + 275PF19138DUF5821Family of unknown function (DUF5821)1.20E-95
WP_004969309.1 76944 78633 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-56
WP_004969310.1 79989 78870 - 372PF01889DUF63Membrane protein of unknown function DUF634.00E-36
WP_004969311.1 80578 80107 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.60E-15
5.60E-08
6.20E-07
WP_004969312.1 81471 80673 - 265PF00459Inositol_PInositol monophosphatase family1.20E-48
WP_004969313.1 81562 81832 + 89NO PFAM MATCH---
WP_049917949.1 83038 82849 - 62NO PFAM MATCH---
WP_004969315.1 83126 83612 + 161PF03745DUF309Domain of unknown function (DUF309)1.60E-15
WP_004969316.1 83732 84599 + 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family8.70E-11
WP_004969317.1 85139 84689 - 149PF03684UPF0179Uncharacterised protein family (UPF0179)4.90E-48

Results for WP_007190306.1 [Haloarcula californiae ATCC 33799] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007190300.1 58920 57966 - 317NO PFAM MATCH---
WP_049944748.1 59417 58916 - 166NO PFAM MATCH---
WP_007190302.1 60859 59413 - 481PF01882DUF58Protein of unknown function DUF584.90E-21
WP_007190303.1 61231 62074 + 280PF18884TSP3_bacBacterial TSP3 repeat5.30E-12
WP_007190304.1 63319 62101 - 405PF00535Glycos_transf_2Glycosyl transferase family 21.80E-20
WP_004518094.1 64210 64411 + 66NO PFAM MATCH---
WP_007190305.1 64483 65323 + 279PF00459Inositol_PInositol monophosphatase family1.00E-46
WP_004961153.1 65418 66567 + 382PF01889DUF63Membrane protein of unknown function DUF632.90E-34
WP_007190306.1 68292 66582 - 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-47
WP_004961158.1 69142 68323 - 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_007190307.1 71608 69520 - 695NO PFAM MATCH---
WP_004961161.1 71761 73009 + 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
1.50E-150
7.40E-07
WP_007190308.1 73084 73675 + 196NO PFAM MATCH---
WP_007190309.1 73750 74644 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
6.10E-68
3.30E-35
WP_007190310.1 74644 75127 + 160PF00293NUDIXNUDIX domain1.70E-12
WP_004961169.1 75850 75130 - 239NO PFAM MATCH---
WP_004961170.1 75909 76056 + 48NO PFAM MATCH---

Results for WP_004961155.1 [Haloarcula sinaiiensis ATCC 33800] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961141.1 1028772 1027818 - 317NO PFAM MATCH---
WP_004961143.1 1029269 1028768 - 166NO PFAM MATCH---
WP_004961145.1 1030711 1029265 - 481PF01882DUF58Protein of unknown function DUF581.60E-20
WP_004961147.1 1031083 1031926 + 280PF18884TSP3_bacBacterial TSP3 repeat5.30E-12
WP_004961149.1 1033171 1031953 - 405PF00535Glycos_transf_2Glycosyl transferase family 21.80E-20
WP_004518094.1 1034062 1034263 + 66NO PFAM MATCH---
WP_004961151.1 1034335 1035175 + 279PF00459Inositol_PInositol monophosphatase family5.50E-47
WP_004961153.1 1035270 1036419 + 382PF01889DUF63Membrane protein of unknown function DUF632.90E-34
WP_004961155.1 1038144 1036434 - 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-47
WP_004961158.1 1038994 1038175 - 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_004961159.1 1041460 1039372 - 695NO PFAM MATCH---
WP_004961161.1 1041613 1042861 + 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
1.50E-150
7.40E-07
WP_004961164.1 1042936 1043527 + 196NO PFAM MATCH---
WP_004961165.1 1043602 1044496 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.50E-67
2.70E-35
WP_004961167.1 1044496 1044979 + 160PF00293NUDIXNUDIX domain1.00E-12
WP_004961169.1 1045702 1044982 - 239NO PFAM MATCH---
WP_004961170.1 1045761 1045908 + 48NO PFAM MATCH---

Results for WP_008309019.1 [Haloarcula amylolytica JCM 13557] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008309001.1 187939 187321 - 205NO PFAM MATCH---
WP_008309003.1 188732 188231 - 166NO PFAM MATCH---
WP_008309005.1 190174 188728 - 481PF01882DUF58Protein of unknown function DUF581.30E-20
WP_008309006.1 190400 191387 + 328PF18884TSP3_bacBacterial TSP3 repeat6.50E-13
WP_008309008.1 192630 191415 - 404PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
2.80E-22
2.00E-04
WP_004518094.1 193524 193725 + 66NO PFAM MATCH---
WP_008309016.1 193797 194637 + 279PF00459Inositol_PInositol monophosphatase family2.30E-46
WP_008309018.1 194739 195888 + 382PF01889DUF63Membrane protein of unknown function DUF632.40E-34
WP_008309019.1 197640 195930 - 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-48
WP_008309020.1 198490 197671 - 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_008309022.1 200949 198861 - 695NO PFAM MATCH---
WP_008309023.1 201102 202350 + 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
6.80E-151
7.90E-08
WP_008309024.1 202433 203024 + 196NO PFAM MATCH---
WP_008309025.1 203099 203993 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.90E-67
1.80E-35
WP_008309026.1 203993 204476 + 160PF00293NUDIXNUDIX domain1.90E-14
WP_008309027.1 205201 204481 - 239NO PFAM MATCH---
WP_004961170.1 205260 205407 + 48NO PFAM MATCH---

Results for WP_004592619.1 [Haloarcula japonica DSM 6131] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004592601.1 5502 4545 - 318NO PFAM MATCH---
WP_004592603.1 6002 5498 - 167NO PFAM MATCH---
WP_004592604.1 7444 5998 - 481PF01882DUF58Protein of unknown function DUF581.20E-20
WP_004592605.1 7725 8670 + 314PF18884TSP3_bacBacterial TSP3 repeat1.50E-10
WP_004592606.1 9884 8666 - 405PF00535Glycos_transf_2Glycosyl transferase family 21.90E-21
WP_004592607.1 10778 10979 + 66NO PFAM MATCH---
WP_004592608.1 11051 11885 + 277PF00459Inositol_PInositol monophosphatase family2.00E-46
WP_004592615.1 11993 13142 + 382PF01889DUF63Membrane protein of unknown function DUF635.10E-35
WP_004592619.1 14899 13189 - 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-49
WP_004592620.1 15749 14930 - 272PF19138DUF5821Family of unknown function (DUF5821)1.30E-98
WP_004592621.1 18206 16118 - 695NO PFAM MATCH---
WP_004592622.1 18360 19608 + 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
3.10E-149
4.60E-07
WP_049909393.1 19678 20263 + 194NO PFAM MATCH---
WP_004592624.1 20338 21232 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
9.30E-68
4.10E-35
WP_004592625.1 21232 21715 + 160PF00293NUDIXNUDIX domain1.50E-12
WP_004592626.1 22439 21719 - 239NO PFAM MATCH---
WP_004592627.1 22498 22645 + 48NO PFAM MATCH---

Results for WP_006674480.1 [Halobiforma nitratireducens JCM 10879] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006674473.1 11334 11130 - 67PF08281Sigma70_r4_2Sigma-70, region 45.10E-06
WP_006674474.1 11692 11323 - 122NO PFAM MATCH---
WP_006674475.1 11967 11688 - 92NO PFAM MATCH---
WP_083861166.1 12202 11959 - 80NO PFAM MATCH---
WP_006674476.1 13653 12486 - 388PF19107DUF5794Family of unknown function (DUF5794)3.00E-51
WP_006674477.1 14080 15583 + 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
7.80E-141
7.70E-22
2.90E-13
8.00E-10
8.80E-06
WP_006674478.1 16198 15712 - 161PF07883
PF02311
Cupin_2
AraC_binding
Cupin domain
AraC-like ligand binding domain
1.10E-09
5.40E-04
WP_083861167.1 16313 16838 + 174PF10518TAT_signalTAT (twin-arginine translocation) pathway signal sequence2.90E-04
WP_006674480.1 18745 16969 - 591PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-53
WP_006674481.1 19997 18851 - 381PF01145Band_7SPFH domain / Band 7 family2.80E-37
WP_006674482.1 20626 20122 - 167PF01877RNA_bindingRNA binding1.10E-31
WP_006674483.1 20992 20779 - 70NO PFAM MATCH---
WP_006674484.1 21347 21179 - 55NO PFAM MATCH---
WP_006674485.1 22114 21433 - 226PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
4.50E-14
4.90E-09
WP_006674486.1 22260 22797 + 178PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
7.90E-15
2.60E-05
WP_006674487.1 23834 22835 - 332PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
1.90E-09
2.80E-09
WP_006674488.1 24001 24535 + 177PF00583
PF13673
PF13508
PF13527
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_9
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
3.90E-16
9.10E-15
7.90E-11
2.30E-06
9.90E-05

Results for WP_007141787.1 [Halobiforma lacisalsi AJ5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007141779.1 64513 65527 + 337PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
9.20E-13
3.70E-10
WP_238593277.1 66032 65537 - 164PF00011
PF17886
HSP20
ArsA_HSP20
Hsp20/alpha crystallin family
HSP20-like domain found in ArsA
2.30E-15
1.70E-10
WP_007141781.1 66218 66899 + 226PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
7.40E-14
5.30E-09
WP_007141782.1 67014 67209 + 64NO PFAM MATCH---
WP_007141783.1 67312 67549 + 78NO PFAM MATCH---
WP_007141784.1 67657 68143 + 161PF01877RNA_bindingRNA binding4.50E-31
WP_007141785.1 68433 69678 + 414PF00999Na_H_ExchangerSodium/hydrogen exchanger family8.90E-60
WP_007141786.1 69772 70924 + 383PF01145Band_7SPFH domain / Band 7 family2.40E-38
WP_007141787.1 71026 72799 + 590PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-51
WP_007141788.1 73284 72822 - 153PF10518TAT_signalTAT (twin-arginine translocation) pathway signal sequence4.60E-04
WP_007141789.1 73390 73894 + 167PF07883
PF02311
Cupin_2
AraC_binding
Cupin domain
AraC-like ligand binding domain
4.30E-11
8.10E-04
WP_007141790.1 75561 74058 - 500PF00478
PF00571
PF03060
PF01070
PF05690
IMPDH
CBS
NMO
FMN_dh
ThiG
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Thiazole biosynthesis protein ThiG
5.90E-141
6.90E-21
1.80E-14
4.20E-09
9.80E-06
WP_007141791.1 76007 77084 + 358PF19107DUF5794Family of unknown function (DUF5794)1.10E-51
WP_007141792.1 77721 78006 + 94PF20068Amphi-TrpAmphi-Trp domain5.50E-34
WP_007141793.1 78548 78023 - 174NO PFAM MATCH---
WP_007141794.1 78752 79595 + 280PF04967HTH_10HTH DNA binding domain3.70E-18
WP_007141795.1 80779 80041 - 245PF01036Bac_rhodopsinBacteriorhodopsin-like protein1.10E-06
WP_156875543.1 80928 80775 - 50NO PFAM MATCH---

Results for WP_004056065.1 [Halococcus morrhuae DSM 1307] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004056050.1 15675 13599 - 691PF06798
PF08298
PrkA
AAA_PrkA
PrkA serine protein kinase C-terminal domain
PrkA AAA domain
7.70E-69
1.20E-63
WP_004056051.1 15940 16327 + 128PF19137DUF5820Family of unknown function (DUF5820)1.00E-51
WP_004056053.1 16375 16825 + 149PF03684
PF13751
UPF0179
DDE_Tnp_1_6
Uncharacterised protein family (UPF0179)
Transposase DDE domain
1.50E-47
7.50E-04
WP_004056060.1 17656 16825 - 276PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family5.80E-16
WP_004056061.1 18283 17710 - 190PF03745DUF309Domain of unknown function (DUF309)2.10E-13
WP_004056062.1 18632 18350 - 93NO PFAM MATCH---
WP_004056063.1 19230 18960 - 89NO PFAM MATCH---
WP_004056064.1 19328 20471 + 380PF01889DUF63Membrane protein of unknown function DUF634.40E-39
WP_004056065.1 22500 20793 - 568PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-52
WP_004056067.1 22610 23855 + 414PF00464
PF01212
PF00155
SHMT
Beta_elim_lyase
Aminotran_1_2
Serine hydroxymethyltransferase
Beta-eliminating lyase
Aminotransferase class I and II
1.70E-146
2.60E-08
5.20E-05
WP_004056069.1 24764 24008 - 251PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
7.80E-75
1.40E-58
2.00E-10
1.40E-04
WP_004056071.1 24908 25853 + 314PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
5.30E-66
6.20E-35
WP_004056073.1 26552 25865 - 228PF00932LTDLamin Tail Domain4.80E-15
WP_004056075.1 27424 26707 - 238NO PFAM MATCH---
WP_204365484.1 27535 28027 + 163NO PFAM MATCH---
WP_004056077.1 29403 28014 - 462PF13231PMT_2Dolichyl-phosphate-mannose-protein mannosyltransferase3.30E-04
WP_004056079.1 29775 30810 + 344PF01979
PF00962
PF07969
Amidohydro_1
A_deaminase
Amidohydro_3
Amidohydrolase family
Adenosine deaminase
Amidohydrolase family
1.10E-25
6.80E-09
3.90E-06

Results for WP_007693001.1 [Halococcus hamelinensis 100A6] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007692993.1 221 0 - 73PF04285DUF444Protein of unknown function (DUF444)1.70E-10
WP_007692994.1 2506 211 - 764PF06798
PF08298
PrkA
AAA_PrkA
PrkA serine protein kinase C-terminal domain
PrkA AAA domain
9.80E-37
1.80E-15
WP_007692995.1 4578 2505 - 690PF06798
PF08298
PrkA
AAA_PrkA
PrkA serine protein kinase C-terminal domain
PrkA AAA domain
6.00E-67
4.60E-66
WP_007692996.1 4907 5297 + 129PF19137DUF5820Family of unknown function (DUF5820)5.90E-52
WP_007692998.1 5346 5796 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)1.50E-47
WP_007692999.1 6639 5814 - 274PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.10E-15
WP_007693000.1 6991 8134 + 380PF01889DUF63Membrane protein of unknown function DUF631.70E-38
WP_007693001.1 10387 8674 - 570PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-53
WP_007693002.1 10948 10438 - 169PF01498HTH_Tnp_Tc3_2Transposase7.50E-04
WP_007693008.1 11797 10951 - 281PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.00E-21
7.70E-18
1.40E-10
WP_007693010.1 12930 11793 - 378PF00441
PF02771
PF08028
PF02770
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
8.90E-53
6.20E-31
7.70E-28
1.00E-26
WP_007693012.1 13063 14125 + 353PF08240
PF00107
PF01262
ADH_N
ADH_zinc_N
AlaDh_PNT_C
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Alanine dehydrogenase/PNT, C-terminal domain
6.90E-27
5.70E-23
6.90E-05
WP_007693014.1 14206 14824 + 205NO PFAM MATCH---
WP_007693017.1 15564 14826 - 245PF08704
PF01135
PF13649
PF06325
PF13847
GCD14
PCMT
Methyltransf_25
PrmA
Methyltransf_31
tRNA methyltransferase complex GCD14 subunit
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransferase domain
Ribosomal protein L11 methyltransferase (PrmA)
Methyltransferase domain
3.50E-10
2.80E-09
5.70E-06
2.10E-05
5.50E-05
WP_079254989.1 15968 15560 - 135PF01849
PF14555
PF19026
NAC
UBA_4
HYPK_UBA
NAC domain
UBA-like domain
HYPK UBA domain
7.10E-18
1.60E-04
5.00E-04
WP_007693021.1 16582 16294 - 95NO PFAM MATCH---

Results for WP_006077062.1 [Halococcus saccharolyticus DSM 5350] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049913937.1 38426 38084 - 113PF00111
PF13510
Fer2
Fer2_4
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-08
6.70E-06
WP_006077055.1 38554 39004 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)4.70E-48
WP_006077056.1 39202 40066 + 287PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
4.60E-26
3.40E-22
5.40E-16
WP_169316461.1 40243 40081 - 53NO PFAM MATCH---
WP_006077058.1 41219 40379 - 279PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-15
WP_006077059.1 41311 41758 + 148PF00293NUDIXNUDIX domain6.80E-14
WP_006077060.1 42239 41759 - 159PF03745DUF309Domain of unknown function (DUF309)2.70E-13
WP_006077061.1 42572 43715 + 380PF01889DUF63Membrane protein of unknown function DUF631.50E-37
WP_006077062.1 45689 43934 - 584PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-53
WP_006077063.1 46281 45723 - 185NO PFAM MATCH---
WP_006077064.1 46475 47723 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
3.10E-148
6.00E-08
1.50E-04
WP_080504903.1 47769 48276 + 168PF00293NUDIXNUDIX domain9.70E-13
WP_049913938.1 49291 48304 - 328PF00296Bac_luciferaseLuciferase-like monooxygenase2.70E-36
WP_006077067.1 50122 49387 - 244NO PFAM MATCH---
WP_152415671.1 50229 50748 + 172NO PFAM MATCH---
WP_006077069.1 52140 50739 - 466NO PFAM MATCH---
WP_006077070.1 52596 53526 + 309PF06267
PF08823
DUF1028
PG_binding_2
Family of unknown function (DUF1028)
Putative peptidoglycan binding domain
4.40E-75
1.20E-14

Results for WP_007741151.1 [Halococcus thailandensis JCM 13552] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007741137.1 12040 9751 - 762PF06798
PF08298
PrkA
AAA_PrkA
PrkA serine protein kinase C-terminal domain
PrkA AAA domain
3.80E-38
7.30E-15
WP_004056050.1 12039 14068 + 676INFERRED GENE---
WP_007741140.1 14333 14720 + 128PF19137DUF5820Family of unknown function (DUF5820)2.60E-51
WP_007741142.1 14768 15218 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)6.70E-48
WP_007741145.1 16049 15218 - 276PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family5.60E-15
WP_007741147.1 16625 16103 - 173PF03745DUF309Domain of unknown function (DUF309)2.10E-13
WP_007741148.1 17376 17106 - 89NO PFAM MATCH---
WP_049913106.1 17474 18617 + 380PF01889DUF63Membrane protein of unknown function DUF631.40E-38
WP_007741151.1 20712 18981 - 576PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.70E-53
WP_007741153.1 20839 22084 + 414PF00464
PF01212
SHMT
Beta_elim_lyase
Serine hydroxymethyltransferase
Beta-eliminating lyase
9.30E-146
1.30E-08
WP_007741156.1 23046 22290 - 251PF13561
PF00106
PF08659
PF01370
PF03435
adh_short_C2
adh_short
KR
Epimerase
Sacchrp_dh_NADP
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
Saccharopine dehydrogenase NADP binding domain
3.40E-74
1.80E-58
9.70E-11
1.30E-04
8.90E-04
WP_007741157.1 23188 24082 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
5.80E-67
3.50E-34
WP_049913107.1 24805 24094 - 236PF00932LTDLamin Tail Domain1.30E-15
WP_007741159.1 25846 24889 - 318PF00296Bac_luciferaseLuciferase-like monooxygenase4.30E-46
WP_007741160.1 26616 25899 - 238NO PFAM MATCH---
WP_241431235.1 26671 27220 + 182NO PFAM MATCH---
WP_049913108.1 28596 27207 - 462PF13231PMT_2Dolichyl-phosphate-mannose-protein mannosyltransferase8.20E-04

Results for WP_005044484.1 [Halococcus salifodinae DSM 8989] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005044478.1 242364 242814 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)6.50E-48
WP_241430406.1 243386 244169 + 260PF02275CBAHLinear amide C-N hydrolases, choloylglycine hydrolase family7.90E-34
WP_169317823.1 244403 244241 - 53NO PFAM MATCH---
WP_005044480.1 245371 244531 - 279PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-13
WP_005044481.1 245463 245910 + 148PF00293NUDIXNUDIX domain1.30E-13
WP_005044482.1 246391 245911 - 159PF03745DUF309Domain of unknown function (DUF309)7.30E-14
WP_005044483.1 246726 247869 + 380PF01889DUF63Membrane protein of unknown function DUF631.50E-39
WP_152424508.1 248223 248007 - 71NO PFAM MATCH---
WP_005044484.1 250021 248275 - 581PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-50
WP_005044486.1 250661 250055 - 201NO PFAM MATCH---
WP_005044487.1 250857 252105 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.00E-146
3.40E-09
6.80E-05
WP_005044488.1 252101 252644 + 180PF00293NUDIXNUDIX domain1.20E-14
WP_005044489.1 253424 252689 - 244NO PFAM MATCH---
WP_206536859.1 253532 254024 + 163NO PFAM MATCH---
WP_005044491.1 255440 254039 - 466NO PFAM MATCH---
WP_005044492.1 255792 256722 + 309PF06267
PF08823
DUF1028
PG_binding_2
Family of unknown function (DUF1028)
Putative peptidoglycan binding domain
2.10E-75
1.90E-12
WP_005044493.1 257087 257234 + 48NO PFAM MATCH---

Results for WP_011277428.1 back to top

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Couldn't process WP_011277428.1 Genbank filestream. May be corrupt.

Results for WP_008007472.1 [Halorubrum lipolyticum DSM 21995] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008007458.1 49634 50702 + 355PF03463
PF03465
PF03464
eRF1_1
eRF1_3
eRF1_2
eRF1 domain 1
eRF1 domain 3
eRF1 domain 2
4.90E-28
9.10E-25
3.00E-08
WP_008007460.1 54618 50718 - 1299PF07581
PF05342
PF02368
Glug
Peptidase_M26_N
Big_2
The GLUG motif
M26 IgA1-specific Metallo-endopeptidase N-terminal region
Bacterial Ig-like domain (group 2)
2.60E-21
1.40E-05
1.70E-05
WP_008007462.1 54967 55981 + 337PF00520
PF07885
Ion_trans
Ion_trans_2
Ion transport protein
Ion channel
1.60E-29
3.60E-14
WP_008007464.1 57050 56051 - 332PF02423
PF01488
PF03807
OCD_Mu_crystall
Shikimate_DH
F420_oxidored
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
7.30E-58
3.60E-07
2.60E-05
WP_008007465.1 57404 57131 - 90NO PFAM MATCH---
WP_008007467.1 58245 57834 - 136PF11255DUF3054Protein of unknown function (DUF3054)4.80E-24
WP_008007468.1 59597 58349 - 415PF00464
PF01212
SHMT
Beta_elim_lyase
Serine hydroxymethyltransferase
Beta-eliminating lyase
5.70E-149
2.50E-05
WP_008007470.1 59818 60634 + 271PF19138DUF5821Family of unknown function (DUF5821)4.30E-94
WP_008007472.1 60717 62409 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-52
WP_008007474.1 62468 62807 + 112PF07883
PF02311
PF00190
Cupin_2
AraC_binding
Cupin_1
Cupin domain
AraC-like ligand binding domain
Cupin
1.30E-18
1.10E-08
3.90E-05
WP_008007475.1 63766 63271 - 164PF00571CBSCBS domain2.80E-32
WP_008007478.1 64041 65280 + 412PF00067p450Cytochrome P4504.10E-25
WP_049911438.1 65710 67009 + 432NO PFAM MATCH---
WP_049911439.1 67091 68360 + 422PF00924MS_channelMechanosensitive ion channel2.80E-47
C469_RS17550 69598 70057 + 153INFERRED GENE---
WP_008007486.1 72097 70354 - 580PF08676
PF01119
PF13589
PF02518
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL C terminal dimerisation domain
DNA mismatch repair protein, C-terminal domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
2.30E-31
3.70E-26
5.10E-09
1.80E-05
WP_049911440.1 74939 72086 - 950PF00488
PF05192
PF01624
PF05190
PF05188
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS domain V
MutS domain III
MutS domain I
MutS family domain IV
MutS domain II
4.50E-75
1.80E-34
8.50E-33
2.10E-29
2.90E-12

Results for WP_008000982.1 [Halorubrum aidingense JCM 13560] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008000973.1 1124 125 - 332PF02423
PF01488
PF03807
OCD_Mu_crystall
Shikimate_DH
F420_oxidored
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
5.10E-60
1.50E-07
3.40E-04
WP_008000975.1 1552 1198 - 117NO PFAM MATCH---
WP_008000977.1 2144 1733 - 136PF11255DUF3054Protein of unknown function (DUF3054)1.30E-24
WP_008000979.1 3528 2280 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.10E-149
2.50E-08
1.30E-04
WP_049906537.1 3753 4569 + 271PF19138DUF5821Family of unknown function (DUF5821)6.10E-96
WP_008000982.1 4676 6368 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-54
WP_008000983.1 6426 6765 + 112PF07883
PF02311
PF00190
PF01050
PF12852
Cupin_2
AraC_binding
Cupin_1
MannoseP_isomer
Cupin_6
Cupin domain
AraC-like ligand binding domain
Cupin
Mannose-6-phosphate isomerase
Cupin
5.50E-20
2.20E-11
3.70E-08
1.80E-04
5.50E-04
WP_008000984.1 6933 8013 + 359PF00288
PF08544
GHMP_kinases_N
GHMP_kinases_C
GHMP kinases N terminal domain
GHMP kinases C terminal
1.10E-07
1.50E-04
WP_008000985.1 8038 8875 + 278PF06745ATPaseKaiC1.50E-05
WP_008000986.1 8971 9886 + 304NO PFAM MATCH---
WP_008000987.1 9882 10584 + 233NO PFAM MATCH---
WP_008000989.1 10678 11800 + 373PF16983MFS_MOT1Molybdate transporter of MFS superfamily6.10E-39
WP_008000992.1 12129 12459 + 109PF01096
PF02150
TFIIS_C
RNA_POL_M_15KD
Transcription factor S-II (TFIIS)
RNA polymerases M/15 Kd subunit
2.80E-16
1.10E-04
WP_008000994.1 12544 13063 + 172NO PFAM MATCH---

Results for WP_008367323.1 [Halorubrum litoreum JCM 13561] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008367311.1 4356 5106 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.30E-23
WP_008367312.1 5964 5115 - 282NO PFAM MATCH---
WP_008367313.1 7258 6013 - 414PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
1.00E-30
9.00E-16
8.40E-15
WP_008367315.1 8452 7351 - 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family7.20E-72
WP_004597126.1 8565 8733 + 55NO PFAM MATCH---
WP_049908706.1 9395 8801 - 197PF00072Response_regResponse regulator receiver domain5.90E-10
WP_004597124.1 10908 9630 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
6.70E-148
6.30E-14
1.10E-07
1.20E-05
1.50E-04
WP_008367321.1 11422 11083 - 112PF07883
PF02311
PF00190
PF07847
Cupin_2
AraC_binding
Cupin_1
PCO_ADO
Cupin domain
AraC-like ligand binding domain
Cupin
PCO_ADO
5.60E-18
3.60E-08
1.50E-05
6.90E-04
WP_008367323.1 13213 11521 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-51
WP_004597121.1 14141 13319 - 273PF19138DUF5821Family of unknown function (DUF5821)6.60E-94
WP_008367324.1 14473 15721 + 415PF00464
PF01212
PF00155
SHMT
Beta_elim_lyase
Aminotran_1_2
Serine hydroxymethyltransferase
Beta-eliminating lyase
Aminotransferase class I and II
8.30E-148
9.10E-05
9.80E-05
WP_004597119.1 15795 16206 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.10E-22
WP_004597118.1 16390 16660 + 89NO PFAM MATCH---
WP_008367326.1 16760 17762 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
2.30E-56
2.60E-06
WP_008367328.1 17819 18329 + 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
1.20E-34
1.90E-05
WP_160162944.1 18614 18788 + 57PF05207zf-CSLCSL zinc finger2.70E-04

Results for WP_008847874.1 [Halorubrum kocurii JCM 14978] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008847867.1 0 550 + 182NO PFAM MATCH---
WP_008847868.1 681 1200 + 172NO PFAM MATCH---
WP_008847869.1 2479 1234 - 414PF00924MS_channelMechanosensitive ion channel1.50E-46
WP_049912082.1 3859 2569 - 429NO PFAM MATCH---
WP_008847871.1 5448 4209 - 412PF00067p450Cytochrome P4503.10E-26
WP_008847872.1 5654 6149 + 164PF00571CBSCBS domain2.00E-31
WP_008847873.1 7009 6670 - 112PF07883
PF02311
PF00190
PF12852
Cupin_2
AraC_binding
Cupin_1
Cupin_6
Cupin domain
AraC-like ligand binding domain
Cupin
Cupin
5.50E-19
1.90E-09
8.40E-07
2.30E-04
WP_008847874.1 8761 7069 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-51
WP_008847875.1 9661 8845 - 271PF19138DUF5821Family of unknown function (DUF5821)1.10E-94
WP_008847876.1 9850 11098 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
6.50E-148
2.00E-06
6.30E-05
WP_008847877.1 11170 11581 + 136PF11255DUF3054Protein of unknown function (DUF3054)3.30E-25
WP_008847878.1 11885 12164 + 92NO PFAM MATCH---
WP_008847879.1 12292 13291 + 332PF02423
PF01488
PF03807
OCD_Mu_crystall
Shikimate_DH
F420_oxidored
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
1.40E-55
2.50E-06
1.30E-04
WP_049912086.1 13763 13364 - 132NO PFAM MATCH---
WP_008847881.1 14924 13856 - 355PF03463
PF03465
PF03464
eRF1_1
eRF1_3
eRF1_2
eRF1 domain 1
eRF1 domain 3
eRF1 domain 2
3.60E-28
5.90E-25
4.50E-08
WP_008847882.1 16065 14949 - 371PF13197DUF4013Protein of unknown function (DUF4013)8.10E-16

Results for WP_007996422.1 [Halorubrum arcis JCM 13916] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007996410.1 49467 50217 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.90E-23
WP_004597129.1 51075 50226 - 282NO PFAM MATCH---
WP_007996414.1 52393 51148 - 414PF13527
PF17668
PF13530
Acetyltransf_9
Acetyltransf_17
SCP2_2
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Sterol carrier protein domain
2.60E-30
8.00E-16
3.00E-14
WP_004597127.1 53587 52486 - 366PF00724
PF01207
Oxidored_FMN
Dus
NADH:flavin oxidoreductase / NADH oxidase family
Dihydrouridine synthase (Dus)
2.50E-72
6.40E-04
WP_004597126.1 53700 53868 + 55NO PFAM MATCH---
WP_049897941.1 54530 53936 - 197PF00072Response_regResponse regulator receiver domain1.10E-09
WP_007996420.1 56043 54765 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
1.10E-147
8.80E-14
1.80E-07
1.00E-05
1.50E-04
WP_004597123.1 56568 56229 - 112PF07883
PF02311
PF00190
PF07847
Cupin_2
AraC_binding
Cupin_1
PCO_ADO
Cupin domain
AraC-like ligand binding domain
Cupin
PCO_ADO
2.40E-18
2.30E-08
9.40E-06
4.60E-04
WP_007996422.1 58359 56667 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-52
WP_004597121.1 59289 58467 - 273PF19138DUF5821Family of unknown function (DUF5821)6.60E-94
WP_007996423.1 59566 60814 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.20E-148
3.70E-07
1.30E-05
WP_004597119.1 60888 61299 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.10E-22
WP_004597118.1 61483 61753 + 89NO PFAM MATCH---
WP_007345316.1 62000 63002 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
7.20E-57
4.00E-06
WP_007996426.1 63059 63569 + 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
6.90E-35
1.90E-05
WP_007996428.1 64014 65736 + 573PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
2.90E-80
1.50E-56
WP_007996430.1 67402 65743 - 552PF13185
PF02518
PF00512
PF01590
PF13492
GAF_2
HATPase_c
HisKA
GAF
GAF_3
GAF domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
GAF domain
8.50E-17
7.30E-16
9.10E-12
1.10E-06
1.10E-06

Results for WP_014870857.1 [Marinobacter sp. BSs20148] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014870847.1 1664207 1665275 + 355PF03060
PF00478
NMO
IMPDH
Nitronate monooxygenase
IMP dehydrogenase / GMP reductase domain
6.60E-76
2.20E-10
WP_041635521.1 1665415 1666003 + 195PF01810LysELysE type translocator7.50E-19
WP_014870849.1 1666825 1665964 - 286PF12833
PF00165
PF02311
HTH_18
HTH_AraC
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-like ligand binding domain
5.30E-19
8.90E-19
2.80E-14
WP_014870850.1 1667273 1666958 - 104PF01355HIPIPHigh potential iron-sulfur protein2.30E-19
WP_014870852.1 1668358 1668814 + 151PF05425CopDCopper resistance protein D3.70E-16
WP_014870853.1 1668850 1669054 + 67NO PFAM MATCH---
WP_014870854.1 1669411 1669078 - 110PF00893
PF00892
Multi_Drug_Res
EamA
Small Multidrug Resistance protein
EamA-like transporter family
1.20E-31
5.90E-05
WP_014870856.1 1670193 1669821 - 123PF01844HNHHNH endonuclease1.60E-10
WP_014870857.1 1672433 1670252 - 726PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.90E-76
2.10E-73
3.70E-08
WP_014870858.1 1672600 1673215 + 204PF03352Adenine_glycoMethyladenine glycosylase1.10E-66
WP_014870859.1 1673954 1673192 - 253PF00455
PF08220
PF08279
PF12802
PF19187
DeoRC
HTH_DeoR
HTH_11
MarR_2
HTH_PafC
DeoR C terminal sensor domain
DeoR-like helix-turn-helix domain
HTH domain
MarR family
PafC helix-turn-helix domain
6.20E-41
9.50E-19
1.00E-08
1.70E-06
2.60E-06
WP_014870860.1 1674800 1673990 - 269PF08282Hydrolase_3haloacid dehalogenase-like hydrolase4.70E-06
WP_014870861.1 1675627 1674817 - 269PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-16
WP_014870862.1 1676439 1675620 - 272PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.40E-15
WP_014870863.1 1677239 1676435 - 267PF00005
PF13304
PF13555
PF13191
PF02463
ABC_tran
AAA_21
AAA_29
AAA_16
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
AAA ATPase domain
RecF/RecN/SMC N terminal domain
5.40E-35
4.60E-07
7.90E-05
1.20E-04
4.60E-04
WP_014870864.1 1678285 1677292 - 330PF12974
PF00497
Phosphonate-bd
SBP_bac_3
ABC transporter, phosphonate, periplasmic substrate-binding protein
Bacterial extracellular solute-binding proteins, family 3
1.20E-52
7.80E-04
WP_041635152.1 1678614 1679322 + 235NO PFAM MATCH---

Results for WP_011277428.1 back to top

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Couldn't process WP_011277428.1 Genbank filestream. May be corrupt.

Results for WP_015405050.1 [Desulfocapsa sulfexigens DSM 10523] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015405042.1 3143649 3144081 + 143PF00436SSBSingle-strand binding protein family1.80E-43
WP_015405043.1 3144569 3145493 + 307PF01556
PF00226
DnaJ_C
DnaJ
DnaJ C terminal domain
DnaJ domain
1.70E-39
1.00E-29
WP_015405044.1 3146107 3145570 - 178PF00694Aconitase_CAconitase C-terminal domain2.20E-20
WP_015405045.1 3147407 3146117 - 429PF00330
PF04412
Aconitase
AcnX
Aconitase family (aconitate hydratase)
Aconitase X
1.70E-107
6.60E-04
WP_015405046.1 3147593 3149420 + 608PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle6.80E-78
WP_015405047.1 3149429 3151013 + 527PF00072
PF07730
PF02518
PF00989
PF13426
Response_reg
HisKA_3
HATPase_c
PAS
PAS_9
Response regulator receiver domain
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
PAS domain
5.00E-18
3.20E-14
1.60E-11
6.20E-11
4.90E-08
WP_015405048.1 3151012 3151489 + 158PF02367
PF13238
PF00910
TsaE
AAA_18
RNA_helicase
Threonylcarbamoyl adenosine biosynthesis protein TsaE
AAA domain
RNA helicase
1.50E-37
2.50E-04
3.50E-04
WP_015405049.1 3151549 3152752 + 400PF08668
PF00563
HDOD
EAL
HDOD domain
EAL domain
1.20E-17
7.20E-16
WP_015405050.1 3152917 3154663 + 581PF02624
PF07719
PF00515
PF13181
PF13414
YcaO
TPR_2
TPR_1
TPR_8
TPR_11
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
4.20E-70
8.10E-28
9.00E-27
4.60E-18
2.60E-17
WP_015405051.1 3154703 3155879 + 391PF01075Glyco_transf_9Glycosyltransferase family 9 (heptosyltransferase)2.50E-50
WP_015405052.1 3155893 3156520 + 208PF13242
PF13419
PF12710
PF13344
PF08645
Hydrolase_like
HAD_2
HAD
Hydrolase_6
PNK3P
HAD-hyrolase-like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
Haloacid dehalogenase-like hydrolase
Polynucleotide kinase 3 phosphatase
2.10E-15
2.80E-07
3.50E-05
1.20E-04
1.50E-04
WP_015405053.1 3157427 3156491 - 311PF02016
PF17676
Peptidase_S66
Peptidase_S66C
LD-carboxypeptidase N-terminal domain
LD-carboxypeptidase C-terminal domain
6.90E-33
2.60E-30
WP_015405054.1 3158214 3157416 - 265PF03309Pan_kinaseType III pantothenate kinase1.60E-64
WP_015405055.1 3158322 3158643 + 106PF03091CutA1CutA1 divalent ion tolerance protein2.30E-33
WP_015405057.1 3158885 3159854 + 322PF04392ABC_sub_bindABC transporter substrate binding protein1.50E-105
WP_015405058.1 3159874 3160780 + 301PF02653BPD_transp_2Branched-chain amino acid transport system / permease component9.90E-22
WP_015405059.1 3160776 3161571 + 264PF00005
PF13304
PF02463
PF09818
PF13555
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
1.60E-23
1.50E-09
7.70E-08
1.40E-05
4.90E-04

Results for WP_000197742.1 back to top

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Couldn't process WP_000197742.1 Genbank filestream. May be corrupt.

Results for WP_015413464.1 [Pseudodesulfovibrio piezophilus C1TLV30] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015413455.1 164749 165385 + 211PF12945PilZNRFlagellar protein YcgR6.60E-13
WP_015413456.1 166290 165381 - 302PF07992
PF13738
PF01134
PF00890
PF03486
Pyr_redox_2
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Glucose inhibited division protein A
FAD binding domain
HI0933-like protein
3.20E-35
5.20E-15
1.80E-10
2.00E-09
1.10E-08
WP_231856627.1 166864 166366 - 165PF04116FA_hydroxylaseFatty acid hydroxylase8.80E-25
WP_015413458.1 167973 167196 - 258PF01966HDHD domain1.90E-10
WP_015413460.1 168299 167969 - 109NO PFAM MATCH---
WP_015413461.1 168485 168884 + 132PF00072Response_regResponse regulator receiver domain9.80E-20
WP_157871232.1 168933 169665 + 243PF04280Tim44Tim44-like domain7.60E-08
WP_015413463.1 169690 170413 + 240PF10294
PF05175
Methyltransf_16
MTS
Lysine methyltransferase
Methyltransferase small domain
5.70E-09
1.40E-06
WP_015413464.1 170409 172137 + 575PF02624
PF00515
PF07719
PF13181
PF13424
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.90E-53
9.50E-15
1.00E-14
1.30E-08
8.80E-08
WP_015413465.1 172350 172668 + 105PF04358DsrCDsrC like protein2.50E-34
WP_015413466.1 172846 173068 + 73PF01197Ribosomal_L31Ribosomal protein L311.50E-28
WP_015413467.1 173267 174215 + 315PF07136DUF1385Protein of unknown function (DUF1385)3.80E-78
WP_015413468.1 174218 175286 + 355PF03462
PF00472
PCRF
RF-1
PCRF domain
RF-1 domain
9.90E-73
7.10E-41
WP_015413469.1 175306 176161 + 284PF17827
PF05175
PF13847
PF13649
PF06325
PrmC_N
MTS
Methyltransf_31
Methyltransf_25
PrmA
PrmC N-terminal domain
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
Ribosomal protein L11 methyltransferase (PrmA)
1.30E-15
6.20E-13
7.70E-11
8.00E-10
2.00E-07
WP_015413470.1 176340 177261 + 306PF03331LpxCUDP-3-O-acyl N-acetylglycosamine deacetylase4.60E-101
WP_015413471.1 178369 177541 - 275NO PFAM MATCH---
WP_015413472.1 178780 178372 - 135PF13870DUF4201Domain of unknown function (DUF4201)8.10E-04

Results for WP_015413383.1 [Pseudodesulfovibrio piezophilus C1TLV30] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015413374.1 81700 80272 - 475PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family3.10E-31
WP_015413375.1 82452 81696 - 251PF11932DUF3450Protein of unknown function (DUF3450)2.80E-85
WP_015413376.1 84181 82879 - 433NO PFAM MATCH---
WP_015413377.1 85305 84177 - 375PF00534
PF13692
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferases group 1
1.10E-21
5.00E-17
1.20E-05
WP_015413378.1 86387 85322 - 354PF13692
PF00534
PF13439
PF09314
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
DUF1972
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Domain of unknown function (DUF1972)
2.10E-16
3.90E-16
4.50E-06
7.90E-05
WP_015413379.1 87180 86376 - 267PF00535
PF10111
PF13641
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
1.90E-10
5.00E-06
3.90E-04
WP_157871222.1 88191 87192 - 332PF04932Wzy_CO-Antigen ligase6.20E-13
WP_015413382.1 89744 88469 - 424NO PFAM MATCH---
WP_015413383.1 92448 90732 - 571PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-43
WP_015413384.1 93194 92624 - 189PF13472
PF00657
PF17182
Lipase_GDSL_2
Lipase_GDSL
OSK
GDSL-like Lipase/Acylhydrolase family
GDSL-like Lipase/Acylhydrolase
OSK domain
7.80E-22
2.80E-08
9.10E-05
WP_015413385.1 93716 93194 - 173NO PFAM MATCH---
WP_041720514.1 94339 93724 - 204PF04381RdgCPutative exonuclease, RdgC3.70E-08
WP_015413387.1 94564 94933 + 122NO PFAM MATCH---
WP_015413388.1 95573 94934 - 212PF07238PilZPilZ domain3.50E-05
WP_015413389.1 95772 95916 + 47NO PFAM MATCH---
WP_015413390.1 96876 95985 - 296PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
8.90E-66
6.30E-09
WP_015413391.1 97004 97739 + 244PF07758DUF1614Protein of unknown function (DUF1614)1.00E-43

Results for WP_005006344.1 [Nitrospina gracilis 3/211] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005006326.1 455750 454631 - 372PF00072
PF13487
PF01966
Response_reg
HD_5
HD
Response regulator receiver domain
HD domain
HD domain
1.30E-25
1.80E-19
3.30E-17
WP_084603918.1 456733 456253 - 159PF00072Response_regResponse regulator receiver domain5.60E-27
WP_005006327.1 457835 457184 - 216PF00072
PF00196
Response_reg
GerE
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
5.20E-28
1.60E-16
WP_005006330.1 459663 457827 - 611PF17152
PF08447
PF07730
PF02518
PF00672
CHASE8
PAS_3
HisKA_3
HATPase_c
HAMP
Periplasmic sensor domain
PAS fold
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
4.40E-19
4.90E-18
1.60E-14
9.10E-08
1.10E-07
WP_187291892.1 460176 459669 - 168PF13689DUF4154YfiR/HmsC-like2.70E-35
WP_187291893.1 462198 460257 - 646PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
1.80E-31
4.40E-23
4.60E-08
WP_005006339.1 462711 462942 + 76NO PFAM MATCH---
WP_042250342.1 463150 464149 + 332PF00899ThiFThiF family1.60E-05
WP_005006344.1 464135 465320 + 394PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-55
WP_052338167.1 465535 466354 + 272PF00881NitroreductaseNitroreductase family6.00E-24
WP_005006348.1 467711 466580 - 376PF00072
PF13487
PF01966
Response_reg
HD_5
HD
Response regulator receiver domain
HD domain
HD domain
5.50E-27
1.40E-15
1.30E-14
WP_005006351.1 468997 467995 - 333NO PFAM MATCH---
WP_005006353.1 469767 469008 - 252PF13582
PF13688
Reprolysin_3
Reprolysin_5
Metallo-peptidase family M12B Reprolysin-like
Metallo-peptidase family M12
2.30E-05
3.70E-04
WP_144079056.1 471259 470257 - 333PF02518
PF00512
PF13185
HATPase_c
HisKA
GAF_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
1.30E-21
2.90E-14
1.40E-04
WP_084603925.1 471927 471294 - 210PF13426
PF00989
PF08448
PF08447
PF13188
PAS_9
PAS
PAS_4
PAS_3
PAS_8
PAS domain
PAS fold
PAS fold
PAS fold
PAS domain
2.60E-15
1.00E-14
4.40E-13
3.50E-06
2.40E-05
WP_052338169.1 473178 472068 - 369NO PFAM MATCH---
WP_005006359.1 474120 473334 - 261PF17131
PF07044
LolA_like
DUF1329
Outer membrane lipoprotein-sorting protein
Protein of unknown function (DUF1329)
1.10E-51
1.40E-13

Results for WP_005154196.1 [Amycolatopsis azurea DSM 43854] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005154208.1 3872 3590 - 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor1.20E-30
WP_005154207.1 4038 4401 + 120PF03795
PF20321
YCII
DUF6616
YCII-related domain
Family of unknown function (DUF6616)
1.10E-18
2.50E-04
WP_245191899.1 5054 4397 - 218PF05103DivIVADivIVA protein1.60E-05
WP_005154203.1 5355 5970 + 204PF07398
PF11716
PF12867
MDMPI_C
MDMPI_N
DinB_2
MDMPI C-terminal domain
Mycothiol maleylpyruvate isomerase N-terminal domain
DinB superfamily
3.20E-05
1.20E-04
8.90E-04
WP_005154202.1 7305 5970 - 444PF04234
PF05425
CopC
CopD
CopC domain
Copper resistance protein D
9.80E-17
2.50E-14
WP_005154201.1 7880 7301 - 192NO PFAM MATCH---
WP_005154200.1 8680 7996 - 227PF01638
PF02036
HxlR
SCP2
HxlR-like helix-turn-helix
SCP-2 sterol transfer family
1.30E-23
7.50E-04
WP_143254740.1 9561 8721 - 279PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
2.90E-41
1.80E-09
5.50E-04
WP_005154196.1 9784 12061 + 758PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-101
WP_005154194.1 12103 13549 + 481PF12802
PF00881
MarR_2
Nitroreductase
MarR family
Nitroreductase family
2.70E-04
8.70E-04
WP_005154193.1 14108 15011 + 300PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
7.80E-22
1.60E-21
WP_005154191.1 15187 16129 + 313PF08012DUF1702Protein of unknown function (DUF1702)2.50E-127
WP_005154190.1 16125 18090 + 654PF13517
PF01839
PF07593
FG-GAP_3
FG-GAP
UnbV_ASPIC
FG-GAP-like repeat
FG-GAP repeat
ASPIC and UnbV
1.40E-22
3.70E-16
3.30E-11
WP_005154188.1 18095 19082 + 328PF03116NQR2_RnfD_RnfENQR2, RnfD, RnfE family4.80E-04
WP_005154187.1 19078 20431 + 450PF00067p450Cytochrome P4506.00E-87
WP_005154186.1 20436 20994 + 185PF19449DUF5987Family of unknown function (DUF5987)8.30E-91
WP_005154185.1 20990 22643 + 550PF00732
PF05199
PF01266
PF07992
PF00890
GMC_oxred_N
GMC_oxred_C
DAO
Pyr_redox_2
FAD_binding_2
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
3.40E-14
1.10E-11
2.60E-11
2.20E-06
1.50E-05

Results for WP_002675243.1 [Treponema sp. B152] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_253719643.1 928719 929586 + 288PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.30E-20
WP_002669654.1 929741 929999 + 85NO PFAM MATCH---
WP_253719644.1 930043 930910 + 288PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.00E-20
WP_002669651.1 931065 931308 + 80NO PFAM MATCH---
WP_253716103.1 931352 932189 + 278PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.30E-22
WP_002675246.1 932178 933024 + 281NO PFAM MATCH---
WP_002675245.1 933016 933607 + 196NO PFAM MATCH---
WP_002675244.1 933599 934586 + 328PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.20E-06
WP_002675243.1 934596 935589 + 330PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-10
WP_002675242.1 935608 937246 + 545PF00664
PF00005
PF02463
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.70E-21
6.80E-16
1.00E-05
4.70E-04
WP_002675240.1 937402 940456 + 1017PF08367
PF05193
PF00675
M16C_assoc
Peptidase_M16_C
Peptidase_M16
Peptidase M16C associated
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
5.90E-50
1.20E-25
8.20E-08
WP_002675238.1 940488 941025 + 178PF02075RuvCCrossover junction endodeoxyribonuclease RuvC3.90E-49
WP_002675237.1 941017 941623 + 201PF14520
PF01330
PF00633
PF14716
HHH_5
RuvA_N
HHH
HHH_8
Helix-hairpin-helix domain
RuvA N terminal domain
Helix-hairpin-helix motif
Helix-hairpin-helix domain
7.20E-17
2.20E-16
6.70E-07
1.10E-04
WP_002675235.1 942617 941645 - 323PF13349DUF4097Putative adhesin9.70E-16
WP_002675061.1 942847 942658 - 62NO PFAM MATCH---
WP_002675232.1 943476 942945 - 176PF08006DUF1700Protein of unknown function (DUF1700)9.90E-20
WP_002675230.1 944671 943477 - 397PF13349
PF08006
DUF4097
DUF1700
Putative adhesin
Protein of unknown function (DUF1700)
1.50E-27
1.00E-09

Results for WP_007034522.1 [Amycolatopsis decaplanina DSM 44594] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063705478.1 199684 201055 + 456PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-65
WP_007034517.1 201087 201768 + 226NO PFAM MATCH---
WP_007034518.1 201764 204203 + 812PF00881NitroreductaseNitroreductase family5.70E-08
WP_039923942.1 204798 204978 + 59NO PFAM MATCH---
WP_161630717.1 205036 205210 + 57NO PFAM MATCH---
WP_007034519.1 205338 205509 + 56NO PFAM MATCH---
WP_007034520.1 205597 206761 + 387PF02163Peptidase_M50Peptidase family M502.00E-06
WP_007034521.1 206836 207538 + 233PF13462
PF01323
Thioredoxin_4
DSBA
Thioredoxin
DSBA-like thioredoxin domain
4.30E-24
1.70E-08
WP_007034522.1 207572 208901 + 442PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-63
WP_007034523.1 208926 209559 + 210NO PFAM MATCH---
WP_007034524.1 209555 210986 + 476NO PFAM MATCH---
WP_007034525.1 210982 211534 + 183NO PFAM MATCH---
WP_007034526.1 211530 212121 + 196NO PFAM MATCH---
WP_007034527.1 212117 214532 + 804PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-09
WP_039923945.1 214678 216073 + 464PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
4.80E-116
1.90E-42
WP_007034529.1 216373 218467 + 697PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
4.90E-35
6.90E-09
1.70E-06
4.60E-06
WP_007034530.1 220053 218463 - 529PF13556
PF17853
HTH_30
GGDEF_2
PucR C-terminal helix-turn-helix domain
GGDEF-like domain
3.20E-21
1.40E-08

Results for WP_007034639.1 [Amycolatopsis decaplanina DSM 44594] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007034631.1 3962 3680 - 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor1.40E-30
WP_007034632.1 4128 4485 + 118PF03795
PF20321
YCII
DUF6616
YCII-related domain
Family of unknown function (DUF6616)
1.20E-18
2.30E-04
WP_007034633.1 5210 4541 - 222PF05103DivIVADivIVA protein1.90E-06
WP_007034634.1 5437 6133 + 231PF12867DinB_2DinB superfamily8.10E-06
WP_007034635.1 7468 6133 - 444PF04234
PF05425
CopC
CopD
CopC domain
Copper resistance protein D
9.00E-19
4.00E-14
WP_007034636.1 8043 7464 - 192NO PFAM MATCH---
WP_007034637.1 8844 8157 - 228PF01638HxlRHxlR-like helix-turn-helix2.60E-23
WP_152521550.1 9724 8884 - 279PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
7.40E-41
4.70E-10
6.90E-04
WP_007034639.1 9946 12220 + 757PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-100
WP_007034640.1 12262 13708 + 481PF00881NitroreductaseNitroreductase family4.50E-05
WP_007034641.1 14008 14890 + 293PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
7.70E-22
6.30E-21
WP_020645503.1 15049 15985 + 312INFERRED GENE---
WP_007034643.1 16158 18123 + 654PF13517
PF01839
PF07593
FG-GAP_3
FG-GAP
UnbV_ASPIC
FG-GAP-like repeat
FG-GAP repeat
ASPIC and UnbV
3.70E-22
1.10E-15
4.30E-12
WP_039924155.1 18128 19115 + 328PF03116NQR2_RnfD_RnfENQR2, RnfD, RnfE family3.70E-04
WP_007034645.1 19111 20464 + 450PF00067p450Cytochrome P4505.70E-88
WP_007034646.1 20469 21027 + 185PF19449DUF5987Family of unknown function (DUF5987)1.30E-90
WP_007034647.1 21023 22676 + 550PF00732
PF05199
PF01266
PF07992
PF00890
GMC_oxred_N
GMC_oxred_C
DAO
Pyr_redox_2
FAD_binding_2
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
1.20E-14
4.10E-12
2.90E-11
6.30E-06
6.30E-05

Results for WP_004939295.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_004943462.1 [Streptomyces mobaraensis NBRC 13819 = DSM 40847] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004943486.1 7347293 7347839 + 181NO PFAM MATCH---
WP_004943483.1 7348669 7347859 - 269NO PFAM MATCH---
WP_004943480.1 7350037 7348843 - 397PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.40E-44
WP_004943476.1 7351053 7350033 - 339PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term4.50E-51
WP_004943473.1 7353637 7351039 - 865PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-40
WP_004943471.1 7355596 7353652 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-78
WP_004943468.1 7355906 7355723 - 60NO PFAM MATCH---
WP_004943465.1 7357997 7356065 - 643PF00881NitroreductaseNitroreductase family1.50E-14
WP_004943462.1 7359900 7357989 - 636NO PFAM MATCH---
WP_040889396.1 7362502 7360132 - 789PF00704
PF06483
Glyco_hydro_18
ChiC
Glycosyl hydrolases family 18
Chitinase C
2.30E-85
4.20E-73
WP_004943457.1 7362891 7363182 + 96PF04226Transgly_assocTransglycosylase associated protein3.10E-10
WP_004943454.1 7364789 7363547 - 413PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
2.90E-33
4.10E-11
WP_004943451.1 7365098 7364876 - 73PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase9.10E-05
J7W19_RS33310 7365190 7365679 + 163INFERRED GENE---
WP_051072567.1 7365875 7369184 + 1102PF03704
PF00486
PF13401
PF00931
PF13424
BTAD
Trans_reg_C
AAA_22
NB-ARC
TPR_12
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
AAA domain
NB-ARC domain
Tetratricopeptide repeat
2.20E-38
6.90E-08
1.20E-07
6.40E-07
1.40E-06
WP_004943445.1 7369770 7370946 + 391PF07228SpoIIEStage II sporulation protein E (SpoIIE)3.70E-39
WP_040889394.1 7372998 7370970 - 675PF06241Castor_Poll_midCastor and Pollux, part of voltage-gated ion channel2.30E-26

Results for WP_004943471.1 [Streptomyces mobaraensis NBRC 13819 = DSM 40847] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004943495.1 7342110 7342512 + 133PF19460DUF5997Family of unknown function (DUF5997)5.70E-53
WP_004943491.1 7342851 7343952 + 366PF00924MS_channelMechanosensitive ion channel3.30E-46
WP_004943488.1 7344174 7346982 + 935PF13191
PF00196
PF08281
AAA_16
GerE
Sigma70_r4_2
AAA ATPase domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
1.10E-13
6.00E-13
1.90E-04
WP_004943486.1 7347293 7347839 + 181NO PFAM MATCH---
WP_004943483.1 7348669 7347859 - 269NO PFAM MATCH---
WP_004943480.1 7350037 7348843 - 397PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.40E-44
WP_004943476.1 7351053 7350033 - 339PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term4.50E-51
WP_004943473.1 7353637 7351039 - 865PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-40
WP_004943471.1 7355596 7353652 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-78
WP_004943468.1 7355906 7355723 - 60NO PFAM MATCH---
WP_004943465.1 7357997 7356065 - 643PF00881NitroreductaseNitroreductase family1.50E-14
WP_004943462.1 7359900 7357989 - 636NO PFAM MATCH---
WP_040889396.1 7362502 7360132 - 789PF00704
PF06483
Glyco_hydro_18
ChiC
Glycosyl hydrolases family 18
Chitinase C
2.30E-85
4.20E-73
WP_004943457.1 7362891 7363182 + 96PF04226Transgly_assocTransglycosylase associated protein3.10E-10
WP_004943454.1 7364789 7363547 - 413PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
2.90E-33
4.10E-11
WP_004943451.1 7365098 7364876 - 73PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase9.10E-05
J7W19_RS33310 7365190 7365679 + 163INFERRED GENE---

Results for WP_006130566.1 [Streptomyces gancidicus BKS 13-15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_267283564.1 19507 19372 - 44NO PFAM MATCH---
WP_006130559.1 21265 19516 - 582PF02770
PF00441
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
2.50E-07
1.00E-06
WP_006130560.1 21545 21320 - 74NO PFAM MATCH---
WP_006130561.1 21740 22361 + 206PF03992ABMAntibiotic biosynthesis monooxygenase7.30E-08
WP_078592207.1 22451 22649 + 65PF13822ACC_epsilonAcyl-CoA carboxylase epsilon subunit3.80E-14
WP_006130562.1 22794 24558 + 587PF00501AMP-bindingAMP-binding enzyme1.90E-85
WP_006130563.1 24580 25831 + 416PF00698Acyl_transf_1Acyl transferase domain3.90E-49
WP_006130564.1 26478 25863 - 204PF00072
PF00196
Response_reg
GerE
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
4.20E-19
4.00E-17
WP_006130565.1 27711 26520 - 396PF07730HisKA_3Histidine kinase5.60E-15
WP_006130566.1 30137 27890 - 748PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-91
WP_006130567.1 30389 30137 - 83NO PFAM MATCH---
WP_006130568.1 30675 31470 + 264PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
6.60E-43
1.00E-11
WP_006130569.1 31627 33217 + 529PF01039
PF06833
Carboxyl_trans
MdcE
Carboxyl transferase domain
Malonate decarboxylase gamma subunit (MdcE)
4.40E-182
6.00E-04
WP_006130570.1 34363 33631 - 243NO PFAM MATCH---
WP_006130571.1 34763 34478 - 94NO PFAM MATCH---
WP_006130572.1 34784 35000 + 71PF04149DUF397Domain of unknown function (DUF397)4.90E-21
WP_006130573.1 35218 36445 + 408PF00067p450Cytochrome P4503.80E-37
WP_228678951.1 37798 36607 - 396PF00067p450Cytochrome P4501.90E-06

Results for WP_005486705.1 [Streptomyces sp. SID5476] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028797007.1 212271 211668 - 200PF01725Ham1p_likeHam1 family1.80E-61
WP_028797008.1 212704 212305 - 132PF04012
PF07889
PF06009
PF12795
PspA_IM30
DUF1664
Laminin_II
MscS_porin
PspA/IM30 family
Protein of unknown function (DUF1664)
Laminin Domain II
Mechanosensitive ion channel porin domain
2.20E-05
2.60E-04
3.50E-04
5.00E-04
WP_005486689.1 213597 212859 - 245PF01138
PF03725
RNase_PH
RNase_PH_C
3' exoribonuclease family, domain 1
3' exoribonuclease family, domain 2
1.70E-25
6.20E-10
WP_020115552.1 213915 213681 - 77PF00367PTS_EIIBphosphotransferase system, EIIB2.20E-13
WP_005486693.1 215322 214035 - 428PF07690
PF05977
PF00083
MFS_1
MFS_3
Sugar_tr
Major Facilitator Superfamily
Transmembrane secretion effector
Sugar (and other) transporter
2.50E-27
3.40E-14
4.60E-06
WP_202500550.1 216683 215855 - 275PF04072LCMLeucine carboxyl methyltransferase1.80E-20
WP_005486699.1 217122 219015 + 630PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-07
1.50E-05
WP_005486703.1 219161 219296 + 44NO PFAM MATCH---
WP_005486705.1 219359 220592 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-08
WP_020115555.1 220479 221871 + 463PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-34
WP_202500551.1 221903 223880 + 658PF04055Radical_SAMRadical SAM superfamily1.10E-07
WP_202500552.1 223887 224736 + 282PF00561
PF12146
Abhydrolase_1
Hydrolase_4
alpha/beta hydrolase fold
Serine aminopeptidase, S33
3.20E-10
4.00E-06
WP_005486711.1 224732 226169 + 478PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
2.70E-07
2.60E-05
WP_020115557.1 226158 227391 + 410PF00067p450Cytochrome P4503.20E-13
WP_005486715.1 227398 229432 + 677PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-08
2.40E-05
WP_028797010.1 229573 230128 + 184PF09860DUF2087Uncharacterized protein conserved in bacteria (DUF2087)6.30E-22
WP_005486722.1 230132 231647 + 504PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
9.30E-100
4.50E-14

Results for WP_001942995.1 [Helicobacter pylori GAM239Bi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_230078066.1 1031 23 - 335NO PFAM MATCH---
WP_001925197.1 1971 1149 - 273PF00881NitroreductaseNitroreductase family6.40E-09
WP_001942995.1 3305 1982 - 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-40
WP_001942996.1 4219 3304 - 304NO PFAM MATCH---
WP_001941815.1 4411 4219 - 63NO PFAM MATCH---
WP_000271050.1 4597 4798 + 67INFERRED GENE---

Results for WP_005478952.1 [Streptomyces bottropensis ATCC 25435] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005478940.1 7141972 7140388 - 527PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
4.30E-95
1.30E-07
WP_028796953.1 7143027 7141968 - 352PF08541
PF08545
PF00108
ACP_syn_III_C
ACP_syn_III
Thiolase_N
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Thiolase, N-terminal domain
2.30E-12
1.40E-07
2.70E-04
WP_020115382.1 7143247 7144804 + 518PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
7.40E-52
1.10E-05
WP_020115383.1 7144943 7145471 + 175PF10604
PF03364
Polyketide_cyc2
Polyketide_cyc
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
1.40E-14
4.90E-06
WP_005478945.1 7145467 7145848 + 126PF10823DUF2568Protein of unknown function (DUF2568)9.30E-19
WP_237547323.1 7146761 7145954 - 268PF00975
PF12697
PF12146
Thioesterase
Abhydrolase_6
Hydrolase_4
Thioesterase domain
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.70E-30
3.90E-11
5.60E-05
WP_005478947.1 7147743 7146906 - 278PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
7.20E-46
5.50E-12
WP_005478950.1 7148039 7148366 + 108NO PFAM MATCH---
WP_005478952.1 7148362 7150738 + 791PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-99
WP_005478954.1 7150791 7152417 + 541PF00881NitroreductaseNitroreductase family4.60E-16
WP_005478955.1 7152496 7153750 + 417PF07730HisKA_3Histidine kinase1.30E-15
WP_005478956.1 7154488 7153882 - 201PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.20E-17
2.20E-16
5.70E-04
WP_005478957.1 7155618 7154586 - 343PF03756AfsAA-factor biosynthesis hotdog domain1.00E-41
WP_005478958.1 7157316 7155669 - 548PF01494
PF13450
PF00070
PF07992
FAD_binding_3
NAD_binding_8
Pyr_redox
Pyr_redox_2
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
5.90E-64
2.80E-05
3.80E-05
3.40E-04
WP_237547324.1 7158059 7157312 - 248PF13419
PF00702
PF13242
HAD_2
Hydrolase
Hydrolase_like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
5.30E-14
1.70E-12
9.50E-06
WP_005478964.1 7160938 7158586 - 783PF03176MMPLMMPL family4.00E-80
WP_020115384.1 7162075 7161043 - 343PF08450SGLSMP-30/Gluconolactonase/LRE-like region1.60E-09

Results for WP_001925199.1 [Helicobacter pylori] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001294250.1 3956 4061 + 35INFERRED GENE---
WP_187946583.1 6024 4041 - 660PF03432RelaxaseRelaxase/Mobilisation nuclease domain4.70E-15
WP_187946584.1 6361 6013 - 115PF05713MobCBacterial mobilisation protein (MobC)1.90E-06
WP_000917061.1 6519 6801 + 94INFERRED GENE---
WP_000889629.1 6809 7079 + 90INFERRED GENE---
WP_000271051.1 7053 7263 + 70INFERRED GENE---
WP_097700863.1 7449 7641 + 63NO PFAM MATCH---
WP_001942996.1 7641 8556 + 304NO PFAM MATCH---
WP_001925199.1 8555 9878 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-39
WP_001925197.1 9889 10711 + 273PF00881NitroreductaseNitroreductase family6.40E-09
WP_230078698.1 10694 11837 + 380NO PFAM MATCH---

Results for WP_001941817.1 [Helicobacter pylori GAMchJs117Ai] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000271050.1 60 256 + 65INFERRED GENE---
WP_001941815.1 442 634 + 63NO PFAM MATCH---
WP_001941816.1 634 1549 + 304NO PFAM MATCH---
WP_001941817.1 1548 2871 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-39
WP_001941818.1 2882 3704 + 273PF00881NitroreductaseNitroreductase family1.00E-08
WP_230078236.1 3822 4830 + 335NO PFAM MATCH---

Results for WP_001941817.1 [Helicobacter pylori GAMchJs117Ai] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000271050.1 60 256 + 65INFERRED GENE---
WP_001941815.1 442 634 + 63NO PFAM MATCH---
WP_001941816.1 634 1549 + 304NO PFAM MATCH---
WP_001941817.1 1548 2871 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-39
WP_001941818.1 2882 3704 + 273PF00881NitroreductaseNitroreductase family1.00E-08
WP_230078236.1 3822 4830 + 335NO PFAM MATCH---

Results for WP_001961890.1 [Helicobacter pylori GAM71Ai] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001961890.1 872 0 - 290PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-34
WP_001942996.1 1786 871 - 304NO PFAM MATCH---
WP_080385734.1 1977 1786 - 62NO PFAM MATCH---

Results for WP_001934599.1 [Helicobacter pylori] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_127964962.1 49849 48685 - 387PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
1.10E-19
1.60E-04
WP_232256218.1 50937 49860 - 358PF00899ThiFThiF family1.10E-21
WP_187928724.1 53207 51191 - 671PF03432RelaxaseRelaxase/Mobilisation nuclease domain5.80E-16
WP_187928725.1 53544 53196 - 115PF05713MobCBacterial mobilisation protein (MobC)8.10E-07
WP_187928726.1 53704 53986 + 93NO PFAM MATCH---
WP_187928727.1 53994 54264 + 89PF15738
PF05016
YafQ_toxin
ParE_toxin
Bacterial toxin of type II toxin-antitoxin system, YafQ
ParE toxin of type II toxin-antitoxin system, parDE
9.60E-29
1.80E-08
WP_001941815.1 54675 54867 + 63NO PFAM MATCH---
WP_232256220.1 54867 55521 + 217NO PFAM MATCH---
WP_001934599.1 55781 57104 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-39
WP_187928728.1 57115 57937 + 273PF00881NitroreductaseNitroreductase family9.90E-09
WP_232256221.1 57920 59063 + 380NO PFAM MATCH---
WP_097681738.1 59052 59754 + 233PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
3.50E-18
7.50E-10
1.90E-08
1.70E-05
3.20E-05
WP_001973251.1 59753 60509 + 252INFERRED GENE---
WP_187928730.1 70135 60571 - 3187PF03077VacA2Putative vacuolating cytotoxin9.80E-93
WP_000716810.1 70865 70295 - 189PF01856
PF13505
HP_OMP
OMP_b-brl
Helicobacter outer membrane protein
Outer membrane protein beta-barrel domain
1.10E-08
4.40E-06
WP_187928731.1 73948 70861 - 1028PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
0.00E+00
2.70E-14
WP_000984715.1 74665 73960 - 234PF13437
PF16576
PF13533
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Biotin-requiring enzyme
4.60E-15
1.00E-11
1.80E-06
2.50E-04

Results for WP_015432379.1 [Bibersteinia trehalosi USDA-ARS-USMARC-188] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025267110.1 1325566 1324582 - 327PF01409
PF02912
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA synthetases class II core domain (F)
Aminoacyl tRNA synthetase class II, N-terminal domain
8.00E-103
3.70E-27
WP_015432386.1 1325820 1326501 + 226PF01865PhoU_divProtein of unknown function DUF472.40E-66
WP_025267111.1 1326512 1327775 + 420PF01384PHO4Phosphate transporter family1.70E-109
WP_015432384.1 1327855 1328461 + 201PF08239SH3_3Bacterial SH3 domain1.50E-08
WP_025267112.1 1329787 1328749 - 345PF13416
PF01547
PF13343
PF13531
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.90E-40
3.20E-30
1.40E-29
4.80E-10
WP_015432382.1 1331448 1329972 - 491PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.30E-101
7.70E-06
WP_015432381.1 1332022 1331542 - 159PF13353
PF13394
Fer4_12
Fer4_14
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.00E-50
2.20E-34
WP_015432380.1 1334161 1332034 - 708PF13597
PF01228
PF03477
NRDD
Gly_radical
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
Glycine radical
ATP cone domain
1.30E-181
1.50E-27
4.00E-22
WP_015432379.1 1334453 1336217 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-78
2.00E-63
WP_025267113.1 1337264 1336253 - 336PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.00E-08
6.60E-06
3.20E-05
WP_025267114.1 1337738 1337414 - 107PF03840SecGPreprotein translocase SecG subunit1.00E-19
WP_015432375.1 1338808 1337926 - 293PF00701DHDPSDihydrodipicolinate synthetase family4.60E-99
WP_025267115.1 1339752 1338885 - 288PF01418
PF01380
PF13580
HTH_6
SIS
SIS_2
Helix-turn-helix domain, rpiR family
SIS domain
SIS domain
6.50E-25
2.70E-24
1.50E-10
WP_025267116.1 1340226 1339752 - 157PF04074DUF386YhcH/YjgK/YiaL3.60E-34
WP_025267117.1 1341200 1340396 - 267PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.30E-23
WP_025267118.1 1342635 1341264 - 456PF03553
PF13726
PF03600
PF03606
Na_H_antiporter
Na_H_antiport_2
CitMHS
DcuC
Na+/H+ antiporter family
Na+-H+ antiporter family
Citrate transporter
C4-dicarboxylate anaerobic carrier
3.50E-66
8.70E-23
5.30E-12
4.50E-04
WP_025267119.1 1343846 1342922 - 307PF01171ATP_bind_3PP-loop family4.90E-15

Results for WP_015469613.1 [Pseudobdellovibrio exovorus JSS] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_148284938.1 888871 890416 + 514PF03023
PF14667
PF01554
MurJ
Polysacc_synt_C
MatE
Lipid II flippase MurJ
Polysaccharide biosynthesis C-terminal domain
MatE
6.90E-97
2.20E-06
3.90E-05
WP_015469606.1 891256 890464 - 263PF02900LigBCatalytic LigB subunit of aromatic ring-opening dioxygenase2.50E-30
WP_015469607.1 891891 891288 - 200PF04264YceIYceI-like domain6.20E-45
WP_041575080.1 891930 892899 + 322PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.80E-39
1.60E-18
WP_015469609.1 893453 892895 - 185PF14237
PF07238
GYF_2
PilZ
GYF domain 2
PilZ domain
5.90E-10
1.10E-09
WP_015469610.1 894353 893546 - 268PF03819
PF01503
PF12643
MazG
PRA-PH
MazG-like
MazG nucleotide pyrophosphohydrolase domain
Phosphoribosyl-ATP pyrophosphohydrolase
MazG-like family
2.60E-34
4.80E-09
1.50E-04
WP_015469611.1 894367 894844 + 158PF02130YbeYEndoribonuclease YbeY9.60E-36
WP_015469612.1 895950 894840 - 369PF02518
PF00512
HATPase_c
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
4.20E-15
8.90E-04
WP_015469613.1 896879 895946 - 310PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-09
WP_015469614.1 898255 896857 - 465NO PFAM MATCH---
WP_200860201.1 903877 903574 - 100PF09827CRISPR_Cas2CRISPR associated protein Cas22.70E-17
WP_015469617.1 904784 903890 - 297PF01867
PF10263
Cas_Cas1
SprT-like
CRISPR associated protein Cas1
SprT-like family
5.60E-30
7.50E-04
WP_015469618.1 907864 904780 - 1027PF13395
PF18541
PF18470
HNH_4
RuvC_III
Cas9_a
HNH endonuclease
RuvC endonuclease subdomain 3
Cas9 alpha-helical lobe domain
5.60E-21
7.30E-19
3.80E-07
WP_235044643.1 908126 909279 + 383PF03462
PF00472
PCRF
RF-1
PCRF domain
RF-1 domain
3.00E-60
3.40E-41
WP_015469620.1 909275 910490 + 404PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.20E-17
8.70E-14
WP_015469621.1 910482 911169 + 228PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.10E-33
2.20E-05
7.30E-04
WP_015469622.1 911224 913618 + 797PF07244
PF01103
PF08479
POTRA
Omp85
POTRA_2
Surface antigen variable number repeat
Omp85 superfamily domain
POTRA domain, ShlB-type
1.30E-59
1.30E-55
2.90E-04

Results for WP_015491993.1 [Thermoplasmatales archaeon BRNA1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015491985.1 412751 411833 - 305PF00185
PF02729
OTCace
OTCace_N
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
1.30E-54
4.50E-45
WP_157627970.1 413306 417863 + 1518PF18676
PF09479
MBG_2
Flg_new
MBG domain (YGX type)
Listeria-Bacteroides repeat domain (List_Bact_rpt)
1.40E-16
2.40E-08
WP_015491987.1 417959 418670 + 236PF02596DUF169Uncharacterised ArCR, COG20432.60E-46
WP_015491988.1 418986 420318 + 443PF02241
PF02783
MCR_beta
MCR_beta_N
Methyl-coenzyme M reductase beta subunit, C-terminal domain
Methyl-coenzyme M reductase beta subunit, N-terminal domain
1.90E-131
4.90E-76
WP_015491989.1 420391 420763 + 123PF02505MCR_DMethyl-coenzyme M reductase operon protein D7.00E-30
WP_015491990.1 420765 421545 + 259PF02240MCR_gammaMethyl-coenzyme M reductase gamma subunit7.90E-126
WP_015491991.1 421546 423205 + 552PF02745
PF02249
MCR_alpha_N
MCR_alpha
Methyl-coenzyme M reductase alpha subunit, N-terminal domain
Methyl-coenzyme M reductase alpha subunit, C-terminal domain
3.80E-140
6.00E-62
WP_157627971.1 423213 423492 + 92PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)2.70E-25
WP_015491993.1 424855 423628 - 408PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-84
WP_015491994.1 425563 424903 - 219PF19700DUF6198Family of unknown function (DUF6198)4.30E-16
WP_015491995.1 426314 425675 - 212NO PFAM MATCH---
WP_015491996.1 427328 426362 - 321PF09884
PF14544
DUF2111
DUF4443
Uncharacterized protein conserved in archaea (DUF2111)
Domain of unknown function (DUF4443)
3.30E-32
1.50E-30
WP_015491997.1 427485 429126 + 546PF00005
PF13401
PF13555
PF13304
PF13191
ABC_tran
AAA_22
AAA_29
AAA_21
AAA_16
ABC transporter
AAA domain
P-loop containing region of AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
3.20E-50
2.30E-05
3.60E-05
3.90E-05
8.00E-05
WP_015491998.1 429138 429759 + 206PF04609MCR_CMethyl-coenzyme M reductase operon protein C2.90E-05
WP_015491999.1 429755 431270 + 504NO PFAM MATCH---
WP_015492000.1 431266 431692 + 141PF09875DUF2102Uncharacterized protein conserved in archaea (DUF2102)2.10E-38
WP_015492001.1 431688 432138 + 149PF09885DUF2112Uncharacterized protein conserved in archaea (DUF2112)7.00E-63

Results for WP_015016859.1 [Streptococcus dysgalactiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046177190.1 1551 1947 + 131NO PFAM MATCH---
WP_046177189.1 2164 2530 + 121PF05973Gp49Phage derived protein Gp49-like (DUF891)1.10E-22
WP_027971722.1 2519 2816 + 98PF01381
PF13744
PF13560
PF13443
PF12844
HTH_3
HTH_37
HTH_31
HTH_26
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.60E-14
2.50E-08
3.20E-06
1.40E-04
7.90E-04
WP_046177188.1 2837 4043 + 401NO PFAM MATCH---
WP_165626014.1 4049 4217 + 55NO PFAM MATCH---
WP_012766767.1 5114 5276 + 53NO PFAM MATCH---
WP_003061458.1 5494 6445 + 316PF00881NitroreductaseNitroreductase family6.00E-14
WP_046177187.1 6441 7506 + 354NO PFAM MATCH---
WP_015016859.1 7518 8877 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-43
WP_046177186.1 8851 9526 + 224PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like9.60E-11
WP_015016860.1 9522 10209 + 228PF19393DUF5968Family of unknown function (DUF5968)2.30E-21
WP_046177185.1 10229 11153 + 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.70E-33
1.40E-14
2.90E-04
WP_046177184.1 11161 12289 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-25
5.30E-20
5.60E-11
WP_003057434.1 12285 13404 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
2.00E-41
6.40E-20
WP_153227912.1 13759 16585 + 941PF19580
PF03372
PF01336
PF18942
PF00746
Exo_endo_phos_3
Exo_endo_phos
tRNA_anti-codon
DUF5689
Gram_pos_anchor
Endonuclease/Exonuclease/phosphatase family
Endonuclease/Exonuclease/phosphatase family
OB-fold nucleic acid binding domain
Family of unknown function (DUF5689)
LPXTG cell wall anchor motif
1.40E-06
7.80E-06
2.30E-05
5.90E-05
1.50E-04
WP_003050124.1 16915 17419 + 167PF06177QueTQueT transporter3.20E-33
WP_046177182.1 17565 19524 + 652PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
2.90E-115
3.80E-35
1.40E-16
4.60E-14
1.80E-09

Results for WP_042230396.1 [Lactococcus sp. SK2-659] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015426493.1 27931 26842 - 362PF02350
PF13477
PF04007
PF02684
Epimerase_2
Glyco_trans_4_2
DUF354
LpxB
UDP-N-acetylglucosamine 2-epimerase
Glycosyl transferase 4-like
Protein of unknown function (DUF354)
Lipid-A-disaccharide synthetase
3.50E-108
1.90E-05
1.10E-04
2.10E-04
WP_225513455.1 28112 28733 + 206PF09479Flg_newListeria-Bacteroides repeat domain (List_Bact_rpt)8.70E-04
WP_015426495.1 29548 29146 - 133PF11457DUF3021Protein of unknown function (DUF3021)1.50E-04
WP_015426496.1 30069 29544 - 174PF04397LytTRLytTr DNA-binding domain2.10E-19
WP_015426497.1 30835 30094 - 246PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.10E-08
9.70E-07
WP_042230733.1 31514 30827 - 228PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
4.60E-26
2.00E-06
WP_042230392.1 32472 31503 - 322NO PFAM MATCH---
WP_042230394.1 33277 32473 - 267PF00881NitroreductaseNitroreductase family9.90E-14
WP_042230396.1 34516 33289 - 408PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.70E-36
WP_225513456.1 35370 34512 - 285NO PFAM MATCH---
WP_168694148.1 35573 35432 - 46NO PFAM MATCH---
WP_136122581.1 36211 35923 - 95NO PFAM MATCH---
WP_015426498.1 36408 36786 + 125NO PFAM MATCH---
WP_015426499.1 37468 37102 - 121PF00542
PF16320
Ribosomal_L12
Ribosomal_L12_N
Ribosomal protein L7/L12 C-terminal domain
Ribosomal protein L7/L12 dimerisation domain
9.80E-29
4.60E-18
WP_225513457.1 38053 37537 - 171PF00466Ribosomal_L10Ribosomal protein L101.30E-27
WP_003130209.1 38463 38274 - 62NO PFAM MATCH---
WP_015426501.1 39237 38478 - 252PF00717
PF01381
PF12844
PF13560
PF13443
Peptidase_S24
HTH_3
HTH_19
HTH_31
HTH_26
Peptidase S24-like
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
2.50E-24
1.90E-13
2.00E-10
5.90E-10
9.40E-05

Results for WP_015491343.1 [Clavibacter michiganensis subsp. nebraskensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015491335.1 2870371 2869597 - 257PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.70E-29
5.90E-26
WP_015491336.1 2871220 2870428 - 263PF20225
PF14559
PF13428
DUF6584
TPR_19
TPR_14
Family of unknown function (DUF6584)
Tetratricopeptide repeat
Tetratricopeptide repeat
2.50E-05
6.20E-05
1.50E-04
WP_015491337.1 2872411 2871382 - 342PF03741TerCIntegral membrane protein TerC family2.40E-47
WP_015491338.1 2873482 2872543 - 312PF07676
PF00930
PD40
DPPIV_N
WD40-like Beta Propeller Repeat
Dipeptidyl peptidase IV (DPP IV) N-terminal region
1.10E-16
9.30E-04
WP_015491339.1 2874540 2873478 - 353PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.70E-45
WP_015491340.1 2875463 2874656 - 268PF12698ABC2_membrane_3ABC-2 family transporter protein1.90E-04
WP_015491341.1 2876440 2875459 - 326PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
7.20E-20
5.70E-06
1.10E-05
8.00E-04
WP_015491342.1 2877401 2876432 - 322PF00881NitroreductaseNitroreductase family7.30E-16
WP_015491343.1 2878722 2877459 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-51
WP_249959033.1 2879570 2878718 - 283NO PFAM MATCH---
WP_015491345.1 2879802 2879580 - 73NO PFAM MATCH---
WP_041465584.1 2879974 2880637 + 220PF09588YqaJYqaJ-like viral recombinase domain1.10E-05
WP_012299881.1 2880906 2881862 + 318INFERRED GENE---
WP_012299880.1 2881868 2882420 + 184INFERRED GENE---
WP_015491347.1 2883265 2882578 - 228PF00687Ribosomal_L1Ribosomal protein L1p/L10e family1.10E-49
WP_012039476.1 2883797 2883365 - 143PF03946
PF00298
Ribosomal_L11_N
Ribosomal_L11
Ribosomal protein L11, N-terminal domain
Ribosomal protein L11, RNA binding domain
2.80E-29
2.70E-27
WP_015491348.1 2884873 2883850 - 340PF02357NusGTranscription termination factor nusG2.90E-24

Results for WP_006636650.1 [Bacillus sonorensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006636642.1 109410 109518 + 35PF17444YhdXUncharacterized YhdX-like1.30E-25
WP_006636643.1 109752 110832 + 359PF00924MS_channelMechanosensitive ion channel8.00E-59
WP_006636644.1 110865 111615 + 249PF02146SIR2Sir2 family9.90E-51
WP_006636645.1 112488 111990 - 165PF00583
PF13673
PF13508
PF13527
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_9
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
6.90E-13
9.90E-12
9.10E-10
1.60E-08
5.40E-07
WP_006636646.1 113523 112623 - 299PF01522Polysacc_deac_1Polysaccharide deacetylase6.50E-27
WP_006636647.1 113825 114677 + 283PF01063Aminotran_4Amino-transferase class IV1.30E-51
WP_006636648.1 116079 114717 - 453PF03553Na_H_antiporterNa+/H+ antiporter family1.30E-64
WP_006636649.1 116305 117286 + 326PF01263
PF14486
Aldose_epim
DUF4432
Aldose 1-epimerase
Domain of unknown function (DUF4432)
9.30E-43
2.30E-04
WP_006636650.1 119517 117582 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-89
WP_270568274.1 121385 119516 - 622NO PFAM MATCH---
WP_241748946.1 121686 121407 - 92NO PFAM MATCH---
WP_006636653.1 122939 122438 - 166PF00582UspUniversal stress protein family2.00E-33
WP_006636654.1 123484 125239 + 584PF00664
PF00005
PF02463
ABC_membrane
ABC_tran
SMC_N
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
1.20E-43
5.50E-29
8.10E-06
WP_006636655.1 125235 127257 + 673PF00664
PF00005
PF02463
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.70E-43
3.00E-32
7.10E-09
1.60E-04
WP_029419048.1 127907 127286 - 206PF13460
PF05368
PF01370
NAD_binding_10
NmrA
Epimerase
NAD(P)H-binding
NmrA-like family
NAD dependent epimerase/dehydratase family
1.70E-29
1.50E-04
4.40E-04
WP_167373800.1 128075 127931 - 47NO PFAM MATCH---
WP_006636657.1 128395 128194 - 66PF00269SASPSmall, acid-soluble spore proteins, alpha/beta type7.60E-21

Results for WP_005985368.1 [Desulfocurvibacter africanus PCS] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005985354.1 129290 130259 + 322PF05496
PF17864
PF05491
PF00004
PF07728
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Holliday junction DNA helicase RuvB P-loop domain
RuvB AAA lid domain
RuvB C-terminal winged helix domain
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
3.90E-74
5.00E-29
5.10E-26
5.60E-18
1.70E-06
WP_005985355.1 130462 131128 + 221PF02511Thy1Thymidylate synthase complementing protein6.90E-45
WP_005985356.1 131132 131882 + 249NO PFAM MATCH---
WP_005985357.1 133577 132212 - 454PF00308
PF08299
PF11638
Bac_DnaA
Bac_DnaA_C
DnaA_N
Bacterial dnaA protein
Bacterial dnaA protein helix-turn-helix
DnaA N-terminal domain
2.40E-56
4.40E-20
2.80E-15
WP_005985361.1 135403 134296 - 368PF13692
PF00534
PF13439
PF13579
PF13477
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_4_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
Glycosyl transferase 4-like
1.80E-16
5.90E-16
1.80E-13
6.10E-11
6.60E-06
WP_005985362.1 136033 135670 - 120PF02391MoaEMoaE protein5.50E-09
WP_005985364.1 136094 138902 + 935PF07719TPR_2Tetratricopeptide repeat1.50E-07
WP_005985367.1 139429 139111 - 105PF04358DsrCDsrC like protein7.90E-37
WP_005985368.1 141423 139686 - 578PF02624
PF00515
PF07719
PF13181
PF13432
YcaO
TPR_1
TPR_2
TPR_8
TPR_16
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
6.40E-54
5.30E-14
5.30E-12
1.90E-07
2.40E-07
WP_005985370.1 142213 141427 - 261PF10294
PF05175
PF13847
PF13649
PF08242
Methyltransf_16
MTS
Methyltransf_31
Methyltransf_25
Methyltransf_12
Lysine methyltransferase
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.70E-18
6.50E-08
1.00E-05
5.80E-05
8.40E-05
WP_005985372.1 143436 142671 - 254PF04016
PF13938
DUF364
DUF4213
Putative heavy-metal chelation
Putative heavy-metal chelation
1.40E-40
2.50E-04
WP_005985374.1 143653 144028 + 124PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger3.50E-14
WP_005985376.1 144098 145649 + 516PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
6.70E-15
2.10E-09
WP_005985378.1 145844 146831 + 328PF02562
PF13604
PF13245
PF01695
PhoH
AAA_30
AAA_19
IstB_IS21
PhoH-like protein
AAA domain
AAA domain
IstB-like ATP binding protein
9.00E-95
1.20E-09
4.60E-06
2.30E-05
WP_005985381.1 146802 149124 + 773PF07697
PF01966
PF07698
7TMR-HDED
HD
7TM-7TMR_HD
7TM-HD extracellular
HD domain
7TM receptor with intracellular HD hydrolase
6.30E-40
3.50E-17
3.20E-16
WP_005985383.1 149127 149610 + 160PF02130YbeYEndoribonuclease YbeY1.70E-21
WP_005985385.1 149651 150098 + 148PF00472RF-1RF-1 domain8.80E-18

Results for WP_001941817.1 [Helicobacter pylori GAMchJs117Ai] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000271050.1 60 256 + 65INFERRED GENE---
WP_001941815.1 442 634 + 63NO PFAM MATCH---
WP_001941816.1 634 1549 + 304NO PFAM MATCH---
WP_001941817.1 1548 2871 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-39
WP_001941818.1 2882 3704 + 273PF00881NitroreductaseNitroreductase family1.00E-08
WP_230078236.1 3822 4830 + 335NO PFAM MATCH---

Results for WP_005988562.1 [Desulfocurvibacter africanus PCS] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005988544.1 299772 299538 - 77PF13083KH_4KH domain3.20E-24
WP_005988547.1 300100 299860 - 79PF00886Ribosomal_S16Ribosomal protein S165.50E-22
WP_005988549.1 301690 300163 - 508PF00448
PF02978
PF02881
PF01656
PF06414
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
SRP54-type protein, GTPase domain
Signal peptide binding domain
SRP54-type protein, helical bundle domain
CobQ/CobB/MinD/ParA nucleotide binding domain
Zeta toxin
9.30E-73
1.20E-31
9.70E-24
8.80E-05
1.20E-04
WP_238550243.1 302200 303244 + 347PF19103DUF5790Family of unknown function (DUF5790)4.20E-04
WP_005988555.1 303806 303353 - 150PF13577
PF02136
SnoaL_4
NTF2
SnoaL-like domain
Nuclear transport factor 2 (NTF2) domain
6.80E-05
2.10E-04
WP_005988557.1 305318 303992 - 441PF00850Hist_deacetylHistone deacetylase domain8.50E-63
WP_005988558.1 306988 305311 - 558PF01968
PF05378
PF14450
PF01869
Hydantoinase_A
Hydant_A_N
FtsA
BcrAD_BadFG
Hydantoinase/oxoprolinase
Hydantoinase/oxoprolinase N-terminal region
Cell division protein FtsA
BadF/BadG/BcrA/BcrD ATPase family
2.10E-47
2.70E-30
8.90E-06
6.10E-05
WP_238550249.1 307464 307125 - 112NO PFAM MATCH---
WP_005988562.1 307754 309461 + 568PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-49
WP_005988564.1 309970 311212 + 413PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin1.30E-23
WP_005988566.1 311344 312175 + 276PF02110
PF01256
HK
Carb_kinase
Hydroxyethylthiazole kinase family
Carbohydrate kinase
7.10E-74
4.40E-05
WP_238550244.1 312403 312985 + 193NO PFAM MATCH---
WP_005988570.1 313172 314849 + 558PF08269
PF17200
PF02518
PF00672
PF00512
dCache_2
sCache_2
HATPase_c
HAMP
HisKA
Cache domain
Single Cache domain 2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
His Kinase A (phospho-acceptor) domain
2.50E-19
6.80E-19
4.40E-17
8.50E-13
2.10E-10
WP_005988572.1 314848 316090 + 413PF09949APP1_catPhosphatidate phosphatase APP1, catalytic domain1.10E-44
WP_005988574.1 316201 317323 + 373PF03631Virul_fac_BrkBVirulence factor BrkB2.00E-63
WP_005988576.1 317605 319156 + 516PF00158
PF14532
PF13185
PF02954
PF01590
Sigma54_activat
Sigma54_activ_2
GAF_2
HTH_8
GAF
Sigma-54 interaction domain
Sigma-54 interaction domain
GAF domain
Bacterial regulatory protein, Fis family
GAF domain
1.60E-71
5.90E-21
1.10E-15
2.60E-13
9.40E-13
WP_005988578.1 319497 320817 + 439PF13401
PF13604
PF13191
PF13238
PF05489
AAA_22
AAA_30
AAA_16
AAA_18
Phage_tail_X
AAA domain
AAA domain
AAA ATPase domain
AAA domain
Phage Tail Protein X
1.10E-12
3.90E-07
2.60E-06
4.80E-06
6.10E-06

Results for WP_001925199.1 [Helicobacter pylori] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001294250.1 3956 4061 + 35INFERRED GENE---
WP_187946583.1 6024 4041 - 660PF03432RelaxaseRelaxase/Mobilisation nuclease domain4.70E-15
WP_187946584.1 6361 6013 - 115PF05713MobCBacterial mobilisation protein (MobC)1.90E-06
WP_000917061.1 6519 6801 + 94INFERRED GENE---
WP_000889629.1 6809 7079 + 90INFERRED GENE---
WP_000271051.1 7053 7263 + 70INFERRED GENE---
WP_097700863.1 7449 7641 + 63NO PFAM MATCH---
WP_001942996.1 7641 8556 + 304NO PFAM MATCH---
WP_001925199.1 8555 9878 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-39
WP_001925197.1 9889 10711 + 273PF00881NitroreductaseNitroreductase family6.40E-09
WP_230078698.1 10694 11837 + 380NO PFAM MATCH---

Results for WP_008939946.1 [Marinobacter santoriniensis NKSG1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008939938.1 132093 132774 + 226PF14342DUF4396Domain of unknown function (DUF4396)7.40E-25
WP_008939939.1 132999 132786 - 70NO PFAM MATCH---
WP_008939940.1 134367 133026 - 446PF00990
PF08447
PF13185
PF00989
PF08448
GGDEF
PAS_3
GAF_2
PAS
PAS_4
Diguanylate cyclase, GGDEF domain
PAS fold
GAF domain
PAS fold
PAS fold
5.30E-46
8.40E-15
4.30E-14
5.50E-11
6.20E-10
WP_008939941.1 134555 135755 + 399PF07690
PF06779
MFS_1
MFS_4
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
2.30E-36
8.60E-09
WP_008939942.1 135881 138467 + 861PF00563
PF07695
PF07696
PF00990
EAL
7TMR-DISM_7TM
7TMR-DISMED2
GGDEF
EAL domain
7TM diverse intracellular signalling
7TMR-DISM extracellular 2
Diguanylate cyclase, GGDEF domain
5.90E-72
8.20E-42
3.00E-34
3.40E-16
WP_008939943.1 139290 138486 - 267PF02900LigBCatalytic LigB subunit of aromatic ring-opening dioxygenase1.70E-35
WP_008939944.1 139837 139357 - 159PF07681
PF04173
DoxX
DoxD
DoxX
TQO small subunit DoxD
2.40E-22
2.20E-04
WP_008939945.1 139999 140908 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.00E-42
6.40E-21
WP_008939946.1 143113 140917 - 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.50E-77
8.00E-73
1.50E-09
WP_008939947.1 143240 145991 + 916PF00122
PF00689
PF00702
PF13246
PF00690
E1-E2_ATPase
Cation_ATPase_C
Hydrolase
Cation_ATPase
Cation_ATPase_N
E1-E2 ATPase
Cation transporting ATPase, C-terminus
haloacid dehalogenase-like hydrolase
Cation transport ATPase (P-type)
Cation transporter/ATPase, N-terminus
5.90E-53
1.30E-41
7.10E-23
1.40E-20
1.30E-16
WP_008939948.1 146050 146422 + 123PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
3.40E-11
1.40E-04
WP_008939949.1 147196 146452 - 247PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-18
WP_008939950.1 148143 147195 - 315PF00005
PF06414
ABC_tran
Zeta_toxin
ABC transporter
Zeta toxin
2.90E-34
6.80E-05
WP_008939951.1 149322 148164 - 385PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component6.60E-19
WP_040886945.1 150249 149325 - 307PF04069OpuACSubstrate binding domain of ABC-type glycine betaine transport system1.00E-55
WP_008939953.1 150426 151230 + 267PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.70E-48
1.30E-23
WP_008939954.1 151719 151236 - 160PF07883
PF01050
PF05899
Cupin_2
MannoseP_isomer
Cupin_3
Cupin domain
Mannose-6-phosphate isomerase
EutQ-like cupin domain
4.40E-18
7.00E-07
7.10E-07

Results for WP_004241763.1 [Morganella morganii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_036421741.1 386780 385796 - 327PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase2.80E-119
WP_004241767.1 388538 386792 - 581PF00664
PF00005
PF02463
PF13191
PF06414
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
Zeta toxin
3.50E-58
1.80E-36
3.40E-12
6.50E-06
2.40E-04
WP_004241766.1 390876 388575 - 766PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
2.10E-46
9.30E-13
WP_004235823.1 391537 391252 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.20E-29
7.40E-08
WP_004235822.1 393276 391602 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
5.40E-100
1.30E-10
3.10E-06
WP_004235820.1 394192 393502 - 229PF02224
PF13189
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
6.10E-80
6.80E-07
2.40E-04
4.20E-04
WP_004235819.1 395586 394308 - 425PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.00E-147
WP_004241764.1 396757 395671 - 361PF00266Aminotran_5Aminotransferase class-V4.90E-61
WP_004241763.1 397110 398892 + 593PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.50E-87
1.10E-66
WP_004235816.1 399198 400059 + 286PF01226Form_Nir_transFormate/nitrite transporter1.40E-74
WP_004235815.1 400113 402396 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-204
7.50E-43
WP_004235814.1 402500 403241 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.30E-30
1.30E-18
5.80E-06
WP_004241761.1 403543 404710 + 388PF03497Anthrax_toxAAnthrax toxin LF subunit1.80E-70
WP_004235811.1 406079 404786 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.40E-37
6.10E-32
WP_239558860.1 407582 406295 - 428PF12002
PF16193
PF00004
PF05496
PF13191
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA ATPase domain
1.00E-63
1.40E-23
3.00E-16
3.10E-15
3.20E-07
WP_004241757.1 408258 407646 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.40E-54
4.20E-04
WP_004241756.1 411889 408319 - 1189PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
7.80E-72
7.60E-44
1.50E-28
4.30E-27
1.50E-05

Results for WP_007269626.1 [Paeniglutamicibacter gangotriensis Lz1y] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007269617.1 431848 431473 - 124NO PFAM MATCH---
WP_007269618.1 432415 432931 + 171NO PFAM MATCH---
WP_007269619.1 432976 433510 + 177NO PFAM MATCH---
WP_007269620.1 433548 434154 + 201PF10502Peptidase_S26Signal peptidase, peptidase S262.60E-05
WP_007269621.1 434150 434642 + 163NO PFAM MATCH---
WP_007269623.1 436323 436494 + 56NO PFAM MATCH---
WP_007269624.1 436532 437552 + 339PF00005
PF13304
PF13604
PF02463
ABC_tran
AAA_21
AAA_30
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RecF/RecN/SMC N terminal domain
1.90E-27
7.00E-14
6.10E-05
1.30E-04
WP_007269625.1 437548 438580 + 343PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.80E-20
3.80E-13
4.70E-05
WP_007269626.1 438594 439920 + 441PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-60
WP_007269627.1 439953 440637 + 227NO PFAM MATCH---
WP_007269628.1 440629 442234 + 534PF00881NitroreductaseNitroreductase family7.60E-04
WP_007269629.1 442230 442974 + 247PF00881NitroreductaseNitroreductase family4.10E-11
WP_007269630.1 443063 443240 + 58NO PFAM MATCH---
WP_007269631.1 443294 443468 + 57NO PFAM MATCH---
WP_007269632.1 443515 443689 + 57NO PFAM MATCH---
WP_007269633.1 443780 444923 + 380PF02163Peptidase_M50Peptidase family M501.60E-06
WP_043472629.1 444919 447331 + 803PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus4.10E-07

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_006287214.1 [Paenibacillus popilliae ATCC 14706] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042228982.1 9785 8522 - 420PF00005
PF00571
PF13191
PF09818
PF13304
ABC_tran
CBS
AAA_16
ABC_ATPase
AAA_21
ABC transporter
CBS domain
AAA ATPase domain
ATPase of the ABC class
AAA domain, putative AbiEii toxin, Type IV TA system
2.90E-35
1.60E-07
8.70E-05
1.90E-04
3.90E-04
WP_006287205.1 10144 10711 + 188NO PFAM MATCH---
WP_006287206.1 11364 10722 - 213PF03006HlyIIIHaemolysin-III related1.10E-40
WP_006287208.1 11662 12550 + 295PF00274GlycolyticFructose-bisphosphate aldolase class-I1.20E-11
WP_006287209.1 12881 13379 + 165NO PFAM MATCH---
WP_148277957.1 13928 13424 - 167NO PFAM MATCH---
WP_093471064.1 14136 15744 + 535PF01293PEPCK_ATPPhosphoenolpyruvate carboxykinase2.90E-221
WP_006287213.1 15858 17412 + 517NO PFAM MATCH---
WP_006287214.1 17408 19346 + 645PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-79
WP_234399847.1 19413 19530 + 38NO PFAM MATCH---
WP_267879077.1 19849 19714 - 44NO PFAM MATCH---
WP_006287215.1 20612 20072 - 179PF00155Aminotran_1_2Aminotransferase class I and II1.30E-11
WP_006287216.1 20816 21446 + 209PF12900
PF04299
PF01243
Pyridox_ox_2
FMN_bind_2
Putative_PNPOx
Pyridoxamine 5'-phosphate oxidase
Putative FMN-binding domain
Pyridoxamine 5'-phosphate oxidase
8.00E-24
2.80E-12
1.50E-11
WP_010898675.1 21521 21645 + 41INFERRED GENE---
WP_042228989.1 21790 22237 + 148PF02082Rrf2Iron-dependent Transcriptional regulator1.70E-33
WP_006287221.1 22535 24281 + 581PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
3.60E-43
6.50E-17
WP_006287223.1 24622 26368 + 581PF00015
PF00672
PF19111
PF02743
PF18947
MCPsignal
HAMP
DUF5798
dCache_1
HAMP_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
Family of unknown function (DUF5798)
Cache domain
HAMP domain
3.50E-45
7.70E-17
4.10E-05
1.10E-04
1.90E-04

Results for WP_015504295.1 [Candidatus Methanomethylophilus alvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015504287.1 357772 358819 + 348PF02371
PF01548
Transposase_20
DEDD_Tnp_IS110
Transposase IS116/IS110/IS902 family
Transposase
2.30E-16
3.10E-06
WP_015504288.1 360068 359150 - 305PF00185
PF02729
OTCace
OTCace_N
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
5.10E-54
8.20E-45
WP_015504289.1 360180 360894 + 237PF02596DUF169Uncharacterised ArCR, COG20434.10E-45
WP_015504290.1 361184 362513 + 442PF02241
PF02783
MCR_beta
MCR_beta_N
Methyl-coenzyme M reductase beta subunit, C-terminal domain
Methyl-coenzyme M reductase beta subunit, N-terminal domain
8.50E-135
5.50E-77
WP_022532232.1 362531 362957 + 141PF02505MCR_DMethyl-coenzyme M reductase operon protein D1.40E-31
WP_015504292.1 362959 363736 + 258PF02240MCR_gammaMethyl-coenzyme M reductase gamma subunit9.50E-131
WP_015504293.1 363737 365402 + 554PF02745
PF02249
MCR_alpha_N
MCR_alpha
Methyl-coenzyme M reductase alpha subunit, N-terminal domain
Methyl-coenzyme M reductase alpha subunit, C-terminal domain
2.90E-142
6.90E-61
WP_015504294.1 365408 365687 + 92PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)5.60E-24
WP_015504295.1 367065 365832 - 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-83
WP_015504296.1 367806 367140 - 221PF19700DUF6198Family of unknown function (DUF6198)1.60E-13
WP_015504297.1 368536 367927 - 202NO PFAM MATCH---
WP_015504298.1 369551 368585 - 321PF09884
PF14544
DUF2111
DUF4443
Uncharacterized protein conserved in archaea (DUF2111)
Domain of unknown function (DUF4443)
1.40E-31
7.20E-29
WP_015504299.1 369756 371373 + 538PF00005
PF03193
PF13555
PF13401
PF13604
ABC_tran
RsgA_GTPase
AAA_29
AAA_22
AAA_30
ABC transporter
RsgA GTPase
P-loop containing region of AAA domain
AAA domain
AAA domain
9.40E-49
3.70E-05
4.50E-05
3.30E-04
5.90E-04
WP_015504300.1 371386 372007 + 206PF04609MCR_CMethyl-coenzyme M reductase operon protein C1.50E-06
WP_015504301.1 372003 373515 + 503NO PFAM MATCH---
WP_015504302.1 373511 373937 + 141PF09875DUF2102Uncharacterized protein conserved in archaea (DUF2102)2.80E-39
WP_015504303.1 373933 374371 + 145PF09885DUF2112Uncharacterized protein conserved in archaea (DUF2112)9.10E-64

Results for WP_012701362.1 [Azotobacter vinelandii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076611376.1 0 320 + 106INFERRED GENE---
WP_012051434.1 517 994 + 159INFERRED GENE---
WP_072432847.1 1258 1711 + 150PF13412
PF13404
PF01037
PF12802
PF13545
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
HTH_Crp_2
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
Lrp/AsnC ligand binding domain
MarR family
Crp-like helix-turn-helix domain
8.10E-17
7.40E-15
8.90E-12
3.00E-05
3.90E-05
WP_236616154.1 3034 1807 - 408PF00266
PF00155
PF01053
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Aminotransferase class-V
Aminotransferase class I and II
Cys/Met metabolism PLP-dependent enzyme
3.10E-52
4.90E-09
2.70E-08
WP_231876453.1 3243 3552 + 102NO PFAM MATCH---
WP_076611276.1 3742 4332 + 196INFERRED GENE---
WP_175556023.1 5553 4368 - 394PF03486
PF01266
PF00890
PF13738
PF07992
HI0933_like
DAO
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
HI0933-like protein
FAD dependent oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
2.50E-151
4.70E-11
6.20E-11
8.00E-10
7.60E-08
WP_012701362.1 5761 7966 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.30E-73
3.80E-73
8.50E-08
WP_076611188.1 8184 8555 + 123INFERRED GENE---
WP_012701361.1 8736 10740 + 667PF11896
PF00128
PF14871
GlgE_dom_N_S
Alpha-amylase
GHL6
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Alpha amylase, catalytic domain
Hypothetical glycosyl hydrolase 6
7.40E-52
2.20E-06
3.50E-04
WP_012701360.1 10767 14094 + 1108PF00128
PF16657
PF18085
Alpha-amylase
Malt_amylase_C
Mak_N_cap
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
Maltokinase N-terminal cap domain
9.80E-72
6.90E-28
2.00E-07
WP_012701359.1 14090 16292 + 733PF02922
PF02806
PF00128
CBM_48
Alpha-amylase_C
Alpha-amylase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, C-terminal all-beta domain
Alpha amylase, catalytic domain
9.80E-23
2.60E-22
1.60E-12
WP_012701358.1 16559 17621 + 353PF01339
PF00072
CheB_methylest
Response_reg
CheB methylesterase
Response regulator receiver domain
2.30E-62
2.20E-25
WP_012701357.1 17950 19678 + 575PF00015
PF00672
PF02203
PF19794
MCPsignal
HAMP
TarH
DUF6278
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
Tar ligand binding domain homologue
Family of unknown function (DUF6278)
2.30E-54
1.30E-11
2.80E-08
3.10E-04
WP_139239976.1 19819 20727 + 303PF00672HAMPHAMP domain1.90E-10

Results for WP_015591994.1 [Bacillus sp. 1NLA3E] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015591986.1 148278 149118 + 279PF00005
PF02463
PF13304
PF13401
PF05621
ABC_tran
SMC_N
AAA_21
AAA_22
TniB
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
Bacterial TniB protein
3.50E-36
8.00E-13
1.60E-08
6.80E-06
8.80E-05
WP_015591987.1 149093 149963 + 289PF00005
PF13304
PF02463
PF13175
PF13555
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
1.90E-31
4.90E-13
2.00E-07
1.40E-06
1.20E-05
WP_041580205.1 149959 150757 + 265PF02361CbiQCobalt transport protein3.60E-58
WP_015591989.1 150770 151508 + 245PF01416PseudoU_synth_1tRNA pseudouridine synthase5.20E-43
WP_015591990.1 151698 152136 + 145PF00572Ribosomal_L13Ribosomal protein L134.90E-49
WP_015591991.1 152157 152550 + 130PF00380Ribosomal_S9Ribosomal protein S9/S169.90E-48
WP_083935033.1 152825 153116 + 96NO PFAM MATCH---
WP_015591993.1 153540 155490 + 649NO PFAM MATCH---
WP_015591994.1 155489 157430 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-85
WP_015591995.1 157454 159038 + 527PF00881NitroreductaseNitroreductase family8.00E-17
WP_015591996.1 159171 159615 + 147PF10730DUF2521Protein of unknown function (DUF2521)1.10E-62
WP_015591997.1 159729 160449 + 239PF01520Amidase_3N-acetylmuramoyl-L-alanine amidase4.80E-50
WP_015591998.1 160598 161657 + 352PF10609
PF01656
PF13614
PF00142
PF09140
ParA
CbiA
AAA_31
Fer4_NifH
MipZ
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
ATPase MipZ
1.40E-84
2.50E-13
3.20E-12
1.60E-07
3.20E-07
WP_015591999.1 162314 161723 - 196PF17898GerDSpore germination GerD central core domain4.40E-50
WP_041580207.1 162519 163149 + 209PF14089KbaAKinB-signalling pathway activation in sporulation1.10E-80
WP_015592001.1 163982 163229 - 250PF01522Polysacc_deac_1Polysaccharide deacetylase2.80E-24
WP_015592002.1 164114 164345 + 76NO PFAM MATCH---

Results for WP_015609024.1 [Streptomyces microflavus DSM 40593] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043972323.1 3080250 3080838 + 195PF13305
PF00440
TetR_C_33
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.20E-17
1.70E-10
WP_164711282.1 3080911 3081082 + 56NO PFAM MATCH---
WP_043972326.1 3081611 3081068 - 180PF07702UTRAUTRA domain1.20E-23
WP_015609019.1 3085222 3081688 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.90E-24
2.80E-21
2.20E-16
2.20E-15
WP_015609020.1 3085753 3086749 + 331PF00196
PF13412
GerE
HTH_24
Bacterial regulatory proteins, luxR family
Winged helix-turn-helix DNA-binding
3.50E-05
5.80E-04
WP_015609021.1 3087087 3086832 - 84NO PFAM MATCH---
WP_043974443.1 3088364 3087083 - 426PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
5.80E-21
2.00E-08
WP_015609023.1 3088745 3088922 + 58NO PFAM MATCH---
WP_015609024.1 3091009 3088999 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-81
WP_015609025.1 3091761 3091005 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
6.00E-29
1.10E-19
2.30E-04
WP_032757262.1 3092771 3091814 - 318PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
8.40E-29
6.70E-15
3.20E-05
7.90E-05
WP_015609027.1 3093929 3092819 - 369PF02163Peptidase_M50Peptidase family M501.80E-04
WP_015609028.1 3094975 3093925 - 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-94
WP_015609029.1 3097686 3094971 - 904PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.10E-47
WP_043972332.1 3099333 3097701 - 543PF00881NitroreductaseNitroreductase family5.60E-17
WP_015609031.1 3101360 3099386 - 657PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-80
WP_015609032.1 3103662 3101349 - 770NO PFAM MATCH---

Results for WP_015613007.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_015609032.1 [Streptomyces microflavus DSM 40593] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015609024.1 3091009 3088999 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-81
WP_015609025.1 3091761 3091005 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
6.00E-29
1.10E-19
2.30E-04
WP_032757262.1 3092771 3091814 - 318PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
8.40E-29
6.70E-15
3.20E-05
7.90E-05
WP_015609027.1 3093929 3092819 - 369PF02163Peptidase_M50Peptidase family M501.80E-04
WP_015609028.1 3094975 3093925 - 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-94
WP_015609029.1 3097686 3094971 - 904PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.10E-47
WP_043972332.1 3099333 3097701 - 543PF00881NitroreductaseNitroreductase family5.60E-17
WP_015609031.1 3101360 3099386 - 657PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-80
WP_015609032.1 3103662 3101349 - 770NO PFAM MATCH---
WP_043972335.1 3105584 3103667 - 638PF03704
PF00931
PF00486
PF13191
BTAD
NB-ARC
Trans_reg_C
AAA_16
Bacterial transcriptional activator domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
8.40E-36
2.80E-08
4.20E-08
7.90E-07
WP_015609034.1 3105881 3105599 - 93NO PFAM MATCH---
WP_015609035.1 3108822 3106236 - 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.90E-37
2.40E-21
WP_015609036.1 3109607 3108818 - 262PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
4.30E-32
2.50E-06
2.20E-05
5.30E-05
3.20E-04
WP_043974446.1 3110031 3110655 + 207PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.50E-22
WP_106960217.1 3110971 3112459 + 495PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
1.30E-50
3.70E-15
3.90E-11
WP_015609039.1 3113086 3112489 - 198PF08006DUF1700Protein of unknown function (DUF1700)4.30E-04
WP_015609040.1 3113457 3113082 - 124PF03551PadRTranscriptional regulator PadR-like family2.20E-25

Results for WP_006916766.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025709876.1 3997513 3998197 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.90E-74
WP_025709877.1 3999045 3998211 - 277PF11667DUF3267Putative zincin peptidase7.60E-04
WP_139849175.1 3999241 4000027 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.20E-06
7.80E-04
WP_086389274.1 4000046 4001282 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.90E-22
8.60E-04
WP_000332414.1 4001748 4001319 - 142NO PFAM MATCH---
WP_001110231.1 4001947 4003282 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.40E-64
2.30E-20
6.40E-17
1.70E-15
3.40E-10
WP_000996781.1 4003442 4003853 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.20E-52
WP_016122120.1 4005425 4003883 - 513PF00881NitroreductaseNitroreductase family1.90E-12
WP_006916766.1 4007390 4005440 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-84
WP_086389276.1 4009306 4007386 - 639NO PFAM MATCH---
WP_000569922.1 4010690 4009430 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000197161.1 4013691 4010823 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.20E-55
1.20E-36
WP_000428506.1 4014514 4014724 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_086411859.1 4014726 4015104 + 125NO PFAM MATCH---
WP_001178291.1 4015132 4015315 + 60PF13121DUF3976Domain of unknown function (DUF3976)8.70E-27
WP_001036583.1 4015447 4015810 + 120NO PFAM MATCH---
WP_001171895.1 4015920 4016079 + 52NO PFAM MATCH---

Results for WP_010846907.1 [Xenorhabdus nematophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010846915.1 45547 43201 - 781PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
9.70E-48
4.10E-16
1.80E-08
WP_010846914.1 46041 45750 - 96PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-29
2.40E-08
WP_010846913.1 47790 46116 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.60E-97
3.30E-11
2.80E-05
WP_010846912.1 48671 47984 - 228PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
9.50E-80
3.50E-07
3.00E-05
6.30E-05
1.20E-04
WP_038219052.1 50177 48890 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.70E-150
WP_013183920.1 51424 50335 - 362PF00266Aminotran_5Aminotransferase class-V1.80E-66
WP_038219051.1 51798 54858 + 1019PF00501
PF07993
PF00550
PF01370
PF01073
AMP-binding
NAD_binding_4
PP-binding
Epimerase
3Beta_HSD
AMP-binding enzyme
Male sterility protein
Phosphopantetheine attachment site
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
3.00E-74
1.30E-60
5.00E-13
1.60E-11
1.00E-09
WP_010846908.1 55958 54914 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
8.20E-58
8.40E-26
WP_010846907.1 56106 57867 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-81
1.20E-67
WP_013183918.1 58195 59053 + 285PF01226Form_Nir_transFormate/nitrite transporter9.30E-74
WP_041979652.1 59111 61394 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-204
4.60E-43
WP_010846904.1 61523 62264 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.70E-30
4.00E-19
6.60E-06
WP_010846903.1 62762 63578 + 271NO PFAM MATCH---
WP_230333005.1 64322 64012 - 102PF13586
PF01609
PF13359
DDE_Tnp_1_2
DDE_Tnp_1
DDE_Tnp_4
Transposase DDE domain
Transposase DDE domain
DDE superfamily endonuclease
2.60E-14
7.90E-10
1.90E-05

Results for WP_010798587.1 [Pseudomonas zeshuii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010798579.1 21132 20778 - 117NO PFAM MATCH---
WP_010798580.1 21657 25404 + 1248PF00384
PF01568
PF14710
Molybdopterin
Molydop_binding
Nitr_red_alph_N
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Respiratory nitrate reductase alpha N-terminal
6.40E-148
3.30E-21
4.30E-15
WP_010798581.1 25400 26933 + 510PF13247
PF14711
PF13237
PF12838
PF13187
Fer4_11
Nitr_red_bet_C
Fer4_10
Fer4_7
Fer4_9
4Fe-4S dicluster domain
Respiratory nitrate reductase beta C-terminal
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.20E-37
1.10E-26
1.90E-08
2.30E-08
5.30E-04
WP_010798582.1 26937 27645 + 235PF02613Nitrate_red_delNitrate reductase delta subunit4.70E-10
WP_010798583.1 27656 28361 + 234PF02665Nitrate_red_gamNitrate reductase gamma subunit2.30E-77
WP_010798584.1 28357 28915 + 185PF04273BLH_phosphataseBeta-lactamase hydrolase-like protein, phosphatase-like domain4.30E-06
WP_010798585.1 28925 29804 + 292PF00639
PF13616
PF13145
Rotamase
Rotamase_3
Rotamase_2
PPIC-type PPIASE domain
PPIC-type PPIASE domain
PPIC-type PPIASE domain
1.30E-18
1.80E-15
1.90E-10
WP_083603263.1 29863 31081 + 405PF07690
PF01306
MFS_1
LacY_symp
Major Facilitator Superfamily
LacY proton/sugar symporter
9.20E-41
4.00E-04
WP_010798587.1 33450 31245 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-74
2.00E-72
4.00E-08
WP_177325230.1 33875 35612 + 578PF00150CellulaseCellulase (glycosyl hydrolase family 5)4.60E-41
WP_256205735.1 35810 35933 + 40NO PFAM MATCH---
WP_010798589.1 36563 36812 + 82NO PFAM MATCH---
WP_010798590.1 36974 37490 + 171PF07883
PF02311
PF02041
PF05899
Cupin_2
AraC_binding
Auxin_BP
Cupin_3
Cupin domain
AraC-like ligand binding domain
Auxin binding protein
EutQ-like cupin domain
1.70E-19
2.10E-05
2.70E-05
1.30E-04
WP_010798592.1 37919 39110 + 396PF02518
PF00512
PF01590
PF13185
PF14501
HATPase_c
HisKA
GAF
GAF_2
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
GAF domain
GHKL domain
6.50E-18
9.50E-13
2.70E-07
1.20E-04
4.20E-04
WP_010798593.1 39204 39441 + 78NO PFAM MATCH---
WP_010798594.1 40100 39488 - 203PF13460
PF05368
PF03435
PF01370
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
9.40E-28
5.40E-11
4.30E-08
3.30E-05
WP_010798595.1 40211 40586 + 124PF01638
PF01022
HxlR
HTH_5
HxlR-like helix-turn-helix
Bacterial regulatory protein, arsR family
1.90E-25
1.40E-04

Results for WP_004588997.1 [Pseudoalteromonas sp. S981] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004588989.1 36948 37323 + 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
4.40E-35
5.50E-04
WP_004588990.1 37332 38544 + 403PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
8.20E-36
3.00E-17
WP_004588991.1 39001 38617 - 127PF01124MAPEGMAPEG family2.10E-20
WP_004588992.1 39255 40134 + 292PF00892EamAEamA-like transporter family1.60E-10
WP_004588993.1 40532 40214 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.40E-21
WP_004588994.1 42064 40531 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
1.60E-31
1.20E-04
WP_004588995.1 43001 42152 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily4.90E-08
WP_004588996.1 45345 43059 - 761PF01804Penicil_amidasePenicillin amidase5.40E-125
WP_004588997.1 45491 47252 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.60E-79
2.80E-57
WP_010554550.1 47366 50728 + 1120INFERRED GENE---
WP_004588998.1 50769 51396 + 208PF04337DUF480Protein of unknown function, DUF4802.10E-61
WP_004588999.1 51465 52302 + 278PF02540NAD_synthaseNAD synthase2.20E-64
WP_004589000.1 52419 53139 + 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
8.90E-28
3.30E-24
1.40E-08
8.70E-05
WP_004589001.1 53163 53718 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I2.40E-76
WP_002962340.1 53720 54076 + 118INFERRED GENE---
WP_024032092.1 54513 54078 - 144PF09335SNARE_assocSNARE associated Golgi protein4.40E-13
WP_004589005.1 54934 54568 - 121PF09685DUF4870Domain of unknown function (DUF4870)8.80E-39

Results for WP_004112139.1 [Rhizobium freirei PRF 81] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004112132.1 35138 33674 - 487PF00171
PF07368
Aldedh
DUF1487
Aldehyde dehydrogenase family
Protein of unknown function (DUF1487)
8.00E-146
2.30E-04
WP_004112133.1 35667 35310 - 118PF05899
PF07883
Cupin_3
Cupin_2
EutQ-like cupin domain
Cupin domain
8.70E-23
5.80E-06
WP_004112134.1 36613 35689 - 307PF02826
PF03446
2-Hacid_dh_C
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
1.20E-43
6.00E-05
WP_037150345.1 37766 36641 - 374PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
9.20E-34
1.90E-19
WP_004112136.1 38005 38905 + 299PF18014
PF13673
Acetyltransf_18
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.60E-14
6.30E-06
WP_157385315.1 39139 39535 + 131PF12844
PF01381
HTH_19
HTH_3
Helix-turn-helix domain
Helix-turn-helix
1.80E-04
8.10E-04
WP_004112137.1 39531 41340 + 602PF07719
PF14559
TPR_2
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
6.80E-06
2.50E-05
WP_004112138.1 41352 41571 + 72NO PFAM MATCH---
WP_004112139.1 41585 42758 + 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-62
WP_004112144.1 42754 43459 + 234PF07812TfuATfuA-like protein4.50E-42
WP_004112146.1 43565 43787 + 73NO PFAM MATCH---
WP_004112149.1 45052 44143 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.20E-36
2.50E-19
WP_004112157.1 45311 46118 + 268PF03746LamB_YcsFLamB/YcsF family2.10E-84
WP_004112159.1 46104 46347 + 80PF00364Biotin_lipoylBiotin-requiring enzyme2.90E-11
WP_004112162.1 46343 47729 + 461PF02786
PF00289
PF02785
PF07478
PF02222
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
D-ala D-ala ligase C-terminus
ATP-grasp domain
1.00E-70
4.80E-43
4.50E-38
1.50E-07
5.70E-06
WP_004112165.1 47728 48604 + 291PF02682CT_C_DCarboxyltransferase domain, subdomain C and D1.20E-41
WP_037150348.1 48593 49565 + 323PF02626CT_A_BCarboxyltransferase domain, subdomain A and B5.30E-85

Results for WP_004581151.1 [Marinobacter nanhaiticus D15-8W] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_051079849.1 2602622 2601401 - 406PF14031
PF01168
D-ser_dehydrat
Ala_racemase_N
Putative serine dehydratase domain
Alanine racemase, N-terminal domain
1.90E-14
2.00E-13
WP_154660753.1 2603554 2602669 - 294PF01418
PF01380
PF13580
HTH_6
SIS
SIS_2
Helix-turn-helix domain, rpiR family
SIS domain
SIS domain
5.60E-18
2.60E-13
2.40E-08
WP_004581145.1 2603990 2603603 - 128PF01042Ribonuc_L-PSPEndoribonuclease L-PSP4.90E-29
WP_004581146.1 2604165 2604687 + 173PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component1.60E-27
WP_004581147.1 2604683 2605961 + 425PF06808
PF03600
DctM
CitMHS
Tripartite ATP-independent periplasmic transporter, DctM component
Citrate transporter
6.90E-109
4.70E-05
WP_004581148.1 2605997 2607056 + 352PF03480DctPBacterial extracellular solute-binding protein, family 71.60E-75
WP_004581149.1 2607109 2608573 + 487PF07364
PF07171
DUF1485
MlrC_C
Metallopeptidase family M81
MlrC C-terminus
1.50E-81
1.00E-48
WP_004581150.1 2608640 2609603 + 320PF00294PfkBpfkB family carbohydrate kinase5.90E-36
WP_004581151.1 2609813 2612021 + 735PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.60E-75
6.50E-73
2.70E-09
WP_004581152.1 2612144 2612762 + 205PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.90E-20
5.40E-19
3.70E-17
1.80E-16
2.60E-12
WP_004581153.1 2613011 2615540 + 842PF00563
PF00990
PF08447
PF08448
PF00989
EAL
GGDEF
PAS_3
PAS_4
PAS
EAL domain
Diguanylate cyclase, GGDEF domain
PAS fold
PAS fold
PAS fold
1.30E-64
3.40E-50
2.70E-15
2.30E-12
1.40E-07
WP_004581154.1 2616643 2615656 - 328PF08240
PF00107
PF13602
ADH_N
ADH_zinc_N
ADH_zinc_N_2
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
4.40E-32
4.50E-05
6.30E-04
WP_004581155.1 2617983 2616954 - 342PF01594AI-2E_transportAI-2E family transporter5.90E-42
WP_004581156.1 2619145 2618113 - 343PF13531
PF13416
PF01547
PF13343
SBP_bac_11
SBP_bac_8
SBP_bac_1
SBP_bac_6
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
3.10E-17
2.20E-15
6.30E-09
4.00E-08
WP_004581157.1 2620542 2619141 - 466PF08521
PF02518
PF00512
2CSK_N
HATPase_c
HisKA
Two-component sensor kinase N-terminal
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
2.40E-28
5.60E-19
2.70E-11
WP_004581158.1 2621207 2620538 - 222PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.10E-26
8.00E-16
WP_004581159.1 2621362 2622349 + 328PF03401TctCTripartite tricarboxylate transporter family receptor2.50E-22

Results for WP_004589940.1 [Methanocaldococcus villosus KIN24-T80] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004589932.1 4411 4927 + 171PF00571CBSCBS domain1.40E-22
WP_004589933.1 4944 5259 + 104PF01981PTH2Peptidyl-tRNA hydrolase PTH21.80E-37
WP_026152834.1 5292 6321 + 342PF00148Oxidored_nitroNitrogenase component 1 type Oxidoreductase1.70E-15
WP_026152833.1 7722 6312 - 469PF02386TrkHCation transport protein9.20E-53
WP_040682702.1 8550 7725 - 274PF02355
PF07549
SecD_SecF
Sec_GG
Protein export membrane protein
SecD/SecF GG Motif
2.30E-38
5.70E-04
WP_236610556.1 8614 9850 + 411PF13412
PF12802
PF01047
PF13545
PF05010
HTH_24
MarR_2
MarR
HTH_Crp_2
TACC_C
Winged helix-turn-helix DNA-binding
MarR family
MarR family
Crp-like helix-turn-helix domain
Transforming acidic coiled-coil-containing protein (TACC), C-terminal
3.40E-08
2.50E-06
3.50E-06
8.40E-05
2.00E-04
WP_004589938.1 9865 10996 + 376PF04101
PF13528
PF00201
Glyco_tran_28_C
Glyco_trans_1_3
UDPGT
Glycosyltransferase family 28 C-terminal domain
Glycosyl transferase family 1
UDP-glucoronosyl and UDP-glucosyl transferase
3.20E-25
1.40E-18
5.30E-08
WP_004589939.1 10998 12261 + 420PF08489
PF01336
DUF1743
tRNA_anti-codon
Domain of unknown function (DUF1743)
OB-fold nucleic acid binding domain
1.00E-41
4.40E-08
WP_004589940.1 12257 13391 + 377PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-73
WP_017980913.1 14278 13384 - 297PF04055Radical_SAMRadical SAM superfamily1.90E-20
WP_004589942.1 14364 15300 + 311PF01866Diphthamide_synPutative diphthamide synthesis protein6.10E-54
WP_004589943.1 15302 17129 + 608PF08915
PF03129
PF00587
tRNA-Thr_ED
HGTP_anticodon
tRNA-synt_2b
Archaea-specific editing domain of threonyl-tRNA synthetase
Anticodon binding domain
tRNA synthetase class II core domain (G, H, P, S and T)
4.20E-52
1.20E-23
1.80E-15
WP_012980083.1 17141 20116 + 991INFERRED GENE---
WP_004589944.1 20977 20119 - 285PF07719
PF00515
PF13181
PF13428
PF14559
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.60E-31
2.50E-29
4.30E-26
2.40E-25
9.30E-20
WP_004589945.1 21881 21020 - 286PF13428
PF07719
PF00515
PF13414
PF13431
TPR_14
TPR_2
TPR_1
TPR_11
TPR_17
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
2.00E-23
5.00E-23
7.70E-21
9.10E-21
4.10E-19
WP_004589946.1 21976 22384 + 135PF01402
PF17723
PF08753
RHH_1
RHH_8
NikR_C
Ribbon-helix-helix protein, copG family
Ribbon-Helix-Helix transcriptional regulator family
NikR C terminal nickel binding domain
2.20E-10
8.90E-05
2.50E-04
WP_201763958.1 22448 23207 + 252PF01955CbiZAdenosylcobinamide amidohydrolase3.40E-58

Results for WP_005962416.1 [Schaalia cardiffensis F0333] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005962424.1 169637 171206 + 522PF06826
PF02080
Asp-Al_Ex
TrkA_C
Predicted Permease Membrane Region
TrkA-C domain
5.80E-55
3.60E-14
WP_005962423.1 172030 172570 + 179PF00293NUDIXNUDIX domain1.20E-11
WP_040313560.1 174186 172887 - 432PF02127
PF01546
PF05343
Peptidase_M18
Peptidase_M20
Peptidase_M42
Aminopeptidase I zinc metalloprotease (M18)
Peptidase family M20/M25/M40
M42 glutamyl aminopeptidase
2.80E-110
4.60E-06
1.20E-04
WP_005962421.1 176015 174281 - 577PF00005
PF00664
PF13304
PF02463
PF13191
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.40E-30
7.90E-16
1.10E-04
5.50E-04
8.10E-04
WP_005962420.1 177778 176011 - 588PF00005
PF00664
PF02463
ABC_tran
ABC_membrane
SMC_N
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
3.90E-28
5.30E-22
5.50E-07
WP_040313559.1 178842 177801 - 346PF01497Peripla_BP_2Periplasmic binding protein1.30E-21
WP_005962418.1 179634 178854 - 259PF00005
PF13304
PF02463
PF13191
PF13671
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_33
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
2.40E-31
1.00E-11
2.30E-06
2.50E-05
3.70E-05
WP_005962417.1 180743 179630 - 370PF01032FecCDFecCD transport family9.30E-84
WP_005962416.1 182850 180735 - 704PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-56
WP_005962414.1 183756 183306 - 149PF00583
PF13673
PF13508
PF14542
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_CG
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
FR47-like protein
7.30E-15
1.20E-08
2.00E-08
2.30E-05
1.00E-04
WP_005962413.1 185100 183927 - 390PF05958
PF13649
PF09445
PF05175
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
MTS
tRNA (Uracil-5-)-methyltransferase
Methyltransferase domain
RNA cap guanine-N2 methyltransferase
Methyltransferase small domain
4.70E-17
2.20E-05
7.20E-05
1.90E-04
WP_005962411.1 187731 185412 - 772PF01120
PF16841
Alpha_L_fucos
CBM60
Alpha-L-fucosidase
Ca-dependent carbohydrate-binding module xylan-binding
3.10E-56
4.50E-04
WP_006680761.1 188200 188494 + 98INFERRED GENE---
WP_005962408.1 188586 189564 + 325PF02424ApbEApbE family7.10E-41
WP_009232025.1 189533 190140 + 202INFERRED GENE---
WP_005962404.1 190384 194356 + 1323PF11852
PF18957
PF17967
PF02922
PF00128
Pullul_strch_C
RibLong
Pullulanase_N2
CBM_48
Alpha-amylase
Alpha-1,6-glucosidases, pullulanase-type, C-terminal
Long Rib domain
Pullulanase N2 domain
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, catalytic domain
3.80E-56
1.30E-14
2.40E-13
1.60E-05
3.10E-04
WP_040313558.1 194905 194392 - 170PF04138GtrAGtrA-like protein1.40E-07

Results for WP_004251582.1 [Thauera sp. 63] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004251557.1 209771 210248 + 158PF06676DUF1178Protein of unknown function (DUF1178)1.60E-49
WP_004251560.1 211442 210263 - 392PF01663
PF01676
PF08665
Phosphodiest
Metalloenzyme
PglZ
Type I phosphodiesterase / nucleotide pyrophosphatase
Metalloenzyme superfamily
PglZ domain
4.00E-19
8.50E-05
5.90E-04
WP_004251563.1 213479 211778 - 566PF02652Lactate_permL-lactate permease2.60E-103
WP_004251566.1 213927 213522 - 134PF03928HbpS-likeHaem degrading protein HbpS-like1.10E-32
WP_004251568.1 215211 213993 - 405PF02754
PF12838
PF13183
PF13534
PF13237
CCG
Fer4_7
Fer4_8
Fer4_17
Fer4_10
Cysteine-rich domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
6.30E-29
2.60E-12
1.30E-11
3.80E-10
4.50E-06
WP_004251571.1 216322 215254 - 355PF01565
PF02913
FAD_binding_4
FAD-oxidase_C
FAD binding domain
FAD linked oxidases, C-terminal domain
1.80E-25
7.50E-04
WP_004251576.1 217821 216321 - 499PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
3.00E-63
4.90E-37
WP_004251579.1 218057 218846 + 262PF07729
PF00392
PF07840
PF01022
FCD
GntR
FadR_C
HTH_5
FCD domain
Bacterial regulatory proteins, gntR family
FadR C-terminal domain
Bacterial regulatory protein, arsR family
1.00E-24
6.40E-16
6.80E-05
7.20E-04
WP_004251582.1 221108 218912 - 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.20E-73
5.40E-71
6.80E-08
WP_004251586.1 221985 221265 - 239PF00005
PF02463
PF13304
PF13191
PF13555
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
P-loop containing region of AAA domain
7.10E-31
1.00E-07
3.80E-07
1.30E-05
2.40E-05
WP_004251589.1 223192 221986 - 401PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.40E-18
3.20E-13
WP_004251593.1 224340 223188 - 383PF16576
PF13437
PF13533
PF00364
PF01551
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
Peptidase family M23
1.20E-14
4.40E-11
4.80E-07
7.10E-05
5.10E-04
WP_004251597.1 224945 224327 - 205PF00440
PF17932
PF13977
PF14246
PF17918
TetR_N
TetR_C_24
TetR_C_6
TetR_C_7
TetR_C_15
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
BetI-type transcriptional repressor, C-terminal
AefR-like transcriptional repressor, C-terminal domain
Tetracyclin repressor-like, C-terminal domain
8.50E-09
8.00E-08
2.80E-05
7.70E-05
1.40E-04
WP_004251600.1 225625 225139 - 161PF02082
PF12802
PF09339
PF01978
Rrf2
MarR_2
HTH_IclR
TrmB
Iron-dependent Transcriptional regulator
MarR family
IclR helix-turn-helix domain
Sugar-specific transcriptional regulator TrmB
9.00E-35
9.20E-08
4.90E-05
4.50E-04
WP_082794245.1 225746 226091 + 114PF01814HemerythrinHemerythrin HHE cation binding domain1.50E-07
WP_004251605.1 227237 226133 - 367PF00015
PF13682
MCPsignal
CZB
Methyl-accepting chemotaxis protein (MCP) signalling domain
Chemoreceptor zinc-binding domain
9.50E-36
7.20E-12
WP_232435044.1 228057 227487 - 189NO PFAM MATCH---

Results for WP_004383721.1 [Thauera phenylacetica B4P] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_157302445.1 109 652 + 180NO PFAM MATCH---
WP_004383721.1 981 3186 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.80E-75
2.50E-73
3.20E-08

Results for WP_002945317.1 [Thauera sp. WB-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270068640.1 4014702 4012434 - 755PF00580
PF13361
PF13245
PF13604
PF13538
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
UvrD/REP helicase N-terminal domain
UvrD-like helicase C-terminal domain
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
1.50E-55
4.30E-42
8.20E-30
3.40E-11
3.10E-09
WP_002931218.1 4016493 4014759 - 577PF00990
PF07695
PF07696
GGDEF
7TMR-DISM_7TM
7TMR-DISMED2
Diguanylate cyclase, GGDEF domain
7TM diverse intracellular signalling
7TMR-DISM extracellular 2
4.10E-42
1.50E-29
1.40E-16
WP_270068641.1 4016790 4017585 + 264PF00656Peptidase_C14Caspase domain8.00E-36
WP_270068642.1 4018159 4017577 - 193PF12697
PF00561
PF12146
PF00975
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Thioesterase
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Thioesterase domain
1.20E-07
2.40E-07
1.40E-06
3.00E-04
WP_002931221.1 4019511 4018245 - 421PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component1.70E-109
WP_002931222.1 4020035 4019507 - 175PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component6.80E-29
WP_002931223.1 4021052 4020038 - 337PF03480DctPBacterial extracellular solute-binding protein, family 77.20E-84
WP_002931224.1 4022066 4021166 - 299PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
3.70E-30
3.20E-07
WP_002945317.1 4022287 4024486 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.00E-74
7.60E-71
8.00E-08
WP_002945319.1 4024482 4025244 + 253PF13531
PF01547
PF03466
SBP_bac_11
SBP_bac_1
LysR_substrate
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
LysR substrate binding domain
9.90E-45
5.10E-05
1.50E-04
WP_002945322.1 4025262 4025952 + 229PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component8.80E-17
WP_002945325.1 4026022 4027156 + 377PF00005
PF03459
PF13304
ABC_tran
TOBE
AAA_21
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
4.00E-26
7.60E-15
1.00E-06
WP_270068643.1 4029026 4027163 - 620PF13604
PF13245
PF13538
PF13086
PF05127
AAA_30
AAA_19
UvrD_C_2
AAA_11
Helicase_RecD
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Helicase
1.20E-34
9.80E-27
9.50E-15
1.60E-10
8.70E-10
WP_270068644.1 4032907 4029022 - 1294PF00580
PF13245
PF13361
PF13538
PF12705
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
UvrD/REP helicase N-terminal domain
AAA domain
UvrD-like helicase C-terminal domain
UvrD-like helicase C-terminal domain
PD-(D/E)XK nuclease superfamily
1.80E-54
1.50E-16
2.70E-15
3.60E-08
6.20E-07
WP_002933369.1 4033945 4034962 + 338PF13531
PF01547
PF13416
PF13343
SBP_bac_11
SBP_bac_1
SBP_bac_8
SBP_bac_6
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
7.00E-43
1.50E-15
1.50E-09
1.60E-05
WP_002933373.1 4035057 4035516 + 152PF13380CoA_binding_2CoA binding domain4.90E-43
WP_002933376.1 4035539 4036820 + 426PF01053
PF01041
PF00155
PF01212
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys/Met metabolism PLP-dependent enzyme
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
2.40E-139
4.40E-13
4.40E-06
1.70E-04

Results for WP_004313316.1 [Thauera aminoaromatica S2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004313301.1 1436 2675 + 412PF03594
PF16983
BenE
MFS_MOT1
Benzoate membrane transport protein
Molybdate transporter of MFS superfamily
4.70E-70
8.00E-06
WP_004313302.1 2754 4173 + 472PF01554MatEMatE1.30E-58
WP_004313303.1 4310 4958 + 215PF01243
PF10590
Putative_PNPOx
PNP_phzG_C
Pyridoxamine 5'-phosphate oxidase
Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
1.30E-26
5.00E-20
WP_004313305.1 5928 5268 - 219PF02589LUD_domLUD domain1.40E-17
WP_004313307.1 7334 5924 - 469PF02589
PF13183
PF11870
PF13237
PF13534
LUD_dom
Fer4_8
LutB_C
Fer4_10
Fer4_17
LUD domain
4Fe-4S dicluster domain
Lactate utilisation protein B, C-terminal
4Fe-4S dicluster domain
4Fe-4S dicluster domain
8.60E-49
4.20E-11
4.30E-11
2.60E-07
2.70E-06
WP_004313309.1 8135 7337 - 265PF02754CCGCysteine-rich domain5.30E-25
WP_004313311.1 8423 9335 + 303PF04216
PF05129
FdhE
Elf1
Protein involved in formate dehydrogenase formation
Transcription elongation factor Elf1 like
9.80E-92
5.50E-04
WP_004313313.1 10886 9848 - 345PF16113
PF00378
ECH_2
ECH_1
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
7.80E-117
1.20E-31
WP_004313316.1 13093 10888 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-75
8.30E-74
8.50E-08
WP_004313317.1 13749 13233 - 171NO PFAM MATCH---
WP_144312179.1 13991 13745 - 81NO PFAM MATCH---
WP_004313320.1 15385 14329 - 351PF01661MacroMacro domain1.10E-20
WP_004313322.1 16072 15397 - 224PF14487DarTssDNA thymidine ADP-ribosyltransferase, DarT2.40E-64
WP_004313324.1 17065 16075 - 329PF18899
PF01939
DUF5655
NucS
Domain of unknown function (DUF5655)
Endonuclease NucS
3.40E-12
2.60E-04
WP_245537168.1 17364 17061 - 100NO PFAM MATCH---

Results for WP_004336201.1 [Thauera linaloolentis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004336212.1 35451 35955 + 167PF01327Pep_deformylasePolypeptide deformylase1.10E-51
WP_004336211.1 35951 36905 + 317PF00551
PF02911
Formyl_trans_N
Formyl_trans_C
Formyl transferase
Formyl transferase, C-terminal domain
2.50E-43
1.50E-19
WP_004336210.1 36964 37810 + 281PF01435
PF05569
Peptidase_M48
Peptidase_M56
Peptidase family M48
BlaR1 peptidase M56
4.70E-39
4.80E-04
WP_004336209.1 38023 38524 + 166PF08281
PF04542
PF04545
PF07638
PF00196
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
ECF sigma factor
Bacterial regulatory proteins, luxR family
3.50E-15
1.10E-14
2.30E-10
1.30E-06
3.90E-04
WP_038001183.1 38626 39595 + 322PF04773
PF16220
FecR
DUF4880
FecR protein
Domain of unknown function (DUF4880)
1.00E-19
2.80E-15
WP_004336207.1 39788 42260 + 823PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
4.60E-43
1.00E-12
6.10E-10
WP_004336205.1 43024 42592 - 143NO PFAM MATCH---
WP_004336203.1 43782 43023 - 252PF08241
PF13649
PF13847
PF08242
PF13489
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.30E-16
2.30E-12
1.00E-05
1.50E-05
3.00E-05
WP_004336201.1 44011 46216 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.90E-72
6.50E-72
1.10E-07
WP_004336200.1 49574 46238 - 1111PF12794
PF00924
PF12795
MscS_TM
MS_channel
MscS_porin
Mechanosensitive ion channel inner membrane domain 1
Mechanosensitive ion channel
Mechanosensitive ion channel porin domain
1.40E-95
2.60E-55
4.20E-36
WP_004336198.1 50562 49704 - 285PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.40E-37
3.60E-18
WP_004336197.1 50664 51864 + 399PF06779
PF07690
MFS_4
MFS_1
Uncharacterised MFS-type transporter YbfB
Major Facilitator Superfamily
2.10E-74
2.10E-23
WP_004336195.1 52130 54368 + 745PF03971IDHMonomeric isocitrate dehydrogenase0.00E+00
WP_004336193.1 54572 55031 + 152PF01814HemerythrinHemerythrin HHE cation binding domain6.10E-13
WP_004336190.1 55432 55045 - 128NO PFAM MATCH---
WP_004336189.1 57077 55433 - 547PF01676
PF06415
Metalloenzyme
iPGM_N
Metalloenzyme superfamily
BPG-independent PGAM N-terminus (iPGM_N)
1.30E-72
6.40E-64
WP_028792378.1 57682 57220 - 153PF01322Cytochrom_C_2Cytochrome C'7.30E-30

Results for WP_004649082.1 [Acinetobacter bohemicus ANC 3994] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004649073.1 1097728 1096942 - 261PF13561
PF00106
PF08659
PF13649
adh_short_C2
adh_short
KR
Methyltransf_25
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
Methyltransferase domain
2.20E-60
1.20E-58
1.40E-12
9.80E-04
WP_004649074.1 1098904 1097845 - 352PF00107
PF08240
PF16912
PF13602
ADH_zinc_N
ADH_N
Glu_dehyd_C
ADH_zinc_N_2
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Glucose dehydrogenase C-terminus
Zinc-binding dehydrogenase
3.50E-26
7.30E-23
7.40E-09
4.10E-04
WP_004649075.1 1100452 1099051 - 466PF07992
PF02852
PF00070
PF13738
PF01134
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Glucose inhibited division protein A
1.90E-64
8.60E-36
3.70E-21
2.60E-19
1.00E-08
WP_004649076.1 1102016 1100462 - 517PF00198
PF02817
PF00364
2-oxoacid_dh
E3_binding
Biotin_lipoyl
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
e3 binding domain
Biotin-requiring enzyme
2.30E-81
1.30E-24
9.30E-18
WP_004649077.1 1103037 1102017 - 339PF02779
PF02780
PF17147
Transket_pyr
Transketolase_C
PFOR_II
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
Pyruvate:ferredoxin oxidoreductase core domain II
1.30E-55
2.10E-39
2.40E-04
WP_004649079.1 1104015 1103052 - 320PF00676
PF02775
E1_dh
TPP_enzyme_C
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
5.60E-83
1.30E-06
WP_004649080.1 1104377 1105361 + 327PF04055
PF16881
Radical_SAM
LIAS_N
Radical SAM superfamily
N-terminal domain of lipoyl synthase of Radical_SAM family
7.00E-14
6.30E-07
WP_004649081.1 1105600 1106692 + 363NO PFAM MATCH---
WP_004649082.1 1109039 1106834 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-74
4.00E-72
1.10E-08
WP_004649083.1 1109557 1110739 + 393PF14099Polysacc_lyasePolysaccharide lyase1.00E-19
WP_004649084.1 1111700 1110896 - 267PF136224HBT_3Thioesterase-like superfamily1.10E-20
WP_004649085.1 1113604 1111912 - 563PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.70E-110
7.40E-17
WP_004649086.1 1114352 1113725 - 208PF00440
PF17932
TetR_N
TetR_C_24
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.10E-15
6.40E-05
WP_004649087.1 1114499 1115672 + 390PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
6.80E-38
1.10E-36
2.50E-26
2.00E-13
WP_004649088.1 1115703 1117305 + 533PF01039Carboxyl_transCarboxyl transferase domain3.60E-151
WP_004649089.1 1117318 1118113 + 264PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
3.20E-49
1.20E-30
WP_004649091.1 1118132 1120124 + 663PF02786
PF00289
PF02785
PF00364
PF13533
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
Biotin-lipoyl like
2.50E-76
2.90E-45
1.40E-36
2.00E-15
6.00E-12

Results for WP_004662184.1 [Acinetobacter modestus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004662168.1 50465 50879 + 137PF13411
PF00376
PF09278
MerR_1
MerR
MerR-DNA-bind
MerR HTH family regulatory protein
MerR family regulatory protein
MerR, DNA binding
1.70E-18
1.10E-14
2.10E-11
WP_004662170.1 51012 51921 + 302PF12146
PF00561
PF02129
PF12697
PF05448
Hydrolase_4
Abhydrolase_1
Peptidase_S15
Abhydrolase_6
AXE1
Serine aminopeptidase, S33
alpha/beta hydrolase fold
X-Pro dipeptidyl-peptidase (S15 family)
Alpha/beta hydrolase family
Acetyl xylan esterase (AXE1)
3.30E-16
1.00E-12
2.90E-11
9.30E-10
7.10E-09
WP_004662172.1 51934 52768 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.80E-46
3.20E-37
2.20E-11
WP_034601388.1 53774 52775 - 332PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.20E-28
1.20E-17
1.40E-07
WP_004662176.1 54002 54809 + 268PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
1.40E-10
5.70E-05
WP_004662178.1 54991 56044 + 350PF06314ADCAcetoacetate decarboxylase (ADC)1.70E-07
WP_004662180.1 57377 56309 - 355PF03435
PF13460
Sacchrp_dh_NADP
NAD_binding_10
Saccharopine dehydrogenase NADP binding domain
NAD(P)H-binding
1.20E-12
1.90E-07
WP_004662182.1 58628 57389 - 412PF00724
PF00977
PF01207
PF02581
PF01168
Oxidored_FMN
His_biosynth
Dus
TMP-TENI
Ala_racemase_N
NADH:flavin oxidoreductase / NADH oxidase family
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Thiamine monophosphate synthase
Alanine racemase, N-terminal domain
6.80E-58
2.50E-06
7.20E-05
4.00E-04
5.80E-04
WP_004662184.1 61116 58911 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.50E-76
1.50E-72
1.30E-08
WP_004662186.1 62502 61335 - 388NO PFAM MATCH---
WP_227554452.1 63794 62501 - 430PF02321OEPOuter membrane efflux protein2.10E-44
WP_004662190.1 65416 63829 - 528PF03321GH3GH3 auxin-responsive promoter1.90E-75
WP_171062441.1 66201 65412 - 262NO PFAM MATCH---
WP_004662194.1 67936 66388 - 515PF07690MFS_1Major Facilitator Superfamily2.90E-42
WP_004662196.1 69023 67961 - 353PF13437
PF16576
PF13533
PF00529
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
Biotin-requiring enzyme
1.20E-20
5.50E-17
2.40E-14
1.60E-09
6.10E-04
WP_004662198.1 69729 70584 + 284PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
2.90E-30
3.00E-10
WP_004662199.1 71673 70638 - 344PF02558
PF08546
PF01210
PF03807
ApbA
ApbA_C
NAD_Gly3P_dh_N
F420_oxidored
Ketopantoate reductase PanE/ApbA
Ketopantoate reductase PanE/ApbA C terminal
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NADP oxidoreductase coenzyme F420-dependent
1.20E-33
7.90E-22
2.90E-07
1.20E-06

Results for WP_004671202.1 [Acinetobacter sp. CIP-A165] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004639188.1 1056843 1056717 - 41NO PFAM MATCH---
WP_004671187.1 1061058 1057452 - 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
2.50E-88
4.40E-65
7.30E-50
1.30E-45
1.70E-32
WP_004671189.1 1061715 1061061 - 217PF09347DUF1989Domain of unknown function (DUF1989)4.30E-62
WP_228127771.1 1062476 1061732 - 247PF09347DUF1989Domain of unknown function (DUF1989)6.10E-43
WP_004671193.1 1063221 1062741 - 159PF01037
PF13412
PF13404
PF08279
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
HTH domain
8.00E-21
3.20E-18
2.40E-17
1.20E-04
WP_004671195.1 1063351 1063990 + 212PF01810LysELysE type translocator7.40E-16
WP_004671197.1 1064896 1064065 - 276PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.40E-48
2.30E-36
2.10E-13
WP_004671199.1 1065985 1064911 - 357PF04909Amidohydro_2Amidohydrolase8.50E-20
WP_004671202.1 1068601 1066399 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.20E-75
2.80E-74
1.70E-08
WP_004671204.1 1070076 1068903 - 390NO PFAM MATCH---
WP_034595541.1 1071416 1070072 - 447PF02321OEPOuter membrane efflux protein1.50E-46
WP_004671208.1 1072999 1071412 - 528PF03321GH3GH3 auxin-responsive promoter4.40E-75
WP_004671210.1 1073817 1072995 - 273NO PFAM MATCH---
WP_004671212.1 1075511 1073963 - 515PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
4.60E-41
4.40E-05
WP_004671214.1 1076603 1075535 - 355PF13437
PF16576
PF13533
PF00529
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
Biotin-requiring enzyme
5.40E-19
6.90E-16
1.80E-13
4.70E-08
2.00E-04
WP_004671216.1 1077280 1078156 + 291PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
4.00E-30
2.00E-09
WP_004671217.1 1079153 1078277 - 291PF01965DJ-1_PfpIDJ-1/PfpI family1.50E-08

Results for WP_004646975.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004646984.1 2969987 2970905 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.90E-36
1.50E-13
WP_004646983.1 2971406 2973572 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
8.80E-26
1.60E-11
WP_004646981.1 2974245 2973636 - 202PF01914MarCMarC family integral membrane protein9.60E-14
WP_004646980.1 2976310 2974273 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.30E-175
WP_004646979.1 2976580 2977159 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
7.20E-29
1.30E-11
WP_004646978.1 2977180 2978656 + 491PF00171AldedhAldehyde dehydrogenase family7.80E-175
WP_004646977.1 2978667 2980323 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
5.30E-96
1.70E-41
7.70E-04
WP_004646976.1 2980452 2981223 + 256NO PFAM MATCH---
WP_004646975.1 2981557 2983759 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.30E-75
3.40E-73
8.80E-09
WP_004646974.1 2985731 2984018 - 570PF05187
PF00890
PF13450
PF01946
PF01266
ETF_QO
FAD_binding_2
NAD_binding_8
Thi4
DAO
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
NAD(P)-binding Rossmann-like domain
Thi4 family
FAD dependent oxidoreductase
6.80E-50
3.60E-07
2.70E-06
6.70E-06
8.90E-06
WP_004280319.1 2986795 2985958 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_004280318.1 2987298 2988453 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
1.60E-31
5.00E-29
1.20E-25
WP_004646973.1 2988484 2989684 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004646972.1 2989938 2991219 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_004646971.1 2991259 2991931 + 223PF01144CoA_transCoenzyme A transferase1.50E-65
WP_004646970.1 2991930 2992590 + 219PF01144CoA_transCoenzyme A transferase3.00E-31
WP_016806740.1 2992796 2995376 + 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
3.10E-74
3.20E-39
2.00E-31
3.60E-24
8.10E-18

Results for WP_004681769.1 [Acinetobacter parvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 37344 36834 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004681776.1 40017 37392 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
7.20E-73
4.40E-66
3.60E-28
1.40E-12
3.60E-04
WP_004681775.1 40504 40153 - 116PF13511DUF4124Domain of unknown function (DUF4124)5.50E-11
WP_004681773.1 41011 42739 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.60E-58
8.10E-49
1.90E-44
WP_004678407.1 42735 43227 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 43352 44369 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004681772.1 45060 47124 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
2.80E-73
2.10E-41
4.00E-38
WP_010589466.1 47237 48155 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-34
6.40E-14
WP_004681769.1 48380 50579 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
1.20E-71
3.50E-08

Results for WP_004678402.1 [Acinetobacter parvus NIPH 1103] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004804437.1 114140 114393 + 84INFERRED GENE---
WP_004678390.1 117589 114469 - 1039PF11867
PF18766
PF04313
PF04851
DUF3387
SWI2_SNF2
HSDR_N
ResIII
Domain of unknown function (DUF3387)
SWI2/SNF2 ATPase
Type I restriction enzyme R protein N terminus (HSDR_N)
Type III restriction enzyme, res subunit
1.50E-117
4.10E-84
7.70E-42
7.50E-17
WP_004678391.1 118593 117585 - 335PF02661FicFic/DOC family1.30E-22
WP_004678394.1 119984 118595 - 462PF01420Methylase_SType I restriction modification DNA specificity domain1.00E-16
WP_228129081.1 120355 119980 - 124PF13412
PF01047
PF02082
PF12802
PF01726
HTH_24
MarR
Rrf2
MarR_2
LexA_DNA_bind
Winged helix-turn-helix DNA-binding
MarR family
Iron-dependent Transcriptional regulator
MarR family
LexA DNA binding domain
6.30E-11
9.00E-08
3.90E-06
4.60E-06
6.90E-06
WP_004678397.1 121082 120347 - 244PF17761
PF06250
DUF1016_N
YhcG_C
DUF1016 N-terminal domain
YhcG PDDEXK nuclease domain
5.80E-45
1.60E-29
WP_004678400.1 122802 121071 - 576PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.10E-113
2.20E-22
WP_004739665.1 122881 122968 + 29INFERRED GENE---
WP_004678402.1 125268 123069 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
3.40E-72
3.30E-08
WP_035328484.1 126412 125494 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.20E-35
6.40E-14
WP_004678405.1 128589 126525 - 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
1.20E-73
6.80E-41
7.10E-39
WP_004659026.1 130264 129247 - 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004678407.1 130866 130374 - 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004678409.1 132590 130862 - 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
2.00E-58
2.10E-48
3.30E-46
WP_004678410.1 133097 133442 + 114PF13511DUF4124Domain of unknown function (DUF4124)6.00E-12
WP_004678412.1 133591 136231 + 879PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
4.70E-70
8.70E-66
3.20E-28
9.20E-13
3.70E-04
WP_004678414.1 136279 136789 + 169PF04390LptELipopolysaccharide-assembly5.20E-04

Results for WP_004702839.1 [Acinetobacter seifertii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004702823.1 1900565 1901864 + 432PF07690
PF06779
PF12832
PF11700
MFS_1
MFS_4
MFS_1_like
ATG22
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Vacuole effluxer Atg22 like
1.90E-49
4.00E-07
2.40E-05
6.90E-04
WP_002163154.1 1901913 1902813 + 299PF05681FumeraseFumarate hydratase (Fumerase)3.50E-74
WP_004702828.1 1902809 1903418 + 202PF05683Fumerase_CFumarase C-terminus1.60E-40
WP_004702830.1 1904477 1903463 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.00E-36
9.20E-14
4.50E-05
WP_004702832.1 1904610 1906098 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
8.10E-21
6.40E-17
1.60E-11
2.80E-11
3.00E-09
WP_004702834.1 1906142 1906997 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.60E-50
3.70E-36
1.70E-11
WP_004702836.1 1907069 1907963 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
8.00E-54
5.30E-11
2.50E-08
2.80E-06
1.60E-05
WP_004702838.1 1907990 1909661 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.70E-17
9.90E-10
2.80E-05
5.30E-05
WP_004702839.1 1911926 1909727 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-73
6.30E-73
1.70E-08
WP_004702840.1 1913459 1912178 - 426PF03573OprDouter membrane porin, OprD family1.90E-105
WP_004702841.1 1914837 1913490 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
2.10E-46
6.50E-23
3.60E-09
WP_004702842.1 1915353 1916430 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
5.70E-54
9.10E-19
1.20E-05
WP_004702843.1 1916442 1917387 + 314PF00111
PF00175
PF08030
Fer2
NAD_binding_1
NAD_binding_6
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
Ferric reductase NAD binding domain
1.20E-12
1.60E-05
2.80E-04
WP_077162611.1 1918121 1917428 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
8.10E-11
WP_004702845.1 1918700 1918244 - 151PF01047
PF12802
PF13412
PF01978
MarR
MarR_2
HTH_24
TrmB
MarR family
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
1.50E-09
1.20E-08
1.00E-04
9.50E-04
WP_004702846.1 1920003 1918770 - 410PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
1.60E-50
9.20E-25
1.50E-10
WP_171056853.1 1920250 1921090 + 279PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.00E-55
7.30E-26

Results for WP_004730992.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004730980.1 3136271 3133691 - 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
7.70E-74
1.80E-39
2.30E-31
3.50E-24
8.20E-18
WP_004730982.1 3137137 3136477 - 219PF01144CoA_transCoenzyme A transferase2.70E-31
WP_004730985.1 3137808 3137136 - 223PF01144CoA_transCoenzyme A transferase8.80E-65
WP_004646972.1 3139129 3137848 - 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_004646973.1 3140583 3139383 - 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004730987.1 3141769 3140614 - 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_004280319.1 3142271 3143108 + 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_222112174.1 3143335 3145048 + 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.00E-50
2.80E-07
9.00E-07
2.60E-06
5.00E-06
WP_004730992.1 3147542 3145340 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
3.40E-73
8.80E-09
WP_085064590.1 3148654 3147883 - 256NO PFAM MATCH---
WP_004730996.1 3150437 3148781 - 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.20E-95
1.30E-41
7.70E-04
WP_085064589.1 3151924 3150448 - 491PF00171AldedhAldehyde dehydrogenase family9.50E-175
WP_004731001.1 3152524 3151945 - 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_004731003.1 3152794 3154831 + 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-175
WP_004280329.1 3154859 3155468 + 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_004731005.1 3157697 3155531 - 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.70E-28
2.30E-11
WP_004731007.1 3159115 3158197 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14

Results for WP_004756108.1 [Acinetobacter sp. CIP 102082] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 2020121 2019611 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004756116.1 2022794 2020169 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
7.20E-73
4.40E-66
3.60E-28
1.40E-12
3.60E-04
WP_004681775.1 2023281 2022930 - 116PF13511DUF4124Domain of unknown function (DUF4124)5.50E-11
WP_004756113.1 2023788 2025516 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.60E-58
8.70E-49
1.90E-44
WP_004678407.1 2025512 2026004 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 2026129 2027146 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004756110.1 2027838 2029902 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
5.20E-73
3.40E-41
6.30E-38
WP_010589466.1 2030015 2030933 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-34
6.40E-14
WP_004756108.1 2031158 2033357 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
2.70E-72
3.50E-08
WP_034422238.1 2033581 2034640 + 352PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
2.10E-22
2.30E-11
WP_004739665.1 2034665 2034752 + 29INFERRED GENE---
WP_004756106.1 2034831 2036547 + 571PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.00E-113
9.70E-23
WP_004756104.1 2036536 2037970 + 477PF13749
PF04326
PF13412
PF01047
PF12802
HATPase_c_4
AlbA_2
HTH_24
MarR
MarR_2
Putative ATP-dependent DNA helicase recG C-terminal
Putative DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
MarR family
1.70E-23
9.10E-22
1.00E-09
1.40E-06
2.50E-06
WP_004756103.1 2037984 2039331 + 448PF01420Methylase_SType I restriction modification DNA specificity domain2.00E-17
WP_004756100.1 2039323 2039626 + 100PF07751Abi_2Abi-like protein1.60E-07
WP_141629355.1 2040678 2039587 - 363PF01609DDE_Tnp_1Transposase DDE domain2.20E-16
WP_004756097.1 2040719 2041481 + 253PF07751Abi_2Abi-like protein8.60E-39

Results for WP_004756108.1 [Acinetobacter sp. CIP 102082] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 2020121 2019611 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004756116.1 2022794 2020169 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
7.20E-73
4.40E-66
3.60E-28
1.40E-12
3.60E-04
WP_004681775.1 2023281 2022930 - 116PF13511DUF4124Domain of unknown function (DUF4124)5.50E-11
WP_004756113.1 2023788 2025516 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.60E-58
8.70E-49
1.90E-44
WP_004678407.1 2025512 2026004 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 2026129 2027146 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004756110.1 2027838 2029902 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
5.20E-73
3.40E-41
6.30E-38
WP_010589466.1 2030015 2030933 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-34
6.40E-14
WP_004756108.1 2031158 2033357 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
2.70E-72
3.50E-08
WP_034422238.1 2033581 2034640 + 352PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
2.10E-22
2.30E-11
WP_004739665.1 2034665 2034752 + 29INFERRED GENE---
WP_004756106.1 2034831 2036547 + 571PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.00E-113
9.70E-23
WP_004756104.1 2036536 2037970 + 477PF13749
PF04326
PF13412
PF01047
PF12802
HATPase_c_4
AlbA_2
HTH_24
MarR
MarR_2
Putative ATP-dependent DNA helicase recG C-terminal
Putative DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
MarR family
1.70E-23
9.10E-22
1.00E-09
1.40E-06
2.50E-06
WP_004756103.1 2037984 2039331 + 448PF01420Methylase_SType I restriction modification DNA specificity domain2.00E-17
WP_004756100.1 2039323 2039626 + 100PF07751Abi_2Abi-like protein1.60E-07
WP_141629355.1 2040678 2039587 - 363PF01609DDE_Tnp_1Transposase DDE domain2.20E-16
WP_004756097.1 2040719 2041481 + 253PF07751Abi_2Abi-like protein8.60E-39

Results for WP_004785685.1 [Acinetobacter sp. ACNIH1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004785671.1 1291756 1293907 + 716PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-27
3.80E-11
WP_004785673.1 1294580 1293971 - 202PF01914MarCMarC family integral membrane protein5.00E-14
WP_004785675.1 1296645 1294608 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.40E-174
WP_004785677.1 1296915 1297494 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
2.50E-28
1.30E-11
WP_004785680.1 1297515 1298991 + 491PF00171AldedhAldehyde dehydrogenase family5.80E-174
WP_004785682.1 1299001 1300657 + 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
1.80E-97
1.70E-41
WP_104426122.1 1300784 1301567 + 260NO PFAM MATCH---
WP_004282326.1 1302435 1301553 - 293PF13612
PF01609
DDE_Tnp_1_3
DDE_Tnp_1
Transposase DDE domain
Transposase DDE domain
1.90E-25
3.40E-14
WP_004785685.1 1302891 1305090 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
9.50E-75
1.20E-73
6.90E-09
WP_004785687.1 1306089 1305252 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
6.20E-12
1.40E-04
WP_034171043.1 1306656 1307811 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
4.20E-48
5.30E-32
3.30E-29
3.20E-25
WP_004785690.1 1307843 1309043 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.40E-35
1.20E-27
2.90E-20
1.70E-04
WP_004785691.1 1309253 1310534 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
2.90E-60
1.80E-26
8.00E-05
1.10E-04
WP_004785693.1 1310584 1311253 + 222PF01144CoA_transCoenzyme A transferase1.20E-64
WP_004785695.1 1311252 1311927 + 224PF01144CoA_transCoenzyme A transferase4.40E-32
WP_104426124.1 1312110 1312933 + 273PF13359
PF01609
PF13613
DDE_Tnp_4
DDE_Tnp_1
HTH_Tnp_4
DDE superfamily endonuclease
Transposase DDE domain
Helix-turn-helix of DDE superfamily endonuclease
1.20E-23
4.10E-21
2.10E-11
WP_004785696.1 1314467 1313267 - 399PF07690MFS_1Major Facilitator Superfamily1.40E-28

Results for WP_004760774.1 [Acinetobacter sp. CIP 102129] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004760766.1 512176 511666 - 169PF04390LptELipopolysaccharide-assembly5.40E-04
WP_004760767.1 514864 512224 - 879PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
2.20E-68
2.10E-64
2.80E-28
1.80E-11
2.90E-04
WP_004760768.1 515352 515001 - 116PF13511DUF4124Domain of unknown function (DUF4124)1.50E-11
WP_004760769.1 515859 517587 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.70E-58
8.40E-49
9.10E-45
WP_004760770.1 517583 518075 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.20E-17
3.80E-12
WP_004760771.1 518178 519195 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
2.00E-75
2.20E-58
5.80E-06
6.40E-05
2.20E-04
WP_004760772.1 519886 521950 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
2.50E-73
3.40E-41
9.30E-40
WP_034431022.1 522063 522981 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.40E-35
6.50E-14
WP_004760774.1 523207 525406 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
1.80E-72
3.30E-08
WP_034432369.1 525630 526689 + 352PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
1.00E-21
1.70E-10
WP_004739665.1 526714 526801 + 29INFERRED GENE---
WP_004678400.1 526880 528611 + 576PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.10E-113
2.20E-22
WP_004760777.1 528600 528759 + 52NO PFAM MATCH---
WP_155756466.1 530005 530216 + 69PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain2.50E-16
WP_004760778.1 530239 530539 + 99PF17761DUF1016_NDUF1016 N-terminal domain4.00E-20
WP_004760780.1 530535 531882 + 448PF01420Methylase_SType I restriction modification DNA specificity domain3.80E-23
WP_004760782.1 531884 532175 + 96NO PFAM MATCH---

Results for WP_004798223.1 [Acinetobacter sp. CIP 102637] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 42476 41966 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004798214.1 45149 42524 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
2.50E-71
3.90E-67
4.70E-28
1.50E-12
2.10E-04
WP_004798216.1 45643 45292 - 116PF13511DUF4124Domain of unknown function (DUF4124)4.60E-10
WP_004798219.1 46150 47878 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
2.50E-58
8.70E-49
2.70E-45
WP_004678407.1 47874 48366 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 48491 49508 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004798221.1 50199 52263 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
2.80E-73
3.40E-41
9.30E-40
WP_034431022.1 52376 53294 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.40E-35
6.50E-14
WP_004798223.1 53520 55719 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
5.20E-72
3.30E-08
WP_005401363.1 55943 56201 + 86INFERRED GENE---
WP_004739665.1 56965 57052 + 29INFERRED GENE---
WP_004798226.1 57131 58862 + 576PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.10E-113
1.70E-22
WP_004760777.1 58851 59010 + 52NO PFAM MATCH---
WP_081399067.1 59728 59953 + 74PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain1.90E-17
WP_004760778.1 59976 60276 + 99PF17761DUF1016_NDUF1016 N-terminal domain4.00E-20
WP_004760780.1 60272 61619 + 448PF01420Methylase_SType I restriction modification DNA specificity domain3.80E-23
WP_004760782.1 61621 61912 + 96NO PFAM MATCH---

Results for WP_004806905.1 [Acinetobacter sp. CIP 56.2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007483169.1 2153396 2154218 + 274INFERRED GENE---
WP_004806895.1 2154214 2155801 + 528PF03321GH3GH3 auxin-responsive promoter8.10E-81
WP_004806896.1 2155797 2157120 + 440PF02321OEPOuter membrane efflux protein1.70E-46
WP_004806898.1 2157119 2158286 + 388NO PFAM MATCH---
WP_004806899.1 2158829 2158358 - 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.20E-30
WP_004653570.1 2159166 2158806 - 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
1.20E-14
6.00E-08
4.00E-05
5.40E-05
WP_004806901.1 2160152 2159252 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.70E-46
2.50E-04
WP_032865144.1 2160241 2161114 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-35
6.90E-18
WP_004806905.1 2161361 2163566 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.30E-76
3.10E-71
1.60E-08
WP_004806907.1 2163845 2164157 + 103PF03713DUF305Domain of unknown function (DUF305)1.20E-14
WP_004806909.1 2164264 2164606 + 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain4.10E-09
WP_004653564.1 2164711 2164900 + 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_004806911.1 2165457 2164998 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
2.40E-21
5.90E-18
4.10E-16
WP_004806913.1 2167955 2165468 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
4.60E-57
5.90E-45
4.90E-36
6.90E-10
6.30E-06
WP_004806915.1 2169665 2168132 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.50E-23
9.70E-17
3.20E-13
1.40E-11
5.80E-09
WP_004806916.1 2169780 2170806 + 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.70E-32
2.10E-12
4.30E-07
WP_004806918.1 2170909 2171641 + 243PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.50E-17
5.40E-06
5.80E-05

Results for WP_004772281.1 [Acinetobacter sp. NIPH 758] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004772266.1 1200156 1198692 - 487PF01425AmidaseAmidase4.20E-87
WP_004772268.1 1200956 1200242 - 237PF00196GerEBacterial regulatory proteins, luxR family2.80E-17
WP_004772270.1 1202111 1201085 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.10E-34
1.50E-12
3.30E-05
WP_004772271.1 1202224 1203757 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
3.40E-22
5.20E-17
3.60E-12
4.60E-10
1.10E-08
WP_004772273.1 1203757 1204600 + 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.20E-47
1.30E-33
2.00E-10
WP_004772276.1 1204913 1207397 + 827PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.90E-58
8.40E-45
6.90E-35
5.90E-10
9.90E-06
WP_004772277.1 1207408 1207867 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
8.80E-22
2.00E-18
4.00E-16
WP_004772280.1 1208157 1207968 - 62PF00403HMAHeavy-metal-associated domain3.40E-11
WP_004772281.1 1210522 1208317 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.90E-75
7.10E-73
4.30E-08
WP_004772283.1 1211646 1210773 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.10E-32
2.00E-17
WP_004772284.1 1211736 1212630 + 297PF00892EamAEamA-like transporter family1.30E-47
WP_004772285.1 1212722 1213082 + 119PF12840
PF01022
PF13412
HTH_20
HTH_5
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
4.70E-14
5.40E-08
3.90E-04
WP_004772287.1 1213059 1213533 + 157PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.30E-29
WP_004772288.1 1214764 1213603 - 386PF13527Acetyltransf_9Acetyltransferase (GNAT) domain4.50E-04
WP_004772289.1 1216098 1214760 - 445PF02321OEPOuter membrane efflux protein1.30E-45
WP_004772290.1 1217681 1216094 - 528PF03321GH3GH3 auxin-responsive promoter5.50E-81
WP_004772291.1 1218499 1217677 - 273NO PFAM MATCH---

Results for WP_004756108.1 [Acinetobacter sp. CIP 102082] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 2020121 2019611 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004756116.1 2022794 2020169 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
7.20E-73
4.40E-66
3.60E-28
1.40E-12
3.60E-04
WP_004681775.1 2023281 2022930 - 116PF13511DUF4124Domain of unknown function (DUF4124)5.50E-11
WP_004756113.1 2023788 2025516 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.60E-58
8.70E-49
1.90E-44
WP_004678407.1 2025512 2026004 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 2026129 2027146 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_004756110.1 2027838 2029902 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
5.20E-73
3.40E-41
6.30E-38
WP_010589466.1 2030015 2030933 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-34
6.40E-14
WP_004756108.1 2031158 2033357 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
2.70E-72
3.50E-08
WP_034422238.1 2033581 2034640 + 352PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
2.10E-22
2.30E-11
WP_004739665.1 2034665 2034752 + 29INFERRED GENE---
WP_004756106.1 2034831 2036547 + 571PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.00E-113
9.70E-23
WP_004756104.1 2036536 2037970 + 477PF13749
PF04326
PF13412
PF01047
PF12802
HATPase_c_4
AlbA_2
HTH_24
MarR
MarR_2
Putative ATP-dependent DNA helicase recG C-terminal
Putative DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
MarR family
1.70E-23
9.10E-22
1.00E-09
1.40E-06
2.50E-06
WP_004756103.1 2037984 2039331 + 448PF01420Methylase_SType I restriction modification DNA specificity domain2.00E-17
WP_004756100.1 2039323 2039626 + 100PF07751Abi_2Abi-like protein1.60E-07
WP_141629355.1 2040678 2039587 - 363PF01609DDE_Tnp_1Transposase DDE domain2.20E-16
WP_004756097.1 2040719 2041481 + 253PF07751Abi_2Abi-like protein8.60E-39

Results for WP_004821589.1 [Acinetobacter guillouiae NIPH 991] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004821572.1 2427381 2428293 + 303PF07859
PF20434
PF00135
Abhydrolase_3
BD-FAE
COesterase
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
7.70E-69
2.90E-19
7.30E-10
WP_004821574.1 2429426 2428400 - 341PF16113
PF00378
ECH_2
ECH_1
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.20E-95
2.70E-32
WP_004821576.1 2430215 2429441 - 257PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
3.60E-81
2.20E-38
WP_004821578.1 2431398 2430270 - 375PF00441
PF02771
PF08028
PF02770
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
9.90E-53
1.10E-36
1.10E-31
4.00E-26
WP_004821580.1 2433124 2431471 - 550PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
8.60E-76
1.10E-23
WP_004821583.1 2434118 2433227 - 296PF03446
PF14833
PF03807
PF07991
PF02826
NAD_binding_2
NAD_binding_11
F420_oxidored
IlvN
2-Hacid_dh_C
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
Acetohydroxy acid isomeroreductase, NADPH-binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
3.00E-50
4.80E-36
3.50E-07
9.70E-06
2.90E-05
WP_004821585.1 2435651 2434133 - 505PF00171AldedhAldehyde dehydrogenase family2.40E-143
WP_004821587.1 2435816 2436698 + 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.60E-28
2.50E-15
WP_004821589.1 2439054 2436849 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.50E-74
9.40E-74
3.00E-08
WP_004720371.1 2439894 2439303 - 196PF02342TerDTerD domain3.80E-55
WP_004720370.1 2440628 2439911 - 238PF01987AIM24Mitochondrial biogenesis AIM242.30E-48
WP_004821592.1 2441950 2440642 - 435PF10138
PF02342
PF07002
PF00092
vWA-TerF-like
TerD
Copine
VWA
vWA found in TerF C terminus
TerD domain
Copine
von Willebrand factor type A domain
1.10E-75
2.20E-26
2.60E-10
1.30E-04
WP_004821595.1 2442645 2442066 - 192PF02342TerDTerD domain1.50E-80
WP_004821597.1 2443761 2442648 - 370PF04332
PF03741
DUF475
TerC
Protein of unknown function (DUF475)
Integral membrane protein TerC family
2.30E-116
3.00E-16
WP_004821599.1 2444353 2443777 - 191PF02342TerDTerD domain1.80E-87
WP_004821601.1 2445601 2444410 - 396PF02342TerDTerD domain2.90E-34
WP_228128950.1 2445966 2446923 + 318PF15632
PF13535
PF02655
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp domain
ATP-grasp domain
7.30E-28
1.20E-05
9.50E-04

Results for WP_004830706.1 [Acinetobacter bereziniae NIPH 3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004830697.1 318594 318915 + 106PF00576
PF11974
PF13620
PF11589
Transthyretin
bMG3
CarboxypepD_reg
DUF3244
HIUase/Transthyretin family
Bacterial alpha-2-macroglobulin MG3 domain
Carboxypeptidase regulatory-like domain
Domain of unknown function (DUF3244)
4.70E-34
2.10E-04
3.50E-04
9.30E-04
WP_004830698.1 319059 319782 + 240PF03502Channel_TsxNucleoside-specific channel-forming protein, Tsx6.00E-12
WP_026040376.1 320426 319931 - 164PF04115Ureidogly_lyaseUreidoglycolate lyase4.40E-47
WP_004830700.1 321438 320430 - 335PF03561AllantoicaseAllantoicase repeat1.00E-98
WP_004830701.1 321650 322808 + 385PF01494
PF13450
PF07992
PF00890
PF01134
FAD_binding_3
NAD_binding_8
Pyr_redox_2
FAD_binding_2
GIDA
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Glucose inhibited division protein A
1.60E-29
1.10E-05
1.20E-05
8.90E-05
1.70E-04
WP_004830702.1 323914 322981 - 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-28
3.30E-16
WP_004830704.1 324203 325259 + 351PF00355
PF19112
Rieske
VanA_C
Rieske [2Fe-2S] domain
Vanillate O-demethylase oxygenase C-terminal domain
2.20E-19
3.90E-17
WP_004830705.1 326378 325451 - 308PF00892EamAEamA-like transporter family1.20E-15
WP_004830706.1 327003 329208 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.20E-75
5.80E-74
1.30E-08
WP_004830707.1 329469 330471 + 333PF18426
PF18443
Tli4_C
Tli4_N
Tle cognate immunity protein 4 C-terminal domain
Tle cognate immunity protein 4 N-terminal domain
4.60E-21
5.70E-13
WP_004830708.1 330524 331526 + 333PF18426
PF18443
Tli4_C
Tli4_N
Tle cognate immunity protein 4 C-terminal domain
Tle cognate immunity protein 4 N-terminal domain
4.10E-21
3.50E-12
WP_004830710.1 331579 332587 + 335PF18426
PF18443
Tli4_C
Tli4_N
Tle cognate immunity protein 4 C-terminal domain
Tle cognate immunity protein 4 N-terminal domain
9.20E-23
6.00E-09
WP_004830711.1 332589 334497 + 635PF07819
PF02450
PF05057
PGAP1
LCAT
DUF676
PGAP1-like protein
Lecithin:cholesterol acyltransferase
Putative serine esterase (DUF676)
3.30E-07
6.20E-06
4.50E-04
WP_004830712.1 335555 334673 - 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-27
1.20E-14
WP_004830713.1 335720 337238 + 505PF00171AldedhAldehyde dehydrogenase family1.30E-142
WP_004830714.1 337253 338144 + 296PF03446
PF14833
PF03807
PF02826
PF07991
NAD_binding_2
NAD_binding_11
F420_oxidored
2-Hacid_dh_C
IlvN
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Acetohydroxy acid isomeroreductase, NADPH-binding domain
2.10E-47
6.00E-37
1.40E-07
7.40E-06
1.80E-05
WP_004830715.1 338238 339900 + 553PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.80E-75
9.20E-23

Results for WP_004809371.1 [Acinetobacter schindleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004809385.1 1614795 1615809 + 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.90E-17
5.00E-04
WP_004809384.1 1615899 1616103 + 67NO PFAM MATCH---
WP_004809382.1 1616720 1616111 - 202PF01914MarCMarC family integral membrane protein1.20E-14
YP_004994476.1 1616748 1618799 + 683INFERRED GENE---
WP_004809378.1 1619054 1619660 + 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
1.00E-29
2.50E-11
WP_004809376.1 1619656 1621132 + 491PF00171AldedhAldehyde dehydrogenase family5.40E-175
WP_108675984.1 1621143 1622799 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.30E-96
2.20E-40
5.40E-04
WP_004809373.1 1622926 1623697 + 256NO PFAM MATCH---
WP_004809371.1 1624039 1626241 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.70E-75
6.90E-73
8.30E-09
WP_004809370.1 1626483 1627482 + 332PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain6.70E-04
WP_004809367.1 1627469 1628264 + 264PF02585PIG-LGlcNAc-PI de-N-acetylase1.10E-24
WP_004809365.1 1628244 1628853 + 202PF05401
PF13649
PF08241
PF13489
PF08242
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-13
7.00E-11
1.40E-09
2.10E-08
3.30E-08
WP_004809364.1 1628849 1629572 + 240PF00535
PF13641
PF13632
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
4.10E-11
3.60E-08
5.90E-05
6.90E-04
WP_034423874.1 1629782 1631015 + 410PF07690MFS_1Major Facilitator Superfamily2.10E-27
WP_004809362.1 1632477 1631046 - 476PF00982Glyco_transf_20Glycosyltransferase family 201.30E-95
WP_228127294.1 1633295 1632443 - 283PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
2.00E-26
4.10E-13
5.50E-06
WP_004809360.1 1633857 1634649 + 263PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)2.60E-41

Results for WP_004863931.1 [Acinetobacter gerneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020846406.1 39570 39804 + 77PF00036
PF13405
PF13202
PF13499
PF10591
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
SPARC_Ca_bdg
EF hand
EF-hand domain
EF hand
EF-hand domain pair
Secreted protein acidic and rich in cysteine Ca binding region
6.10E-10
1.50E-09
2.00E-08
1.30E-06
2.20E-05
WP_004863950.1 41096 39905 - 396PF13365
PF13180
PF00089
PF00595
PF17820
Trypsin_2
PDZ_2
Trypsin
PDZ
PDZ_6
Trypsin-like peptidase domain
PDZ domain
Trypsin
PDZ domain
PDZ domain
4.80E-31
7.60E-17
2.10E-16
1.90E-14
8.60E-13
WP_004863947.1 41331 42090 + 252PF01784NIF3NIF3 (NGG1p interacting factor 3)3.20E-62
WP_004863946.1 42354 42981 + 208PF02777
PF00081
Sod_Fe_C
Sod_Fe_N
Iron/manganese superoxide dismutases, C-terminal domain
Iron/manganese superoxide dismutases, alpha-hairpin domain
1.10E-36
8.50E-33
WP_004863943.1 43854 43317 - 178NO PFAM MATCH---
WP_004863940.1 44266 44440 + 57NO PFAM MATCH---
WP_004863938.1 44780 45203 + 140PF10881
PF04480
PF18741
DUF2726
DUF559
MTES_1575
Protein of unknown function (DUF2726)
Protein of unknown function (DUF559)
REase_MTES_1575
5.60E-17
6.10E-09
3.90E-04
WP_004863935.1 46208 45329 - 292PF10118Metal_hydrolPredicted metal-dependent hydrolase2.60E-73
WP_004863931.1 46663 48865 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-73
8.60E-72
9.10E-09
WP_004863928.1 49430 48989 - 146NO PFAM MATCH---
WP_004863923.1 49804 49555 - 82NO PFAM MATCH---
WP_004863920.1 50620 50170 - 149NO PFAM MATCH---
WP_004863918.1 51710 50831 - 292PF01040UbiAUbiA prenyltransferase family1.40E-57
WP_171066265.1 52225 51718 - 168PF04345Chor_lyaseChorismate lyase5.10E-19
WP_004863909.1 54201 52503 - 565PF09330
PF01565
Lact-deh-memb
FAD_binding_4
D-lactate dehydrogenase, membrane binding
FAD binding domain
1.40E-135
1.50E-07
WP_004863906.1 55647 54492 - 384PF01070
PF00478
FMN_dh
IMPDH
FMN-dependent dehydrogenase
IMP dehydrogenase / GMP reductase domain
1.80E-123
2.10E-06
WP_004863904.1 56393 55649 - 247PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.60E-24
3.60E-20

Results for WP_004879591.1 [Acinetobacter venetianus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026094104.1 281883 283158 + 424PF00208
PF02812
ELFV_dehydrog
ELFV_dehydrog_N
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
6.30E-73
1.60E-55
WP_004879612.1 283233 284439 + 401PF00202
PF00155
Aminotran_3
Aminotran_1_2
Aminotransferase class-III
Aminotransferase class I and II
3.70E-123
2.70E-04
WP_004879608.1 284460 285504 + 347PF04958AstAArginine N-succinyltransferase beta subunit4.40E-136
WP_004879606.1 285503 286973 + 489PF00171AldedhAldehyde dehydrogenase family2.20E-121
WP_004879603.1 286991 288332 + 446PF04996AstBSuccinylarginine dihydrolase3.70E-217
WP_004879601.1 288365 289340 + 324PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.10E-54
WP_004879598.1 289511 290993 + 493PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
2.40E-116
1.10E-39
WP_004879593.1 291171 291729 + 185PF08212
PF00061
Lipocalin_2
Lipocalin
Lipocalin-like domain
Lipocalin / cytosolic fatty-acid binding protein family
2.40E-48
6.20E-05
WP_004879591.1 292057 294259 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.60E-75
9.90E-74
1.50E-08
WP_004879587.1 294487 295282 + 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.00E-50
6.70E-37
1.60E-09
WP_004879584.1 295506 295323 - 60PF13602ADH_zinc_N_2Zinc-binding dehydrogenase5.30E-10
WP_004653525.1 295552 295792 + 80INFERRED GENE---
WP_004879580.1 299587 296116 - 1156PF20169
PF01558
PF02775
DUF6537
POR
TPP_enzyme_C
Family of unknown function (DUF6537)
Pyruvate ferredoxin/flavodoxin oxidoreductase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
2.20E-49
1.90E-24
5.10E-06
WP_004879577.1 299789 300728 + 312PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.20E-34
1.10E-15
WP_004879574.1 301732 300829 - 300PF00682HMGL-likeHMGL-like3.80E-54
WP_004879572.1 303720 301728 - 663PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
4.40E-75
1.90E-45
8.40E-37
8.00E-15
7.40E-12
WP_004879570.1 304535 303731 - 267PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.10E-53
2.80E-34

Results for WP_004894810.1 [Acinetobacter schindleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004894832.1 110024 111038 + 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.70E-17
6.30E-04
WP_004894830.1 111129 111333 + 67NO PFAM MATCH---
WP_004894827.1 111950 111341 - 202PF01914MarCMarC family integral membrane protein1.80E-14
YP_004994476.1 111978 114029 + 683INFERRED GENE---
WP_004894821.1 114285 114891 + 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
5.80E-30
9.30E-12
WP_004894820.1 114887 116363 + 491PF00171AldedhAldehyde dehydrogenase family2.10E-175
WP_004894819.1 116374 118030 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
8.30E-96
2.70E-41
5.60E-04
WP_004894816.1 118157 118928 + 256NO PFAM MATCH---
WP_004894810.1 119269 121471 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.50E-75
3.60E-73
9.30E-09
WP_004894805.1 121713 122712 + 332NO PFAM MATCH---
WP_004894801.1 122699 123494 + 264PF02585PIG-LGlcNAc-PI de-N-acetylase9.30E-25
WP_004894799.1 123474 124083 + 202PF05401
PF13649
PF08241
PF08242
PF13489
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.40E-13
1.60E-11
2.50E-10
8.30E-09
9.10E-09
WP_004894797.1 124079 124802 + 240PF00535
PF13641
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
2.50E-11
1.50E-08
1.40E-04
WP_017401496.1 125012 126245 + 410PF07690MFS_1Major Facilitator Superfamily3.90E-25
WP_004894793.1 127707 126276 - 476PF00982Glyco_transf_20Glycosyltransferase family 205.00E-95
WP_004894791.1 128561 127673 - 295PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
7.00E-27
3.50E-13
5.60E-06
WP_004894789.1 129092 129887 + 264PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)3.40E-39

Results for WP_004979980.1 [Acinetobacter johnsonii ANC 3681] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004979960.1 235986 235605 - 126NO PFAM MATCH---
WP_004979962.1 236627 235982 - 214PF13523
PF13302
Acetyltransf_8
Acetyltransf_3
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.50E-34
1.70E-04
WP_004979965.1 238491 236655 - 611PF04183
PF06276
IucA_IucC
FhuF
IucA / IucC family
Ferric iron reductase FhuF-like transporter
1.90E-68
3.00E-34
WP_004979968.1 239939 238487 - 483PF13434
PF13738
PF13454
Lys_Orn_oxgnase
Pyr_redox_3
NAD_binding_9
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Pyridine nucleotide-disulphide oxidoreductase
FAD-NAD(P)-binding
4.60E-108
4.30E-10
1.70E-05
WP_004979970.1 241716 239931 - 594PF04183
PF06276
IucA_IucC
FhuF
IucA / IucC family
Ferric iron reductase FhuF-like transporter
3.70E-51
2.00E-36
WP_004979971.1 242601 242133 - 155PF04073tRNA_editAminoacyl-tRNA editing domain7.30E-25
WP_004979972.1 243965 242768 - 398PF00487FA_desaturaseFatty acid desaturase6.30E-26
WP_004979973.1 244134 245082 + 315PF12852
PF00165
PF12833
Cupin_6
HTH_AraC
HTH_18
Cupin
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
1.20E-24
8.10E-24
3.00E-22
WP_004979980.1 245349 247554 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
7.50E-74
2.00E-72
8.20E-08
WP_004979982.1 248795 247622 - 390PF02684LpxBLipid-A-disaccharide synthetase3.50E-105
WP_004979984.1 249478 251038 + 519PF03929PepSY_TMPepSY-associated TM region6.90E-61
WP_004979986.1 251034 251328 + 97NO PFAM MATCH---
WP_228128101.1 251451 252114 + 220NO PFAM MATCH---
WP_004979988.1 252220 253117 + 298PF01925
PF07698
TauE
7TM-7TMR_HD
Sulfite exporter TauE/SafE
7TM receptor with intracellular HD hydrolase
1.90E-48
4.10E-04
WP_004693350.1 253256 254348 + 363PF00793DAHP_synth_1DAHP synthetase I family2.50E-95
WP_004693352.1 254404 254929 + 174PF04273BLH_phosphataseBeta-lactamase hydrolase-like protein, phosphatase-like domain7.60E-05
WP_004979990.1 255405 254916 - 162PF02542YgbBYgbB family2.30E-64

Results for WP_004973821.1 [Acinetobacter towneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_096902340.1 9366 8910 - 151PF01220DHquinase_IIDehydroquinase class II2.50E-60
WP_104851943.1 11740 10333 - 468PF00512
PF02518
PF08521
HisKA
HATPase_c
2CSK_N
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Two-component sensor kinase N-terminal
5.00E-10
2.20E-09
3.50E-09
WP_104851944.1 12405 11736 - 222PF00072
PF00486
PF06490
Response_reg
Trans_reg_C
FleQ
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
Flagellar regulatory protein FleQ
1.70E-24
2.00E-22
2.50E-05
WP_253116781.1 12575 14639 + 687PF11412
PF02683
PF13899
PF00085
PF13098
DsbC
DsbD
Thioredoxin_7
Thioredoxin
Thioredoxin_2
Disulphide bond corrector protein DsbC
Cytochrome C biogenesis protein transmembrane region
Thioredoxin-like
Thioredoxin
Thioredoxin-like domain
3.60E-25
9.10E-16
6.20E-09
1.80E-08
1.00E-06
WP_104851946.1 14635 15466 + 276PF00578
PF08534
PF00085
PF13098
PF13905
AhpC-TSA
Redoxin
Thioredoxin
Thioredoxin_2
Thioredoxin_8
AhpC/TSA family
Redoxin
Thioredoxin
Thioredoxin-like domain
Thioredoxin-like
8.90E-14
4.60E-12
6.70E-08
2.10E-07
2.20E-07
WP_004973828.1 15526 16285 + 252PF13098
PF13462
Thioredoxin_2
Thioredoxin_4
Thioredoxin-like domain
Thioredoxin
2.30E-14
8.50E-09
WP_178319301.1 17024 16394 - 209PF13649
PF03848
PF08241
PF08242
Methyltransf_25
TehB
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Tellurite resistance protein TehB
Methyltransferase domain
Methyltransferase domain
2.00E-10
1.30E-05
2.10E-05
7.90E-04
WP_004973824.1 17402 17054 - 115PF02627CMDCarboxymuconolactone decarboxylase family1.40E-20
WP_004973821.1 17695 19903 + 735PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.10E-75
2.90E-73
1.50E-08
WP_004973819.1 20398 20083 - 104PF01381
PF13560
PF15731
PF20432
PF12844
HTH_3
HTH_31
MqsA_antitoxin
Xre-like-HTH
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Antitoxin Xre-like helix-turn-helix domain
Helix-turn-helix domain
9.40E-08
5.20E-06
4.50E-05
1.80E-04
3.60E-04
WP_253116783.1 22109 20813 - 431PF00817
PF11799
PF13438
PF11798
PF11731
IMS
IMS_C
DUF4113
IMS_HHH
Cdd1
impB/mucB/samB family
impB/mucB/samB family C-terminal domain
Domain of unknown function (DUF4113)
IMS family HHH motif
Pathogenicity locus
1.00E-27
1.30E-12
9.30E-08
1.20E-05
5.70E-04
WP_253116785.1 22764 22149 - 204PF00717Peptidase_S24Peptidase S24-like1.40E-16
WP_168419301.1 22961 23543 + 193NO PFAM MATCH---
WP_253116787.1 23635 24823 + 395PF01636
PF06293
PF07914
PF01633
PF02958
APH
Kdo
DUF1679
Choline_kinase
EcKL
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
Uncharacterized oxidoreductase dhs-27
Choline/ethanolamine kinase
Ecdysteroid kinase-like family
8.50E-22
6.70E-05
1.10E-04
3.20E-04
9.20E-04
WP_253116789.1 26474 25469 - 334PF13379
PF09084
NMT1_2
NMT1
NMT1-like family
NMT1/THI5 like
7.80E-54
9.80E-07
WP_070154220.1 27063 26484 - 192PF03861
PF00072
ANTAR
Response_reg
ANTAR domain
Response regulator receiver domain
7.50E-14
6.00E-05

Results for WP_005031645.1 [Acinetobacter bereziniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005031633.1 8565 7437 - 375PF00441
PF02771
PF08028
PF02770
PF11794
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
HpaB_N
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
4-hydroxyphenylacetate 3-hydroxylase N terminal
2.20E-52
3.30E-36
1.80E-31
2.50E-27
8.30E-04
WP_005031634.1 10290 8628 - 553PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.60E-75
9.50E-23
WP_005031635.1 11275 10384 - 296PF03446
PF14833
PF03807
PF02826
PF07991
NAD_binding_2
NAD_binding_11
F420_oxidored
2-Hacid_dh_C
IlvN
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Acetohydroxy acid isomeroreductase, NADPH-binding domain
8.60E-48
6.00E-37
9.90E-08
6.30E-06
1.60E-05
WP_005031636.1 12808 11290 - 505PF00171AldedhAldehyde dehydrogenase family3.20E-143
WP_000861798.1 12973 13854 + 293INFERRED GENE---
WP_004830711.1 15938 14030 - 635PF07819
PF02450
PF05057
PGAP1
LCAT
DUF676
PGAP1-like protein
Lecithin:cholesterol acyltransferase
Putative serine esterase (DUF676)
3.30E-07
6.20E-06
4.50E-04
WP_042066484.1 16948 15940 - 335PF18426
PF18443
Tli4_C
Tli4_N
Tle cognate immunity protein 4 C-terminal domain
Tle cognate immunity protein 4 N-terminal domain
9.20E-23
4.70E-09
WP_004830707.1 18003 17001 - 333PF18426
PF18443
Tli4_C
Tli4_N
Tle cognate immunity protein 4 C-terminal domain
Tle cognate immunity protein 4 N-terminal domain
4.60E-21
5.70E-13
WP_005031645.1 20469 18264 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.20E-75
4.50E-74
3.40E-08
WP_004830705.1 21094 22021 + 308PF00892EamAEamA-like transporter family1.20E-15
WP_005031647.1 23270 22214 - 351PF00355
PF19112
Rieske
VanA_C
Rieske [2Fe-2S] domain
Vanillate O-demethylase oxygenase C-terminal domain
1.60E-19
4.00E-17
WP_004830702.1 23559 24492 + 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-28
3.30E-16
WP_004830701.1 25821 24663 - 385PF01494
PF13450
PF07992
PF00890
PF01134
FAD_binding_3
NAD_binding_8
Pyr_redox_2
FAD_binding_2
GIDA
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Glucose inhibited division protein A
1.60E-29
1.10E-05
1.20E-05
8.90E-05
1.70E-04
WP_005031649.1 26033 27041 + 335PF03561AllantoicaseAllantoicase repeat2.20E-98
WP_171499359.1 27045 27540 + 164PF04115Ureidogly_lyaseUreidoglycolate lyase4.30E-47
WP_010591391.1 28411 27688 - 240PF03502Channel_TsxNucleoside-specific channel-forming protein, Tsx1.50E-12
WP_005031656.1 28877 28556 - 106PF00576
PF13620
PF11974
PF11589
Transthyretin
CarboxypepD_reg
bMG3
DUF3244
HIUase/Transthyretin family
Carboxypeptidase regulatory-like domain
Bacterial alpha-2-macroglobulin MG3 domain
Domain of unknown function (DUF3244)
1.60E-34
1.60E-04
2.40E-04
6.40E-04

Results for WP_005009862.1 [Acinetobacter bouvetii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005009897.1 1722022 1718920 - 1033PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
0.00E+00
4.30E-11
WP_212749848.1 1723185 1722021 - 387PF16576
PF13533
PF13437
PF00364
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
HlyD family secretion protein
Biotin-requiring enzyme
1.60E-18
1.00E-12
1.20E-10
8.60E-07
WP_005009892.1 1723715 1724414 + 232PF08856DUF1826Protein of unknown function (DUF1826)1.40E-06
WP_005009890.1 1725683 1724567 - 371PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
9.40E-43
1.80E-31
4.60E-13
WP_005009874.1 1726817 1725689 - 375PF12698
PF12679
PF01061
PF12730
ABC2_membrane_3
ABC2_membrane_2
ABC2_membrane
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.20E-43
2.30E-30
2.60E-22
1.60E-05
WP_005009871.1 1728594 1726818 - 591PF00005
PF13304
PF13476
PF13604
PF00004
ABC_tran
AAA_21
AAA_23
AAA_30
AAA
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
AAA domain
ATPase family associated with various cellular activities (AAA)
1.40E-59
1.70E-24
3.10E-08
1.80E-06
2.80E-06
WP_005009869.1 1729605 1728600 - 334PF13437
PF13533
PF16576
PF00364
HlyD_3
Biotin_lipoyl_2
HlyD_D23
Biotin_lipoyl
HlyD family secretion protein
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-requiring enzyme
4.30E-16
4.90E-14
2.00E-12
6.70E-05
WP_005009867.1 1729719 1730352 + 210PF00440
PF09209
TetR_N
CecR_C
Bacterial regulatory proteins, tetR family
HTH-type transcriptional dual regulator CecR, C-terminal domain
1.10E-10
5.10E-07
WP_005009862.1 1732634 1730432 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.40E-73
1.60E-71
2.10E-08
WP_005009854.1 1735179 1733010 - 722PF19277
PF01553
GPAT_C
Acyltransferase
Glycerol-3-phosphate acyltransferase C-terminal region
Acyltransferase
1.30E-29
7.40E-21
WP_005009852.1 1736258 1735370 - 295PF00892
PF05653
EamA
Mg_trans_NIPA
EamA-like transporter family
Magnesium transporter NIPA
2.00E-14
6.00E-05
WP_005009851.1 1738104 1736475 - 542PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
3.80E-83
6.40E-10
WP_167571628.1 1738610 1738448 - 53NO PFAM MATCH---
WP_005106878.1 1738812 1739421 + 203INFERRED GENE---
WP_005009842.1 1740855 1739547 - 435PF19577
PF02530
DcaP
Porin_2
DcaP outer membrane protein
Porin subfamily
9.10E-56
8.60E-06
WP_005009841.1 1742359 1740985 - 457PF07690
PF00083
PF06779
PF03092
MFS_1
Sugar_tr
MFS_4
BT1
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
BT1 family
1.40E-46
7.10E-33
4.80E-10
2.90E-04
WP_005009840.1 1743654 1742730 - 307PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.70E-36
1.20E-22

Results for WP_005054091.1 [Acinetobacter beijerinckii ANC 3835] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005054082.1 782739 785286 + 848PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
2.30E-42
5.90E-13
6.20E-08
WP_005054083.1 785707 785371 - 111PF11804DUF3325Protein of unknown function (DUF3325)1.80E-22
WP_005054084.1 787404 785706 - 565PF03929PepSY_TMPepSY-associated TM region6.40E-67
WP_039909381.1 787756 787408 - 115PF12365DUF3649Protein of unknown function (DUF3649)2.50E-05
WP_005054086.1 790651 787816 - 944PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.40E-39
2.00E-23
WP_005054088.1 791892 791097 - 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.40E-50
5.60E-36
7.90E-10
WP_228128153.1 792420 791907 - 170PF20375DUF6670Family of unknown function (DUF6670)4.00E-38
WP_005054090.1 792993 792456 - 178PF20375DUF6670Family of unknown function (DUF6670)8.50E-24
WP_005054091.1 795412 793216 - 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-75
3.90E-72
1.10E-08
WP_005054092.1 796522 795682 - 279PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-50
1.20E-38
1.50E-13
WP_005054095.1 797600 796523 - 358PF04909Amidohydro_2Amidohydrolase6.00E-18
WP_005054096.1 799019 797852 - 388NO PFAM MATCH---
WP_039909383.1 800350 799015 - 444PF02321OEPOuter membrane efflux protein9.90E-44
WP_005054099.1 801933 800346 - 528PF03321GH3GH3 auxin-responsive promoter2.30E-74
WP_005054100.1 802751 801929 - 273NO PFAM MATCH---
WP_005054101.1 804453 802905 - 515PF07690MFS_1Major Facilitator Superfamily7.70E-40
WP_005054102.1 805541 804479 - 353PF13437
PF16576
PF13533
PF00529
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
9.20E-16
1.10E-14
8.70E-10
3.10E-06

Results for WP_005041992.1 [Acinetobacter calcoaceticus ANC 3680] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005041973.1 1983693 1984527 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
5.60E-48
4.10E-41
2.30E-14
WP_005041976.1 1984549 1986073 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.60E-16
3.10E-14
3.10E-13
6.10E-10
5.10E-07
WP_005041979.1 1986186 1987062 + 291PF04072LCMLeucine carboxyl methyltransferase3.30E-37
WP_005041981.1 1988087 1987064 - 340PF12625
PF12833
PF00165
PF13384
Arabinose_bd
HTH_18
HTH_AraC
HTH_23
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Homeodomain-like domain
2.70E-36
1.90E-15
1.30E-07
9.40E-05
WP_005041983.1 1988223 1989711 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.90E-20
7.00E-16
7.00E-12
5.20E-11
1.10E-08
WP_005041985.1 1989755 1990610 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.30E-51
1.40E-36
2.00E-11
WP_005041987.1 1990685 1991579 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
1.10E-54
6.50E-12
2.40E-09
6.40E-06
2.40E-04
WP_005041990.1 1991607 1993278 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
7.30E-17
1.20E-09
2.50E-05
4.90E-05
WP_005041992.1 1995541 1993342 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-74
1.50E-72
3.70E-08
WP_005041995.1 1997074 1995793 - 426PF03573OprDouter membrane porin, OprD family2.70E-105
WP_005041997.1 1998452 1997105 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
2.30E-47
5.20E-24
1.80E-08
WP_005042000.1 1998823 2000509 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
1.10E-76
1.30E-05
1.80E-05
WP_080632602.1 2000534 2001488 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.10E-67
WP_005042004.1 2001499 2002687 + 395PF03573OprDouter membrane porin, OprD family6.90E-35
WP_005042007.1 2002921 2003998 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
3.70E-54
9.40E-19
1.40E-05
WP_005042009.1 2004010 2004955 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.30E-12
4.50E-06
WP_080632540.1 2005691 2004998 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
7.10E-11
7.10E-11

Results for WP_005080645.1 [Acinetobacter haemolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004639188.1 2717568 2717442 - 41NO PFAM MATCH---
WP_005080660.1 2721700 2718094 - 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
4.30E-88
1.00E-65
8.70E-50
4.20E-46
1.80E-32
WP_005080657.1 2722357 2721703 - 217PF09347DUF1989Domain of unknown function (DUF1989)1.20E-61
WP_004898493.1 2722374 2723117 + 247INFERRED GENE---
WP_005080650.1 2723861 2723381 - 159PF01037
PF13412
PF13404
PF08279
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
HTH domain
8.00E-21
1.00E-17
2.40E-17
3.40E-04
WP_004639194.1 2723991 2724630 + 212PF01810LysELysE type translocator6.90E-18
WP_005080649.1 2725536 2724705 - 276PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.30E-48
7.40E-37
3.30E-13
WP_005080647.1 2726625 2725551 - 357PF04909Amidohydro_2Amidohydrolase5.00E-20
WP_005080645.1 2729165 2726960 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-74
3.40E-74
1.80E-08
WP_005080643.1 2730638 2729468 - 389NO PFAM MATCH---
WP_005080641.1 2731957 2730649 - 435PF02321OEPOuter membrane efflux protein1.90E-46
WP_005080638.1 2733561 2731974 - 528PF03321GH3GH3 auxin-responsive promoter2.10E-76
WP_007483169.1 2733557 2734001 + 148INFERRED GENE---
WP_248283525.1 2734113 2735082 + 322PF00665
PF13936
PF13565
PF13683
PF13384
rve
HTH_38
HTH_32
rve_3
HTH_23
Integrase core domain
Helix-turn-helix domain
Homeodomain-like domain
Integrase core domain
Homeodomain-like domain
4.60E-10
2.50E-09
2.10E-06
2.70E-05
4.20E-05
WP_000611201.1 2735082 2735469 + 129INFERRED GENE---
WP_005080630.1 2737142 2735594 - 515PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
4.10E-42
2.70E-05
WP_005080628.1 2738235 2737167 - 355PF13437
PF16576
PF13533
PF00529
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
1.60E-18
2.20E-16
5.30E-13
2.70E-08

Results for WP_005058992.1 [Acinetobacter beijerinckii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005059001.1 625627 626689 + 353PF13437
PF16576
PF13533
PF00529
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
1.10E-15
7.70E-15
9.80E-10
1.20E-06
WP_005059000.1 626714 628262 + 515PF07690MFS_1Major Facilitator Superfamily3.20E-39
WP_005058998.1 628414 629236 + 273NO PFAM MATCH---
WP_005058997.1 629232 630819 + 528PF03321GH3GH3 auxin-responsive promoter4.90E-76
WP_005058996.1 630815 632150 + 444PF02321OEPOuter membrane efflux protein1.40E-41
WP_005058995.1 632146 633313 + 388NO PFAM MATCH---
WP_005058994.1 633563 634640 + 358PF04909Amidohydro_2Amidohydrolase8.10E-18
WP_005058993.1 634641 635481 + 279PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.30E-49
6.50E-38
3.40E-13
WP_005058992.1 635750 637946 + 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-75
2.90E-72
1.30E-08
WP_034710481.1 638166 639252 + 361PF20375DUF6670Family of unknown function (DUF6670)1.20E-76
WP_005058990.1 639267 640062 + 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
5.70E-51
3.10E-36
6.70E-09
WP_005058989.1 640589 640937 + 115PF12365DUF3649Protein of unknown function (DUF3649)5.00E-04
WP_005058988.1 640941 642636 + 564PF03929PepSY_TMPepSY-associated TM region2.40E-66
WP_005058987.1 642635 642971 + 111PF11804DUF3325Protein of unknown function (DUF3325)4.10E-22
WP_005058986.1 645607 643057 - 849PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
1.70E-42
6.50E-14
4.80E-08
WP_005058985.1 646630 645673 - 318PF04773
PF16220
FecR
DUF4880
FecR protein
Domain of unknown function (DUF4880)
6.20E-19
6.50E-12
WP_005058984.1 647168 646652 - 171PF08281
PF04542
PF04545
PF07638
PF13384
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
ECF sigma factor
Homeodomain-like domain
6.20E-16
6.40E-11
4.60E-09
2.60E-07
8.10E-05

Results for WP_005100311.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005100298.1 1906439 1907357 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14
WP_005100301.1 1907858 1910024 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.50E-27
1.10E-10
WP_004646981.1 1910697 1910088 - 202PF01914MarCMarC family integral membrane protein9.60E-14
WP_005100304.1 1912762 1910725 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter4.10E-176
WP_004731001.1 1913032 1913611 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_005100306.1 1913632 1915108 + 491PF00171AldedhAldehyde dehydrogenase family5.30E-174
WP_005100307.1 1915119 1916775 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
6.50E-95
1.30E-41
4.70E-04
WP_005100309.1 1916904 1917675 + 256NO PFAM MATCH---
WP_005100311.1 1918017 1920225 + 735PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.20E-75
1.40E-72
8.30E-09
WP_005100313.1 1922188 1920475 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.80E-50
2.20E-07
3.60E-07
2.80E-06
5.80E-06
WP_005100316.1 1923252 1922415 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
7.90E-12
1.40E-04
WP_005100320.1 1923755 1924910 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
1.40E-31
5.00E-29
1.20E-25
WP_004646973.1 1924941 1926141 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004646972.1 1926395 1927676 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_005100322.1 1927716 1928388 + 223PF01144CoA_transCoenzyme A transferase5.40E-65
WP_005100324.1 1928387 1929047 + 219PF01144CoA_transCoenzyme A transferase2.50E-31
WP_174894405.1 1929253 1931833 + 859PF00563
PF00990
PF13426
PF00989
PF08447
EAL
GGDEF
PAS_9
PAS
PAS_3
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
8.00E-73
1.60E-39
2.50E-31
3.80E-24
7.80E-18

Results for WP_005106928.1 [Acinetobacter lwoffii NIPH 478] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005100298.1 135507 136425 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14
WP_005106920.1 136926 139092 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.70E-27
1.60E-11
WP_004280329.1 139764 139155 - 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_005106921.1 141829 139792 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter9.10E-176
WP_005106923.1 142098 142677 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
2.00E-28
1.30E-11
WP_005106924.1 142698 144174 + 491PF00171AldedhAldehyde dehydrogenase family1.60E-173
WP_005106926.1 144185 145841 + 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
6.50E-96
1.30E-41
WP_005106927.1 145968 146739 + 256NO PFAM MATCH---
WP_005106928.1 147073 149275 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.40E-75
3.60E-72
1.20E-08
WP_005106930.1 151247 149534 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
5.10E-50
2.40E-07
8.00E-07
2.80E-06
5.30E-06
WP_004280319.1 152311 151474 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_005106932.1 152814 153969 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
1.50E-31
6.30E-28
1.20E-25
WP_004646973.1 154000 155200 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_005106933.1 155454 156735 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
4.60E-51
8.20E-28
7.40E-06
2.80E-04
WP_004730985.1 156775 157447 + 223PF01144CoA_transCoenzyme A transferase8.80E-65
WP_005106934.1 157446 158106 + 219PF01144CoA_transCoenzyme A transferase2.70E-31
WP_005106935.1 158312 160892 + 859PF00563
PF00990
PF13426
PF00989
PF08447
EAL
GGDEF
PAS_9
PAS
PAS_3
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
9.70E-74
3.20E-39
2.10E-31
3.00E-24
7.30E-18

Results for WP_005160139.1 [Acinetobacter sp. SwsAc4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005160153.1 86016 86715 + 232PF08856DUF1826Protein of unknown function (DUF1826)5.50E-07
WP_005160150.1 87562 86719 - 280PF14088DUF4268Domain of unknown function (DUF4268)1.00E-21
WP_005160149.1 87696 88497 + 267INFERRED GENE---
WP_005160147.1 89040 88548 - 163PF01613Flavin_ReductFlavin reductase like domain2.60E-35
WP_005160145.1 90198 89169 - 342PF01717Meth_synt_2Cobalamin-independent synthase, Catalytic domain2.10E-37
WP_178882664.1 91221 90228 - 330PF08908MesXPutative oxygenase MesX9.20E-171
WP_218647840.1 93696 91608 - 695PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.50E-35
1.60E-09
WP_005046850.1 93906 93978 + 24INFERRED GENE---
WP_005160139.1 96253 94048 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.60E-76
3.70E-72
1.30E-08
WP_005160135.1 97251 96555 - 231PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
2.90E-16
2.80E-15
WP_005160132.1 100868 97262 - 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
1.30E-89
2.30E-63
8.00E-44
2.10E-39
4.30E-36
WP_005160128.1 102710 100883 - 608PF01425AmidaseAmidase1.90E-93
WP_076612260.1 102946 103191 + 81INFERRED GENE---
WP_004647755.1 103248 103551 + 101INFERRED GENE---
WP_005160127.1 104158 103573 - 194NO PFAM MATCH---
WP_005160126.1 105672 104802 - 289PF00753Lactamase_BMetallo-beta-lactamase superfamily4.50E-16
WP_005160125.1 106094 105683 - 136PF20398
PF04143
DUF6691
Sulf_transp
Family of unknown function (DUF6691)
Sulphur transport
1.20E-41
1.50E-04

Results for WP_005153036.1 [Acinetobacter sp. NIPH 2024] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_241286210.1 285797 284771 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.60E-32
1.50E-13
1.50E-06
WP_005153028.1 285912 287445 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.10E-23
4.70E-17
1.80E-13
2.00E-10
2.70E-08
WP_005153029.1 287445 288288 + 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
5.30E-48
2.30E-34
2.30E-10
WP_005153031.1 288546 291033 + 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
9.40E-58
8.40E-46
2.50E-36
1.00E-10
8.60E-06
WP_005153032.1 291044 291503 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
4.90E-22
2.90E-18
9.20E-16
WP_005153033.1 291792 291603 - 62PF00403HMAHeavy-metal-associated domain6.90E-11
WP_005153034.1 292235 291893 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain2.40E-11
WP_005153035.1 292642 292330 - 103PF03713DUF305Domain of unknown function (DUF305)8.70E-15
WP_005153036.1 295126 292921 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-75
1.20E-72
1.70E-08
WP_004806903.1 295371 295545 + 58INFERRED GENE---
WP_005153038.1 295673 296033 + 119PF12840
PF01022
PF13412
PF01047
PF17782
HTH_20
HTH_5
HTH_24
MarR
DprA_WH
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
MarR family
DprA winged helix domain
4.20E-14
5.90E-08
2.00E-04
4.90E-04
8.70E-04
WP_005153041.1 296010 296484 + 157PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein3.10E-30
WP_005153047.1 297720 296559 - 386PF13527
PF00583
Acetyltransf_9
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
6.00E-05
9.40E-04
WP_005153049.1 299054 297719 - 444PF02321OEPOuter membrane efflux protein2.60E-46
WP_005153051.1 300637 299050 - 528PF03321GH3GH3 auxin-responsive promoter3.10E-81
WP_005153053.1 301455 300633 - 273NO PFAM MATCH---
WP_005153055.1 303153 301605 - 515PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
3.10E-41
3.10E-05

Results for WP_005216293.1 [Acinetobacter sp. ANC 3862] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005216271.1 1038322 1038736 + 137PF13411
PF00376
PF09278
MerR_1
MerR
MerR-DNA-bind
MerR HTH family regulatory protein
MerR family regulatory protein
MerR, DNA binding
1.90E-18
2.50E-14
2.00E-11
WP_005216273.1 1038869 1039778 + 302PF12146
PF00561
PF02129
PF12697
PF20434
Hydrolase_4
Abhydrolase_1
Peptidase_S15
Abhydrolase_6
BD-FAE
Serine aminopeptidase, S33
alpha/beta hydrolase fold
X-Pro dipeptidyl-peptidase (S15 family)
Alpha/beta hydrolase family
BD-FAE
3.50E-16
8.70E-13
5.50E-11
1.70E-09
1.80E-09
WP_005216281.1 1039791 1040625 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
7.40E-47
1.60E-37
3.40E-12
WP_042862392.1 1041631 1040632 - 332PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.00E-28
1.20E-17
1.30E-07
WP_005216285.1 1041859 1042666 + 268PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
9.90E-10
7.20E-05
WP_005216287.1 1042859 1043912 + 350PF06314ADCAcetoacetate decarboxylase (ADC)3.80E-07
WP_005216288.1 1045248 1044180 - 355PF03435
PF13460
Sacchrp_dh_NADP
NAD_binding_10
Saccharopine dehydrogenase NADP binding domain
NAD(P)H-binding
1.20E-12
1.80E-07
WP_005216290.1 1046499 1045260 - 412PF00724
PF00977
PF01207
Oxidored_FMN
His_biosynth
Dus
NADH:flavin oxidoreductase / NADH oxidase family
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
3.00E-56
6.10E-06
5.40E-04
WP_005216293.1 1048987 1046782 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-75
2.80E-72
1.10E-08
WP_005216294.1 1050373 1049206 - 388NO PFAM MATCH---
WP_005216295.1 1051704 1050372 - 443PF02321OEPOuter membrane efflux protein2.50E-43
WP_005216297.1 1053287 1051700 - 528PF03321GH3GH3 auxin-responsive promoter1.00E-74
WP_171066586.1 1054072 1053283 - 262NO PFAM MATCH---
WP_005216300.1 1055807 1054259 - 515PF07690MFS_1Major Facilitator Superfamily5.50E-42
WP_005216301.1 1056894 1055832 - 353PF13437
PF16576
PF13533
PF00529
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
Biotin-requiring enzyme
6.40E-21
5.50E-17
1.20E-13
3.00E-09
6.10E-04
WP_005216305.1 1057602 1058457 + 284PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
4.60E-30
1.50E-10
WP_005216307.1 1059548 1058513 - 344PF02558
PF08546
PF01210
PF03807
ApbA
ApbA_C
NAD_Gly3P_dh_N
F420_oxidored
Ketopantoate reductase PanE/ApbA
Ketopantoate reductase PanE/ApbA C terminal
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NADP oxidoreductase coenzyme F420-dependent
1.30E-33
7.70E-22
5.00E-07
1.50E-06

Results for WP_005170892.1 [Acinetobacter sp. 18QD2AZ41W] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_159515759.1 107275 109006 + 576PF00069
PF07714
PF13672
PF00481
PF07228
Pkinase
PK_Tyr_Ser-Thr
PP2C_2
PP2C
SpoIIE
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Protein phosphatase 2C
Protein phosphatase 2C
Stage II sporulation protein E (SpoIIE)
6.30E-32
1.40E-19
1.30E-16
1.20E-07
2.60E-07
WP_159515760.1 109699 111859 + 719PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-28
1.80E-11
WP_100328614.1 112543 111934 - 202PF01914MarCMarC family integral membrane protein7.70E-16
WP_005170883.1 114610 112573 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.30E-176
WP_074382768.1 114870 115458 + 195PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
8.00E-28
1.40E-12
WP_159515761.1 115472 116948 + 491PF00171AldedhAldehyde dehydrogenase family5.10E-173
WP_159515762.1 116963 118631 + 555PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
1.10E-96
1.10E-40
WP_159515763.1 118778 119549 + 256NO PFAM MATCH---
WP_005170892.1 119912 122111 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.30E-75
1.10E-73
7.50E-09
WP_159515764.1 124124 122411 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.10E-50
2.60E-07
1.10E-06
2.60E-06
2.80E-06
WP_005170895.1 125181 124344 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
1.00E-16
2.00E-12
4.80E-05
WP_074383164.1 125661 126816 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
2.80E-47
4.40E-32
4.20E-29
3.80E-25
WP_159515765.1 126847 128047 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-35
1.10E-27
7.40E-20
3.50E-04
WP_005170902.1 128298 129579 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
1.60E-59
5.60E-29
5.50E-06
5.80E-05
WP_005170906.1 129620 130292 + 223PF01144CoA_transCoenzyme A transferase1.70E-65
WP_005170908.1 130291 130945 + 217PF01144CoA_transCoenzyme A transferase2.60E-31
WP_076611877.1 131126 131875 + 249INFERRED GENE---

Results for WP_005188307.1 [Acinetobacter sp. ANC 4105] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005188289.1 588962 589784 + 273NO PFAM MATCH---
WP_005188291.1 589780 591367 + 528PF03321GH3GH3 auxin-responsive promoter2.90E-80
WP_005188294.1 591363 592698 + 444PF02321OEPOuter membrane efflux protein8.20E-47
WP_005188297.1 592697 593864 + 388NO PFAM MATCH---
WP_005188300.1 594408 593937 - 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.30E-30
WP_004653570.1 594745 594385 - 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
1.20E-14
6.00E-08
4.00E-05
5.40E-05
WP_005188303.1 595731 594831 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.40E-45
5.30E-04
WP_032864494.1 595820 596693 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.80E-37
5.70E-18
WP_005188307.1 596940 599145 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.60E-76
6.50E-72
1.50E-08
WP_005188315.1 599426 599738 + 103PF03713DUF305Domain of unknown function (DUF305)1.00E-14
WP_005188318.1 599845 600187 + 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain5.20E-09
WP_004653564.1 600292 600481 + 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005188321.1 601040 600581 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
1.40E-20
3.50E-17
4.20E-16
WP_005188324.1 603538 601051 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.90E-57
8.80E-45
1.80E-36
7.10E-10
5.10E-06
WP_005188326.1 605248 603715 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
4.90E-24
1.20E-16
1.30E-11
4.50E-10
9.60E-09
WP_005188328.1 605363 606389 + 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.50E-31
3.70E-12
3.30E-05
WP_005188331.1 606492 607206 + 237PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
2.20E-16
1.00E-04
4.80E-04

Results for WP_005196890.1 [Acinetobacter sp. NIPH 298] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005196873.1 1155117 1155993 + 291PF01965DJ-1_PfpIDJ-1/PfpI family8.60E-09
WP_004671216.1 1156990 1156114 - 291PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
4.00E-30
2.00E-09
WP_005196874.1 1157667 1158735 + 355PF13437
PF16576
PF13533
PF00529
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
Biotin-requiring enzyme
7.80E-19
7.20E-16
1.70E-13
4.70E-08
2.00E-04
WP_005196875.1 1158759 1160307 + 515PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
8.30E-42
9.10E-06
WP_005196878.1 1160454 1161276 + 273NO PFAM MATCH---
WP_005196883.1 1161272 1162859 + 528PF03321GH3GH3 auxin-responsive promoter3.40E-77
WP_051065080.1 1162855 1164199 + 447PF02321OEPOuter membrane efflux protein6.70E-47
WP_005196888.1 1164195 1165368 + 390NO PFAM MATCH---
WP_005196890.1 1165670 1167872 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.10E-75
2.60E-73
1.70E-08
WP_005196892.1 1168283 1169357 + 357PF04909Amidohydro_2Amidohydrolase6.80E-19
WP_005196895.1 1169373 1170204 + 276PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
9.50E-48
2.20E-36
4.30E-13
WP_228128683.1 1170897 1170279 - 205PF01810LysELysE type translocator9.90E-17
WP_005196898.1 1171048 1171528 + 159PF01037
PF13412
PF13404
AsnC_trans_reg
HTH_24
HTH_AsnC-type
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
8.00E-21
2.30E-17
9.60E-17
WP_228128684.1 1171793 1172537 + 247PF09347DUF1989Domain of unknown function (DUF1989)2.90E-42
WP_005196902.1 1172554 1173208 + 217PF09347DUF1989Domain of unknown function (DUF1989)4.10E-62
WP_005196904.1 1173211 1176817 + 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
3.10E-88
1.20E-65
3.60E-49
4.50E-46
1.30E-32
WP_005196906.1 1179642 1176864 - 925PF02463SMC_NRecF/RecN/SMC N terminal domain1.90E-06

Results for WP_005222092.1 [Acinetobacter sp. CIP 101934] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005222082.1 1680653 1680512 - 46NO PFAM MATCH---
WP_005222084.1 1681029 1681917 + 295PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
7.00E-27
3.50E-13
5.40E-06
WP_005222087.1 1681883 1683314 + 476PF00982Glyco_transf_20Glycosyltransferase family 203.40E-94
WP_034434010.1 1684578 1683345 - 410PF07690MFS_1Major Facilitator Superfamily8.40E-27
WP_004894797.1 1685511 1684788 - 240PF00535
PF13641
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
2.50E-11
1.50E-08
1.40E-04
WP_005222089.1 1686116 1685507 - 202PF05401
PF13649
PF08241
PF13489
PF08242
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.30E-14
3.60E-11
5.30E-10
2.80E-09
1.40E-08
WP_005222090.1 1686891 1686096 - 264PF02585PIG-LGlcNAc-PI de-N-acetylase2.20E-24
WP_005222091.1 1687877 1686878 - 332PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain5.60E-04
WP_005222092.1 1690321 1688119 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
7.90E-75
5.40E-72
9.40E-09
WP_005222093.1 1691426 1690655 - 256NO PFAM MATCH---
WP_005222094.1 1693211 1691555 - 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
8.40E-96
1.30E-41
5.60E-04
WP_005222095.1 1694698 1693222 - 491PF00171AldedhAldehyde dehydrogenase family3.00E-174
WP_005222098.1 1695300 1694694 - 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
6.10E-30
2.50E-11
YP_004994476.1 1695556 1697607 + 683INFERRED GENE---
WP_004894827.1 1697635 1698244 + 202PF01914MarCMarC family integral membrane protein1.80E-14
WP_004894830.1 1698456 1698252 - 67NO PFAM MATCH---
WP_004809385.1 1699560 1698546 - 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.90E-17
5.00E-04

Results for WP_005251812.1 [Acinetobacter sp. CIP 102136] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005251802.1 958141 955561 - 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
7.40E-74
3.30E-39
2.60E-31
3.40E-24
4.70E-18
WP_005251804.1 959007 958347 - 219PF01144CoA_transCoenzyme A transferase5.30E-31
WP_005251805.1 959678 959006 - 223PF01144CoA_transCoenzyme A transferase4.90E-65
WP_004646972.1 960999 959718 - 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_005251807.1 962454 961254 - 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
6.50E-35
1.10E-27
3.30E-20
3.40E-04
WP_004730987.1 963640 962485 - 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_004280319.1 964143 964980 + 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_005251810.1 965203 966916 + 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.10E-50
2.20E-07
5.80E-07
4.10E-06
9.90E-06
WP_005251812.1 969458 967256 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
3.40E-73
8.80E-09
WP_005251813.1 970570 969799 - 256NO PFAM MATCH---
WP_005251817.1 972355 970699 - 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
5.30E-96
1.30E-41
7.80E-04
WP_005251819.1 973841 972365 - 491PF00171AldedhAldehyde dehydrogenase family3.30E-175
WP_005251820.1 974441 973862 - 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.50E-29
1.30E-11
WP_005251821.1 974711 976748 + 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.80E-175
WP_004280329.1 976776 977385 + 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_005251822.1 979614 977448 - 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
5.80E-26
1.70E-11
WP_004646984.1 981033 980115 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.90E-36
1.50E-13

Results for WP_005230574.1 [Acinetobacter sp. NIPH 1847] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005230562.1 1358282 1357262 - 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
7.20E-31
3.90E-13
1.40E-08
WP_005230564.1 1358396 1359929 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
4.80E-22
6.60E-16
1.50E-11
1.00E-09
3.30E-08
WP_005230566.1 1359929 1360772 + 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.70E-47
1.70E-33
1.70E-10
WP_005230568.1 1361081 1363568 + 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
5.40E-59
1.90E-45
3.90E-36
8.10E-10
6.80E-06
WP_005230570.1 1363579 1364038 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
4.90E-21
3.70E-18
4.10E-16
WP_005230571.1 1364327 1364138 - 62PF00403HMAHeavy-metal-associated domain4.10E-12
WP_005230572.1 1364774 1364432 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain2.20E-09
WP_005230573.1 1365192 1364880 - 103PF03713DUF305Domain of unknown function (DUF305)1.80E-14
WP_005230574.1 1367676 1365471 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.50E-75
1.50E-71
1.50E-08
WP_005230575.1 1368796 1367923 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.10E-37
1.10E-17
WP_032880457.1 1368885 1369785 + 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
5.20E-46
1.10E-04
WP_005230578.1 1369870 1370230 + 119PF12840
PF01022
PF13463
PF13412
PF01047
HTH_20
HTH_5
HTH_27
HTH_24
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
9.40E-15
1.60E-07
1.10E-04
2.00E-04
5.10E-04
WP_005230580.1 1370207 1370678 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.50E-30
WP_005230582.1 1371904 1370740 - 387NO PFAM MATCH---
WP_005230584.1 1373238 1371900 - 445PF02321OEPOuter membrane efflux protein4.00E-43
WP_005230586.1 1374821 1373234 - 528PF03321GH3GH3 auxin-responsive promoter7.20E-82
WP_171067738.1 1375606 1374817 - 262NO PFAM MATCH---

Results for WP_005235715.1 [Acinetobacter variabilis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005235702.1 555166 556432 + 421PF19577DcaPDcaP outer membrane protein5.00E-54
WP_005235704.1 556449 557649 + 399PF07690MFS_1Major Facilitator Superfamily2.50E-28
WP_005235706.1 558849 558174 - 224PF01144CoA_transCoenzyme A transferase1.10E-31
WP_005235708.1 559517 558848 - 222PF01144CoA_transCoenzyme A transferase1.50E-65
WP_005235709.1 560848 559567 - 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
1.80E-60
2.90E-26
6.70E-06
2.90E-04
WP_005235711.1 562258 561058 - 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.40E-35
1.20E-27
2.10E-20
1.70E-04
WP_034580970.1 563445 562290 - 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
4.90E-48
5.30E-32
3.30E-29
1.70E-25
WP_004785687.1 564013 564850 + 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
6.20E-12
1.40E-04
WP_005235715.1 567207 565008 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.10E-75
2.90E-73
6.80E-09
WP_005235718.1 568333 567562 - 256NO PFAM MATCH---
WP_005235719.1 570116 568460 - 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
4.60E-97
1.80E-41
WP_005235721.1 571602 570126 - 491PF00171AldedhAldehyde dehydrogenase family3.10E-173
WP_005235723.1 572202 571623 - 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
8.40E-29
1.20E-11
WP_004785675.1 572472 574509 + 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.40E-174
WP_005235725.1 574537 575146 + 202PF01914MarCMarC family integral membrane protein7.40E-14
WP_005235727.1 577379 575213 - 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
3.80E-26
3.10E-11
WP_164071339.1 578058 577857 - 66NO PFAM MATCH---

Results for WP_004730992.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004730980.1 3136271 3133691 - 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
7.70E-74
1.80E-39
2.30E-31
3.50E-24
8.20E-18
WP_004730982.1 3137137 3136477 - 219PF01144CoA_transCoenzyme A transferase2.70E-31
WP_004730985.1 3137808 3137136 - 223PF01144CoA_transCoenzyme A transferase8.80E-65
WP_004646972.1 3139129 3137848 - 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_004646973.1 3140583 3139383 - 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004730987.1 3141769 3140614 - 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_004280319.1 3142271 3143108 + 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_222112174.1 3143335 3145048 + 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.00E-50
2.80E-07
9.00E-07
2.60E-06
5.00E-06
WP_004730992.1 3147542 3145340 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
3.40E-73
8.80E-09
WP_085064590.1 3148654 3147883 - 256NO PFAM MATCH---
WP_004730996.1 3150437 3148781 - 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.20E-95
1.30E-41
7.70E-04
WP_085064589.1 3151924 3150448 - 491PF00171AldedhAldehyde dehydrogenase family9.50E-175
WP_004731001.1 3152524 3151945 - 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_004731003.1 3152794 3154831 + 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-175
WP_004280329.1 3154859 3155468 + 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_004731005.1 3157697 3155531 - 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.70E-28
2.30E-11
WP_004731007.1 3159115 3158197 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14

Results for WP_005241662.1 [Acinetobacter colistiniresistens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004653555.1 2748175 2748859 + 227PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
4.10E-26
1.30E-23
WP_005241655.1 2748848 2750231 + 460PF02518
PF00672
PF00512
PF14501
HATPase_c
HAMP
HisKA
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
His Kinase A (phospho-acceptor) domain
GHKL domain
1.70E-10
1.20E-09
7.10E-09
3.70E-06
WP_107114716.1 2751491 2750271 - 406PF00665
PF13276
PF13683
PF01527
PF13333
rve
HTH_21
rve_3
HTH_Tnp_1
rve_2
Integrase core domain
HTH-like domain
Integrase core domain
Transposase
Integrase core domain
6.00E-20
9.30E-19
5.80E-13
2.60E-07
1.10E-05
WP_005241657.1 2751754 2751604 - 49NO PFAM MATCH---
WP_257063754.1 2752118 2753651 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.90E-24
9.00E-18
4.30E-14
3.70E-11
4.60E-09
WP_257063755.1 2753833 2756320 + 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.00E-57
1.40E-46
7.90E-36
8.80E-10
1.00E-05
WP_005241660.1 2756331 2756790 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
5.20E-21
6.50E-18
5.80E-16
WP_043970688.1 2757070 2756881 - 62PF00403HMAHeavy-metal-associated domain2.20E-11
WP_005241662.1 2759438 2757233 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.40E-75
5.70E-72
1.80E-08
WP_257063757.1 2760569 2759696 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.00E-37
1.90E-17
WP_005275295.1 2760585 2760855 + 90INFERRED GENE---
WP_257063758.1 2761707 2761002 - 234PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
3.00E-16
3.00E-14
WP_257063759.1 2765319 2761713 - 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
4.20E-90
9.90E-64
3.90E-44
2.70E-40
1.80E-36
WP_257063760.1 2767164 2765337 - 608PF01425AmidaseAmidase1.80E-92
WP_043970628.1 2767769 2767412 - 118PF00126HTH_1Bacterial regulatory helix-turn-helix protein, lysR family9.00E-12
WP_026040171.1 2768937 2767827 - 369PF08240
PF00107
PF13602
PF16912
ADH_N
ADH_zinc_N
ADH_zinc_N_2
Glu_dehyd_C
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
2.00E-25
2.50E-25
4.60E-06
2.60E-05
WP_043970625.1 2769263 2768987 - 91PF02583Trns_repr_metalMetal-sensitive transcriptional repressor2.90E-23

Results for WP_005246318.1 [Acinetobacter sp. CIP 51.11] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005246312.1 147628 148546 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-35
3.70E-14
WP_005246313.1 149047 151213 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.30E-26
1.60E-11
WP_004280329.1 151885 151276 - 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_005246314.1 153950 151913 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter3.00E-175
WP_004731001.1 154220 154799 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_005246315.1 154820 156296 + 491PF00171AldedhAldehyde dehydrogenase family7.60E-175
WP_005246316.1 156306 157962 + 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
3.40E-96
1.30E-41
WP_005246317.1 158091 158862 + 256NO PFAM MATCH---
WP_005246318.1 159203 161405 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.10E-75
9.00E-73
8.70E-09
WP_005246319.1 163376 161663 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.60E-50
2.40E-07
8.00E-07
2.80E-06
5.30E-06
WP_004280319.1 164438 163601 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_004730987.1 164942 166097 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_005246320.1 166128 167328 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-35
1.10E-27
1.00E-19
3.50E-04
WP_005246321.1 167583 168864 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
6.30E-60
1.60E-27
9.10E-06
3.00E-04
WP_005246322.1 168904 169576 + 223PF01144CoA_transCoenzyme A transferase6.60E-66
WP_005100324.1 169575 170235 + 219PF01144CoA_transCoenzyme A transferase2.50E-31
WP_005246324.1 170441 173021 + 859PF00563
PF00990
PF13426
PF00989
PF08447
EAL
GGDEF
PAS_9
PAS
PAS_3
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
1.10E-73
3.20E-39
2.10E-31
3.50E-24
7.40E-18

Results for WP_005275330.1 [Acinetobacter colistiniresistens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005275310.1 1219453 1220275 + 273NO PFAM MATCH---
WP_005275313.1 1220271 1221858 + 528PF03321GH3GH3 auxin-responsive promoter4.70E-81
WP_005275318.1 1221854 1223168 + 437PF02321OEPOuter membrane efflux protein1.20E-45
WP_005275320.1 1223167 1224334 + 388NO PFAM MATCH---
WP_005275322.1 1224874 1224403 - 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein6.20E-31
WP_005241666.1 1225211 1224851 - 119PF12840
PF01022
PF13412
PF13463
PF01047
HTH_20
HTH_5
HTH_24
HTH_27
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
Winged helix DNA-binding domain
MarR family
1.20E-15
2.20E-09
2.60E-06
1.80E-04
9.70E-04
WP_005275325.1 1226198 1225304 - 297PF00892EamAEamA-like transporter family1.10E-49
WP_005275327.1 1226287 1227160 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.80E-37
2.10E-17
WP_005275330.1 1227418 1229623 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.30E-75
7.90E-72
1.90E-08
WP_005241661.1 1229786 1229975 + 62PF00403HMAHeavy-metal-associated domain2.00E-11
WP_005275332.1 1230525 1230066 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
5.20E-21
1.20E-17
3.40E-16
WP_005275334.1 1233023 1230536 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.80E-57
2.60E-46
7.60E-36
8.30E-10
7.00E-06
WP_005275336.1 1234738 1233205 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
7.00E-24
2.60E-17
2.60E-13
3.60E-11
5.00E-09
WP_005275340.1 1234853 1235873 + 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.50E-30
4.10E-11
1.10E-06
WP_005275343.1 1235994 1236708 + 237PF00196
PF04545
GerE
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.10E-18
1.00E-04
WP_005275346.1 1236794 1238258 + 487PF01425AmidaseAmidase4.90E-90
WP_005275349.1 1238437 1239469 + 343PF04389
PF01546
PF05343
PF16254
Peptidase_M28
Peptidase_M20
Peptidase_M42
DUF4910
Peptidase family M28
Peptidase family M20/M25/M40
M42 glutamyl aminopeptidase
Domain of unknown function (DUF4910)
9.80E-43
3.30E-11
6.30E-08
4.60E-04

Results for WP_005257760.1 [Acinetobacter vivianii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005257750.1 504054 502590 - 487PF01425AmidaseAmidase1.10E-86
WP_005257752.1 504854 504140 - 237PF00196GerEBacterial regulatory proteins, luxR family2.70E-17
WP_032863912.1 506009 504983 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
6.10E-34
1.80E-13
5.30E-07
WP_005257755.1 506122 507655 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.60E-23
2.30E-17
8.30E-13
4.60E-10
7.40E-09
WP_005257757.1 507655 508498 + 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
6.60E-47
9.80E-33
1.20E-10
WP_005257758.1 508816 511300 + 827PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.00E-58
2.10E-45
2.00E-34
6.50E-10
1.00E-05
WP_005257759.1 511311 511770 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
6.40E-22
1.90E-18
4.00E-16
WP_004772280.1 512060 511871 - 62PF00403HMAHeavy-metal-associated domain3.40E-11
WP_005257760.1 514425 512220 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.30E-75
5.40E-73
1.60E-08
WP_005257761.1 515549 514676 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.50E-33
2.00E-17
WP_005257762.1 515637 516531 + 297PF00892EamAEamA-like transporter family5.20E-47
WP_005257764.1 516623 516983 + 119PF12840
PF01022
PF13412
PF01047
PF17782
HTH_20
HTH_5
HTH_24
MarR
DprA_WH
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
MarR family
DprA winged helix domain
1.50E-14
1.60E-07
2.00E-04
5.30E-04
8.80E-04
WP_005257765.1 516960 517434 + 157PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein4.30E-30
WP_005257767.1 518665 517504 - 386PF13527
PF00583
Acetyltransf_9
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
2.40E-04
9.60E-04
WP_005257769.1 519999 518661 - 445PF02321OEPOuter membrane efflux protein1.30E-45
WP_005257771.1 521582 519995 - 528PF03321GH3GH3 auxin-responsive promoter3.90E-81
WP_004772291.1 522400 521578 - 273NO PFAM MATCH---

Results for WP_005266383.1 [Acinetobacter sp. YH12226] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_180087000.1 89182 90100 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-35
4.00E-14
WP_180087001.1 90600 92766 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.30E-27
2.50E-11
WP_004646981.1 93437 92828 - 202PF01914MarCMarC family integral membrane protein9.60E-14
WP_004280327.1 95502 93465 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.50E-175
WP_004731001.1 95771 96350 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_121980144.1 96371 97847 + 491PF00171AldedhAldehyde dehydrogenase family2.10E-174
WP_005246316.1 97857 99513 + 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
3.40E-96
1.30E-41
WP_005106927.1 99642 100413 + 256NO PFAM MATCH---
WP_005266383.1 100747 102949 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-74
3.80E-73
9.30E-09
WP_180087002.1 104920 103207 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.80E-50
2.40E-07
7.50E-07
2.80E-06
5.50E-06
WP_004280319.1 105983 105146 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_004730987.1 106487 107642 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_005246320.1 107673 108873 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-35
1.10E-27
1.00E-19
3.50E-04
WP_004646972.1 109128 110409 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_004730985.1 110449 111121 + 223PF01144CoA_transCoenzyme A transferase8.80E-65
WP_180087003.1 111120 111780 + 219PF01144CoA_transCoenzyme A transferase3.80E-31
WP_180087004.1 111986 114566 + 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
1.10E-73
1.90E-39
2.10E-30
1.50E-23
2.80E-18

Results for WP_005285924.1 [Acinetobacter courvalinii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_171067894.1 1127863 1128652 + 262NO PFAM MATCH---
WP_005285939.1 1128648 1130235 + 528PF03321GH3GH3 auxin-responsive promoter1.20E-80
WP_005285937.1 1130231 1131569 + 445PF02321OEPOuter membrane efflux protein2.10E-43
WP_005285934.1 1131565 1132729 + 387NO PFAM MATCH---
WP_005230580.1 1132790 1133261 + 157INFERRED GENE---
WP_005285929.1 1133598 1133238 - 119PF12840
PF01022
PF13463
PF13412
PF01047
HTH_20
HTH_5
HTH_27
HTH_24
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
2.50E-14
1.60E-07
1.00E-04
2.00E-04
5.10E-04
WP_032883161.1 1134583 1133683 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
3.30E-50
1.50E-06
WP_005285926.1 1134672 1135545 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-37
1.10E-16
WP_005285924.1 1135792 1137997 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-75
3.70E-72
1.70E-08
WP_004653564.1 1138161 1138350 + 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005285922.1 1138907 1138448 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
5.60E-21
3.90E-18
4.10E-16
WP_005285920.1 1141405 1138918 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.10E-58
1.10E-44
1.50E-36
3.00E-09
1.90E-05
WP_005285918.1 1142557 1141714 - 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.10E-48
4.00E-34
1.10E-10
WP_005285916.1 1144090 1142557 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.70E-21
1.10E-16
4.10E-13
1.00E-10
1.50E-08
WP_005285915.1 1144204 1145224 + 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-33
1.60E-12
1.30E-06
WP_005285913.1 1145347 1146079 + 243PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
3.40E-18
1.10E-05
2.40E-04
WP_005285911.1 1146147 1147611 + 487PF01425AmidaseAmidase2.80E-87

Results for WP_005294243.1 [Acinetobacter sp. NIPH 2100] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005294229.1 1988996 1987970 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.40E-31
6.10E-14
2.70E-07
WP_005294230.1 1989111 1990644 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
7.30E-24
2.10E-18
2.10E-13
1.40E-10
4.70E-09
WP_005294232.1 1990644 1991487 + 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.80E-48
9.90E-35
2.30E-10
WP_005294234.1 1991744 1994231 + 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.40E-56
1.30E-46
1.60E-36
7.40E-10
3.50E-06
WP_005294236.1 1994244 1994703 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
8.20E-22
3.20E-18
1.00E-15
WP_005294238.1 1994994 1994805 - 62PF00403HMAHeavy-metal-associated domain2.70E-11
WP_005294240.1 1995437 1995095 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain4.60E-10
WP_005294241.1 1995843 1995531 - 103PF03713DUF305Domain of unknown function (DUF305)8.60E-15
WP_005294243.1 1998327 1996122 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.70E-75
1.30E-72
1.80E-08
WP_005294244.1 1999445 1998572 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.10E-32
3.30E-17
WP_032863130.1 1999535 2000429 + 297PF00892EamAEamA-like transporter family1.60E-46
WP_005294248.1 2000521 2000881 + 119PF12840
PF01022
PF13412
PF01047
PF17782
HTH_20
HTH_5
HTH_24
MarR
DprA_WH
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
MarR family
DprA winged helix domain
4.20E-14
5.90E-08
2.00E-04
5.00E-04
8.40E-04
WP_005294250.1 2000858 2001332 + 157PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein4.30E-30
WP_005294252.1 2002571 2001404 - 388PF13527Acetyltransf_9Acetyltransferase (GNAT) domain2.30E-04
WP_005294254.1 2003905 2002570 - 444PF02321OEPOuter membrane efflux protein2.90E-46
WP_005294256.1 2005488 2003901 - 528PF03321GH3GH3 auxin-responsive promoter1.30E-79
WP_005294257.1 2006306 2005484 - 273NO PFAM MATCH---

Results for WP_005329061.1 [Acinetobacter sp. CIP 102143] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004681778.1 348028 347518 - 169PF04390LptELipopolysaccharide-assembly5.20E-04
WP_004681776.1 350701 348076 - 874PF13603
PF00133
PF09334
PF08264
PF01921
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1f
Leucyl-tRNA synthetase, Domain 2
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (M)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (K)
7.20E-73
4.40E-66
3.60E-28
1.40E-12
3.60E-04
WP_004681775.1 351188 350837 - 116PF13511DUF4124Domain of unknown function (DUF4124)5.50E-11
WP_004764151.1 351695 353423 + 575PF02776
PF02775
PF00205
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
1.60E-58
8.30E-49
1.90E-44
WP_004678407.1 353419 353911 + 163PF10369
PF13710
PF01842
ALS_ss_C
ACT_5
ACT
Small subunit of acetolactate synthase
ACT domain
ACT domain
1.90E-29
4.10E-17
3.80E-12
WP_004659026.1 354036 355053 + 338PF07991
PF01450
PF02826
PF03807
PF03446
IlvN
IlvC
2-Hacid_dh_C
F420_oxidored
NAD_binding_2
Acetohydroxy acid isomeroreductase, NADPH-binding domain
Acetohydroxy acid isomeroreductase, catalytic domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
4.20E-76
2.30E-58
5.90E-06
6.40E-05
2.20E-04
WP_005329058.1 355745 357809 + 687PF00563
PF00990
PF03707
EAL
GGDEF
MHYT
EAL domain
Diguanylate cyclase, GGDEF domain
Bacterial signalling protein N terminal repeat
6.10E-73
3.30E-41
6.20E-38
WP_010589466.1 357922 358840 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-34
6.40E-14
WP_005329061.1 359065 361264 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
2.80E-72
3.50E-08
WP_004739665.1 362580 362667 + 29INFERRED GENE---
WP_005329063.1 362746 364462 + 571PF02384
PF12161
N6_Mtase
HsdM_N
N-6 DNA Methylase
HsdM N-terminal domain
4.00E-113
9.80E-23
WP_004764146.1 364451 365885 + 477PF13749
PF04326
PF13412
PF01726
PF12802
HATPase_c_4
AlbA_2
HTH_24
LexA_DNA_bind
MarR_2
Putative ATP-dependent DNA helicase recG C-terminal
Putative DNA-binding domain
Winged helix-turn-helix DNA-binding
LexA DNA binding domain
MarR family
1.70E-23
9.00E-22
1.20E-09
5.20E-06
5.40E-06
WP_004764144.1 365905 367243 + 445PF01420Methylase_SType I restriction modification DNA specificity domain1.10E-28
WP_004681762.1 367235 368204 + 322PF07751Abi_2Abi-like protein1.60E-51
WP_004764142.1 368307 371427 + 1039PF11867
PF18766
PF04313
PF04851
DUF3387
SWI2_SNF2
HSDR_N
ResIII
Domain of unknown function (DUF3387)
SWI2/SNF2 ATPase
Type I restriction enzyme R protein N terminus (HSDR_N)
Type III restriction enzyme, res subunit
3.70E-117
4.00E-84
4.60E-43
8.10E-17
WP_004804437.1 371503 371756 + 84INFERRED GENE---
WP_004681760.1 371916 373509 + 530PF00009
PF16658
PF03144
PF01926
PF14492
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Elongation factor Tu GTP binding domain
Class II release factor RF3, C-terminal domain
Elongation factor Tu domain 2
50S ribosome-binding GTPase
Elongation Factor G, domain III
7.80E-50
6.60E-47
1.60E-07
1.20E-05
1.70E-04

Results for WP_005299328.1 [Acinetobacter genomosp. 33YU] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_077162597.1 211252 212086 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.20E-48
5.60E-41
8.50E-14
WP_077162598.1 212108 213632 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.70E-17
5.80E-14
4.10E-13
4.80E-10
5.30E-07
WP_077162599.1 213745 214621 + 291PF04072LCMLeucine carboxyl methyltransferase5.20E-38
WP_077162600.1 215643 214629 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-38
1.30E-13
2.40E-04
WP_077162601.1 215776 217264 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.20E-20
2.60E-16
2.60E-11
2.80E-11
1.60E-09
WP_077162602.1 217308 218163 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.60E-50
3.40E-36
2.50E-11
WP_077162603.1 218235 219129 + 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
2.80E-55
1.50E-11
7.30E-10
1.30E-05
7.10E-04
WP_077162604.1 219156 220827 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
2.30E-17
1.60E-09
2.50E-05
5.60E-05
WP_005299328.1 223091 220892 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.00E-74
1.30E-72
2.70E-08
WP_077162605.1 224623 223342 - 426PF03573OprDouter membrane porin, OprD family2.20E-105
WP_077162606.1 226001 224654 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.30E-47
1.70E-23
1.40E-08
WP_077162607.1 226372 228058 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
2.00E-77
1.00E-05
1.50E-05
WP_077162684.1 228083 229037 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.40E-67
WP_077162608.1 229049 230237 + 395PF03573OprDouter membrane porin, OprD family3.60E-34
WP_077162609.1 230470 231547 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
5.30E-54
9.20E-19
7.00E-06
WP_077162610.1 231559 232504 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.60E-12
8.10E-06
WP_077162611.1 233240 232547 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
8.10E-11

Results for WP_005212454.1 [Acinetobacter sp. NIPH 1867] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005212446.1 2922241 2921527 - 237PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.60E-16
1.10E-04
5.70E-04
WP_005212447.1 2923370 2922344 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.20E-31
2.40E-11
1.10E-04
WP_005212448.1 2923485 2925018 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.30E-24
1.20E-17
7.10E-13
2.00E-11
1.90E-09
WP_005212449.1 2925195 2927658 + 820PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.70E-57
5.60E-45
2.30E-36
1.20E-09
6.90E-06
WP_005212450.1 2927693 2928152 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
2.40E-21
3.20E-18
4.70E-16
WP_005212451.1 2928439 2928250 - 62PF00403HMAHeavy-metal-associated domain1.30E-12
WP_005212452.1 2928886 2928544 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain1.40E-09
WP_005212453.1 2929305 2928993 - 103PF03713DUF305Domain of unknown function (DUF305)1.10E-14
WP_005212454.1 2931790 2929585 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.90E-75
1.30E-71
2.00E-08
WP_032858035.1 2932909 2932036 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.50E-35
3.40E-18
WP_005212460.1 2932998 2933898 + 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.60E-46
1.10E-04
WP_004653570.1 2933984 2934344 + 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
1.20E-14
6.00E-08
4.00E-05
5.40E-05
WP_005212462.1 2934321 2934792 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.80E-30
WP_005212465.1 2936032 2934865 - 388NO PFAM MATCH---
WP_005212467.1 2937363 2936031 - 443PF02321OEPOuter membrane efflux protein1.40E-46
WP_005212468.1 2938946 2937359 - 528PF03321GH3GH3 auxin-responsive promoter2.00E-80
WP_005212470.1 2939764 2938942 - 273NO PFAM MATCH---

Results for WP_005203784.1 [Acinetobacter genomosp. 16BJ] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005203775.1 1284575 1283861 - 237PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
3.60E-16
7.70E-05
7.30E-04
WP_005203776.1 1285704 1284678 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.50E-30
1.90E-12
3.90E-06
WP_005203777.1 1285819 1287352 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.20E-24
1.30E-17
8.00E-13
2.00E-11
2.00E-09
WP_005203778.1 1287529 1290013 + 827PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
8.40E-57
1.80E-44
5.90E-34
8.10E-10
5.20E-06
WP_005203779.1 1290023 1290482 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
2.10E-21
6.80E-18
4.10E-16
WP_004653564.1 1290770 1290581 - 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005203780.1 1291217 1290875 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain9.60E-09
WP_005203782.1 1291636 1291324 - 103PF03713DUF305Domain of unknown function (DUF305)9.90E-16
WP_005203784.1 1294121 1291916 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.60E-76
2.50E-72
1.50E-08
WP_026057452.1 1295241 1294368 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.60E-18
WP_005203786.1 1295330 1296230 + 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
2.10E-46
3.40E-04
WP_005203788.1 1296316 1296676 + 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
3.60E-13
2.90E-07
3.30E-05
4.00E-05
WP_005188300.1 1296653 1297124 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.30E-30
WP_005203790.1 1298363 1297196 - 388NO PFAM MATCH---
WP_005203796.1 1299694 1298362 - 443PF02321OEPOuter membrane efflux protein6.50E-46
WP_005203798.1 1301277 1299690 - 528PF03321GH3GH3 auxin-responsive promoter1.90E-80
WP_005203800.1 1302095 1301273 - 273NO PFAM MATCH---

Results for WP_005313677.1 [Acinetobacter sp. ANC 5659] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005313691.1 112120 111406 - 237PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.70E-16
8.70E-05
5.60E-04
WP_005313688.1 113249 112223 - 341PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.80E-31
7.30E-13
4.80E-06
WP_005313686.1 113364 114897 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.40E-24
5.90E-17
4.40E-12
9.70E-10
8.30E-09
WP_005313684.1 115074 117561 + 828PF00122
PF00702
PF00403
PF08282
PF19803
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
DUF6286
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
Family of unknown function (DUF6286)
2.80E-57
3.70E-45
5.00E-36
3.20E-09
1.50E-05
WP_005313681.1 117572 118031 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
2.00E-21
6.60E-18
4.00E-16
WP_004653564.1 118319 118130 - 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005188318.1 118766 118424 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain5.20E-09
WP_005188315.1 119185 118873 - 103PF03713DUF305Domain of unknown function (DUF305)1.00E-14
WP_005313677.1 121669 119464 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.00E-76
2.50E-72
1.60E-08
WP_032859019.1 122789 121916 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-35
6.60E-18
WP_005313671.1 122878 123778 + 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.10E-45
2.90E-04
WP_004653570.1 123864 124224 + 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
1.20E-14
6.00E-08
4.00E-05
5.40E-05
WP_005188300.1 124201 124672 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.30E-30
WP_005203790.1 125911 124744 - 388NO PFAM MATCH---
WP_005203796.1 127242 125910 - 443PF02321OEPOuter membrane efflux protein6.50E-46
WP_005313658.1 128825 127238 - 528PF03321GH3GH3 auxin-responsive promoter2.30E-80
WP_005313655.1 129643 128821 - 273NO PFAM MATCH---

Results for WP_005361439.1 [Aeromonas diversa CDC 2478-85] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005358290.1 94859 93344 - 504PF11849
PF13487
PF01966
PF00072
DUF3369
HD_5
HD
Response_reg
Domain of unknown function (DUF3369)
HD domain
HD domain
Response regulator receiver domain
4.60E-33
2.20E-19
1.90E-18
5.20E-06
WP_005358287.1 95150 96818 + 555PF00015
PF17200
PF08269
PF00672
MCPsignal
sCache_2
dCache_2
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
Single Cache domain 2
Cache domain
HAMP domain
5.50E-44
5.90E-29
8.10E-28
3.70E-13
WP_043157980.1 96916 98143 + 408PF00480ROKROK family4.10E-47
WP_231552995.1 99194 98129 - 354PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
5.20E-14
2.20E-05
WP_005358282.1 99250 100030 + 259PF01875MemoMemo-like protein9.10E-36
WP_005361431.1 100007 100607 + 199PF01871AMMECR1AMMECR11.80E-38
WP_005361433.1 102936 100653 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.10E-203
1.90E-42
WP_005361436.1 103827 102978 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-74
WP_005361439.1 105953 104192 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.70E-79
4.40E-65
WP_043158179.1 106398 106080 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.10E-30
WP_005361446.1 106710 107826 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
6.10E-58
1.30E-22
WP_005361448.1 108507 107913 - 197PF01184Gpr1_Fun34_YaaHGPR1/FUN34/yaaH family1.90E-39
WP_005361451.1 111525 108690 - 944PF05359
PF05170
PF00691
DUF748
AsmA
OmpA
Domain of Unknown Function (DUF748)
AsmA family
OmpA family
6.60E-80
8.30E-06
6.10E-04
WP_005361454.1 112315 111553 - 253PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 39.50E-13
WP_005361457.1 112747 112351 - 131PF13411
PF09278
PF00376
MerR_1
MerR-DNA-bind
MerR
MerR HTH family regulatory protein
MerR, DNA binding
MerR family regulatory protein
2.50E-18
4.10E-16
2.90E-12
WP_005361460.1 113658 112743 - 304PF00682HMGL-likeHMGL-like1.10E-43
WP_043597287.1 115569 113658 - 636PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
6.90E-70
1.00E-42
3.20E-29
6.90E-17
6.50E-07

Results for WP_002611795.1 [[Clostridium] innocuum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038274740.1 13379 13670 + 96NO PFAM MATCH---
WP_002611780.1 14620 14296 - 107PF02772S-AdoMet_synt_MS-adenosylmethionine synthetase, central domain3.00E-26
MKA52_RS20555 14773 15283 + 170INFERRED GENE---
WP_002611782.1 16571 15794 - 258PF04326AlbA_2Putative DNA-binding domain8.00E-16
WP_002611783.1 18599 16988 - 536PF00005
PF00664
PF13304
PF02463
PF13555
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.10E-20
2.70E-18
3.00E-07
2.10E-06
3.20E-04
WP_002611784.1 19408 18595 - 270PF00881NitroreductaseNitroreductase family2.70E-15
WP_002611787.1 20619 19704 - 304NO PFAM MATCH---
WP_157419525.1 21680 20699 - 326PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-07
WP_002611795.1 22806 21825 - 326PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-08
WP_038274744.1 23447 22802 - 214NO PFAM MATCH---
WP_002611798.1 24273 23439 - 277NO PFAM MATCH---
WP_002611800.1 24604 24382 - 73NO PFAM MATCH---
WP_002611802.1 24724 26419 + 564PF13155
PF16403
Toprim_2
DUF5011
Toprim-like
Domain of unknown function (DUF5011)
2.60E-11
1.60E-04
WP_002611804.1 27310 28771 + 486PF00239ResolvaseResolvase, N terminal domain1.50E-19
WP_002610674.1 29045 29435 + 130INFERRED GENE---
WP_002611808.1 30338 29759 - 192PF09515
PF12822
Thia_YuaJ
ECF_trnsprt
Thiamine transporter protein (Thia_YuaJ)
ECF transporter, substrate-specific component
2.40E-26
8.70E-07
WP_002608216.1 32528 31664 - 287PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
4.00E-20
3.10E-17

Results for WP_010876618.1 [Methanothermobacter thermautotrophicus str. Delta H] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010876610.1 894049 893857 - 63PF04021Class_IIIsignalClass III signal peptide2.20E-05
WP_010876611.1 895004 894062 - 313PF00482T2SSFType II secretion system (T2SS), protein F6.10E-23
WP_143485766.1 896065 895078 - 328PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
5.60E-54
6.10E-06
WP_143485767.1 896590 896110 - 159NO PFAM MATCH---
WP_010876614.1 896706 896901 + 64NO PFAM MATCH---
WP_238374174.1 896915 897923 + 335PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
7.00E-116
1.40E-15
WP_010876616.1 897935 899033 + 365PF07568
PF00989
PF13188
PF02518
PF13426
HisKA_2
PAS
PAS_8
HATPase_c
PAS_9
Histidine kinase
PAS fold
PAS domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS domain
4.80E-31
4.60E-13
3.30E-10
3.00E-09
2.00E-08
WP_048061267.1 899214 899790 + 191PF02163Peptidase_M50Peptidase family M506.80E-08
WP_010876618.1 899831 900983 + 383PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-93
WP_013296171.1 901101 901751 + 216INFERRED GENE---
WP_010876621.1 901904 902921 + 338PF06508
PF01171
QueC
ATP_bind_3
Queuosine biosynthesis protein QueC
PP-loop family
1.40E-06
1.90E-04
WP_010876622.1 903420 903003 - 138NO PFAM MATCH---
WP_048060939.1 904258 903412 - 281PF00571CBSCBS domain5.30E-46
WP_010876624.1 904726 904294 - 143PF00582UspUniversal stress protein family7.30E-39
WP_048060940.1 905879 904730 - 382PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
2.60E-55
1.80E-07
WP_048060941.1 907336 906007 - 442PF18911
PF00801
PF07705
PKD_4
PKD
CARDB
PKD domain
PKD domain
CARDB
6.40E-20
4.30E-17
2.40E-09
WP_013296178.1 907404 910585 + 1060INFERRED GENE---

Results for WP_010869168.1 [Haemophilus influenzae Rd KW20] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005652999.1 1331904 1332078 + 57PF17320DUF5363Family of unknown function (DUF5363)1.20E-23
WP_005694314.1 1332179 1335620 + 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.40E-29
4.30E-26
2.30E-24
1.60E-20
3.10E-19
WP_005694316.1 1337073 1335672 - 466PF00595
PF13365
PF13180
PF17820
PF02163
PDZ
Trypsin_2
PDZ_2
PDZ_6
Peptidase_M50
PDZ domain
Trypsin-like peptidase domain
PDZ domain
PDZ domain
Peptidase family M50
1.20E-33
1.50E-32
9.20E-24
2.40E-22
2.50E-22
WP_005694317.1 1337266 1338157 + 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
2.30E-15
7.00E-12
WP_032828440.1 1338158 1339463 + 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
1.50E-12
6.10E-04
WP_010869167.1 1340431 1339750 - 226PF02698DUF218DUF218 domain4.10E-14
WP_005694320.1 1340588 1341665 + 358PF00561Abhydrolase_1alpha/beta hydrolase fold1.40E-53
WP_005694321.1 1344361 1341718 - 880PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
6.10E-149
2.60E-78
WP_010869168.1 1346707 1344943 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.00E-81
3.20E-61
WP_005694510.1 1347230 1346843 - 128NO PFAM MATCH---
WP_006995895.1 1347178 1347744 + 188INFERRED GENE---
WP_005646572.1 1347740 1348478 + 246INFERRED GENE---
WP_032828469.1 1348491 1349259 + 255PF00005
PF13304
PF02463
PF13175
PF13166
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_13
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
8.80E-31
1.30E-15
3.20E-10
4.70E-05
1.50E-04
WP_005694515.1 1349255 1350062 + 268PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.00E-10
7.60E-08
2.00E-06
7.40E-06
8.80E-06
WP_005694517.1 1350113 1350830 + 238PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.20E-14
5.90E-12
3.80E-07
WP_005694518.1 1351746 1350885 - 286PF03848
PF09313
PF13649
PF13489
PF08241
TehB
DUF1971
Methyltransf_25
Methyltransf_23
Methyltransf_11
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.70E-114
3.20E-32
8.10E-12
1.30E-09
1.40E-09
WP_005694519.1 1353907 1351858 - 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
2.20E-166
6.40E-24
7.00E-15
2.20E-12
1.00E-09

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003898850.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003898850.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011636221.1 [Shewanella frigidimarina NCIMB 400] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011636213.1 857438 856469 - 322PF08546
PF02558
ApbA_C
ApbA
Ketopantoate reductase PanE/ApbA C terminal
Ketopantoate reductase PanE/ApbA
1.40E-32
2.80E-23
WP_011636214.1 857801 857444 - 118PF04892VanZVanZ like family1.90E-09
WP_011636215.1 858139 858625 + 161PF04461DUF520Protein of unknown function (DUF520)7.20E-59
WP_011636216.1 859089 859476 + 128PF12614RRF_GIRibosome recycling factor6.50E-66
WP_011636217.1 860396 859820 - 191PF13505
PF01389
OMP_b-brl
OmpA_membrane
Outer membrane protein beta-barrel domain
OmpA-like transmembrane domain
2.00E-22
1.60E-14
WP_011636218.1 861222 861435 + 70PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
2.50E-31
6.30E-04
WP_011636219.1 861744 861975 + 76NO PFAM MATCH---
WP_011636220.1 862519 863536 + 338NO PFAM MATCH---
WP_011636221.1 864239 866426 + 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.20E-73
3.30E-70
2.80E-09
WP_011636222.1 868001 866513 - 495PF08757CotHCotH kinase protein5.20E-78
WP_011636223.1 868348 869752 + 467NO PFAM MATCH---
WP_011636224.1 869888 870137 + 82NO PFAM MATCH---
WP_011636225.1 871416 870213 - 400PF00909Ammonium_transpAmmonium Transporter Family1.20E-87
WP_011636226.1 871831 873001 + 389PF00108
PF02803
PF02801
Thiolase_N
Thiolase_C
Ketoacyl-synt_C
Thiolase, N-terminal domain
Thiolase, C-terminal domain
Beta-ketoacyl synthase, C-terminal domain
1.50E-12
1.10E-09
7.80E-06
WP_041412779.1 873709 873079 - 209PF03929PepSY_TMPepSY-associated TM region1.10E-10
WP_167526084.1 874103 873701 - 133NO PFAM MATCH---
WP_011636227.1 874695 875238 + 180NO PFAM MATCH---

Results for WP_002613718.1 [Stigmatella aurantiaca DW4/3-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013374805.1 2032877 2032643 - 77NO PFAM MATCH---
WP_002613702.1 2034993 2033229 - 587PF00664
PF00005
PF02463
PF13401
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA ATPase domain
6.10E-66
7.60E-39
9.30E-07
1.50E-05
2.10E-05
WP_002613699.1 2035137 2035986 + 282PF00248Aldo_ket_redAldo/keto reductase family1.10E-55
WP_013374806.1 2036856 2035989 - 288PF13175
PF13304
PF13476
PF11398
PF02463
AAA_15
AAA_21
AAA_23
DUF2813
SMC_N
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
Protein of unknown function (DUF2813)
RecF/RecN/SMC N terminal domain
1.00E-16
1.00E-14
2.40E-06
2.50E-06
3.10E-04
WP_002613727.1 2037138 2038587 + 482PF01425AmidaseAmidase3.10E-87
WP_148273297.1 2038657 2042689 + 1343PF00069
PF07714
PF13191
PF00211
PF17874
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Guanylate_cyc
TPR_MalT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
MalT-like TPR region
3.30E-50
1.20E-29
9.80E-24
9.40E-13
5.10E-10
WP_002613708.1 2042831 2043164 + 110PF02979NHase_alphaNitrile hydratase, alpha chain8.40E-05
WP_002613725.1 2044335 2043147 - 395PF04909Amidohydro_2Amidohydrolase5.30E-34
WP_002613718.1 2046557 2044346 - 736PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-96
WP_002613690.1 2046919 2046598 - 106PF01738DLHDienelactone hydrolase family1.20E-05
WP_002613687.1 2046913 2048725 + 603PF00041
PF13229
fn3
Beta_helix
Fibronectin type III domain
Right handed beta helix region
1.60E-05
4.50E-04
WP_002613706.1 2048773 2049865 + 363PF11199DUF2891Protein of unknown function (DUF2891)4.80E-140
WP_002613712.1 2050625 2049872 - 250PF02348
PF12804
CTP_transf_3
NTP_transf_3
Cytidylyltransferase
MobA-like NTP transferase domain
9.80E-44
8.50E-11
WP_013374809.1 2050718 2051846 + 375PF02350Epimerase_2UDP-N-acetylglucosamine 2-epimerase5.20E-105
WP_013374810.1 2053911 2051862 - 682PF02518
PF08447
PF13185
PF00512
PF08448
HATPase_c
PAS_3
GAF_2
HisKA
PAS_4
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
GAF domain
His Kinase A (phospho-acceptor) domain
PAS fold
1.20E-24
2.80E-20
6.00E-09
4.40E-08
1.50E-06
WP_002613717.1 2054042 2055080 + 345PF00849PseudoU_synth_2RNA pseudouridylate synthase8.00E-32
WP_002613700.1 2056528 2055085 - 480PF13537
PF13522
PF00156
PF13230
GATase_7
GATase_6
Pribosyltran
GATase_4
Glutamine amidotransferase domain
Glutamine amidotransferase domain
Phosphoribosyl transferase domain
Glutamine amidotransferases class-II
2.90E-21
3.10E-20
1.50E-07
1.00E-06

Results for WP_002612983.1 [Stigmatella aurantiaca DW4/3-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013376382.1 3048 3789 + 246PF12706
PF00753
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
5.70E-28
4.30E-04
WP_002612975.1 4897 3781 - 371PF00293NUDIXNUDIX domain2.80E-15
WP_002612981.1 6429 4893 - 511PF06689zf-C4_ClpXClpX C4-type zinc finger3.60E-09
WP_013376383.1 7736 6470 - 421PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.80E-85
3.90E-20
1.70E-16
9.60E-05
WP_013376384.1 8726 7796 - 309PF04055
PF16881
Radical_SAM
LIAS_N
Radical SAM superfamily
N-terminal domain of lipoyl synthase of Radical_SAM family
2.70E-13
1.60E-10
WP_002612986.1 10960 8911 - 682PF01244
PF04706
Peptidase_M19
Dickkopf_N
Membrane dipeptidase (Peptidase family M19)
Dickkopf N-terminal cysteine-rich region
3.10E-25
3.00E-04
WP_002612973.1 12510 11112 - 465PF07992
PF02852
PF00070
PF13738
PF12831
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
1.70E-62
4.20E-35
3.90E-20
4.30E-11
9.50E-10
WP_232293319.1 12585 13722 + 378NO PFAM MATCH---
WP_002612983.1 15216 13743 - 490PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-69
WP_002612942.1 16463 15263 - 399PF08241Methyltransf_11Methyltransferase domain5.60E-06
WP_232293320.1 17396 16496 - 299NO PFAM MATCH---
WP_232293321.1 18016 19195 + 392PF01757Acyl_transf_3Acyltransferase family8.30E-25
WP_232293322.1 19471 19249 - 73PF07382HC2Histone H1-like nucleoprotein HC22.20E-04
WP_002612952.1 19674 20007 + 110PF00893
PF00892
Multi_Drug_Res
EamA
Small Multidrug Resistance protein
EamA-like transporter family
3.20E-28
5.50E-04
WP_002612950.1 20851 20230 - 206PF01502
PF01503
PF03819
PRA-CH
PRA-PH
MazG
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase domain
3.20E-29
6.00E-14
7.30E-05
WP_002612980.1 21609 20847 - 253PF00977
PF03060
PF01207
PF05690
PF04309
His_biosynth
NMO
Dus
ThiG
G3P_antiterm
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
Thiazole biosynthesis protein ThiG
Glycerol-3-phosphate responsive antiterminator
3.20E-81
2.50E-07
1.60E-05
1.60E-05
1.70E-05
WP_013376387.1 22145 21608 - 178PF00475IGPDImidazoleglycerol-phosphate dehydratase4.70E-37

Results for WP_002611293.1 [Stigmatella aurantiaca DW4/3-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_232293186.1 26545 27850 + 434PF05270
PF04616
AbfB
Glyco_hydro_43
Alpha-L-arabinofuranosidase B (ABFB) domain
Glycosyl hydrolases family 43
1.50E-44
1.00E-12
WP_232293187.1 27876 29274 + 465PF04616
PF05270
Glyco_hydro_43
AbfB
Glycosyl hydrolases family 43
Alpha-L-arabinofuranosidase B (ABFB) domain
9.40E-65
2.50E-44
WP_002611302.1 29580 30213 + 210PF04264YceIYceI-like domain1.20E-20
WP_013374638.1 30260 30491 + 76NO PFAM MATCH---
WP_232293188.1 31351 32308 + 318PF08309LVIVDLVIVD repeat7.40E-18
WP_232293189.1 33212 32309 - 300PF16403DUF5011Domain of unknown function (DUF5011)5.50E-24
WP_002611320.1 38835 33561 - 1757PF13191
PF00069
PF02518
PF07714
PF01590
AAA_16
Pkinase
HATPase_c
PK_Tyr_Ser-Thr
GAF
AAA ATPase domain
Protein kinase domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Protein tyrosine and serine/threonine kinase
GAF domain
2.80E-44
5.20E-25
3.30E-21
3.30E-19
6.10E-14
WP_013374639.1 38968 39220 + 83NO PFAM MATCH---
WP_002611293.1 39238 40462 + 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-84
WP_081468151.1 40458 41808 + 449PF07812TfuATfuA-like protein3.30E-48
STIAU_RS48460 42212 42866 + 218INFERRED GENE---
WP_232293190.1 43361 42938 - 140PF07661MORN_2MORN repeat variant5.60E-14
WP_013374642.1 44281 43531 - 249NO PFAM MATCH---
WP_002611275.1 45026 44552 - 157PF00578
PF08534
PF13905
AhpC-TSA
Redoxin
Thioredoxin_8
AhpC/TSA family
Redoxin
Thioredoxin-like
6.00E-13
2.10E-05
1.10E-04
WP_002611322.1 45217 46363 + 381PF05787
PF07676
DUF839
PD40
Bacterial protein of unknown function (DUF839)
WD40-like Beta Propeller Repeat
1.50E-30
2.80E-06
WP_013374643.1 46379 47903 + 507PF02446Glyco_hydro_774-alpha-glucanotransferase6.70E-152
WP_002611332.1 48796 47875 - 306PF00294PfkBpfkB family carbohydrate kinase1.00E-24

Results for WP_011641181.1 [Syntrophomonas wolfei subsp. wolfei str. Goettingen G311] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011641173.1 2034154 2033638 - 171PF00731AIRCAIR carboxylase3.80E-67
WP_011641174.1 2035718 2034506 - 403PF12697
PF00561
PF01674
Abhydrolase_6
Abhydrolase_1
Lipase_2
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Lipase (class 2)
1.40E-07
1.40E-05
5.80E-05
WP_011641175.1 2035989 2035812 - 58NO PFAM MATCH---
WP_011641176.1 2036160 2036616 + 151PF02915
PF13668
PF11266
PF00210
Rubrerythrin
Ferritin_2
Ald_deCOase
Ferritin
Rubrerythrin
Ferritin-like domain
Long-chain fatty aldehyde decarbonylase
Ferritin-like domain
1.50E-16
4.80E-07
4.00E-05
2.40E-04
WP_011641177.1 2038354 2036821 - 510PF00958
PF00117
PF07722
PF02540
PF03054
GMP_synt_C
GATase
Peptidase_C26
NAD_synthase
tRNA_Me_trans
GMP synthase C terminal domain
Glutamine amidotransferase class-I
Peptidase C26
NAD synthase
tRNA methyl transferase HUP domain
6.80E-43
7.00E-41
1.70E-11
4.70E-09
8.80E-06
WP_011641178.1 2038904 2038364 - 179PF00156PribosyltranPhosphoribosyl transferase domain3.90E-34
WP_011641179.1 2039740 2039023 - 238NO PFAM MATCH---
WP_049750183.1 2040141 2041521 + 459PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
5.20E-116
1.30E-21
WP_011641181.1 2043820 2041579 - 746PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-97
WP_011641182.1 2045476 2044051 - 474PF18679
PF00881
HTH_57
Nitroreductase
ThcOx helix turn helix domain
Nitroreductase family
4.00E-16
6.60E-13
WP_011641183.1 2045902 2045575 - 108NO PFAM MATCH---
WP_011641184.1 2046464 2045894 - 189PF04542
PF08281
PF04545
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma-70 region 2
Sigma-70, region 4
Sigma-70, region 4
2.00E-16
1.50E-07
4.00E-06
WP_011641185.1 2046929 2046620 - 102PF02979
PF14407
NHase_alpha
Frankia_peptide
Nitrile hydratase, alpha chain
Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
2.30E-09
1.60E-05
WP_242649321.1 2047467 2048787 + 439PF07694
PF07228
5TM-5TMR_LYT
SpoIIE
5TMR of 5TMR-LYT
Stage II sporulation protein E (SpoIIE)
1.20E-51
1.60E-49
WP_011641187.1 2048787 2049192 + 134PF13581HATPase_c_2Histidine kinase-like ATPase domain5.10E-23
WP_011641188.1 2049227 2049560 + 110PF01740
PF13466
STAS
STAS_2
STAS domain
STAS domain
6.00E-18
1.10E-11
WP_011641189.1 2051930 2049581 - 782PF19974
PF01740
PF01636
PF06293
PF13466
TCAD9
STAS
APH
Kdo
STAS_2
Ternary complex associated domain 9
STAS domain
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
STAS domain
4.50E-77
4.50E-09
1.50E-07
1.20E-05
6.00E-05

Results for WP_011659928.1 [Burkholderia ambifaria] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011659937.1 624415 625537 + 373PF08240
PF00107
PF13602
PF16912
ADH_N
ADH_zinc_N
ADH_zinc_N_2
Glu_dehyd_C
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
6.10E-33
6.90E-29
4.90E-08
5.50E-04
WP_011356737.1 625514 626236 + 240INFERRED GENE---
WP_011659935.1 626447 627539 + 363PF13609
PF00267
Porin_4
Porin_1
Gram-negative porin
Gram-negative porin
2.20E-49
1.00E-04
WP_011659934.1 629096 627608 - 495PF00171AldedhAldehyde dehydrogenase family1.90E-149
WP_011659933.1 630736 629137 - 532PF00732
PF05199
PF00890
PF13738
PF01266
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Pyr_redox_3
DAO
GMC oxidoreductase
GMC oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
1.10E-80
8.00E-42
8.10E-06
4.30E-05
1.50E-04
WP_011659931.1 631121 632072 + 316PF12833
PF14525
PF00165
HTH_18
AraC_binding_2
HTH_AraC
Helix-turn-helix domain
AraC-binding-like domain
Bacterial regulatory helix-turn-helix proteins, AraC family
5.40E-20
1.50E-13
1.90E-10
WP_011659930.1 632390 632258 - 43NO PFAM MATCH---
WP_011659929.1 632670 633246 + 191PF12306PixAInclusion body protein2.00E-30
WP_011659928.1 635610 633372 - 745PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-89
WP_011659927.1 636067 635704 - 120NO PFAM MATCH---
WP_011659926.1 636428 636083 - 114NO PFAM MATCH---
WP_011659925.1 640508 636461 - 1348PF00069
PF07714
PF13191
PF13401
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
2.10E-43
3.80E-24
2.20E-15
3.60E-04
WP_011659924.1 641506 640504 - 333PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
2.30E-15
5.20E-07
WP_011659923.1 642316 643030 + 237PF03551PadRTranscriptional regulator PadR-like family1.80E-20
WP_011659922.1 643067 643889 + 273PF04954
PF08021
SIP
FAD_binding_9
Siderophore-interacting protein
Siderophore-interacting FAD-binding domain
1.20E-36
1.20E-36
WP_011659921.1 644008 644233 + 74NO PFAM MATCH---
WP_011659920.1 644853 644271 - 193PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
4.00E-18
1.60E-07

Results for WP_007802858.1 [Salipiger bermudensis HTCC2601] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007802844.1 620789 619973 - 271PF13561
PF00106
PF08659
PF00291
adh_short_C2
adh_short
KR
PALP
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
Pyridoxal-phosphate dependent enzyme
2.80E-65
1.70E-55
6.30E-16
2.80E-04
WP_007802845.1 621610 620812 - 265PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
9.50E-51
2.50E-43
1.30E-06
5.70E-06
WP_007802848.1 621842 623048 + 401PF03441FAD_binding_7FAD binding domain of DNA photolyase2.40E-22
WP_007802849.1 623044 624376 + 443PF03109ABC1ABC1 atypical kinase-like domain1.70E-60
WP_007802850.1 626455 624400 - 684PF02518
PF00072
PF08447
PF08448
PF00512
HATPase_c
Response_reg
PAS_3
PAS_4
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
PAS fold
PAS fold
His Kinase A (phospho-acceptor) domain
3.10E-18
3.80E-14
2.80E-12
3.50E-11
2.90E-08
WP_007802852.1 627049 627298 + 82NO PFAM MATCH---
WP_007802854.1 628953 627408 - 514PF03572Peptidase_S41Peptidase family S411.70E-12
WP_007802856.1 630318 628980 - 445PF00881NitroreductaseNitroreductase family9.50E-17
WP_007802858.1 632573 630314 - 752PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-94
R2601_RS27190 632688 633314 + 208INFERRED GENE---
WP_217626400.1 633827 633414 - 138NO PFAM MATCH---
WP_007802862.1 634761 633969 - 263PF00043
PF13410
GST_C
GST_C_2
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
6.40E-07
6.70E-07
WP_040545715.1 636117 634770 - 448PF00067p450Cytochrome P4509.70E-13
WP_007802865.1 637837 636127 - 569NO PFAM MATCH---
WP_007802866.1 638864 637850 - 337NO PFAM MATCH---
WP_040545716.1 639537 638865 - 223NO PFAM MATCH---
WP_007802869.1 640262 640748 + 161PF01047
PF12802
MarR
MarR_2
MarR family
MarR family
1.30E-09
5.10E-07

Results for WP_011611942.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_012035355.1 [Methanocella arvoryzae MRE50] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012035347.1 1012002 1013895 + 630PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
1.10E-123
9.00E-73
WP_231844948.1 1013872 1014199 + 108PF02597ThiSThiS family9.50E-10
WP_012035349.1 1014307 1015585 + 425PF00534
PF13439
PF13692
PF13579
PF13524
Glycos_transf_1
Glyco_transf_4
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
1.70E-26
7.20E-24
4.60E-16
1.30E-10
6.90E-06
WP_012035350.1 1015608 1017687 + 692PF14742
PF06202
GDE_N_bis
GDE_C
N-terminal domain of (some) glycogen debranching enzymes
Amylo-alpha-1,6-glucosidase
9.30E-44
2.00E-07
WP_012035351.1 1017850 1018225 + 124NO PFAM MATCH---
WP_012035352.1 1020046 1020391 + 114NO PFAM MATCH---
WP_012035353.1 1020528 1020762 + 77NO PFAM MATCH---
WP_012035354.1 1021479 1020831 - 215PF07812TfuATfuA-like protein5.40E-48
WP_012035355.1 1022723 1021475 - 415PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.20E-90
WP_012035356.1 1022933 1023383 + 149NO PFAM MATCH---
WP_012035358.1 1023950 1024280 + 109PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)1.40E-27
WP_012035359.1 1025126 1024343 - 260PF07382HC2Histone H1-like nucleoprotein HC26.20E-05
WP_012035360.1 1025820 1025136 - 227PF08979DUF1894Domain of unknown function (DUF1894)2.50E-62
WP_012035361.1 1027327 1025830 - 498PF09887DUF2114Uncharacterized protein conserved in archaea (DUF2114)7.60E-231
WP_012035362.1 1028437 1027498 - 312PF02007MtrHTetrahydromethanopterin S-methyltransferase MtrH subunit2.30E-125
WP_012035363.1 1028651 1028450 - 66PF04210MtrGTetrahydromethanopterin S-methyltransferase, subunit G6.80E-22
WP_012035364.1 1029399 1028652 - 248PF04208
PF09472
MtrA
MtrF
Tetrahydromethanopterin S-methyltransferase, subunit A
Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF)
1.90E-83
4.50E-22

Results for WP_011495278.1 [Shewanella denitrificans OS217] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011495269.1 935343 933918 - 474PF00919
PF04055
PF01938
UPF0004
Radical_SAM
TRAM
Uncharacterized protein family UPF0004
Radical SAM superfamily
TRAM domain
6.60E-30
1.40E-23
7.60E-16
WP_011495270.1 935823 935436 - 128NO PFAM MATCH---
WP_011495271.1 936050 937286 + 411PF01494
PF01266
PF07992
PF04820
PF08491
FAD_binding_3
DAO
Pyr_redox_2
Trp_halogenase
SE
FAD binding domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Tryptophan halogenase
Squalene epoxidase
7.00E-30
2.70E-07
3.60E-07
1.60E-05
1.80E-05
WP_011495272.1 937378 937966 + 195PF01195Pept_tRNA_hydroPeptidyl-tRNA hydrolase4.40E-60
WP_011495273.1 938056 939148 + 363PF06071
PF01926
PF02421
YchF-GTPase_C
MMR_HSR1
FeoB_N
Protein of unknown function (DUF933)
50S ribosome-binding GTPase
Ferrous iron transport protein B
6.10E-38
4.20E-22
1.90E-08
WP_157599829.1 941219 941567 + 115NO PFAM MATCH---
WP_011495276.1 941608 942418 + 269PF00753Lactamase_BMetallo-beta-lactamase superfamily2.80E-06
WP_011495277.1 942611 943904 + 430PF01053
PF00155
PF01041
PF00266
PF01212
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
Beta-eliminating lyase
2.40E-136
1.90E-10
1.80E-09
1.00E-07
3.60E-04
WP_011495278.1 944094 946281 + 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.50E-71
2.30E-70
2.40E-09
WP_041405667.1 947073 946602 - 156PF02863
PF01316
Arg_repressor_C
Arg_repressor
Arginine repressor, C-terminal domain
Arginine repressor, DNA binding domain
5.40E-23
5.70E-22
WP_011495280.1 947351 948287 + 311PF02866
PF00056
Ldh_1_C
Ldh_1_N
lactate/malate dehydrogenase, alpha/beta C-terminal domain
lactate/malate dehydrogenase, NAD binding domain
7.30E-49
4.30E-46
WP_011495281.1 948368 949121 + 250PF13561
PF00106
PF01370
PF08659
PF16363
adh_short_C2
adh_short
Epimerase
KR
GDP_Man_Dehyd
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
GDP-mannose 4,6 dehydratase
5.80E-31
1.70E-26
1.70E-09
4.40E-08
1.10E-04
WP_041406044.1 950191 949498 - 230PF018125-FTHF_cyc-lig5-formyltetrahydrofolate cyclo-ligase family5.90E-37
WP_011495283.1 950808 950499 - 102PF05164ZapACell division protein ZapA5.60E-23
WP_011495284.1 951170 951746 + 191PF03695UPF0149Uncharacterised protein family (UPF0149)5.50E-38
WP_011495285.1 951781 953047 + 421PF01494FAD_binding_3FAD binding domain1.20E-21
WP_011495286.1 953123 954341 + 405PF01494
PF01266
PF03486
PF07992
FAD_binding_3
DAO
HI0933_like
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
8.60E-29
9.90E-06
5.60E-05
8.70E-04

Results for WP_011500084.1 [Methanococcoides burtonii DSM 6242] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011500078.1 2167171 2166193 - 325PF02683
PF13192
DsbD
Thioredoxin_3
Cytochrome C biogenesis protein transmembrane region
Thioredoxin domain
7.30E-19
1.60E-05
WP_011500079.1 2168343 2167167 - 391NO PFAM MATCH---
WP_011500080.1 2169309 2168676 - 210NO PFAM MATCH---
WP_198003742.1 2170125 2170890 + 254PF01040UbiAUbiA prenyltransferase family2.20E-28
WP_011500082.1 2171556 2170875 - 226PF13412HTH_24Winged helix-turn-helix DNA-binding6.60E-06
WP_048063386.1 2171809 2172208 + 132PF00512HisKAHis Kinase A (phospho-acceptor) domain3.90E-19
WP_011500083.1 2173745 2172566 - 392PF00266
PF01041
PF01053
PF01212
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Cys/Met metabolism PLP-dependent enzyme
Beta-eliminating lyase
6.00E-128
1.20E-08
2.10E-07
1.50E-04
WP_157196719.1 2173941 2173791 - 49NO PFAM MATCH---
WP_011500084.1 2174109 2175390 + 426PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-88
WP_011500085.1 2175394 2176039 + 214PF07812TfuATfuA-like protein2.70E-47
WP_011500086.1 2176479 2176041 - 145PF02742
PF01325
PF12802
PF01047
Fe_dep_repr_C
Fe_dep_repress
MarR_2
MarR
Iron dependent repressor, metal binding and dimerisation domain
Iron dependent repressor, N-terminal DNA binding domain
MarR family
MarR family
5.40E-15
1.30E-11
1.40E-05
1.80E-04
WP_011500087.1 2177383 2176537 - 281PF00293
PF09297
PF09296
NUDIX
zf-NADH-PPase
NUDIX-like
NUDIX domain
NADH pyrophosphatase zinc ribbon domain
NADH pyrophosphatase-like rudimentary NUDIX domain
8.50E-21
7.50E-08
5.70E-05
WP_011500088.1 2178756 2177448 - 435PF13194
PF02308
DUF4010
MgtC
Domain of unknown function (DUF4010)
MgtC family
4.90E-49
2.30E-21
WP_232221902.1 2178927 2179449 + 173PF00753Lactamase_BMetallo-beta-lactamase superfamily2.60E-12
WP_232221903.1 2179417 2180287 + 289PF00581RhodaneseRhodanese-like domain1.50E-25
WP_011500089.1 2180985 2180604 - 126PF02579Nitro_FeMo-CoDinitrogenase iron-molybdenum cofactor2.80E-21
WP_011500090.1 2181724 2181067 - 218PF00753
PF12706
PF16661
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily domain
2.90E-11
5.90E-09
2.20E-06

Results for WP_011572013.1 [Haloquadratum walsbyi DSM 16790] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_052288749.1 2090524 2089876 - 215PF08000bPH_1Bacterial PH domain6.20E-04
WP_011572006.1 2092373 2091350 - 340PF14258
PF09822
DUF4350
ABC_transp_aux
Domain of unknown function (DUF4350)
ABC-type uncharacterized transport system
1.40E-10
1.90E-09
WP_011572007.1 2093352 2092365 - 328PF01343Peptidase_S49Peptidase family S494.40E-18
WP_048066800.1 2093519 2094068 + 182PF13419
PF00702
HAD_2
Hydrolase
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.20E-13
8.10E-09
WP_011572009.1 2094284 2094734 + 149NO PFAM MATCH---
WP_011572010.1 2095841 2094905 - 311PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.30E-66
2.20E-37
WP_011572011.1 2097240 2095992 - 415PF00464
PF00155
PF01212
PF01041
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
1.40E-148
8.30E-11
1.10E-05
4.50E-04
WP_011572012.1 2097629 2098454 + 274PF19138DUF5821Family of unknown function (DUF5821)3.70E-88
WP_011572013.1 2098501 2100295 + 597PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-50
WP_048067052.1 2101580 2100440 - 379PF01889DUF63Membrane protein of unknown function DUF633.00E-37
WP_011572015.1 2102620 2101810 - 269PF00459Inositol_PInositol monophosphatase family1.30E-54
WP_011572016.1 2103047 2102606 - 146PF00582UspUniversal stress protein family4.40E-29
WP_011572017.1 2103187 2103547 + 119PF01910Thiamine_BPThiamine-binding protein1.50E-22
WP_011572018.1 2103800 2104739 + 312PF02289MCHCyclohydrolase (MCH)2.10E-122
WP_011572019.1 2106246 2104899 - 448PF01435
PF16491
Peptidase_M48
Peptidase_M48_N
Peptidase family M48
CAAX prenyl protease N-terminal, five membrane helices
1.40E-38
3.30E-34
WP_011572020.1 2108230 2106601 - 542PF00009
PF03144
PF03143
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
Elongation factor Tu GTP binding domain
Elongation factor Tu domain 2
Elongation factor Tu C-terminal domain
5.70E-35
1.80E-11
5.40E-09
WP_011572021.1 2109419 2108900 - 172PF00226DnaJDnaJ domain5.50E-15

Results for WP_011554909.1 back to top

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Couldn't process WP_011554909.1 Genbank filestream. May be corrupt.

Results for WP_011552472.1 [Myxococcus xanthus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011552463.1 2983317 2988621 + 1767PF00005
PF17760
PF13304
PF13555
PF13191
ABC_tran
UvrA_inter
AAA_21
AAA_29
AAA_16
ABC transporter
UvrA interaction domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
AAA ATPase domain
1.30E-42
1.60E-23
6.80E-20
1.50E-18
7.00E-18
WP_011552464.1 2988656 2989247 + 196PF00255
PF00578
PF08534
GSHPx
AhpC-TSA
Redoxin
Glutathione peroxidase
AhpC/TSA family
Redoxin
5.30E-38
1.30E-05
9.90E-05
WP_171452248.1 2989377 2990352 + 324PF19459DUF5996Family of unknown function (DUF5996)3.40E-129
WP_011552466.1 2990990 2990408 - 193PF13590DUF4136Domain of unknown function (DUF4136)9.00E-28
WP_225909910.1 2991572 2991098 - 157NO PFAM MATCH---
WP_011552469.1 2992102 2991580 - 173PF13490zf-HC2Putative zinc-finger9.40E-04
WP_011552470.1 2992743 2992101 - 213PF04542
PF08281
PF04545
PF00196
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma-70 region 2
Sigma-70, region 4
Sigma-70, region 4
Bacterial regulatory proteins, luxR family
2.80E-16
4.50E-12
9.30E-09
3.00E-06
WP_225888773.1 2992914 2993493 + 192PF02830
PF09536
V4R
DUF2378
V4R domain
Protein of unknown function (DUF2378)
5.60E-05
6.20E-04
WP_011552472.1 2993704 2994868 + 387PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-54
WP_011552473.1 2994864 2996028 + 387PF07812TfuATfuA-like protein3.20E-43
WP_225909911.1 2996219 2998277 + 685PF00069
PF07714
PF01636
PF06293
Pkinase
PK_Tyr_Ser-Thr
APH
Kdo
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
4.50E-20
9.60E-10
6.10E-04
8.50E-04
WP_011552475.1 2998327 2999242 + 304PF09544DUF2381Protein of unknown function (DUF2381)1.00E-45
WP_011552476.1 2999292 3000075 + 260PF01555N6_N4_MtaseDNA methylase3.40E-15
WP_011552477.1 3000692 3000053 - 212PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamily3.60E-05
WP_011552478.1 3000772 3002050 + 425PF00375SDFSodium:dicarboxylate symporter family6.00E-114
WP_011552479.1 3002123 3002609 + 161PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomerase3.60E-14
WP_011552480.1 3002711 3004607 + 631PF03169OPTOPT oligopeptide transporter protein8.80E-92

Results for WP_011534436.1 [Pseudomonas entomophila L48] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011534428.1 3544418 3544802 + 127PF14552
PF01361
Tautomerase_2
Tautomerase
Tautomerase enzyme
Tautomerase enzyme
1.20E-31
1.10E-13
WP_011534429.1 3544893 3545787 + 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-34
2.30E-18
WP_011534430.1 3545879 3546584 + 234PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
1.10E-47
1.40E-35
WP_011534431.1 3548224 3546595 - 542PF00924
PF05552
MS_channel
TM_helix
Mechanosensitive ion channel
Conserved TM helix
1.60E-29
9.60E-04
WP_011534432.1 3548582 3549755 + 390PF13411
PF00376
PF13649
PF08241
PF13578
MerR_1
MerR
Methyltransf_25
Methyltransf_11
Methyltransf_24
MerR HTH family regulatory protein
MerR family regulatory protein
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.20E-17
1.50E-12
2.70E-12
6.50E-12
4.60E-08
WP_011534433.1 3549777 3550284 + 168PF00583
PF13527
PF13508
PF13673
Acetyltransf_1
Acetyltransf_9
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.20E-10
6.10E-10
2.20E-08
3.80E-05
WP_011534434.1 3550478 3550340 - 45NO PFAM MATCH---
WP_086009444.1 3550654 3550510 - 47NO PFAM MATCH---
WP_011534436.1 3553191 3550992 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.80E-75
1.10E-72
3.40E-08
WP_011534437.1 3553449 3553839 + 129NO PFAM MATCH---
WP_011534438.1 3554180 3553835 - 114NO PFAM MATCH---
WP_011534439.1 3554313 3554994 + 226PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)6.70E-22
WP_011534440.1 3555193 3554998 - 64PF06945DUF1289Protein of unknown function (DUF1289)2.80E-15
WP_011534441.1 3557512 3555256 - 751NO PFAM MATCH---
WP_011534442.1 3560388 3557592 - 931PF00501
PF13193
PF00550
AMP-binding
AMP-binding_C
PP-binding
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
Phosphopantetheine attachment site
1.60E-70
5.50E-11
1.40E-06
WP_011534443.1 3560690 3561086 + 131NO PFAM MATCH---
WP_011534444.1 3561158 3561674 + 171PF13238
PF13671
PF13521
PF01202
AAA_18
AAA_33
AAA_28
SKI
AAA domain
AAA domain
AAA domain
Shikimate kinase
7.90E-06
8.10E-05
4.40E-04
6.40E-04

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011519247.1 [Cupriavidus metallidurans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_223277464.1 247643 248447 + 267PF00892EamAEamA-like transporter family4.70E-19
WP_011519240.1 249049 248443 - 201PF00583
PF13302
PF13508
Acetyltransf_1
Acetyltransf_3
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
7.90E-07
1.10E-05
1.10E-04
WP_029310155.1 249137 249608 + 156PF01638HxlRHxlR-like helix-turn-helix4.70E-16
WP_011519242.1 249920 251234 + 437PF07690
PF13347
PF12832
MFS_1
MFS_2
MFS_1_like
Major Facilitator Superfamily
MFS/sugar transport protein
MFS_1 like family
2.30E-29
1.90E-05
5.40E-04
WP_011519243.1 251271 253833 + 853PF07992
PF01077
PF00070
PF04324
PF18267
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
Rubredoxin_C
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
BFD-like [2Fe-2S] binding domain
Rubredoxin NAD+ reductase C-terminal domain
1.60E-50
1.20E-17
3.10E-16
7.10E-15
6.00E-12
WP_011519244.1 253858 254260 + 133PF13806Rieske_2Rieske-like [2Fe-2S] domain5.80E-40
WP_011519245.1 254313 255555 + 413PF07992
PF00070
PF18267
PF13738
PF13454
Pyr_redox_2
Pyr_redox
Rubredoxin_C
Pyr_redox_3
NAD_binding_9
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Rubredoxin NAD+ reductase C-terminal domain
Pyridine nucleotide-disulphide oxidoreductase
FAD-NAD(P)-binding
1.10E-57
1.00E-19
8.90E-19
7.10E-08
4.20E-06
WP_011519246.1 255573 258321 + 915PF00384
PF01568
PF04879
PF04324
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_BFD
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
BFD-like [2Fe-2S] binding domain
1.00E-81
6.10E-28
1.40E-17
2.60E-13
WP_011519247.1 260726 258521 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.80E-72
1.40E-70
3.90E-07
WP_011519248.1 261269 261896 + 208PF08348
PF13309
PAS_6
HTH_22
YheO-like PAS domain
HTH domain
1.00E-34
1.70E-16
WP_011519249.1 261885 262866 + 326PF02423OCD_Mu_crystallOrnithine cyclodeaminase/mu-crystallin family4.40E-61
WP_011519250.1 262889 263858 + 322PF00291PALPPyridoxal-phosphate dependent enzyme1.90E-77
WP_186401024.1 265312 263920 - 463PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
2.70E-47
3.20E-06
WP_011519252.1 266602 265543 - 352PF01370
PF16363
PF01073
PF13460
PF04321
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
3-beta hydroxysteroid dehydrogenase/isomerase family
NAD(P)H-binding
RmlD substrate binding domain
1.20E-48
5.50E-28
3.20E-06
6.10E-06
1.70E-05
WP_011519253.1 268398 266670 - 575PF18583
PF13231
Arnt_C
PMT_2
Aminoarabinose transferase C-terminal domain
Dolichyl-phosphate-mannose-protein mannosyltransferase
2.50E-36
2.20E-15
WP_011519254.1 268636 269344 + 235PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.10E-22
4.00E-19
WP_011519255.1 269340 270714 + 457PF02518
PF00512
PF08521
HATPase_c
HisKA
2CSK_N
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Two-component sensor kinase N-terminal
4.10E-13
1.40E-11
1.60E-08

Results for WP_011655328.1 back to top

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Couldn't process WP_011655328.1 Genbank filestream. May be corrupt.

Results for WP_011653106.1 back to top

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Couldn't process WP_011653106.1 Genbank filestream. May be corrupt.

Results for WP_007016745.1 [Bermanella marisrubri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020683281.1 904627 904717 + 30INFERRED GENE---
WP_007016737.1 908121 904719 - 1133PF05567
PF13517
PF01839
Neisseria_PilC
FG-GAP_3
FG-GAP
Neisseria PilC beta-propeller domain
FG-GAP-like repeat
FG-GAP repeat
6.40E-20
3.70E-04
4.00E-04
WP_007016738.1 908443 908137 - 101NO PFAM MATCH---
WP_007016739.1 908934 908451 - 160PF14341PilX_NPilX N-terminal3.40E-05
WP_007016740.1 909767 908951 - 271PF16074
PF07963
PilW
N_methyl
Type IV Pilus-assembly protein W
Prokaryotic N-terminal methylation motif
5.70E-13
9.90E-07
WP_007016741.1 910378 909766 - 203PF07963N_methylProkaryotic N-terminal methylation motif1.10E-04
WP_007016742.1 910877 910388 - 162PF12019
PF07963
GspH
N_methyl
Type II transport protein GspH
Prokaryotic N-terminal methylation motif
3.80E-13
2.20E-09
WP_007016743.1 911557 911002 - 184PF12019
PF07963
GspH
N_methyl
Type II transport protein GspH
Prokaryotic N-terminal methylation motif
2.60E-15
9.10E-08
WP_007016744.1 913028 911633 - 464PF00158
PF14532
PF00072
PF02954
PF07728
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Sigma-54 interaction domain
Sigma-54 interaction domain
Response regulator receiver domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
3.80E-67
8.40E-28
6.60E-25
1.70E-17
3.60E-06
WP_007016745.1 915359 913163 - 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
9.90E-74
1.60E-73
3.00E-08
WP_007016746.1 917003 915458 - 514PF02518
PF00512
PF13581
HATPase_c
HisKA
HATPase_c_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
6.70E-19
4.60E-15
7.30E-05
WP_007016747.1 917075 918707 + 543PF02540
PF00795
PF06508
NAD_synthase
CN_hydrolase
QueC
NAD synthase
Carbon-nitrogen hydrolase
Queuosine biosynthesis protein QueC
3.60E-73
1.00E-25
8.00E-04
WP_007016748.1 918936 919194 + 85PF00886Ribosomal_S16Ribosomal protein S168.90E-25
WP_007016749.1 919218 919749 + 176PF01782
PF05239
RimM
PRC
RimM N-terminal domain
PRC-barrel domain
3.30E-21
3.60E-08
WP_007016750.1 919751 920504 + 250PF01746tRNA_m1G_MTtRNA (Guanine-1)-methyltransferase1.50E-65
WP_007016751.1 920533 920896 + 120PF01245Ribosomal_L19Ribosomal protein L193.60E-49
WP_168367038.1 921119 921548 + 142PF00572Ribosomal_L13Ribosomal protein L132.10E-48
WP_168367039.1 921559 921952 + 130PF00380Ribosomal_S9Ribosomal protein S9/S164.40E-46

Results for WP_011505345.1 [Chromohalobacter salexigens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_263433892.1 350995 350821 - 57PF18024
PF02954
PF00126
HTH_50
HTH_8
HTH_1
Helix-turn-helix domain
Bacterial regulatory protein, Fis family
Bacterial regulatory helix-turn-helix protein, lysR family
4.90E-09
9.30E-06
1.80E-05
K9O32_RS03540 351335 351848 + 171INFERRED GENE---
WP_224113435.1 353940 352347 - 530PF00474SSFSodium:solute symporter family3.20E-33
WP_011505340.1 354159 353979 - 59NO PFAM MATCH---
WP_263433893.1 355466 354209 - 418PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.20E-36
3.50E-14
WP_224113437.1 356797 355546 - 416PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
7.00E-36
3.80E-08
WP_011505343.1 357059 357536 + 158PF04828GFAGlutathione-dependent formaldehyde-activating enzyme4.50E-10
WP_263433904.1 357886 359662 + 591PF00015
PF12729
MCPsignal
4HB_MCP_1
Methyl-accepting chemotaxis protein (MCP) signalling domain
Four helix bundle sensory module for signal transduction
3.10E-49
2.70E-12
WP_011505345.1 359867 362075 + 735PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.70E-75
1.00E-68
1.20E-10

Results for WP_011464850.1 back to top

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Couldn't process WP_011464850.1 Genbank filestream. May be corrupt.

Results for WP_006232836.1 [Photobacterium profundum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006232844.1 12297 11619 - 225PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.10E-17
WP_006232843.1 13041 12300 - 246PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.60E-22
WP_006232842.1 13929 13152 - 258PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
5.10E-58
9.70E-10
WP_036804106.1 14823 14052 - 256PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
2.20E-31
6.60E-11
2.90E-06
4.60E-04
WP_107281279.1 15090 16818 + 575PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle1.90E-55
WP_006232839.1 17127 16833 - 97PF12840
PF01022
PF12802
PF01978
PF09339
HTH_20
HTH_5
MarR_2
TrmB
HTH_IclR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Sugar-specific transcriptional regulator TrmB
IclR helix-turn-helix domain
1.00E-12
2.60E-05
1.20E-04
5.40E-04
6.70E-04
WP_006232838.1 18766 17284 - 493PF03606DcuCC4-dicarboxylate anaerobic carrier9.20E-120
WP_006232837.1 20130 18762 - 455PF01546Peptidase_M20Peptidase family M20/M25/M401.60E-34
WP_006232836.1 20599 22336 + 578PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.20E-66
2.00E-53
WP_006232835.1 22810 24325 + 504PF11840DUF3360Protein of unknown function (DUF3360)2.30E-259
WP_006232834.1 24538 26815 + 758PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-200
5.30E-43
WP_006232833.1 27013 27718 + 234NO PFAM MATCH---
WP_006232832.1 27963 28704 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.00E-32
9.20E-20
8.00E-07
WP_006232831.1 29009 30002 + 330PF03401TctCTripartite tricarboxylate transporter family receptor2.70E-24
WP_006232830.1 30108 30618 + 169PF07331TctBTripartite tricarboxylate transporter TctB family4.30E-15
WP_006232829.1 30628 32161 + 510PF01970TctATripartite tricarboxylate transporter TctA family1.20E-139
WP_006232828.1 32442 32289 - 50NO PFAM MATCH---

Results for WP_011455382.1 [Jannaschia sp. CCS1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011455374.1 2260619 2259983 - 211PF08856DUF1826Protein of unknown function (DUF1826)3.10E-57
WP_011455375.1 2261827 2260615 - 403PF02492
PF07683
PF03193
cobW
CobW_C
RsgA_GTPase
CobW/HypB/UreG, nucleotide-binding domain
Cobalamin synthesis protein cobW C-terminal domain
RsgA GTPase
6.90E-56
1.50E-23
6.00E-04
WP_011455376.1 2262741 2261823 - 305PF07992
PF00890
PF13738
PF01266
PF03486
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
DAO
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
4.60E-16
1.10E-05
2.50E-05
5.50E-05
7.00E-05
WP_011455377.1 2262839 2263250 + 136PF02082
PF13545
PF12802
Rrf2
HTH_Crp_2
MarR_2
Iron-dependent Transcriptional regulator
Crp-like helix-turn-helix domain
MarR family
5.10E-31
3.00E-05
5.20E-04
WP_011455378.1 2263958 2263685 - 90NO PFAM MATCH---
WP_166486111.1 2264295 2266173 + 625PF03704
PF00515
PF07719
PF00486
PF13181
BTAD
TPR_1
TPR_2
Trans_reg_C
TPR_8
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
1.00E-10
6.00E-08
2.00E-06
1.80E-05
6.80E-04
WP_011455380.1 2266289 2268614 + 774NO PFAM MATCH---
WP_011455381.1 2268616 2269183 + 188NO PFAM MATCH---
WP_011455382.1 2269179 2270370 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-63
WP_166486112.1 2270474 2271083 + 202PF07812TfuATfuA-like protein7.30E-40
WP_256365436.1 2271312 2271177 - 44NO PFAM MATCH---
WP_011455384.1 2272533 2271423 - 369PF13458
PF13433
PF01094
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Periplasmic binding protein
Periplasmic binding protein domain
Receptor family ligand binding region
2.70E-49
1.20E-10
1.30E-07
WP_011455385.1 2273260 2272555 - 234PF00005
PF13304
PF13555
PF03193
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
3.20E-30
1.70E-09
1.00E-04
3.90E-04
WP_011455386.1 2274017 2273252 - 254PF00005
PF12399
PF13476
ABC_tran
BCA_ABC_TP_C
AAA_23
ABC transporter
Branched-chain amino acid ATP-binding cassette transporter
AAA domain
1.10E-27
3.80E-11
7.70E-05
WP_011455387.1 2274880 2274013 - 288PF02653BPD_transp_2Branched-chain amino acid transport system / permease component6.60E-34
WP_011455388.1 2275767 2274876 - 296PF02653BPD_transp_2Branched-chain amino acid transport system / permease component2.30E-47
WP_011455389.1 2276243 2275916 - 108PF07978NIPSNAPNIPSNAP2.50E-25

Results for WP_011447574.1 [Methanospirillum hungatei JF-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011447567.1 599511 598824 - 228PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.60E-14
WP_011447568.1 600472 599548 - 307PF12849
PF13531
PBP_like_2
SBP_bac_11
PBP superfamily domain
Bacterial extracellular solute-binding protein
1.90E-23
3.10E-08
WP_052288804.1 600901 601753 + 283PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair protein2.70E-16
WP_204223020.1 601797 601965 + 55NO PFAM MATCH---
WP_011447570.1 602369 601961 - 135PF02391MoaEMoaE protein8.90E-29
WP_011447571.1 602647 602371 - 91PF02597ThiSThiS family6.70E-11
WP_011447572.1 603390 602643 - 248PF00899ThiFThiF family8.40E-55
WP_011447573.1 604028 603386 - 213PF07812TfuATfuA-like protein5.40E-46
WP_011447574.1 605202 603981 - 406PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-95
WP_011447575.1 605332 605650 + 105PF10967DUF2769Protein of unknown function (DUF2769)3.30E-17
WP_011447576.1 606943 605671 - 423PF09670Cas_Cas02710CRISPR-associated protein (Cas_Cas02710)6.40E-131
WP_011447577.1 607027 607585 + 185PF03351DOMONDOMON domain4.50E-30
WP_011447578.1 607872 607587 - 94PF16927HisKA_7TMN-terminal 7TM region of histidine kinase1.10E-05
WP_011447579.1 608974 607939 - 344NO PFAM MATCH---
WP_011447580.1 609455 609032 - 140PF00293NUDIXNUDIX domain7.10E-16
WP_011447581.1 609547 610150 + 200PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
1.70E-32
1.90E-11
WP_048067753.1 611636 610151 - 494PF05872
PF01935
PF12846
PF01580
PF13401
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
AAA_22
Helicase HerA-like C-terminal
Helicase HerA, central domain
AAA-like domain
FtsK/SpoIIIE family
AAA domain
3.00E-195
5.60E-11
2.00E-05
7.50E-05
1.10E-04

Results for WP_011419920.1 [Anaeromyxobacter dehalogenans 2CP-C] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011419912.1 993550 992317 - 410PF12704
PF02687
MacB_PCD
FtsX
MacB-like periplasmic core domain
FtsX-like permease family
1.70E-26
4.30E-19
WP_011419913.1 994537 993631 - 301PF13365
PF00089
PF13180
PF17820
PF02163
Trypsin_2
Trypsin
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
Trypsin
PDZ domain
PDZ domain
Peptidase family M50
5.50E-29
2.00E-12
7.60E-10
9.10E-08
6.60E-07
WP_011419914.1 995472 994533 - 312PF13180
PF13365
PF17820
PF02163
PF00595
PDZ_2
Trypsin_2
PDZ_6
Peptidase_M50
PDZ
PDZ domain
Trypsin-like peptidase domain
PDZ domain
Peptidase family M50
PDZ domain
9.80E-15
4.90E-14
1.00E-11
4.00E-09
1.30E-04
WP_011419915.1 995619 996255 + 211PF00196
PF08281
GerE
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.30E-19
3.10E-06
WP_011419916.1 996361 996877 + 171PF13883
PF01243
Pyrid_oxidase_2
Putative_PNPOx
Pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase
3.90E-15
3.20E-09
WP_011419917.1 997303 998416 + 370NO PFAM MATCH---
WP_011419918.1 998821 998428 - 130PF01253SUI1Translation initiation factor SUI14.90E-09
WP_011419919.1 1000029 998817 - 403PF07812TfuATfuA-like protein7.60E-41
WP_011419920.1 1001165 1000025 - 379PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-56
WP_011419921.1 1001235 1002633 + 465PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
8.00E-34
1.60E-14
WP_011419922.1 1002762 1005288 + 841PF00343PhosphorylaseCarbohydrate phosphorylase0.00E+00
WP_011419923.1 1005634 1005190 - 147PF01035DNA_binding_16-O-methylguanine DNA methyltransferase, DNA binding domain6.50E-21
WP_041453316.1 1005741 1006293 + 183PF04885Stig1Stigma-specific protein, Stig12.90E-06
WP_011419925.1 1006386 1006971 + 194PF04011LemALemA family4.10E-54
WP_011419926.1 1006970 1007753 + 260PF04536TPM_phosphataseTPM domain1.50E-28
WP_011419927.1 1007763 1008405 + 213PF04536TPM_phosphataseTPM domain3.30E-08
WP_011419928.1 1009897 1008424 - 490PF00999
PF02080
Na_H_Exchanger
TrkA_C
Sodium/hydrogen exchanger family
TrkA-C domain
2.70E-46
3.70E-12

Results for WP_011438589.1 [Frankia sp. B2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_240724117.1 418 0 - 139PF13546DDE_5DDE superfamily endonuclease4.80E-30
WP_011438583.1 1327 736 - 196PF01814HemerythrinHemerythrin HHE cation binding domain1.40E-09
WP_134351106.1 3059 4463 + 467PF19307
PF00027
PCLP
cNMP_binding
Phage capsid-like protein
Cyclic nucleotide-binding domain
3.50E-136
6.20E-16
WP_134351108.1 4782 7065 + 760PF19086Terpene_syn_C_2Terpene synthase family 2, C-terminal metal binding1.40E-86
WP_134351110.1 7818 7065 - 250PF00881NitroreductaseNitroreductase family5.70E-34
WP_035911697.1 9186 7848 - 445PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-48
WP_011438589.1 10596 9195 - 466PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-52
WP_011438590.1 12206 10592 - 537PF02129
PF08530
PF00561
PF00326
PF12146
Peptidase_S15
PepX_C
Abhydrolase_1
Peptidase_S9
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
alpha/beta hydrolase fold
Prolyl oligopeptidase family
Serine aminopeptidase, S33
2.30E-40
3.10E-20
7.60E-05
9.20E-05
2.10E-04
WP_011438591.1 13026 12216 - 269NO PFAM MATCH---
WP_023840694.1 13431 13317 - 37NO PFAM MATCH---
WP_083282201.1 14871 13542 - 442PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
4.60E-20
2.10E-18
WP_011438594.1 15929 14927 - 333PF01497Peripla_BP_2Periplasmic binding protein1.00E-24
WP_011438595.1 16819 15961 - 285PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.00E-29
4.10E-10
6.40E-05
3.60E-04
WP_011438596.1 17961 16815 - 381PF01032FecCDFecCD transport family7.80E-94
WP_011438597.1 20094 18159 - 644PF00005
PF00664
PF02463
PF13748
ABC_tran
ABC_membrane
SMC_N
ABC_membrane_3
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
ABC transporter transmembrane region
4.10E-29
6.10E-17
9.20E-05
9.30E-04

Results for WP_011438588.1 [Frankia casuarinae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011438596.1 8404 9550 + 381PF01032FecCDFecCD transport family7.80E-94
WP_011438595.1 9546 10404 + 285PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.00E-29
4.10E-10
6.40E-05
3.60E-04
WP_011438594.1 10436 11438 + 333PF01497Peripla_BP_2Periplasmic binding protein1.00E-24
WP_083282201.1 11494 12823 + 442PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
4.60E-20
2.10E-18
WP_023840694.1 12934 13048 + 37NO PFAM MATCH---
WP_011438591.1 13297 14107 + 269NO PFAM MATCH---
WP_011438590.1 14117 15731 + 537PF02129
PF08530
PF00561
PF00326
PF12146
Peptidase_S15
PepX_C
Abhydrolase_1
Peptidase_S9
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
alpha/beta hydrolase fold
Prolyl oligopeptidase family
Serine aminopeptidase, S33
2.30E-40
3.10E-20
7.60E-05
9.20E-05
2.10E-04
WP_011438589.1 15727 17128 + 466PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-52
WP_011438588.1 17137 18475 + 445PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-48
WP_011438587.1 18505 19258 + 250PF00881NitroreductaseNitroreductase family5.00E-34
WP_011438586.1 21514 19258 - 751PF19086Terpene_syn_C_2Terpene synthase family 2, C-terminal metal binding1.30E-86
WP_011438585.1 23247 21843 - 467PF19307
PF00027
PCLP
cNMP_binding
Phage capsid-like protein
Cyclic nucleotide-binding domain
3.50E-136
1.20E-16
WP_011438583.1 24964 25555 + 196PF01814HemerythrinHemerythrin HHE cation binding domain1.40E-09

Results for WP_011428290.1 [Rhizobium etli CFN 42] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011428282.1 474234 473814 - 139NO PFAM MATCH---
WP_011428283.1 476010 474732 - 425PF13378
PF07476
PF02746
MR_MLE_C
MAAL_C
MR_MLE_N
Enolase C-terminal domain-like
Methylaspartate ammonia-lyase C-terminus
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
1.00E-60
4.00E-05
5.00E-05
WP_011428284.1 476823 476088 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
6.90E-57
1.70E-43
8.40E-07
2.80E-04
WP_011428285.1 477116 477902 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
4.80E-13
2.90E-11
3.30E-08
1.80E-06
5.80E-05
WP_020923242.1 477991 478828 + 278PF04909Amidohydro_2Amidohydrolase1.70E-40
WP_011428287.1 479090 479495 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
3.30E-12
3.40E-07
3.00E-06
WP_004668299.1 479803 479536 - 88NO PFAM MATCH---
WP_011428289.1 480611 479867 - 247PF07812TfuATfuA-like protein1.10E-37
WP_011428290.1 481870 480607 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-64
WP_166486945.1 482027 481883 - 47NO PFAM MATCH---
WP_041679087.1 484086 482130 - 651PF03704
PF14559
PF07719
PF13432
PF00515
BTAD
TPR_19
TPR_2
TPR_16
TPR_1
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.90E-14
3.30E-13
1.90E-09
8.00E-09
1.50E-08
WP_011428292.1 485219 484352 - 288PF01729
PF02749
PF13533
QRPTase_C
QRPTase_N
Biotin_lipoyl_2
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
Biotin-lipoyl like
4.50E-59
1.30E-27
6.80E-04
WP_011428293.1 486762 485220 - 513PF00890
PF01266
PF02910
PF07992
FAD_binding_2
DAO
Succ_DH_flav_C
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
Pyridine nucleotide-disulphide oxidoreductase
5.10E-80
2.20E-06
1.70E-04
2.10E-04
WP_011428294.1 487730 486758 - 323PF02445NadAQuinolinate synthetase A protein7.20E-113
WP_020923246.1 488696 487799 - 298PF19368AraR_CAraR C-terminal winged HTH domain2.10E-07
WP_187331741.1 489632 488816 - 271PF02548Pantoate_transfKetopantoate hydroxymethyltransferase4.60E-42
WP_011428297.1 490884 489657 - 408PF07992
PF14759
PF00070
PF01262
PF01266
Pyr_redox_2
Reductase_C
Pyr_redox
AlaDh_PNT_C
DAO
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
Alanine dehydrogenase/PNT, C-terminal domain
FAD dependent oxidoreductase
3.70E-65
5.50E-21
1.10E-18
4.30E-04
6.00E-04

Results for WP_011417308.1 [Syntrophus aciditrophicus SB] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_148202458.1 1424055 1424895 + 279PF02662
PF00037
PF13237
PF12838
PF12837
FlpD
Fer4
Fer4_10
Fer4_7
Fer4_6
Methyl-viologen-reducing hydrogenase, delta subunit
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.20E-46
3.00E-13
7.10E-10
1.60E-09
7.20E-09
WP_011417300.1 1425201 1425696 + 164PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
2.20E-13
1.80E-11
8.20E-04
WP_049749931.1 1426010 1427261 + 416PF00872Transposase_mutTransposase, Mutator family2.70E-68
WP_148202517.1 1427615 1427378 - 78NO PFAM MATCH---
WP_148202518.1 1427687 1429115 + 475PF13353
PF13394
PF04055
PF13186
Fer4_12
Fer4_14
Radical_SAM
SPASM
4Fe-4S single cluster domain
4Fe-4S single cluster domain
Radical SAM superfamily
Iron-sulfur cluster-binding domain
2.20E-07
3.50E-06
4.20E-06
3.20E-04
WP_011417303.1 1429162 1429456 + 97NO PFAM MATCH---
WP_011417306.1 1430314 1430665 + 116PF02979NHase_alphaNitrile hydratase, alpha chain1.00E-14
WP_011417307.1 1430755 1431748 + 330PF04055Radical_SAMRadical SAM superfamily3.40E-16
WP_011417308.1 1431757 1434022 + 754PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-88
WP_041584826.1 1434050 1435412 + 453PF00881NitroreductaseNitroreductase family2.70E-13
WP_011417310.1 1435540 1436824 + 427PF03453
PF00994
PF03454
MoeA_N
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
9.00E-43
8.40E-23
6.30E-19
WP_011417311.1 1438022 1436966 - 351PF00005
PF03459
PF02463
PF13166
PF01935
ABC_tran
TOBE
SMC_N
AAA_13
DUF87
ABC transporter
TOBE domain
RecF/RecN/SMC N terminal domain
AAA domain
Helicase HerA, central domain
6.60E-31
4.00E-11
7.10E-05
1.40E-04
3.00E-04
WP_041584828.1 1438710 1438023 - 228PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.30E-20
WP_202943604.1 1439473 1438720 - 250PF13531
PF01547
SBP_bac_11
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
4.90E-46
5.40E-13
WP_011417314.1 1440224 1439798 - 141PF03459TOBETOBE domain3.70E-34
WP_041584829.1 1442321 1440362 - 652PF12727
PF03453
PF00994
PF03454
PF12974
PBP_like
MoeA_N
MoCF_biosynth
MoeA_C
Phosphonate-bd
PBP superfamily domain
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
ABC transporter, phosphonate, periplasmic substrate-binding protein
1.30E-66
4.00E-34
5.10E-24
2.70E-11
4.50E-04
WP_011417316.1 1443582 1442349 - 410PF03453
PF00994
PF03454
MoeA_N
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
2.10E-37
3.80E-22
3.80E-12

Results for WP_011406735.1 [Methanosphaera stadtmanae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011406727.1 27689 26975 - 237PF04446
PF14413
Thg1
Thg1C
tRNAHis guanylyltransferase
Thg1 C terminal domain
3.30E-32
6.00E-05
WP_112149672.1 28531 27760 - 256PF01958
PF03447
PF01113
PF01408
PF01118
Asp_DH_C
NAD_binding_3
DapB_N
GFO_IDH_MocA
Semialdhyde_dh
Aspartate dehydrogenase, C-terminal
Homoserine dehydrogenase, NAD binding domain
Dihydrodipicolinate reductase, N-terminus
Oxidoreductase family, NAD-binding Rossmann fold
Semialdehyde dehydrogenase, NAD binding domain
7.90E-31
3.00E-20
3.90E-06
1.00E-04
6.10E-04
WP_011406729.1 28935 28554 - 126PF05239PRCPRC-barrel domain6.70E-10
WP_048059884.1 29206 29932 + 241PF18489
PF01588
Alpha_Helical
tRNA_bind
Alpha helical domain
Putative tRNA binding domain
3.20E-53
5.60E-16
WP_011406731.1 30150 29949 - 66PF04021Class_IIIsignalClass III signal peptide1.70E-07
WP_112149673.1 31082 30158 - 307PF00482T2SSFType II secretion system (T2SS), protein F6.50E-18
WP_011406733.1 32160 31158 - 333PF00557
PF01321
PF16189
Peptidase_M24
Creatinase_N
Creatinase_N_2
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
Creatinase/Prolidase N-terminal domain
3.80E-55
7.50E-09
1.90E-04
WP_112149674.1 32305 32929 + 207PF02163
PF19470
Peptidase_M50
DUF6007
Peptidase family M50
Family of unknown function (DUF6007)
9.10E-10
2.30E-05
WP_011406735.1 33141 34332 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-89
WP_011406736.1 34342 34681 + 112PF01981PTH2Peptidyl-tRNA hydrolase PTH28.20E-46
WP_011406737.1 34691 35351 + 219PF00696AA_kinaseAmino acid kinase family3.50E-16
WP_011406738.1 35352 35517 + 54PF07754HVO_2753_ZBPSmall zinc finger protein HVO_2753-like, Zn-binding pocket6.10E-13
WP_011406739.1 35556 35823 + 88PF00736EF1_GNEEF-1 guanine nucleotide exchange domain9.80E-21
WP_011406740.1 35939 37181 + 413PF01970TctATripartite tricarboxylate transporter TctA family1.50E-55
WP_181454862.1 38109 37173 - 311PF06325
PF02005
PF05175
PF03602
PF13649
PrmA
TRM
MTS
Cons_hypoth95
Methyltransf_25
Ribosomal protein L11 methyltransferase (PrmA)
N2,N2-dimethylguanosine tRNA methyltransferase
Methyltransferase small domain
Conserved hypothetical protein 95
Methyltransferase domain
8.50E-08
2.20E-06
2.80E-06
1.00E-05
1.20E-05
WP_011406742.1 38203 39538 + 444PF00437
PF06414
T2SSE
Zeta_toxin
Type II/IV secretion system protein
Zeta toxin
2.40E-57
4.20E-05
WP_112149676.1 39534 40368 + 277PF00482
PF09972
T2SSF
DUF2207
Type II secretion system (T2SS), protein F
Predicted membrane protein (DUF2207)
2.00E-19
4.80E-05

Results for WP_009893001.1 [Burkholderia thailandensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009892991.1 31371 30126 - 414PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
5.50E-26
1.00E-18
2.40E-09
WP_011851073.1 31389 31783 + 131INFERRED GENE---
WP_009892992.1 31749 32388 + 212PF13673Acetyltransf_10Acetyltransferase (GNAT) domain5.10E-05
WP_009892993.1 32384 33977 + 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
2.20E-73
1.10E-51
3.30E-09
4.30E-05
WP_009892994.1 34010 35207 + 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
4.00E-17
1.80E-14
1.30E-05
WP_009892996.1 35283 36552 + 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
3.30E-31
1.40E-07
1.30E-04
WP_223297024.1 38772 36636 - 711PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
3.30E-58
5.40E-34
WP_259595712.1 40136 39359 - 258PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain1.50E-40
WP_009893001.1 42490 40219 - 756PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-90
WP_009893002.1 42941 42578 - 120NO PFAM MATCH---
WP_009893003.1 43305 42942 - 120NO PFAM MATCH---
WP_011401796.1 47363 43301 - 1353PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
2.50E-44
6.40E-25
2.10E-19
1.80E-06
1.90E-06
WP_009893005.1 48372 47373 - 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
3.40E-17
2.80E-09
WP_009893006.1 48640 48994 + 117NO PFAM MATCH---
WP_011401794.1 49463 49838 + 124NO PFAM MATCH---
WP_009893009.1 50128 50506 + 125NO PFAM MATCH---
WP_009893010.1 50562 50904 + 113NO PFAM MATCH---

Results for WP_009897694.1 [Burkholderia thailandensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009897675.1 5401 6196 + 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.70E-41
9.30E-41
3.30E-08
WP_009897676.1 6690 6294 - 131PF04355SmpA_OmlASmpA / OmlA family2.20E-05
WP_009897678.1 7891 6820 - 356PF01594AI-2E_transportAI-2E family transporter2.50E-30
WP_009897680.1 8434 8005 - 142PF13673
PF00583
PF13508
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
8.60E-07
1.20E-06
1.90E-06
WP_009897683.1 9337 8575 - 253PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
3.20E-79
4.70E-15
WP_009897685.1 11022 9924 - 365PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.80E-62
WP_009900768.1 11923 11239 - 227PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
4.10E-17
1.00E-08
WP_009897693.1 13099 12493 - 201PF16925
PF00440
PF14246
TetR_C_13
TetR_N
TetR_C_7
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
AefR-like transcriptional repressor, C-terminal domain
2.90E-15
6.00E-13
2.70E-04
WP_009897694.1 13747 16396 + 882PF02624
PF07812
YcaO
TfuA
YcaO cyclodehydratase, ATP-ad Mg2+-binding
TfuA-like protein
6.40E-59
2.80E-33
WP_223297120.1 17160 16365 - 264PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)8.20E-18
WP_223297121.1 17808 17175 - 210PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamily1.60E-13
WP_009897698.1 17954 19505 + 516PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.20E-20
2.50E-07
7.40E-07
WP_009897700.1 19559 19877 + 105NO PFAM MATCH---
WP_011401366.1 19873 21814 + 646PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
8.90E-10
3.00E-04
WP_009897703.1 21810 23004 + 397PF08007
PF13621
JmjC_2
Cupin_8
JmjC domain
Cupin-like domain
2.10E-27
1.20E-07
WP_009897705.1 23000 23294 + 97PF02597ThiSThiS family1.10E-10
WP_009897707.1 23307 25239 + 643PF16861
PF02543
Carbam_trans_C
Carbam_trans_N
Carbamoyltransferase C-terminus
Carbamoyltransferase N-terminus
4.70E-60
4.30E-27

Results for WP_011371750.1 [Sulfurimonas denitrificans DSM 1251] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011371742.1 113744 110735 - 1002PF00563
PF13426
PF08376
PF00989
PF00990
EAL
PAS_9
NIT
PAS
GGDEF
EAL domain
PAS domain
Nitrate and nitrite sensing
PAS fold
Diguanylate cyclase, GGDEF domain
4.10E-58
2.50E-30
3.60E-26
2.50E-21
2.90E-20
WP_011371743.1 114816 113805 - 336NO PFAM MATCH---
WP_011371744.1 115723 114847 - 291PF00924MS_channelMechanosensitive ion channel3.70E-33
WP_011371745.1 116967 115737 - 409PF13191
PF13401
AAA_16
AAA_22
AAA ATPase domain
AAA domain
8.30E-05
3.70E-04
WP_011371746.1 117540 117003 - 178PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)9.60E-35
WP_011371747.1 118259 117536 - 240PF02654CobSCobalamin-5-phosphate synthase1.10E-42
WP_011371748.1 118753 118255 - 165PF02283CobUCobinamide kinase / cobinamide phosphate guanyltransferase1.20E-45
WP_011371749.1 119253 118824 - 142NO PFAM MATCH---
WP_011371750.1 120860 119249 - 536PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.90E-63
2.20E-06
WP_011371751.1 121819 120856 - 320PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
1.40E-78
3.60E-06
WP_011371752.1 122537 121811 - 241PF00005
PF02463
PF13304
PF13175
PF13166
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_13
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
2.40E-22
3.70E-13
2.90E-12
2.50E-06
2.00E-05
WP_011371753.1 123346 122533 - 270PF01497Peripla_BP_2Periplasmic binding protein1.40E-23
WP_011371754.1 125257 123355 - 633PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-30
4.20E-13
WP_011371755.1 125623 125281 - 113NO PFAM MATCH---
WP_011371756.1 125969 126179 + 69NO PFAM MATCH---
WP_011371757.1 126181 127369 + 395PF00145DNA_methylaseC-5 cytosine-specific DNA methylase1.00E-56
WP_011371758.1 127368 128406 + 345NO PFAM MATCH---

Results for WP_011368275.1 [Oleidesulfovibrio alaskensis G20] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_148204146.1 2421682 2420902 - 259PF17680FlgOFlgO protein2.20E-34
WP_011368268.1 2422388 2421698 - 229NO PFAM MATCH---
WP_011368269.1 2422848 2422461 - 128PF01627HptHpt domain3.40E-07
WP_011368270.1 2423059 2423599 + 179NO PFAM MATCH---
WP_011368271.1 2424594 2423709 - 294PF01261AP_endonuc_2Xylose isomerase-like TIM barrel8.20E-45
WP_011368272.1 2424707 2425169 + 153NO PFAM MATCH---
WP_011368273.1 2425678 2425342 - 111PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.10E-20
WP_011368274.1 2426085 2425674 - 136PF00893Multi_Drug_ResSmall Multidrug Resistance protein3.70E-18
WP_011368275.1 2426429 2428151 + 573PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-46
WP_011368276.1 2428311 2429331 + 339PF01699Na_Ca_exSodium/calcium exchanger protein2.10E-48
WP_011368277.1 2429994 2429415 - 192NO PFAM MATCH---
WP_011368278.1 2430098 2432522 + 807PF17201
PF00015
PF17202
PF00989
PF08269
Cache_3-Cache_2
MCPsignal
sCache_3_3
PAS
dCache_2
Cache 3/Cache 2 fusion domain
Methyl-accepting chemotaxis protein (MCP) signalling domain
Single cache domain 3
PAS fold
Cache domain
8.30E-74
3.00E-44
2.70E-30
1.30E-12
4.60E-09
WP_011368279.1 2433932 2432768 - 387PF00149
PF12850
Metallophos
Metallophos_2
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase superfamily domain
5.30E-09
1.20E-07
WP_011368280.1 2434803 2433975 - 275PF00881
PF00037
PF12837
PF13187
PF12838
Nitroreductase
Fer4
Fer4_6
Fer4_9
Fer4_7
Nitroreductase family
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
2.00E-31
1.30E-07
8.70E-07
9.80E-07
2.30E-06
WP_011368281.1 2435065 2437369 + 767NO PFAM MATCH---
WP_158303370.1 2437533 2439387 + 617PF01973MptE-like6-hydroxymethylpterin diphosphokinase MptE-like8.90E-33
WP_011368283.1 2439634 2439934 + 99PF01910
PF07615
Thiamine_BP
Ykof
Thiamine-binding protein
YKOF-related Family
2.40E-28
9.50E-04

Results for WP_011370688.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_011368221.1 [Oleidesulfovibrio alaskensis G20] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011368212.1 2357822 2357183 - 212PF02223
PF13401
Thymidylate_kin
AAA_22
Thymidylate kinase
AAA domain
1.10E-49
1.40E-04
WP_041277233.1 2358835 2357797 - 345PF01966
PF01336
PF07514
HD
tRNA_anti-codon
TraI_2
HD domain
OB-fold nucleic acid binding domain
Putative helicase
1.80E-15
2.40E-07
1.50E-05
WP_011368214.1 2359129 2359909 + 259PF01975SurESurvival protein SurE9.30E-60
WP_011368215.1 2360121 2361045 + 307PF01116F_bP_aldolaseFructose-bisphosphate aldolase class-II3.70E-106
WP_011368216.1 2361057 2362059 + 333PF02800
PF00044
Gp_dh_C
Gp_dh_N
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
9.50E-63
1.90E-27
WP_011368217.1 2363431 2362135 - 431PF08668
PF00563
HDOD
EAL
HDOD domain
EAL domain
6.10E-13
6.70E-11
WP_011368218.1 2365174 2363626 - 515PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
2.80E-19
4.70E-13
WP_027181214.1 2365564 2365201 - 120PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger3.20E-14
WP_011368221.1 2367004 2368753 + 582PF02624
PF00515
PF07719
PF13432
PF13424
YcaO
TPR_1
TPR_2
TPR_16
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.30E-64
1.60E-11
9.90E-11
3.10E-08
1.20E-07
WP_011368222.1 2368975 2369116 + 46NO PFAM MATCH---
WP_011368223.1 2369393 2369960 + 188PF17937
PF00440
TetR_C_28
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
3.90E-22
5.20E-14
WP_011368224.1 2369956 2370301 + 114PF00893Multi_Drug_ResSmall Multidrug Resistance protein6.20E-26
WP_041276887.1 2373107 2370470 - 878PF13174
PF07719
PF14559
PF13432
TPR_6
TPR_2
TPR_19
TPR_16
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.30E-06
1.50E-05
1.60E-04
4.90E-04
WP_011368226.1 2373144 2373507 + 120PF02391MoaEMoaE protein1.80E-09
WP_011368227.1 2376936 2373603 - 1110PF00128
PF16657
Alpha-amylase
Malt_amylase_C
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
1.30E-78
1.10E-25
WP_158303369.1 2377218 2377608 + 129PF00565SNaseStaphylococcal nuclease homologue6.90E-10
WP_011368229.1 2377724 2379122 + 465PF00158
PF00072
PF14532
PF02954
PF07728
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
5.00E-65
2.10E-27
5.90E-20
3.30E-10
1.90E-08

Results for WP_011357618.1 [Pelodictyon luteolum DSM 273] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011357612.1 996331 998506 + 724PF03412
PF00005
PF00664
PF12385
PF02463
Peptidase_C39
ABC_tran
ABC_membrane
Peptidase_C70
SMC_N
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
Papain-like cysteine protease AvrRpt2
RecF/RecN/SMC N terminal domain
9.50E-37
1.40E-31
4.40E-27
2.80E-05
6.70E-05
WP_011357613.1 998508 1000734 + 741PF00005
PF00664
PF02463
ABC_tran
ABC_membrane
SMC_N
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
6.20E-29
5.00E-26
2.40E-06
WP_011357614.1 1000752 1001748 + 331NO PFAM MATCH---
WP_011357615.1 1001748 1002009 + 86PF07862Nif11Nif11 domain6.80E-12
WP_049752355.1 1002205 1002499 + 97PF02979NHase_alphaNitrile hydratase, alpha chain1.30E-07
WP_081423677.1 1003110 1002603 - 168PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)3.90E-09
WP_011357616.1 1004870 1003454 - 471PF00881
PF18679
Nitroreductase
HTH_57
Nitroreductase family
ThcOx helix turn helix domain
2.60E-12
1.20E-11
WP_049752356.1 1006030 1004902 - 375PF04072LCMLeucine carboxyl methyltransferase1.00E-40
WP_011357618.1 1008279 1006029 - 749PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-92
WP_041463806.1 1008576 1008861 + 94PF02979NHase_alphaNitrile hydratase, alpha chain2.40E-07
WP_238974624.1 1009278 1008975 - 100NO PFAM MATCH---
WP_011357621.1 1009394 1009634 + 79PF07862Nif11Nif11 domain2.10E-15
WP_011357622.1 1009780 1010800 + 339PF00583
PF13673
Acetyltransf_1
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
1.10E-08
1.50E-05
WP_011357623.1 1010887 1011172 + 94PF07862Nif11Nif11 domain7.30E-14
WP_238974625.1 1011582 1011273 - 102NO PFAM MATCH---
WP_011357625.1 1011698 1011905 + 68PF07862Nif11Nif11 domain1.40E-15
WP_011357626.1 1012291 1012006 - 94NO PFAM MATCH---

Results for WP_011326805.1 [Pseudoalteromonas translucida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011326797.1 74143 74509 + 121PF09685DUF4870Domain of unknown function (DUF4870)3.50E-41
WP_011326798.1 74592 75027 + 144PF09335SNARE_assocSNARE associated Golgi protein1.60E-14
WP_011326799.1 75422 75065 - 118PF02152FolBDihydroneopterin aldolase6.20E-27
WP_011326800.1 75980 75425 - 184PF01227GTP_cyclohydroIGTP cyclohydrolase I4.20E-77
WP_011326801.1 76726 76006 - 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
4.10E-26
3.50E-23
7.20E-08
7.90E-05
WP_011326802.1 77686 76849 - 278PF02540NAD_synthaseNAD synthase1.60E-61
WP_011326803.1 78389 77759 - 209PF04337DUF480Protein of unknown function, DUF4801.30E-58
WP_011326804.1 81793 78430 - 1120PF02518
PF00072
PF00512
PF03924
PF08447
HATPase_c
Response_reg
HisKA
CHASE
PAS_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
PAS fold
9.70E-31
8.70E-26
2.50E-19
5.40E-17
1.00E-05
WP_011326805.1 83671 81910 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-79
1.10E-56
WP_011326806.1 83827 86161 + 777PF01804Penicil_amidasePenicillin amidase4.90E-123
WP_011326807.1 86305 87157 + 283PF00753Lactamase_BMetallo-beta-lactamase superfamily2.80E-10
WP_011326808.1 87245 88817 + 523PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
4.10E-32
1.20E-04
WP_041454308.1 88943 89261 + 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein4.20E-21
WP_179807257.1 90209 89330 - 292PF00892EamAEamA-like transporter family2.30E-11
WP_011326811.1 90431 90815 + 127PF01124MAPEGMAPEG family1.00E-18
WP_011326812.1 91541 90851 - 229PF00849
PF01479
PseudoU_synth_2
S4
RNA pseudouridylate synthase
S4 domain
7.70E-13
5.00E-10
WP_011326814.1 91720 92131 + 136PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-07
4.40E-07
2.50E-05

Results for WP_011334975.1 [Pseudomonas fluorescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011334980.1 214465 215560 + 364PF00005ABC_tranABC transporter1.70E-25
WP_007951488.1 215559 216672 + 370PF00005
PF17912
PF08402
PF13555
ABC_tran
OB_MalK
TOBE_2
AAA_29
ABC transporter
MalK OB fold domain
TOBE domain
P-loop containing region of AAA domain
1.50E-21
2.20E-07
3.50E-07
2.60E-05
WP_007951487.1 216668 217535 + 288PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.80E-14
WP_011334979.1 217544 218345 + 266PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-09
WP_039767461.1 218355 218628 + 90PF09928DUF2160Predicted small integral membrane protein (DUF2160)6.10E-37
WP_011334978.1 218675 220418 + 580NO PFAM MATCH---
WP_011334977.1 221340 220461 - 292PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
4.00E-19
1.60E-09
1.60E-07
WP_011334976.1 222287 221336 - 316PF13649
PF13847
PF08241
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.30E-10
2.10E-08
1.10E-07
2.30E-05
WP_011334975.1 223507 222283 - 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.40E-30
WP_146615298.1 223886 223556 - 109NO PFAM MATCH---
WP_011334973.1 225465 224055 - 469PF02518
PF00512
PF00672
PF14501
HATPase_c
HisKA
HAMP
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
GHKL domain
1.30E-21
2.40E-11
8.20E-10
1.30E-04
WP_007951475.1 226136 225461 - 224PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.00E-28
7.70E-27
WP_011334972.1 226545 227793 + 415PF02321OEPOuter membrane efflux protein8.60E-51
WP_011334971.1 227842 229036 + 397PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
3.60E-42
2.00E-23
2.00E-06
WP_011334970.1 229051 232204 + 1050PF00873ACR_tranAcrB/AcrD/AcrF family0.00E+00
WP_041475587.1 232339 232540 + 66NO PFAM MATCH---
WP_011334968.1 232618 232951 + 110PF10976DUF2790Protein of unknown function (DUF2790)2.90E-26

Results for WP_011334123.1 [Pseudomonas fluorescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011334115.1 244178 242846 - 443PF02518
PF00672
PF00512
HATPase_c
HAMP
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
His Kinase A (phospho-acceptor) domain
6.80E-20
6.70E-09
1.60E-05
WP_011334116.1 244900 244174 - 241PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
6.30E-28
3.50E-22
WP_011334117.1 245049 245361 + 103NO PFAM MATCH---
WP_011334118.1 245378 246059 + 226PF11769DUF3313Protein of unknown function (DUF3313)2.30E-45
WP_011334119.1 246110 247517 + 468PF03841
PF12390
PF00266
PF01041
SelA
Se-cys_synth_N
Aminotran_5
DegT_DnrJ_EryC1
L-seryl-tRNA selenium transferase
Selenocysteine synthase N terminal
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
1.60E-165
3.10E-08
4.00E-04
8.00E-04
WP_007951395.1 247513 249424 + 637INFERRED GENE---
WP_041475271.1 250817 249533 - 427PF03573OprDouter membrane porin, OprD family9.80E-136
WP_011334122.1 253538 250916 - 873PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
7.50E-71
7.90E-48
2.50E-13
8.80E-10
5.20E-07
WP_011334123.1 253716 255912 + 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.70E-73
5.10E-71
8.70E-09
WP_041475272.1 257280 255981 - 432PF04966OprBCarbohydrate-selective porin, OprB family1.70E-82
WP_262415191.1 259728 257364 - 787PF01011
PF13360
PQQ
PQQ_2
PQQ enzyme repeat
PQQ-like domain
2.90E-43
8.10E-17
WP_011334126.1 260054 261026 + 323PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.40E-38
4.10E-17
WP_011334127.1 262249 261097 - 383PF03022
PF08450
PF01436
MRJP
SGL
NHL
Major royal jelly protein
SMP-30/Gluconolactonase/LRE-like region
NHL repeat
3.50E-33
2.50E-06
7.40E-04
WP_011334128.1 263226 262461 - 254PF00106
PF13561
PF08659
PF01370
PF13460
adh_short
adh_short_C2
KR
Epimerase
NAD_binding_10
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
2.30E-42
2.90E-27
2.00E-12
4.30E-06
4.20E-04
WP_011334129.1 264047 263249 - 265PF00106
PF13561
PF08659
PF01370
PF13460
adh_short
adh_short_C2
KR
Epimerase
NAD_binding_10
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
8.90E-44
1.20E-30
3.30E-13
1.10E-04
1.10E-04
WP_011334130.1 264152 265130 + 325PF12833
PF01965
PF00165
HTH_18
DJ-1_PfpI
HTH_AraC
Helix-turn-helix domain
DJ-1/PfpI family
Bacterial regulatory helix-turn-helix proteins, AraC family
3.90E-18
3.40E-15
1.20E-12
WP_011334131.1 266169 265146 - 340PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
1.40E-29
3.00E-28

Results for WP_011288940.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_011288660.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_011305848.1 [Methanosarcina barkeri str. Wiesmoor] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011305856.1 185850 186348 + 165PF17253DUF5320Family of unknown function (DUF5320)4.70E-23
WP_011305855.1 186525 187506 + 326PF04055Radical_SAMRadical SAM superfamily1.20E-14
WP_011305854.1 188227 187732 - 164PF00210FerritinFerritin-like domain4.80E-43
WP_011305853.1 188770 188272 - 165PF00582UspUniversal stress protein family8.40E-30
WP_011305852.1 189770 189275 - 164PF00582UspUniversal stress protein family7.50E-35
WP_011305851.1 190058 191042 + 327NO PFAM MATCH---
WP_011305850.1 191038 191296 + 85NO PFAM MATCH---
WP_048102599.1 192074 191402 - 223PF07812TfuATfuA-like protein1.10E-46
WP_011305848.1 193333 192058 - 424PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-87
WP_011305847.1 193626 193905 + 92PF11127DUF2892Protein of unknown function (DUF2892)3.50E-11
WP_011305846.1 194513 194750 + 78NO PFAM MATCH---
WP_230670083.1 196164 198195 + 676PF00122
PF00702
PF08282
E1-E2_ATPase
Hydrolase
Hydrolase_3
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
4.00E-54
7.00E-40
2.90E-06
WP_011305844.1 198618 198399 - 72PF13396PLDc_NPhospholipase_D-nuclease N-terminal1.90E-09
WP_196298059.1 198868 199030 + 53NO PFAM MATCH---
WP_076611181.1 199025 199139 + 38INFERRED GENE---
WP_196298015.1 199700 200378 + 225PF13185
PF01590
GAF_2
GAF
GAF domain
GAF domain
5.20E-11
6.50E-04
WP_011305842.1 200684 203441 + 918PF07568
PF13185
PF08447
PF08448
PF01590
HisKA_2
GAF_2
PAS_3
PAS_4
GAF
Histidine kinase
GAF domain
PAS fold
PAS fold
GAF domain
3.70E-32
1.20E-28
3.80E-20
1.20E-17
4.80E-17

Results for WP_011042581.1 [Colwellia psychrerythraea 34H] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049757799.1 1792190 1792946 + 251PF08238Sel1Sel1 repeat2.10E-14
WP_011042573.1 1793771 1793015 - 251PF12146
PF01738
PF00561
PF00326
Hydrolase_4
DLH
Abhydrolase_1
Peptidase_S9
Serine aminopeptidase, S33
Dienelactone hydrolase family
alpha/beta hydrolase fold
Prolyl oligopeptidase family
5.80E-12
4.40E-08
8.80E-06
2.90E-05
WP_011042574.1 1795593 1794174 - 472PF02518
PF00512
PF00672
HATPase_c
HisKA
HAMP
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
1.70E-22
1.20E-12
2.10E-10
WP_011042575.1 1796324 1795595 - 242PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
2.50E-26
7.30E-16
WP_011042576.1 1796528 1796987 + 152PF07813
PF13801
PF20178
LTXXQ
Metal_resist
DUF6543
LTXXQ motif family protein
Heavy-metal resistance
Family of unknown function (DUF6543)
2.80E-09
6.90E-08
3.20E-04
WP_011042577.1 1797614 1797083 - 176PF00156
PF14681
Pribosyltran
UPRTase
Phosphoribosyl transferase domain
Uracil phosphoribosyltransferase
2.20E-26
1.30E-06
WP_011042578.1 1799188 1797739 - 482PF00860Xan_ur_permeasePermease family4.40E-48
WP_011042579.1 1799870 1801481 + 536PF00916
PF01740
Sulfate_transp
STAS
Sulfate permease family
STAS domain
4.70E-76
7.70E-11
WP_011042581.1 1801738 1803925 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.80E-72
4.70E-72
1.30E-08
WP_041736800.1 1804258 1805536 + 425PF00990
PF11845
GGDEF
DUF3365
Diguanylate cyclase, GGDEF domain
Protein of unknown function (DUF3365)
9.80E-42
5.20E-16
WP_011042583.1 1805640 1807506 + 621PF01391CollagenCollagen triple helix repeat (20 copies)3.70E-04
WP_011042586.1 1808158 1809763 + 534PF00999
PF02254
Na_H_Exchanger
TrkA_N
Sodium/hydrogen exchanger family
TrkA-N domain
4.30E-50
8.60E-14
WP_011042588.1 1810085 1811060 + 324PF03783CsgGCurli production assembly/transport component CsgG3.00E-28
WP_011042589.1 1811078 1811396 + 105NO PFAM MATCH---
WP_011042590.1 1811436 1811787 + 116PF16068
PF00515
PF07719
PF13176
DUF4810
TPR_1
TPR_2
TPR_7
Domain of unknown function (DUF4810)
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.10E-21
9.50E-05
1.40E-04
3.40E-04
WP_011042591.1 1811901 1812510 + 202PF05643DUF799Putative bacterial lipoprotein (DUF799)7.00E-36
WP_011042593.1 1812993 1813869 + 291PF05368
PF13460
PF01488
PF01073
PF03435
NmrA
NAD_binding_10
Shikimate_DH
3Beta_HSD
Sacchrp_dh_NADP
NmrA-like family
NAD(P)H-binding
Shikimate / quinate 5-dehydrogenase
3-beta hydroxysteroid dehydrogenase/isomerase family
Saccharopine dehydrogenase NADP binding domain
3.00E-23
2.40E-18
1.70E-04
1.90E-04
3.80E-04

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011277428.1 back to top

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Couldn't process WP_011277428.1 Genbank filestream. May be corrupt.

Results for WP_011061075.1 back to top

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Couldn't process WP_011061075.1 Genbank filestream. May be corrupt.

Results for WP_005687300.1 back to top

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Couldn't process WP_005687300.1 Genbank filestream. May be corrupt.

Results for WP_010870606.1 [Methanocaldococcus jannaschii DSM 2661] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010870598.1 1025156 1026179 + 340PF01909NTP_transf_2Nucleotidyltransferase domain5.30E-08
WP_010870599.1 1026192 1027131 + 312PF00288
PF08544
GHMP_kinases_N
GHMP_kinases_C
GHMP kinases N terminal domain
GHMP kinases C terminal
1.00E-14
2.80E-14
WP_010870600.1 1027972 1027132 - 279PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
2.30E-35
5.90E-14
1.00E-08
WP_064496721.1 1028779 1027981 - 265PF02361CbiQCobalt transport protein8.90E-63
WP_010870602.1 1029116 1028828 - 95PF02553CbiNCobalt transport protein component CbiN5.10E-28
WP_010870603.1 1029818 1029116 - 233PF01891CbiMCobalt uptake substrate-specific transmembrane region3.10E-55
WP_010870604.1 1030099 1030744 + 214PF03824
PF13386
PF09930
NicO
DsbD_2
DUF2162
High-affinity nickel-transport protein
Cytochrome C biogenesis protein transmembrane region
Predicted transporter (DUF2162)
2.90E-13
2.40E-09
2.50E-08
WP_010870605.1 1030875 1031778 + 300PF04055Radical_SAMRadical SAM superfamily1.10E-18
WP_010870606.1 1033049 1031891 - 385PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-76
WP_064496722.1 1034345 1033082 - 420PF08489
PF01336
DUF1743
tRNA_anti-codon
Domain of unknown function (DUF1743)
OB-fold nucleic acid binding domain
2.00E-41
1.30E-08
WP_010870608.1 1036873 1035847 - 341PF01118
PF02774
PF01408
Semialdhyde_dh
Semialdhyde_dhC
GFO_IDH_MocA
Semialdehyde dehydrogenase, NAD binding domain
Semialdehyde dehydrogenase, dimerisation domain
Oxidoreductase family, NAD-binding Rossmann fold
1.10E-35
2.00E-31
4.10E-04
WP_064496723.1 1038504 1037196 - 435PF02784
PF00278
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Pyridoxal-dependent decarboxylase, pyridoxal binding domain
Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2.90E-61
2.00E-25
WP_010870610.1 1039386 1038621 - 254PF03161
PF14527
LAGLIDADG_2
LAGLIDADG_WhiA
LAGLIDADG DNA endonuclease family
WhiA LAGLIDADG-like domain
1.10E-34
5.30E-04
WP_010870611.1 1040321 1039613 - 235PF044764HFCP_synth4-HFC-P synthase8.10E-92
WP_010870612.1 1040526 1041873 + 448PF02878
PF02880
PF02879
PF00408
PGM_PMM_I
PGM_PMM_III
PGM_PMM_II
PGM_PMM_IV
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Phosphoglucomutase/phosphomannomutase, C-terminal domain
5.20E-36
8.00E-25
9.70E-20
2.40E-13
WP_010870613.1 1041900 1043127 + 408PF00483
PF00132
PF12804
PF01128
NTP_transferase
Hexapep
NTP_transf_3
IspD
Nucleotidyl transferase
Bacterial transferase hexapeptide (six repeats)
MobA-like NTP transferase domain
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
1.60E-44
7.80E-16
7.40E-13
1.20E-04
WP_064496724.1 1043243 1043714 + 156PF00692
PF06559
dUTPase
DCD
dUTPase
2'-deoxycytidine 5'-triphosphate deaminase (DCD)
1.30E-09
4.80E-04

Results for WP_011237441.1 [Aromatoleum aromaticum EbN1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011237433.1 1692934 1691281 - 550PF14849
PF02096
YidC_periplas
60KD_IMP
YidC periplasmic domain
60Kd inner membrane protein
1.20E-89
4.90E-61
WP_011237434.1 1693170 1692960 - 69PF01809YidDPutative membrane protein insertion efficiency factor1.50E-30
WP_241762829.1 1693562 1693169 - 130PF00825Ribonuclease_PRibonuclease P6.00E-23
WP_002926183.1 1693665 1693530 - 44PF00468Ribosomal_L34Ribosomal protein L344.00E-23
WP_011237436.1 1693959 1695405 + 481PF00308
PF08299
PF11638
PF01695
PF00004
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
Bacterial dnaA protein
Bacterial dnaA protein helix-turn-helix
DnaA N-terminal domain
IstB-like ATP binding protein
ATPase family associated with various cellular activities (AAA)
1.00E-87
3.40E-32
8.80E-18
2.50E-09
3.80E-05
WP_011237437.1 1695486 1696590 + 367PF00712
PF02767
PF02768
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA polymerase III beta subunit, N-terminal domain
DNA polymerase III beta subunit, central domain
DNA polymerase III beta subunit, C-terminal domain
5.60E-40
1.80E-38
9.20E-36
WP_011237438.1 1696671 1699167 + 831PF00204
PF18053
PF00986
PF02518
PF01751
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
DNA gyrase B
DNA gyrase B subunit insert domain
DNA gyrase B subunit, carboxyl terminus
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Toprim domain
1.60E-57
4.80E-41
3.20E-30
1.20E-19
4.00E-19
WP_041646018.1 1699614 1699392 - 73NO PFAM MATCH---
WP_011237441.1 1702188 1699983 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.70E-72
1.90E-72
1.10E-07
WP_085938654.1 1702641 1704212 + 523PF00665
PF13683
PF01527
PF13565
PF13384
rve
rve_3
HTH_Tnp_1
HTH_32
HTH_23
Integrase core domain
Integrase core domain
Transposase
Homeodomain-like domain
Homeodomain-like domain
6.50E-18
7.90E-15
2.70E-10
4.50E-08
4.10E-06
WP_011237447.1 1704950 1704716 - 77NO PFAM MATCH---
WP_011237448.1 1705473 1705032 - 146NO PFAM MATCH---
WP_011237449.1 1706224 1705543 - 226NO PFAM MATCH---
WP_011237450.1 1706872 1706359 - 170NO PFAM MATCH---
WP_011237451.1 1707513 1706886 - 208PF13091PLDc_2PLD-like domain1.40E-05
WP_011237453.1 1708609 1708039 - 189PF00313
PF05901
CSD
Excalibur
'Cold-shock' DNA-binding domain
Excalibur calcium-binding domain
1.40E-12
1.00E-07
WP_007209919.1 1708882 1708969 + 29INFERRED GENE---

Results for WP_011235408.1 [Idiomarina loihiensis GSL 199] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011235400.1 2319464 2317544 - 639NO PFAM MATCH---
WP_011235401.1 2319632 2320121 + 162PF06127Mpo1-like2-hydroxy-palmitic acid dioxygenase Mpo1-like3.00E-27
WP_011235402.1 2320117 2321389 + 423PF00924MS_channelMechanosensitive ion channel6.90E-47
WP_011235403.1 2321480 2323175 + 564PF09423
PF16655
PF10518
PF16656
PhoD
PhoD_N
TAT_signal
Pur_ac_phosph_N
PhoD-like phosphatase
PhoD-like phosphatase, N-terminal domain
TAT (twin-arginine translocation) pathway signal sequence
Purple acid Phosphatase, N-terminal domain
5.80E-122
5.30E-31
1.50E-05
3.10E-05
WP_011235404.1 2325599 2323241 - 785PF00593
PF07715
PF14905
PF11854
TonB_dep_Rec
Plug
OMP_b-brl_3
MtrB_PioB
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
Putative outer membrane beta-barrel porin, MtrB/PioB
2.50E-34
6.60E-14
8.80E-06
1.20E-05
WP_011235405.1 2325789 2326629 + 279PF20434
PF07859
PF12146
PF00561
PF12697
BD-FAE
Abhydrolase_3
Hydrolase_4
Abhydrolase_1
Abhydrolase_6
BD-FAE
alpha/beta hydrolase fold
Serine aminopeptidase, S33
alpha/beta hydrolase fold
Alpha/beta hydrolase family
2.40E-29
4.80E-14
1.10E-12
1.50E-09
2.40E-08
WP_011235406.1 2326625 2327873 + 415PF00266
PF01053
Aminotran_5
Cys_Met_Meta_PP
Aminotransferase class-V
Cys/Met metabolism PLP-dependent enzyme
6.70E-22
5.20E-05
WP_011235407.1 2329353 2327943 - 469PF06097DUF945Bacterial protein of unknown function (DUF945)1.90E-95
WP_011235408.1 2329554 2331738 + 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.00E-76
1.20E-73
4.30E-10
WP_011235409.1 2332691 2331740 - 316PF13519
PF18595
PF13768
PF06818
VWA_2
Nuf2_DHR10-like
VWA_3
Fez1
von Willebrand factor type A domain
Nuf2, DHR10-like domain
von Willebrand factor type A domain
Fez1
3.10E-06
3.20E-04
5.50E-04
6.70E-04
WP_011235410.1 2333749 2332690 - 352PF13519VWA_2von Willebrand factor type A domain1.10E-06
WP_011235411.1 2334533 2333762 - 256PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family1.30E-18
WP_016341393.1 2336653 2334670 - 660PF03781
PF08308
PF13620
PF13715
FGE-sulfatase
PEGA
CarboxypepD_reg
CarbopepD_reg_2
Sulfatase-modifying factor enzyme 1
PEGA domain
Carboxypeptidase regulatory-like domain
CarboxypepD_reg-like domain
2.40E-35
6.10E-32
1.60E-06
1.40E-04
WP_011235414.1 2338129 2336695 - 477NO PFAM MATCH---
WP_011235415.1 2339434 2338150 - 427NO PFAM MATCH---
WP_016341394.1 2339993 2339453 - 179NO PFAM MATCH---
WP_041291785.1 2341026 2340120 - 301PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.60E-29
6.50E-17

Results for WP_011223368.1 [Haloarcula marismortui ATCC 43049] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 462478 462331 - 48NO PFAM MATCH---
WP_011223363.1 462537 463257 + 239NO PFAM MATCH---
WP_011223364.1 463743 463260 - 160PF00293NUDIXNUDIX domain9.60E-13
WP_011223365.1 464637 463743 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.40E-67
1.20E-35
WP_011223366.1 465303 464712 - 196NO PFAM MATCH---
WP_004961161.1 466626 465378 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
1.50E-150
7.40E-07
WP_011223367.1 466779 468867 + 695NO PFAM MATCH---
WP_004961158.1 469245 470064 + 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_011223368.1 470095 471805 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-47
WP_004961153.1 472969 471820 - 382PF01889DUF63Membrane protein of unknown function DUF632.90E-34
WP_011223369.1 473912 473072 - 279PF00459Inositol_PInositol monophosphatase family3.60E-47
WP_049938845.1 474184 473983 - 66NO PFAM MATCH---
WP_049938846.1 474751 474553 - 65NO PFAM MATCH---
WP_011223373.1 475549 475336 - 70NO PFAM MATCH---
WP_232508557.1 476276 477305 + 342PF16363
PF01370
PF01073
PF02719
PF07993
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
Polysaccharide biosynthesis protein
Male sterility protein
1.90E-69
9.60E-49
3.90E-14
1.70E-13
1.80E-11
WP_232508558.1 477301 478279 + 325PF01370
PF16363
PF04321
PF02719
PF01073
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
RmlD substrate binding domain
Polysaccharide biosynthesis protein
3-beta hydroxysteroid dehydrogenase/isomerase family
1.30E-58
3.40E-32
3.20E-07
3.40E-06
5.60E-06
WP_011223376.1 478562 478703 + 46NO PFAM MATCH---

Results for WP_011212600.1 [Legionella pneumophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011212608.1 21822 21105 - 238PF06586TraKTraK protein3.70E-47
WP_042236052.1 22384 21814 - 189PF05309TraETraE protein3.80E-55
WP_227000277.1 22681 22393 - 95PF07178TraLTraL protein1.20E-25
WP_011212605.1 22990 22702 - 95NO PFAM MATCH---
WP_011212604.1 23856 23109 - 248PF05818TraTEnterobacterial TraT complement resistance protein1.30E-73
WP_080282142.1 24148 23989 - 52PF02599CsrAGlobal regulator protein family7.90E-10
WP_011212602.1 24390 24204 - 61NO PFAM MATCH---
WP_042236054.1 25537 24502 - 344PF07812TfuATfuA-like protein9.90E-36
WP_011212600.1 26591 25529 - 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-36
WP_011212599.1 27610 26587 - 340PF00899
PF03721
ThiF
UDPG_MGDP_dh_N
ThiF family
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
1.20E-49
7.10E-04
WP_011212598.1 27866 27614 - 83PF02597ThiSThiS family5.20E-05
WP_011212597.1 29177 28013 - 387PF13535ATP-grasp_4ATP-grasp domain4.80E-08
WP_011212596.1 30411 29148 - 420NO PFAM MATCH---
WP_042236057.1 30809 31832 + 340PF01978
PF01022
TrmB
HTH_5
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory protein, arsR family
1.50E-04
3.50E-04
WP_011212594.1 33288 31833 - 484PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
2.50E-29
6.90E-20
WP_011212593.1 34974 33576 - 465NO PFAM MATCH---
WP_106184466.1 36004 34987 - 338PF13614
PF06564
PF01656
PF09140
PF10609
AAA_31
CBP_BcsQ
CbiA
MipZ
ParA
AAA domain
Cellulose biosynthesis protein BcsQ
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
NUBPL iron-transfer P-loop NTPase
7.40E-38
5.00E-13
9.50E-13
3.50E-08
1.20E-06

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for YP_107229.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_000192963.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195383.1 3142150 3141880 - 89NO PFAM MATCH---
WP_001036564.1 3142528 3142168 - 119NO PFAM MATCH---
WP_001178301.1 3142845 3142662 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109889.1 3143251 3142873 - 125NO PFAM MATCH---
WP_000428510.1 3143463 3143253 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197164.1 3144289 3147157 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.00E-55
5.00E-37
WP_000569897.1 3147290 3148550 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.80E-81
3.40E-20
3.70E-13
1.60E-04
WP_000067630.1 3148674 3150594 + 639NO PFAM MATCH---
WP_000192963.1 3150590 3152540 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.50E-82
WP_001175523.1 3152556 3154098 + 513PF00881NitroreductaseNitroreductase family1.60E-12
WP_000025744.1 3154189 3154780 + 196PF08241
PF13649
PF13847
PF08242
PF13489
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
6.80E-17
8.90E-17
8.10E-15
3.70E-11
1.60E-10
WP_000996786.1 3155223 3154812 - 136PF13048DUF3908Protein of unknown function (DUF3908)4.20E-54
WP_000469235.1 3155859 3155367 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
6.60E-10
1.60E-06
2.50E-04
WP_001110210.1 3157294 3155959 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.20E-65
8.20E-21
3.00E-17
2.10E-15
2.10E-10
WP_000332391.1 3157491 3157923 + 143NO PFAM MATCH---
WP_017672808.1 3157967 3158194 + 75INFERRED GENE---
WP_000649869.1 3159044 3158270 - 257PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
9.20E-05
1.70E-04

Results for WP_003180177.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011200121.1 [[Mannheimia] succiniciproducens MBEL55E] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041639671.1 911711 912689 + 325PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase9.90E-115
WP_011200111.1 912678 912864 + 61PF03966Trm112pTrm112p-like protein3.50E-08
WP_011200112.1 912860 913640 + 259PF02348
PF12804
CTP_transf_3
NTP_transf_3
Cytidylyltransferase
MobA-like NTP transferase domain
2.20E-70
1.90E-10
WP_011200113.1 913658 914303 + 214PF20159
PF06078
YidB
DUF937
YidB-like protein
Bacterial protein of unknown function (DUF937)
2.50E-26
2.30E-06
WP_011200114.1 914392 916219 + 608PF08459
PF01541
PF02151
PF00633
PF14520
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
UvrC RNAse H endonuclease domain
GIY-YIG catalytic domain
UvrB/uvrC motif
Helix-hairpin-helix motif
Helix-hairpin-helix domain
6.60E-48
9.00E-11
4.40E-10
7.50E-08
6.10E-06
WP_041639673.1 917108 916283 - 274PF14743
PF01068
PF09414
DNA_ligase_OB_2
DNA_ligase_A_M
RNA_ligase
DNA ligase OB-like domain
ATP dependent DNA ligase domain
RNA ligase
3.40E-25
1.50E-11
2.30E-06
WP_011200118.1 917369 918518 + 382PF01717Meth_synt_2Cobalamin-independent synthase, Catalytic domain1.10E-11
WP_011200120.1 919491 918627 - 287PF05661DUF808Protein of unknown function (DUF808)1.70E-100
WP_011200121.1 921325 919564 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.50E-75
8.60E-62
WP_011200122.1 922102 921388 - 237PF08241Methyltransf_11Methyltransferase domain1.20E-07
WP_011200123.1 922131 922842 + 236PF00753
PF16123
PF12706
Lactamase_B
HAGH_C
Lactamase_B_2
Metallo-beta-lactamase superfamily
Hydroxyacylglutathione hydrolase C-terminus
Beta-lactamase superfamily domain
3.10E-14
3.50E-14
1.90E-06
WP_011200124.1 922894 923782 + 295PF04261Dyp_peroxDyp-type peroxidase family2.40E-90
WP_011200125.1 924737 923876 - 286PF02551
PF13622
Acyl_CoA_thio
4HBT_3
Acyl-CoA thioesterase
Thioesterase-like superfamily
6.80E-62
6.50E-52
WP_011200126.1 926728 924997 - 576PF00005
PF00664
PF13304
PF02463
PF01935
ABC_tran
ABC_membrane
AAA_21
SMC_N
DUF87
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Helicase HerA, central domain
7.50E-31
7.60E-17
4.80E-08
9.10E-07
1.60E-04
WP_011200127.1 928532 926771 - 586PF00664
PF00005
PF02463
PF13304
PF03193
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
6.50E-40
2.70E-28
4.60E-07
6.90E-06
1.30E-05
WP_011200128.1 929591 928634 - 318PF07992
PF13738
PF00070
PF00890
PF01134
Pyr_redox_2
Pyr_redox_3
Pyr_redox
FAD_binding_2
GIDA
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Glucose inhibited division protein A
1.20E-49
5.10E-19
2.10E-18
8.50E-09
6.30E-05
WP_041639674.1 930518 929657 - 286PF14561
PF14559
PF00085
PF12895
PF11817
TPR_20
TPR_19
Thioredoxin
ANAPC3
Foie-gras_1
Tetratricopeptide repeat
Tetratricopeptide repeat
Thioredoxin
Anaphase-promoting complex, cyclosome, subunit 3
Foie gras liver health family 1
1.20E-30
7.10E-18
8.80E-13
1.00E-05
1.80E-04

Results for WP_002211330.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011183761.1 back to top

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Couldn't process WP_011183761.1 Genbank filestream. May be corrupt.

Results for YP_035490.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_011190264.1 [Desulfotalea psychrophila LSv54] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011190257.1 3415117 3414328 - 262PF10418
PF00175
PF00970
DHODB_Fe-S_bind
NAD_binding_1
FAD_binding_6
Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
Oxidoreductase NAD-binding domain
Oxidoreductase FAD-binding domain
3.70E-13
3.40E-10
3.40E-06
WP_011190258.1 3415291 3416083 + 263PF06750
PF01478
DiS_P_DiS
Peptidase_A24
Bacterial Peptidase A24 N-terminal domain
Type IV leader peptidase family
4.20E-35
3.20E-22
WP_041278103.1 3416207 3416600 + 130PF030614HBTThioesterase superfamily4.70E-13
WP_011190260.1 3416710 3417286 + 191PF04191
PF04140
PEMT
ICMT
Phospholipid methyltransferase
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
5.70E-09
2.10E-06
WP_049785166.1 3417682 3418174 + 163PF07885
PF00520
Ion_trans_2
Ion_trans
Ion channel
Ion transport protein
1.00E-05
1.10E-04
WP_011190262.1 3418212 3419661 + 482PF02696SelOProtein adenylyltransferase SelO1.20E-118
WP_011190263.1 3419848 3420190 + 113NO PFAM MATCH---
WP_083819003.1 3420374 3420557 + 60NO PFAM MATCH---
WP_011190264.1 3420834 3422487 + 550PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.50E-68
2.70E-05
WP_041278105.1 3422572 3423271 + 232PF00849PseudoU_synth_2RNA pseudouridylate synthase2.30E-33
WP_041278106.1 3423748 3424696 + 315PF04055Radical_SAMRadical SAM superfamily2.40E-15
WP_041278107.1 3425917 3424978 - 312PF04055
PF13353
PF13394
PF13484
Radical_SAM
Fer4_12
Fer4_14
Fer4_16
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4Fe-4S double cluster binding domain
3.80E-25
6.70E-17
1.10E-04
7.70E-04
WP_011190268.1 3428514 3426027 - 828PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.10E-171
2.50E-26
WP_041278108.1 3430351 3428923 - 475PF00171AldedhAldehyde dehydrogenase family5.10E-23
WP_011190270.1 3430663 3430372 - 96PF03319EutN_CcmLEthanolamine utilisation protein EutN/carboxysome9.70E-22
WP_011190271.1 3430986 3430707 - 92PF00936BMCBMC domain1.20E-27
WP_023226677.1 3431109 3431370 + 87INFERRED GENE---

Results for WP_011094139.1 [Pectobacterium atrosepticum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011094147.1 728953 728644 - 102PF10109Phage_TAC_7Phage tail assembly chaperone proteins, E, or 41 or 141.30E-04
WP_011094146.1 729582 729066 - 171PF04985Phage_tubePhage tail tube protein FII2.20E-50
WP_011094145.1 730767 729582 - 394PF04984
PF17482
Phage_sheath_1
Phage_sheath_1C
Phage tail sheath protein subtilisin-like domain
Phage tail sheath C-terminal domain
5.40E-25
1.90E-09
WP_086935219.1 730914 732057 + 380PF05954Phage_GPDPhage tail baseplate hub (GPD)5.30E-28
WP_011094143.1 732093 732342 + 82PF04606Ogr_DeltaOgr/Delta-like zinc finger1.70E-18
WP_011094142.1 732774 732384 - 129NO PFAM MATCH---
WP_011094141.1 735538 733255 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.40E-206
1.50E-43
WP_011094140.1 736456 735595 - 286PF01226Form_Nir_transFormate/nitrite transporter4.00E-73
WP_011094139.1 738672 736908 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.40E-83
6.50E-67
WP_011094138.1 739064 740150 + 361PF00266Aminotran_5Aminotransferase class-V4.70E-62
WP_011094137.1 740232 741522 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.20E-149
WP_011094136.1 741742 742420 + 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.40E-81
2.10E-07
1.40E-05
8.10E-05
WP_011094135.1 742536 744210 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.30E-96
1.40E-12
1.50E-06
WP_005967571.1 744301 744586 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_043878173.1 745310 744746 - 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.10E-31
2.40E-15
WP_011094133.1 746149 745372 - 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
4.10E-74
3.00E-05
6.50E-05
WP_011094132.1 746868 746130 - 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
2.80E-78
1.90E-08
2.60E-07
4.70E-06
2.60E-05

Results for WP_011219395.1 [Photobacterium profundum SS9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011219386.1 3177076 3176398 - 225PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component9.50E-17
WP_011219387.1 3177820 3177079 - 246PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.70E-21
WP_041394460.1 3178680 3177903 - 258PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.10E-57
1.70E-09
WP_041394461.1 3179579 3178808 - 256PF00005
PF13304
PF02463
PF13555
PF09818
ABC_tran
AAA_21
SMC_N
AAA_29
ABC_ATPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
ATPase of the ABC class
7.20E-32
3.00E-10
5.80E-06
1.70E-04
4.80E-04
WP_011219390.1 3180477 3182205 + 575PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle2.20E-54
WP_011219391.1 3182530 3182236 - 97PF12840
PF01022
PF12802
PF01978
PF09339
HTH_20
HTH_5
MarR_2
TrmB
HTH_IclR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Sugar-specific transcriptional regulator TrmB
IclR helix-turn-helix domain
1.00E-12
2.60E-05
1.20E-04
5.40E-04
6.70E-04
WP_011219392.1 3184179 3182697 - 493PF03606DcuCC4-dicarboxylate anaerobic carrier4.40E-121
WP_011219393.1 3185543 3184175 - 455PF01546Peptidase_M20Peptidase family M20/M25/M406.30E-34
WP_011219395.1 3186013 3187750 + 578PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.10E-66
3.20E-53
WP_011219396.1 3188217 3189732 + 504PF11840DUF3360Protein of unknown function (DUF3360)5.70E-260
WP_011219397.1 3189945 3192222 + 758PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.70E-202
1.80E-42
WP_011219398.1 3192466 3193120 + 217NO PFAM MATCH---
WP_011219399.1 3193369 3194110 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.00E-32
3.10E-20
1.00E-06
WP_041394463.1 3195219 3194259 - 319NO PFAM MATCH---
WP_011219401.1 3195569 3196562 + 330PF03401TctCTripartite tricarboxylate transporter family receptor7.70E-25
WP_011219402.1 3196674 3197184 + 169PF07331TctBTripartite tricarboxylate transporter TctB family1.90E-15
WP_004416416.1 3197194 3198064 + 290INFERRED GENE---

Results for WP_011171000.1 [Methanococcus maripaludis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013999491.1 286457 286634 + 58NO PFAM MATCH---
WP_011170993.1 286647 286917 + 89PF04066MrpF_PhaFMultiple resistance and pH regulation protein F (MrpF / PhaF)3.50E-05
WP_181507781.1 287600 286952 - 215PF01936NYNNYN domain8.90E-25
WP_011170995.1 288471 287676 - 264PF01975SurESurvival protein SurE3.00E-53
WP_013999493.1 288804 289599 + 264PF13412
PF13545
HTH_24
HTH_Crp_2
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
2.60E-13
1.10E-04
WP_104838517.1 290528 289646 - 293PF02754CCGCysteine-rich domain1.20E-38
WP_013999495.1 291118 290563 - 184PF13183
PF13237
PF13187
PF13534
PF12838
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_7
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.40E-10
1.80E-09
5.40E-09
8.00E-09
4.70E-06
WP_119721044.1 291249 291555 + 101PF02594DUF167Uncharacterised ACR, YggU family COG18728.30E-21
WP_011171000.1 291577 292780 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-78
WP_183545849.1 292848 293817 + 322PF08349
PF04463
DUF1722
2-thiour_desulf
Protein of unknown function (DUF1722)
2-thiouracil desulfurase
1.90E-35
8.50E-33
WP_183545851.1 294041 295493 + 483PF07992
PF01266
PF03486
PF01134
PF13738
Pyr_redox_2
DAO
HI0933_like
GIDA
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Glucose inhibited division protein A
Pyridine nucleotide-disulphide oxidoreductase
1.00E-18
1.30E-11
7.70E-11
3.30E-09
1.50E-08
WP_183545853.1 295503 296934 + 476PF01406
PF09334
PF09190
PF00133
PF01921
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1f
tRNA synthetases class I (C) catalytic domain
tRNA synthetases class I (M)
DALR domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (K)
1.50E-136
6.20E-18
8.70E-11
1.30E-07
1.70E-07
WP_183545855.1 296949 297558 + 202PF01205
PF09186
UPF0029
DUF1949
Uncharacterized protein family UPF0029
Domain of unknown function (DUF1949)
4.10E-29
3.30E-10
WP_183545857.1 297588 299430 + 613PF05362Lon_CLon protease (S16) C-terminal proteolytic domain7.50E-11
WP_011171007.1 299513 301058 + 514PF00682
PF08502
HMGL-like
LeuA_dimer
HMGL-like
LeuA allosteric (dimerisation) domain
6.40E-92
2.10E-31
WP_183545859.1 301753 301189 - 187PF01928CYTHCYTH domain7.90E-34
WP_011171009.1 302184 301749 - 144PF02082
PF01022
PF13291
PF03444
PF08279
Rrf2
HTH_5
ACT_4
HrcA_DNA-bdg
HTH_11
Iron-dependent Transcriptional regulator
Bacterial regulatory protein, arsR family
ACT domain
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH domain
3.80E-08
2.50E-05
5.70E-05
2.30E-04
2.60E-04

Results for WP_010935484.1 back to top

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Couldn't process WP_010935484.1 Genbank filestream. May be corrupt.

Results for YP_011423.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_000192978.1 [Bacillus cereus group sp. Bc010] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061183650.1 87735 87465 - 89NO PFAM MATCH---
WP_061183651.1 88113 87753 - 119NO PFAM MATCH---
WP_001178301.1 88431 88248 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109914.1 88837 88459 - 125NO PFAM MATCH---
WP_000428510.1 89049 88839 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_061183171.1 89875 92743 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.10E-55
3.30E-37
WP_016716916.1 92873 94133 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.80E-81
3.40E-20
3.20E-13
1.60E-04
WP_061183172.1 94258 96178 + 639NO PFAM MATCH---
WP_000192978.1 96174 98124 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-82
WP_061183173.1 98140 99682 + 513PF00881NitroreductaseNitroreductase family8.50E-12
WP_061183174.1 100122 99711 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.30E-52
WP_270786883.1 100757 100268 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.40E-11
2.60E-07
2.30E-05
WP_061183175.1 102192 100857 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.50E-63
3.70E-20
8.10E-17
1.30E-15
3.40E-10
WP_061183176.1 102391 102814 + 140NO PFAM MATCH---
WP_061183177.1 103742 102956 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
6.80E-06
2.40E-05
6.30E-04
WP_061183178.1 103937 104771 + 277PF11667DUF3267Putative zincin peptidase6.30E-04
WP_001128607.1 105469 104785 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)9.40E-75

Results for NP_924245.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_010973151.1 [Agrobacterium fabrum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_035257290.1 81079 79846 - 410PF00480
PF13545
PF01047
ROK
HTH_Crp_2
MarR
ROK family
Crp-like helix-turn-helix domain
MarR family
1.20E-14
2.20E-04
7.80E-04
WP_010973156.1 81323 82364 + 346PF13407
PF00532
PF13377
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein-like domain
1.30E-59
1.70E-07
7.10E-04
WP_006315596.1 82444 83758 + 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component4.20E-27
WP_006315597.1 83776 84559 + 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
5.30E-30
3.30E-11
2.00E-06
1.50E-05
7.80E-05
WP_035257293.1 84995 84761 - 77NO PFAM MATCH---
WP_010973154.1 85527 85089 - 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.30E-12
2.80E-10
4.40E-07
2.00E-06
WP_010973153.1 86805 85653 - 383NO PFAM MATCH---
WP_010973152.1 87515 86801 - 237PF07812TfuATfuA-like protein6.10E-41
WP_010973151.1 88711 87514 - 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-48
WP_010973150.1 89177 88748 - 142NO PFAM MATCH---
WP_035257302.1 91138 89185 - 650PF03704BTADBacterial transcriptional activator domain2.00E-24
WP_010973148.1 91310 91802 + 163NO PFAM MATCH---
WP_035257305.1 91955 92294 + 112NO PFAM MATCH---
WP_035257308.1 92753 93668 + 304PF01261AP_endonuc_2Xylose isomerase-like TIM barrel9.90E-36
WP_010973145.1 95143 93745 - 465PF00722
PF00353
PF03935
Glyco_hydro_16
HemolysinCabind
SKN1_KRE6_Sbg1
Glycosyl hydrolases family 16
RTX calcium-binding nonapeptide repeat (4 copies)
Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1
1.10E-35
9.50E-10
1.00E-07
WP_010973144.1 95414 95897 + 160PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-term1.20E-17
WP_020811400.1 95951 96434 + 161INFERRED GENE---

Results for WP_011138381.1 [Wolinella succinogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049770619.1 1457911 1456696 - 404PF00015
PF10442
MCPsignal
FIST_C
Methyl-accepting chemotaxis protein (MCP) signalling domain
FIST C domain
1.10E-36
1.90E-14
WP_011138375.1 1458688 1458061 - 208PF08495FISTFIST N domain2.70E-11
WP_011138376.1 1460364 1458840 - 507PF00924MS_channelMechanosensitive ion channel5.10E-20
WP_011138377.1 1460845 1460356 - 162PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
1.40E-14
5.90E-07
1.60E-04
WP_011138378.1 1462312 1460866 - 481PF08245Mur_ligase_MMur ligase middle domain5.60E-21
WP_232013735.1 1462608 1462320 - 95PF00708AcylphosphataseAcylphosphatase3.10E-26
WP_014769389.1 1462626 1463307 + 227INFERRED GENE---
WP_011138380.1 1464344 1463306 - 345PF07478
PF01820
Dala_Dala_lig_C
Dala_Dala_lig_N
D-ala D-ala ligase C-terminus
D-ala D-ala ligase N-terminus
1.50E-28
1.30E-17
WP_011138381.1 1464453 1466088 + 544PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-63
1.30E-10
WP_011138382.1 1466654 1466084 - 189PF14520
PF01330
PF07499
PF00633
PF12826
HHH_5
RuvA_N
RuvA_C
HHH
HHH_2
Helix-hairpin-helix domain
RuvA N terminal domain
RuvA, C-terminal domain
Helix-hairpin-helix motif
Helix-hairpin-helix motif
2.10E-17
7.00E-17
8.00E-10
9.70E-10
2.70E-05
WP_011138383.1 1468474 1466650 - 607PF03961
PF20250
FapA
FapA_N
Flagellar Assembly Protein A beta solenoid domain
Flagellar Assembly Protein A N-terminal region
1.70E-39
9.40E-21
WP_041571697.1 1468598 1470014 + 471PF03023
PF01554
MurJ
MatE
Lipid II flippase MurJ
MatE
1.70E-111
2.00E-05
WP_011138385.1 1470014 1471418 + 467PF01406
PF09334
PF00133
PF01921
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
tRNA synthetases class I (C) catalytic domain
tRNA synthetases class I (M)
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (K)
2.00E-123
2.70E-13
3.40E-08
8.10E-06
WP_011138386.1 1471538 1471742 + 67PF01197Ribosomal_L31Ribosomal protein L315.80E-30
WP_011138387.1 1471743 1472559 + 271PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases1.70E-25
WP_041571986.1 1472605 1473298 + 230PF00588
PF08032
PF09936
SpoU_methylase
SpoU_sub_bind
Methyltrn_RNA_4
SpoU rRNA Methylase family
RNA 2'-O ribose methyltransferase substrate binding
SAM-dependent RNA methyltransferase
1.20E-31
8.20E-14
5.90E-04
WP_011138389.1 1473281 1474268 + 328NO PFAM MATCH---

Results for NP_834753.1 back to top

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No results in nuccore db for value obtained from protein db

Results for NP_831033.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_010957805.1 back to top

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Couldn't process WP_010957805.1 Genbank filestream. May be corrupt.

Results for WP_000417516.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002144925.1 41418 41652 + 78INFERRED GENE---
WP_000761986.1 41811 42552 + 246PF12146
PF00561
PF12697
PF01738
PF00326
Hydrolase_4
Abhydrolase_1
Abhydrolase_6
DLH
Peptidase_S9
Serine aminopeptidase, S33
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Dienelactone hydrolase family
Prolyl oligopeptidase family
6.00E-19
3.90E-09
9.00E-06
1.60E-05
2.40E-04
WP_000391087.1 42694 45121 + 808PF00773
PF17876
PF08206
PF00575
RNB
CSD2
OB_RNB
S1
RNB domain
Cold shock domain
Ribonuclease B OB domain
S1 RNA binding domain
2.80E-106
2.80E-38
1.10E-31
3.70E-15
WP_001123919.1 45370 45838 + 155PF01668SmpBSmpB protein3.70E-65
WP_012259899.1 46648 47354 + 235INFERRED GENE---
WP_000700654.1 47945 48860 + 304NO PFAM MATCH---
WP_001004205.1 48856 50989 + 710NO PFAM MATCH---
WP_000269750.1 50994 51651 + 218PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term7.80E-06
WP_000417516.1 51713 52967 + 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-35
WP_001105870.1 53015 53615 + 199NO PFAM MATCH---
WP_002195913.1 53619 55128 + 502NO PFAM MATCH---
WP_000276249.1 55128 55764 + 211NO PFAM MATCH---
WP_000424293.1 55789 56506 + 238PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.70E-19
2.70E-08
3.20E-07
WP_227944893.1 56607 57255 + 215PF12698ABC2_membrane_3ABC-2 family transporter protein1.20E-08
WP_265335538.1 57291 57450 + 52NO PFAM MATCH---
WP_000391899.1 57501 57663 + 53NO PFAM MATCH---
WP_001030755.1 57686 57875 + 62NO PFAM MATCH---

Results for WP_010954993.1 back to top

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Couldn't process WP_010954993.1 Genbank filestream. May be corrupt.

Results for WP_003256021.1 back to top

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Couldn't process WP_003256021.1 Genbank filestream. May be corrupt.

Results for WP_011087309.1 back to top

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Couldn't process WP_011087309.1 Genbank filestream. May be corrupt.

Results for WP_011071092.1 [Shewanella oneidensis MR-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011979499.1 1391471 1391588 + 39INFERRED GENE---
WP_011071087.1 1392407 1391804 - 200PF18933PsbP_2PsbP-like protein4.90E-04
WP_172966542.1 1393238 1392794 - 147PF04391
PF05099
DUF533
TerB
Protein of unknown function (DUF533)
Tellurite resistance protein TerB
1.40E-06
3.50E-06
WP_011071089.1 1394304 1394058 - 81PF11730DUF3297Protein of unknown function (DUF3297)2.40E-34
WP_011071090.1 1395006 1394388 - 205PF13561
PF00106
PF01370
PF08659
PF04321
adh_short_C2
adh_short
Epimerase
KR
RmlD_sub_bind
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
RmlD substrate binding domain
1.20E-12
1.70E-10
6.10E-07
4.30E-06
1.60E-05
WP_238560546.1 1395415 1396279 + 287PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.30E-32
1.90E-09
WP_011071091.1 1396535 1396925 + 129PF12614RRF_GIRibosome recycling factor6.10E-62
WP_164925620.1 1397248 1397536 + 95NO PFAM MATCH---
WP_011071092.1 1397751 1399950 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.40E-72
4.40E-71
3.50E-09
WP_011071093.1 1400935 1400026 - 302PF00990GGDEFDiguanylate cyclase, GGDEF domain2.00E-41
WP_011071094.1 1401654 1401192 - 153PF13905
PF13728
PF13098
PF08534
Thioredoxin_8
TraF
Thioredoxin_2
Redoxin
Thioredoxin-like
F plasmid transfer operon protein
Thioredoxin-like domain
Redoxin
7.40E-06
7.90E-06
1.70E-04
2.80E-04
WP_011071095.1 1403816 1401653 - 720PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.30E-32
3.30E-17
WP_011071096.1 1403965 1404448 + 160PF06172Cupin_5Cupin superfamily (DUF985)2.70E-43
WP_011071097.1 1405509 1404594 - 304PF07859
PF20434
PF00135
PF10340
Abhydrolase_3
BD-FAE
COesterase
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
Steryl acetyl hydrolase
4.60E-66
6.90E-19
1.80E-13
8.20E-11
WP_011071098.1 1405858 1407220 + 453PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
1.70E-48
2.90E-06
WP_011071099.1 1408119 1407513 - 201PF14096DUF4274Domain of unknown function (DUF4274)5.90E-15
WP_011071100.1 1408624 1408198 - 141PF00571CBSCBS domain1.70E-25

Results for WP_011033404.1 [Methanosarcina mazei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048037610.1 10056 9618 - 145PF00582UspUniversal stress protein family2.70E-29
WP_048037613.1 10594 10102 - 163PF00582UspUniversal stress protein family4.80E-35
WP_015411836.1 10621 11074 + 151INFERRED GENE---
WP_048037611.1 11832 11379 - 150PF00582UspUniversal stress protein family1.40E-36
WP_011033400.1 12437 11948 - 162PF00582UspUniversal stress protein family1.40E-35
WP_011033401.1 12956 12503 - 150PF00582UspUniversal stress protein family7.20E-36
WP_011033402.1 13568 13073 - 164PF00582UspUniversal stress protein family2.20E-35
WP_226987713.1 14931 14265 - 221PF07812TfuATfuA-like protein1.10E-46
WP_011033404.1 16281 15006 - 424PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-83
WP_011033405.1 16486 16714 + 75PF11127DUF2892Protein of unknown function (DUF2892)4.00E-12
WP_011033406.1 17032 17269 + 78NO PFAM MATCH---

Results for WP_011020223.1 [Methanosarcina acetivorans C2A] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048064827.1 189735 190125 + 129PF17253DUF5320Family of unknown function (DUF5320)2.10E-20
WP_011020217.1 190534 190750 + 71NO PFAM MATCH---
WP_011020218.1 190782 191763 + 326PF04055
PF14842
Radical_SAM
FliG_N
Radical SAM superfamily
FliG N-terminal domain
9.80E-12
9.40E-04
WP_011020219.1 192494 191990 - 167PF00210FerritinFerritin-like domain2.40E-41
WP_011020220.1 193001 192548 - 150PF00582UspUniversal stress protein family1.50E-36
WP_226990714.1 193153 194119 + 321NO PFAM MATCH---
WP_048064828.1 194115 194373 + 85NO PFAM MATCH---
WP_011020222.1 195166 194494 - 223PF07812TfuATfuA-like protein3.10E-47
WP_011020223.1 196425 195150 - 424PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-86
WP_226990715.1 196661 196874 + 70PF11127DUF2892Protein of unknown function (DUF2892)1.90E-11
WP_226990716.1 198135 200520 + 794PF00122
PF00702
PF08282
PF02535
E1-E2_ATPase
Hydrolase
Hydrolase_3
Zip
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
ZIP Zinc transporter
2.00E-53
5.80E-39
6.60E-06
8.30E-06
WP_226990717.1 200850 201402 + 183PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
7.50E-08
1.00E-05
WP_048064831.1 201678 201459 - 72PF13396
PF03006
PLDc_N
HlyIII
Phospholipase_D-nuclease N-terminal
Haemolysin-III related
2.40E-11
7.70E-04
WP_011020227.1 203218 201865 - 450PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
3.10E-45
1.70E-12
WP_011020228.1 203499 204366 + 288PF04072LCMLeucine carboxyl methyltransferase3.20E-39
WP_011020229.1 206095 204616 - 492PF01409
PF17759
PF00152
tRNA-synt_2d
tRNA_synthFbeta
tRNA-synt_2
tRNA synthetases class II core domain (F)
Phenylalanyl tRNA synthetase beta chain CLM domain
tRNA synthetases class II (D, K and N)
2.80E-90
3.10E-08
7.40E-04
WP_011020230.1 207555 206241 - 437PF00579tRNA-synt_1btRNA synthetases class I (W and Y)6.80E-35

Results for WP_011011117.1 [Pyrococcus furiosus DSM 3638] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004068677.1 927 93 - 277PF00881NitroreductaseNitroreductase family2.20E-30
WP_011011117.1 2243 938 - 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-57
WP_004068674.1 3340 2239 - 366PF00899
PF01488
ThiF
Shikimate_DH
ThiF family
Shikimate / quinate 5-dehydrogenase
3.90E-19
1.40E-05
WP_223208989.1 3958 3352 - 201NO PFAM MATCH---
WP_004068668.1 4926 4122 - 267PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.80E-21
5.80E-12
9.00E-05
WP_020953572.1 5131 4972 - 52NO PFAM MATCH---
WP_011011118.1 5307 6300 + 330PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.90E-23
5.00E-10
4.90E-04
WP_011011119.1 6463 7951 + 495PF01637
PF13173
PF13191
PF13412
PF04471
ATPase_2
AAA_14
AAA_16
HTH_24
Mrr_cat
ATPase domain predominantly from Archaea
AAA domain
AAA ATPase domain
Winged helix-turn-helix DNA-binding
Restriction endonuclease
3.60E-12
3.40E-11
2.10E-10
1.70E-05
2.40E-05
WP_011011120.1 8053 8548 + 164PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
3.80E-16
2.80E-08
8.80E-05
WP_011011121.1 8537 9230 + 230PF00899
PF03435
ThiF
Sacchrp_dh_NADP
ThiF family
Saccharopine dehydrogenase NADP binding domain
1.70E-59
6.60E-04

Results for WP_001301741.1 back to top

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Any response failure from Entrez database (error on database side)

Results for NP_455462.1 back to top

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Couldn't process NP_455462.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for NP_386391.1 back to top

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Couldn't process NP_386391.1 Genbank filestream. May be corrupt.

Results for WP_010969697.1 [Sinorhizobium meliloti] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003533844.1 26150 25595 - 184PF08281
PF04542
PF04545
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
4.00E-14
2.40E-10
8.30E-09
WP_003533842.1 26508 26133 - 124PF03640Lipoprotein_15Secreted repeat of unknown function2.10E-34
WP_013844631.1 26764 27046 + 93PF20126DUF6516Family of unknown function (DUF6516)3.90E-14
WP_003533838.1 27042 27402 + 119PF13412
PF01047
PF12802
PF08279
PF19187
HTH_24
MarR
MarR_2
HTH_11
HTH_PafC
Winged helix-turn-helix DNA-binding
MarR family
MarR family
HTH domain
PafC helix-turn-helix domain
1.10E-05
4.70E-05
5.40E-05
1.20E-04
2.70E-04
WP_010969701.1 28497 27408 - 362PF05145AbrBTransition state regulatory protein AbrB1.20E-86
WP_014529331.1 28747 29875 + 375PF13604
PF13538
PF13245
PF01443
PF05970
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
PIF1
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Viral (Superfamily 1) RNA helicase
PIF1-like helicase
7.80E-27
3.50E-18
9.20E-15
1.10E-09
4.80E-09
WP_010969699.1 32005 30103 - 633PF01734PatatinPatatin-like phospholipase1.00E-19
WP_014526933.1 32394 35469 + 1024PF13191
PF00211
PF13401
PF01637
AAA_16
Guanylate_cyc
AAA_22
ATPase_2
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
ATPase domain predominantly from Archaea
3.40E-18
7.30E-08
8.20E-05
6.10E-04
WP_010969697.1 35452 36682 + 409PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-47
WP_010969696.1 36689 37472 + 260PF07812TfuATfuA-like protein1.00E-41
WP_010969695.1 37505 38690 + 394NO PFAM MATCH---
WP_010969694.1 38711 39407 + 231NO PFAM MATCH---
WP_010969693.1 39782 39428 - 117PF13405
PF13202
PF00036
PF13499
PF13833
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand domain
EF hand
EF hand
EF-hand domain pair
EF-hand domain pair
1.50E-14
1.00E-13
2.10E-13
1.30E-10
6.50E-08
WP_003533819.1 40039 39799 - 79PF05433Rick_17kDa_AntiGlycine zipper 2TM domain3.20E-05
WP_010969692.1 41476 40369 - 368NO PFAM MATCH---
WP_003533815.1 42417 41706 - 236PF05988
PF00578
DUF899
AhpC-TSA
Bacterial protein of unknown function (DUF899)
AhpC/TSA family
1.20E-64
3.50E-04
WP_003533813.1 42611 43364 + 250PF03740PdxJPyridoxal phosphate biosynthesis protein PdxJ5.70E-75

Results for WP_010914556.1 back to top

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Couldn't process WP_010914556.1 Genbank filestream. May be corrupt.

Results for NP_268966.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_010906793.1 [Pasteurella multocida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010906798.1 270522 269805 - 238PF00899ThiFThiF family2.80E-58
WP_010906797.1 271744 270523 - 406PF03453
PF00994
PF03454
MoeA_N
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
7.80E-45
7.20E-29
6.20E-21
WP_005726594.1 271986 272643 + 218PF01227GTP_cyclohydroIGTP cyclohydrolase I1.00E-61
WP_005754110.1 274699 272737 - 653PF00501
PF13193
PF16177
AMP-binding
AMP-binding_C
ACAS_N
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
Acetyl-coenzyme A synthetase N-terminus
2.10E-98
7.10E-29
2.50E-18
WP_005716151.1 274946 275750 + 267PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family8.30E-26
WP_010906796.1 275759 276533 + 257PF05117
PF06877
DUF695
RraB
Family of unknown function (DUF695)
Regulator of ribonuclease activity B
3.00E-38
7.00E-28
WP_010906795.1 277305 276603 - 233PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.20E-04
WP_005716148.1 277948 277534 - 137PF06295
PF19029
DUF1043
DUF883_C
Protein of unknown function (DUF1043)
DUF883 C-terminal glycine zipper region
1.80E-44
8.70E-04
WP_010906793.1 279829 278068 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-79
4.40E-66
WP_010906792.1 280623 279906 - 238PF08241
PF13847
PF13649
PF01209
Methyltransf_11
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
7.70E-11
3.40E-06
3.50E-06
4.10E-04
WP_010906791.1 280645 281347 + 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.10E-18
3.30E-11
2.40E-04
WP_010906790.1 281496 282801 + 434PF05201
PF01488
PF00745
PF02423
PF02882
GlutR_N
Shikimate_DH
GlutR_dimer
OCD_Mu_crystall
THF_DHG_CYH_C
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
Ornithine cyclodeaminase/mu-crystallin family
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
1.30E-48
1.20E-47
7.60E-20
4.80E-05
6.60E-04
WP_010906789.1 282878 284102 + 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
1.40E-67
9.00E-06
WP_005756738.1 284938 286207 + 422NO PFAM MATCH---
WP_005756736.1 288307 286267 - 679PF01432
PF19310
Peptidase_M3
TOP_N
Peptidase family M3
Neurolysin/Thimet oligopeptidase, N-terminal domain
1.10E-165
5.90E-30
WP_010906787.1 288428 288791 + 120PF04304DUF454Protein of unknown function (DUF454)6.70E-36
WP_010906786.1 288847 290419 + 523PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle6.00E-50

Results for WP_003121999.1 back to top

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Couldn't process WP_003121999.1 Genbank filestream. May be corrupt.

Results for WP_005906871.1 [Aeromonas molluscorum 848] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019000992.1 0 649 + 216INFERRED GENE---
WP_005906861.1 1639 736 - 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.50E-36
1.60E-20
WP_005906864.1 1740 2379 + 212PF13460
PF05368
PF01370
NAD_binding_10
NmrA
Epimerase
NAD(P)H-binding
NmrA-like family
NAD dependent epimerase/dehydratase family
3.30E-26
1.00E-07
2.70E-05
WP_005906865.1 3802 2464 - 445PF00990
PF05231
GGDEF
MASE1
Diguanylate cyclase, GGDEF domain
MASE1
1.30E-33
3.50E-04
WP_083940403.1 4103 5231 + 375PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
5.10E-27
4.70E-19
WP_005906867.1 5335 6499 + 387PF01053
PF03841
PF00266
Cys_Met_Meta_PP
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
L-seryl-tRNA selenium transferase
Aminotransferase class-V
4.00E-130
2.50E-05
3.20E-04
WP_005906868.1 7757 6641 - 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
6.70E-60
9.20E-22
WP_005906869.1 8118 8433 + 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein3.90E-30
WP_005906871.1 8687 10448 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.60E-76
5.50E-65

Results for WP_003088682.1 [Amycolatopsis vancoresmycina DSM 44592] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003088682.1 0 1865 + 620PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-97
WP_003088685.1 1913 3359 + 481NO PFAM MATCH---
WP_003088689.1 3759 4671 + 304PF07730HisKA_3Histidine kinase9.20E-14

Results for WP_003055273.1 [Amycolatopsis vancoresmycina] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033262454.1 83027 80963 - 687PF00501
PF13193
PF10604
AMP-binding
AMP-binding_C
Polyketide_cyc2
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
Polyketide cyclase / dehydrase and lipid transport
4.60E-68
2.30E-22
3.40E-05
WP_003073725.1 84132 83193 - 312PF13280
PF08279
PF08220
PF19187
PF02082
WYL
HTH_11
HTH_DeoR
HTH_PafC
Rrf2
WYL domain
HTH domain
DeoR-like helix-turn-helix domain
PafC helix-turn-helix domain
Iron-dependent Transcriptional regulator
2.40E-28
9.30E-13
3.00E-07
1.60E-05
2.50E-04
WP_033262455.1 84219 84612 + 130PF18029
PF00903
Glyoxalase_6
Glyoxalase
Glyoxalase-like domain
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
1.70E-06
2.10E-05
WP_003073721.1 84717 85467 + 249PF13561
PF00106
PF01370
PF08659
PF13460
adh_short_C2
adh_short
Epimerase
KR
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
NAD(P)H-binding
5.90E-48
6.50E-45
4.60E-08
2.40E-05
4.50E-05
WP_003073719.1 85502 86828 + 441PF00083
PF07690
PF13347
Sugar_tr
MFS_1
MFS_2
Sugar (and other) transporter
Major Facilitator Superfamily
MFS/sugar transport protein
1.80E-36
9.00E-27
8.60E-08
WP_033262456.1 86829 88683 + 617PF13185
PF13556
PF01590
PF17853
PF13492
GAF_2
HTH_30
GAF
GGDEF_2
GAF_3
GAF domain
PucR C-terminal helix-turn-helix domain
GAF domain
GGDEF-like domain
GAF domain
2.50E-17
6.70E-17
2.20E-15
3.20E-15
5.40E-11
WP_003055267.1 88828 89152 + 107NO PFAM MATCH---
WP_003055270.1 89191 89374 + 60NO PFAM MATCH---
WP_003055273.1 89370 91566 + 731PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-101
WP_003055276.1 91878 91584 - 97NO PFAM MATCH---
WP_033262457.1 93205 92008 - 398PF10503
PF00326
Esterase_PHB
Peptidase_S9
Esterase PHB depolymerase
Prolyl oligopeptidase family
3.30E-38
4.80E-06
WP_003055284.1 93396 94725 + 442PF07519
PF10605
PF00326
Tannase
3HBOH
Peptidase_S9
Tannase and feruloyl esterase
3HB-oligomer hydrolase (3HBOH)
Prolyl oligopeptidase family
8.60E-10
8.00E-09
4.00E-05
WP_003055286.1 95066 95474 + 135NO PFAM MATCH---
WP_003055288.1 96457 95476 - 326PF07676PD40WD40-like Beta Propeller Repeat2.20E-04
WP_033262458.1 97665 96453 - 403PF07690
PF12832
PF00083
MFS_1
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
MFS_1 like family
Sugar (and other) transporter
1.10E-29
1.40E-05
5.50E-04
WP_003055294.1 98587 97711 - 291PF04185PhosphoesterasePhosphoesterase family5.70E-32
WP_003055297.1 98822 99074 + 83NO PFAM MATCH---

Results for WP_002541005.1 [Grimontia indica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002540993.1 15648 15141 - 168PF03887YfbUYfbU domain5.60E-65
WP_002540994.1 15852 16500 + 215PF01891CbiMCobalt uptake substrate-specific transmembrane region7.20E-14
WP_002540996.1 16569 16995 + 141PF04138GtrAGtrA-like protein1.50E-14
WP_002540998.1 17767 17026 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.80E-33
3.70E-21
3.40E-07
WP_002540999.1 19407 18195 - 403PF00563
PF00072
EAL
Response_reg
EAL domain
Response regulator receiver domain
1.20E-46
3.60E-14
WP_002541001.1 21888 19611 - 758PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.10E-204
1.40E-43
WP_002541003.1 23632 22087 - 514PF11840DUF3360Protein of unknown function (DUF3360)7.70E-261
WP_160167794.1 23825 23996 + 56NO PFAM MATCH---
WP_002541005.1 25816 24064 - 583PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-82
5.40E-50
WP_002541006.1 25978 27139 + 386PF07719
PF13428
PF13432
PF13181
PF14559
TPR_2
TPR_14
TPR_16
TPR_8
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-11
1.70E-09
2.60E-08
7.70E-07
1.20E-06
WP_002541007.1 28851 27189 - 553PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle7.80E-59
WP_002541009.1 29224 29995 + 256PF00005
PF13304
PF02463
PF13555
PF09818
ABC_tran
AAA_21
SMC_N
AAA_29
ABC_ATPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
ATPase of the ABC class
1.20E-32
2.10E-12
1.50E-06
2.40E-04
8.10E-04
WP_002541011.1 30093 30858 + 254PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.30E-62
2.70E-07
WP_002541012.1 31254 31956 + 233PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.50E-20
WP_002541015.1 31967 32690 + 240PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.00E-14
WP_002541017.1 33651 32844 - 268PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family9.90E-20
WP_002541018.1 33861 34293 + 143NO PFAM MATCH---

Results for WP_015618321.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_010772870.1 [Enterococcus caccae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010772861.1 106899 105975 - 307PF14503
PF14502
PF00392
YhfZ_C
HTH_41
GntR
YhfZ C-terminal domain
Helix-turn-helix domain
Bacterial regulatory proteins, gntR family
1.60E-73
4.50E-14
3.80E-07
WP_010772862.1 107999 106904 - 364PF00266
PF00155
PF01053
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Aminotransferase class-V
Aminotransferase class I and II
Cys/Met metabolism PLP-dependent enzyme
1.10E-05
1.20E-04
3.90E-04
WP_010772863.1 108889 107995 - 297PF02126PTEPhosphotriesterase family3.10E-78
WP_010772864.1 110220 108912 - 435PF10797YhfTProtein of unknown function3.20E-137
WP_010772865.1 110593 110224 - 122PF10941DUF2620Protein of unknown function DUF26203.90E-45
WP_034860373.1 111096 112500 + 467PF06458MucBPMucBP domain2.90E-31
WP_010772868.1 114044 113087 - 318PF00561
PF12146
PF12697
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
3.40E-10
5.30E-06
6.50E-06
WP_010772869.1 114690 114021 - 222PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-13
WP_010772870.1 116974 115660 - 437PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-33
WP_010772871.1 117884 116966 - 305NO PFAM MATCH---
WP_010772872.1 118767 117891 - 291PF00881NitroreductaseNitroreductase family9.30E-13
WP_010772873.1 119081 118763 - 105PF19388DUF5963Family of unknown function (DUF5963)2.80E-28
WP_010772874.1 119882 119138 - 247PF01061ABC2_membraneABC-2 type transporter3.30E-11
WP_010772875.1 120772 119881 - 296PF00005
PF02463
PF13304
PF13476
PF03193
ABC_tran
SMC_N
AAA_21
AAA_23
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RsgA GTPase
1.30E-20
2.10E-10
8.00E-07
8.70E-04
9.40E-04
WP_010772876.1 120974 120824 - 49NO PFAM MATCH---
WP_010772877.1 123658 121348 - 769PF02687FtsXFtsX-like permease family7.30E-19
WP_010772878.1 124356 123651 - 234PF00005
PF02463
PF13166
PF09818
PF13304
ABC_tran
SMC_N
AAA_13
ABC_ATPase
AAA_21
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
ATPase of the ABC class
AAA domain, putative AbiEii toxin, Type IV TA system
1.30E-35
2.00E-07
1.50E-06
2.50E-06
4.90E-06

Results for WP_010770539.1 [Enterococcus caccae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010770531.1 124168 123841 - 108PF01638HxlRHxlR-like helix-turn-helix2.70E-29
WP_010770532.1 124524 125793 + 422PF01042
PF01487
PF19445
Ribonuc_L-PSP
DHquinase_I
eIF3h_C
Endoribonuclease L-PSP
Type I 3-dehydroquinase
C-terminal region of eIF3h
1.40E-74
2.80E-07
1.40E-04
WP_010770533.1 125918 126242 + 107NO PFAM MATCH---
WP_010770534.1 126339 127848 + 502PF08903DUF1846Domain of unknown function (DUF1846)1.20E-230
WP_010770535.1 128248 128488 + 79NO PFAM MATCH---
WP_245558627.1 128600 129455 + 284NO PFAM MATCH---
WP_034859983.1 129447 130068 + 206NO PFAM MATCH---
WP_245558628.1 130072 131026 + 317PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.10E-12
WP_010770539.1 131041 132091 + 349PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.40E-08
WP_010770541.1 132800 133412 + 203PF00005
PF02463
PF13304
PF13558
ABC_tran
SMC_N
AAA_21
SbcC_Walker_B
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
SbcC/RAD50-like, Walker B motif
3.10E-12
6.10E-12
2.80E-10
1.10E-04
WP_010770542.1 133712 134018 + 101PF01022
PF12840
HTH_5
HTH_20
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
2.50E-16
4.40E-09
WP_010770543.1 134193 135246 + 350PF01758SBFSodium Bile acid symporter family3.30E-64
WP_010770544.1 135251 135653 + 133PF01451LMWPcLow molecular weight phosphotyrosine protein phosphatase3.60E-23
WP_010770545.1 136911 136032 - 292PF01381HTH_3Helix-turn-helix2.60E-04
WP_010770546.1 137174 138230 + 351NO PFAM MATCH---
WP_010770547.1 138204 138888 + 227NO PFAM MATCH---
WP_071865839.1 139029 140583 + 517PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
8.70E-26
8.90E-22
2.90E-11
6.40E-06

Results for WP_015622289.1 [Actinoplanes sp. N902-109] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015622282.1 4924685 4925723 + 345PF02739
PF01367
5_3_exonuc_N
5_3_exonuc
5'-3' exonuclease, N-terminal resolvase-like domain
5'-3' exonuclease, C-terminal SAM fold
3.50E-32
1.00E-18
WP_015622283.1 4926790 4925719 - 356NO PFAM MATCH---
WP_015622284.1 4928637 4926819 - 605PF00326
PF20434
PF02129
PF01738
PF12146
Peptidase_S9
BD-FAE
Peptidase_S15
DLH
Hydrolase_4
Prolyl oligopeptidase family
BD-FAE
X-Pro dipeptidyl-peptidase (S15 family)
Dienelactone hydrolase family
Serine aminopeptidase, S33
1.10E-47
2.90E-13
5.50E-13
7.70E-13
2.10E-08
WP_015622286.1 4929935 4928633 - 433PF01494
PF12831
PF01266
PF00890
PF04820
FAD_binding_3
FAD_oxidored
DAO
FAD_binding_2
Trp_halogenase
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Tryptophan halogenase
7.20E-09
7.30E-09
2.30E-07
2.60E-07
2.60E-06
WP_015622285.1 4930218 4929936 - 93PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)2.00E-09
WP_015622287.1 4931680 4930198 - 493PF04055
PF13394
PF13353
PF13186
Radical_SAM
Fer4_14
Fer4_12
SPASM
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
Iron-sulfur cluster-binding domain
8.30E-21
1.30E-08
1.40E-08
2.20E-08
WP_015622288.1 4932004 4931737 - 88NO PFAM MATCH---
WP_015622291.1 4933418 4932110 - 435PF07812TfuATfuA-like protein1.30E-41
WP_015622289.1 4934581 4933417 - 387PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-63
WP_015622290.1 4935409 4934599 - 269PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
2.60E-27
8.90E-17
7.00E-08
WP_015622292.1 4936351 4935412 - 312PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
4.40E-29
3.90E-08
WP_015622293.1 4936488 4937430 + 313NO PFAM MATCH---
WP_015622294.1 4937426 4937672 + 81PF00196
PF13384
GerE
HTH_23
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
5.20E-08
1.90E-04
WP_015622295.1 4937676 4937856 + 59NO PFAM MATCH---
WP_015622296.1 4937863 4940719 + 951PF00211
PF13191
Guanylate_cyc
AAA_16
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
2.50E-19
3.60E-17
WP_198028867.1 4940709 4941603 + 297PF00082Peptidase_S8Subtilase family5.40E-26
WP_157408449.1 4941583 4942198 + 204PF01590
PF13185
PF13492
GAF
GAF_2
GAF_3
GAF domain
GAF domain
GAF domain
1.60E-11
5.30E-11
1.60E-07

Results for WP_016332221.1 [Amycolatopsis keratiniphila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007034631.1 1956942 1956660 - 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor1.40E-30
WP_016332214.1 1957110 1957473 + 120PF03795
PF20321
YCII
DUF6616
YCII-related domain
Family of unknown function (DUF6616)
5.30E-19
3.60E-04
WP_016332215.1 1958142 1957473 - 222PF05103DivIVADivIVA protein7.80E-06
WP_228688325.1 1958309 1959050 + 246PF11716MDMPI_NMycothiol maleylpyruvate isomerase N-terminal domain6.70E-04
WP_043847968.1 1960385 1959050 - 444PF04234
PF05425
CopC
CopD
CopC domain
Copper resistance protein D
1.30E-18
1.50E-13
WP_016332218.1 1960960 1960381 - 192NO PFAM MATCH---
WP_016332219.1 1961763 1961076 - 228PF01638
PF14864
HxlR
Alkyl_sulf_C
HxlR-like helix-turn-helix
Alkyl sulfatase C-terminal
1.80E-23
7.00E-04
WP_016332220.1 1962637 1961797 - 279PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
5.40E-41
8.10E-10
7.70E-04
WP_016332221.1 1962860 1965131 + 756PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-100
WP_016332222.1 1965173 1966619 + 481PF00881NitroreductaseNitroreductase family3.70E-05
WP_016332223.1 1966875 1967757 + 293PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
8.30E-22
6.10E-21
WP_267283979.1 1967916 1968870 + 317PF08012DUF1702Protein of unknown function (DUF1702)7.00E-130
WP_016332225.1 1968866 1970831 + 654PF13517
PF01839
PF07593
FG-GAP_3
FG-GAP
UnbV_ASPIC
FG-GAP-like repeat
FG-GAP repeat
ASPIC and UnbV
4.90E-23
2.00E-17
1.00E-11
WP_043848641.1 1970836 1971817 + 326NO PFAM MATCH---
WP_016332227.1 1971813 1973166 + 450PF00067p450Cytochrome P4503.00E-87
WP_016332228.1 1973171 1973729 + 185PF19449DUF5987Family of unknown function (DUF5987)3.20E-91
WP_016332229.1 1973725 1975378 + 550PF00732
PF05199
PF01266
PF07992
PF00890
GMC_oxred_N
GMC_oxred_C
DAO
Pyr_redox_2
FAD_binding_2
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
7.20E-15
3.80E-12
4.50E-11
5.30E-06
4.70E-05

Results for WP_020445682.1 [Salinarchaeum sp. Harcht-Bsk1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020445674.1 866603 866759 + 51NO PFAM MATCH---
WP_020445675.1 866755 867268 + 170PF00011HSP20Hsp20/alpha crystallin family1.90E-06
WP_020445676.1 867330 868371 + 346NO PFAM MATCH---
WP_020445677.1 868531 868978 + 148PF19103DUF5790Family of unknown function (DUF5790)1.30E-63
WP_020445678.1 869384 869084 - 99NO PFAM MATCH---
WP_020445679.1 869758 869380 - 125PF12840
PF09339
PF01022
PF01978
PF12802
HTH_20
HTH_IclR
HTH_5
TrmB
MarR_2
Helix-turn-helix domain
IclR helix-turn-helix domain
Bacterial regulatory protein, arsR family
Sugar-specific transcriptional regulator TrmB
MarR family
1.30E-11
4.40E-07
8.90E-06
3.10E-05
1.60E-04
WP_020445680.1 871074 869898 - 391PF00571
PF02163
PF13398
CBS
Peptidase_M50
Peptidase_M50B
CBS domain
Peptidase family M50
Peptidase M50B-like
3.30E-24
1.40E-16
5.00E-04
WP_020445681.1 872164 871165 - 332PF13409
PF13410
PF00043
PF14497
PF13417
GST_N_2
GST_C_2
GST_C
GST_C_3
GST_N_3
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, N-terminal domain
9.90E-21
8.20E-12
4.40E-08
3.90E-05
1.30E-04
WP_020445682.1 874059 872295 - 587PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-45
WP_255347062.1 874227 876642 + 804PF13520
PF00324
PF00582
PF13906
AA_permease_2
AA_permease
Usp
AA_permease_C
Amino acid permease
Amino acid permease
Universal stress protein family
C-terminus of AA_permease
1.50E-32
1.70E-20
5.70E-12
1.20E-05
WP_020445684.1 876726 877284 + 185PF00571
PF01381
PF13560
PF12844
CBS
HTH_3
HTH_31
HTH_19
CBS domain
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.10E-16
1.20E-09
5.20E-09
5.00E-05
WP_020445685.1 877475 878306 + 276PF02535ZipZIP Zinc transporter9.50E-19
WP_020445686.1 879442 878404 - 345PF02769
PF00586
AIRS_C
AIRS
AIR synthase related protein, C-terminal domain
AIR synthase related protein, N-terminal domain
9.50E-23
8.10E-18
WP_020445687.1 880007 879491 - 171PF11848DUF3368Domain of unknown function (DUF3368)6.60E-12
WP_020445688.1 880301 880010 - 96PF03683UPF0175Uncharacterised protein family (UPF0175)4.80E-07
WP_020445689.1 880527 883302 + 924PF08494
PF00270
PF00271
PF19306
PF04851
DEAD_assoc
DEAD
Helicase_C
Lhr_WH
ResIII
DEAD/H associated
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
Helicase Lhr winged helix domain
Type III restriction enzyme, res subunit
4.20E-50
1.00E-31
2.30E-17
2.20E-12
1.30E-07
WP_020445690.1 884041 883369 - 223PF12840
PF12802
PF01022
HTH_20
MarR_2
HTH_5
Helix-turn-helix domain
MarR family
Bacterial regulatory protein, arsR family
2.20E-11
3.00E-04
4.40E-04

Results for WP_046010478.1 [Oleispira antarctica RB-8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046010474.1 4125856 4126357 + 166PF02600DsbBDisulfide bond formation protein DsbB2.60E-35
WP_046010475.1 4126506 4126986 + 159PF04353Rsd_AlgQRegulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ2.20E-53
WP_084687633.1 4127052 4128021 + 322PF00400
PF12894
PF13360
PF02239
PF20426
WD40
ANAPC4_WD40
PQQ_2
Cytochrom_D1
NBCH_WD40
WD domain, G-beta repeat
Anaphase-promoting complex subunit 4 WD40 domain
PQQ-like domain
Cytochrome D1 heme domain
Neurobeachin beta propeller domain
3.90E-15
6.80E-11
5.00E-09
5.30E-06
5.40E-06
WP_084687634.1 4128547 4128037 - 169PF13511DUF4124Domain of unknown function (DUF4124)1.80E-07
WP_052718152.1 4128599 4129343 + 247PF01656
PF13614
PF10609
PF09140
PF02374
CbiA
AAA_31
ParA
MipZ
ArsA_ATPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
NUBPL iron-transfer P-loop NTPase
ATPase MipZ
Anion-transporting ATPase
1.80E-16
1.50E-13
3.10E-09
7.90E-06
1.80E-05
WP_017116305.1 4129950 4130412 + 154INFERRED GENE---
WP_084687635.1 4130335 4130527 + 63NO PFAM MATCH---
WP_084687636.1 4131441 4130730 - 236PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.30E-12
WP_046010478.1 4131735 4133922 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-69
2.40E-67
2.20E-08
WP_046010479.1 4133934 4134216 + 93PF03692CxxCxxCCPutative zinc- or iron-chelating domain3.20E-10
WP_046010480.1 4135179 4134315 - 287PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.10E-09
WP_046010481.1 4136419 4135138 - 426PF00990
PF17149
GGDEF
CHASE5
Diguanylate cyclase, GGDEF domain
Periplasmic sensor domain found in signal transduction proteins
6.80E-41
1.60E-05
WP_046010482.1 4136774 4136978 + 67NO PFAM MATCH---
WP_046010483.1 4137188 4137494 + 101PF19669DUF6172Family of unknown function (DUF6172)1.80E-37
WP_046010484.1 4137709 4138408 + 232NO PFAM MATCH---
WP_046010485.1 4139024 4138523 - 166PF00903
PF13669
PF18029
Glyoxalase
Glyoxalase_4
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
1.40E-10
5.30E-07
4.00E-05
WP_046011322.1 4139145 4140012 + 288PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.50E-24
2.30E-19

Results for WP_010839852.1 back to top

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Couldn't process WP_010839852.1 Genbank filestream. May be corrupt.

Results for WP_010864062.1 [Plesiomonas shigelloides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_265844735.1 40371 39471 - 299PF12697
PF00561
PF12146
PF00975
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Thioesterase
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Thioesterase domain
1.40E-15
1.00E-14
1.10E-05
3.20E-04
WP_265844737.1 42049 40354 - 564PF16582
PF02776
PF02775
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Middle domain of thiamine pyrophosphate
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
2.00E-74
5.70E-21
1.80E-09
WP_265844738.1 43391 42029 - 453PF00425Chorismate_bindchorismate binding enzyme4.30E-70
WP_010864057.1 43762 44977 + 404PF00155
PF01041
PF00266
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Aminotransferase class I and II
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
9.20E-50
1.60E-06
1.90E-04
WP_010864058.1 45169 45775 + 201PF12917
PF13023
PF01966
PF08668
YfbR-like
HD_3
HD
HDOD
5'-deoxynucleotidase YfbR-like
HD domain
HD domain
HDOD domain
2.70E-78
1.10E-15
2.10E-07
9.50E-04
WP_039045654.1 45821 46259 + 145NO PFAM MATCH---
WP_197665196.1 47415 46338 - 358PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
8.00E-63
1.10E-27
WP_010864061.1 47599 48181 + 193NO PFAM MATCH---
WP_010864062.1 48289 50044 + 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-81
1.50E-69
WP_010864063.1 50712 51621 + 302PF01226Form_Nir_transFormate/nitrite transporter2.80E-75
WP_010864064.1 51633 53916 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.30E-203
5.40E-43
WP_010864065.1 54485 55226 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.10E-33
9.30E-19
2.70E-06
WP_010864066.1 55856 55361 - 164PF03887YfbUYfbU domain6.70E-66
WP_265844740.1 56485 56242 - 80NO PFAM MATCH---
WP_010864067.1 57055 56599 - 151PF04217DUF412Protein of unknown function, DUF4125.50E-55
WP_010864068.1 57373 58576 + 400PF00871Acetate_kinaseAcetokinase family9.50E-177
WP_201765072.1 58666 60790 + 707PF01515
PF13500
PF07085
PTA_PTB
AAA_26
DRTGG
Phosphate acetyl/butaryl transferase
AAA domain
DRTGG domain
7.00E-127
3.20E-48
7.90E-28

Results for WP_012138056.1 [Marinobacter lipolyticus SM19] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012138048.1 195070 195955 + 294PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.40E-26
1.20E-17
WP_012138049.1 197058 195951 - 368PF00850Hist_deacetylHistone deacetylase domain2.30E-91
WP_012138050.1 197373 198312 + 312PF10118Metal_hydrolPredicted metal-dependent hydrolase8.80E-62
WP_012138051.1 198364 199930 + 521PF13738
PF00743
PF13450
PF07992
PF13434
Pyr_redox_3
FMO-like
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
3.20E-17
1.10E-15
8.50E-13
4.70E-12
3.80E-08
WP_012138052.1 200775 199902 - 290PF13410
PF00043
PF14497
PF02798
PF13409
GST_C_2
GST_C
GST_C_3
GST_N
GST_N_2
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
2.60E-10
1.40E-07
2.20E-05
2.30E-04
5.80E-04
WP_228677608.1 200951 202004 + 350PF16868NMT1_3NMT1-like family1.90E-108
WP_012138054.1 202018 204184 + 721PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component1.20E-77
WP_012138055.1 204194 204938 + 247PF01925TauESulfite exporter TauE/SafE4.20E-35
WP_012138056.1 205021 207217 + 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
9.10E-77
3.40E-73
1.20E-09
WP_012138057.1 207213 207756 + 180NO PFAM MATCH---
WP_012138058.1 208228 207772 - 151PF04940BLUFSensors of blue-light using FAD6.20E-29
WP_012138059.1 209009 208277 - 243PF00208
PF02826
ELFV_dehydrog
2-Hacid_dh_C
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
8.70E-61
9.20E-04
WP_012138060.1 209520 208965 - 184PF02812ELFV_dehydrog_NGlu/Leu/Phe/Val dehydrogenase, dimerisation domain1.80E-38
WP_012138061.1 210505 209650 - 284PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
1.80E-30
2.30E-18
6.20E-04
WP_012138062.1 210624 210918 + 97PF03992ABMAntibiotic biosynthesis monooxygenase1.40E-16
WP_012138063.1 210995 211391 + 131PF00903
PF13669
PF18029
Glyoxalase
Glyoxalase_4
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
2.90E-18
2.80E-07
3.00E-06
WP_012138064.1 211740 211503 - 78PF07878
PF15919
RHH_5
HicB_lk_antitox
CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5
HicB_like antitoxin of bacterial toxin-antitoxin system
3.60E-04
5.80E-04

Results for WP_016096775.1 [Bacillus cereus HuA3-9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012259903.1 169558 170254 + 232INFERRED GENE---
WP_016107024.1 170352 170522 + 56INFERRED GENE---
WP_016096769.1 171217 170905 - 103PF01381
PF04218
HTH_3
CENP-B_N
Helix-turn-helix
CENP-B N-terminal DNA-binding domain
3.60E-04
9.00E-04
WP_016096770.1 172068 171228 - 279PF00797Acetyltransf_2N-acetyltransferase2.40E-43
WP_016096771.1 173654 173222 - 143PF17555TssNType VI secretion system, TssN2.40E-04
WP_016096772.1 173857 173650 - 68PF01381
PF13560
PF12844
PF13545
PF13443
HTH_3
HTH_31
HTH_19
HTH_Crp_2
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Crp-like helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.10E-13
3.10E-08
2.00E-07
3.80E-05
8.40E-05
WP_016096773.1 174413 175247 + 277PF13411
PF00376
MerR_1
MerR
MerR HTH family regulatory protein
MerR family regulatory protein
8.80E-16
6.20E-09
WP_042889826.1 176736 175692 - 347PF02661FicFic/DOC family5.50E-14
WP_016096775.1 178579 177340 - 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-33
WP_080116932.1 179471 179639 + 55PF02796
PF13412
PF01022
PF12802
HTH_7
HTH_24
HTH_5
MarR_2
Helix-turn-helix domain of resolvase
Winged helix-turn-helix DNA-binding
Bacterial regulatory protein, arsR family
MarR family
5.70E-06
1.70E-04
6.10E-04
7.00E-04
WP_016096777.1 181472 179807 - 554PF02868
PF01447
PF07504
PF03413
Peptidase_M4_C
Peptidase_M4
FTP
PepSY
Thermolysin metallopeptidase, alpha-helical domain
Thermolysin metallopeptidase, catalytic domain
Fungalysin/Thermolysin Propeptide Motif
Peptidase propeptide and YPEB domain
1.10E-60
7.20E-47
5.50E-13
1.30E-07
WP_002016524.1 183362 183227 - 44NO PFAM MATCH---
WP_016096779.1 183635 184199 + 187PF05901ExcaliburExcalibur calcium-binding domain4.10E-13
WP_016096780.1 184537 184900 + 120NO PFAM MATCH---
WP_002169921.1 185681 185528 - 50NO PFAM MATCH---
WP_016096781.1 186292 185995 - 98PF01022
PF12840
HTH_5
HTH_20
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
2.80E-08
6.40E-06
WP_016096782.1 186629 186497 - 43PF16219DUF4879Domain of unknown function (DUF4879)4.10E-08

Results for WP_016094523.1 [Bacillus cereus HuA3-9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_080116884.1 1017188 1017029 - 52PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase7.40E-10
WP_001034130.1 1017451 1017805 + 118INFERRED GENE---
WP_016094518.1 1018124 1017941 - 60PF13121DUF3976Domain of unknown function (DUF3976)3.70E-29
WP_002117153.1 1018530 1018152 - 125NO PFAM MATCH---
WP_016094519.1 1018742 1018532 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.70E-10
1.10E-06
3.10E-05
7.00E-05
WP_016094520.1 1019720 1022588 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.90E-63
3.70E-55
6.80E-36
WP_016094521.1 1022717 1023974 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.80E-81
6.20E-20
9.60E-13
1.10E-04
WP_016094522.1 1024099 1026019 + 639NO PFAM MATCH---
WP_016094523.1 1026015 1027965 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.60E-84
WP_016094524.1 1027987 1029550 + 520PF00881NitroreductaseNitroreductase family7.50E-12
WP_002064316.1 1029642 1030233 + 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
3.90E-18
1.90E-17
1.80E-16
9.50E-13
2.60E-11
WP_002064315.1 1030674 1030263 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-49
WP_016094525.1 1031646 1030833 - 270NO PFAM MATCH---
WP_016094526.1 1033156 1031821 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.80E-63
1.20E-20
7.40E-17
6.40E-15
1.70E-09
WP_002140880.1 1033355 1033778 + 140NO PFAM MATCH---
WP_016094527.1 1035061 1033822 - 412PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.90E-23
3.70E-08
WP_016094528.1 1035866 1035080 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.20E-05
6.60E-05
9.40E-04

Results for WP_016110393.1 [Bacillus cereus VD133] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016110386.1 104328 104034 - 97PF10850DUF2653Protein of unknown function (DUF2653)1.20E-27
WP_016110387.1 104820 104343 - 158PF06682SARAFSOCE-associated regulatory factor of calcium homoeostasis8.20E-04
WP_014125701.1 105379 105628 + 83INFERRED GENE---
WP_000016447.1 105932 106241 + 102NO PFAM MATCH---
WP_016110389.1 106606 107488 + 293PF12784PDDEXK_2PD-(D/E)XK nuclease family transposase1.20E-60
WP_001226077.1 107639 107984 + 115INFERRED GENE---
WP_076612162.1 108005 108778 + 257INFERRED GENE---
WP_086557922.1 109056 109727 + 223INFERRED GENE---
WP_016110393.1 110988 109737 - 416PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-29
WP_016110394.1 112469 111875 - 197PF12389Peptidase_M73Camelysin metallo-endopeptidase7.80E-79
WP_000549379.1 112758 112881 + 41INFERRED GENE---
WP_154214209.1 113065 112890 - 57PF13586
PF01609
DDE_Tnp_1_2
DDE_Tnp_1
Transposase DDE domain
Transposase DDE domain
2.50E-09
2.70E-05
WP_076612132.1 113685 113804 + 39INFERRED GENE---
WP_076611647.1 113851 114577 + 242INFERRED GENE---
WP_000169371.1 114633 115044 + 137INFERRED GENE---
WP_001053998.1 115189 115578 + 129INFERRED GENE---
WP_016110398.1 116924 116003 - 306PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
2.90E-41
9.30E-12

Results for WP_016112272.1 [Bacillus cereus VD133] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016112264.1 119430 120066 + 211NO PFAM MATCH---
WP_179194361.1 121391 120272 - 372PF01385
PF07282
PF12323
OrfB_IS605
OrfB_Zn_ribbon
HTH_OrfB_IS605
Probable transposase
Putative transposase DNA-binding domain
Helix-turn-helix domain
1.50E-26
2.40E-25
4.80E-21
WP_016096753.1 121589 122117 + 176INFERRED GENE---
WP_016112267.1 122685 122100 - 194NO PFAM MATCH---
WP_016112268.1 122810 123194 + 127PF13571DUF4133Domain of unknown function (DUF4133)4.00E-04
WP_016112269.1 123210 123849 + 212PF08378NERDNuclease-related domain1.30E-29
WP_000435813.1 125011 125179 + 55NO PFAM MATCH---
WP_016112271.1 125318 126278 + 319NO PFAM MATCH---
WP_016112272.1 126290 127580 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-55
WP_016112273.1 127609 128437 + 275PF00881NitroreductaseNitroreductase family7.80E-12
WP_016112274.1 128426 130070 + 547PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.10E-21
6.10E-19
1.60E-04
4.60E-04
WP_016112275.1 130066 131083 + 338PF16169
PF14399
PF13529
DUF4872
BtrH_N
Peptidase_C39_2
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
Peptidase_C39 like family
4.00E-26
1.60E-17
8.50E-04
WP_016112276.1 131186 131645 + 152NO PFAM MATCH---
WP_016112277.1 131991 134655 + 887PF01131
PF13342
PF01751
PF01396
Topoisom_bac
Toprim_Crpt
Toprim
zf-C4_Topoisom
DNA topoisomerase
C-terminal repeat of topoisomerase
Toprim domain
Topoisomerase DNA binding C4 zinc finger
1.00E-80
1.60E-50
4.10E-13
5.60E-04
WP_016112278.1 135083 135728 + 214PF00565SNaseStaphylococcal nuclease homologue1.60E-25
WP_001014123.1 135760 135961 + 66NO PFAM MATCH---
WP_016112279.1 136037 136325 + 95NO PFAM MATCH---

Results for WP_000615607.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000192982.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001169499.1 77421 76824 - 198PF12870DUF4878Domain of unknown function (DUF4878)5.80E-05
WP_001267334.1 78125 77579 - 181PF19681DUF6183Family of unknown function (DUF6183)1.20E-04
WP_002126037.1 78206 78455 + 83INFERRED GENE---
WP_001036580.1 78834 78471 - 120NO PFAM MATCH---
WP_001178303.1 79150 78967 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_000197118.1 79978 82846 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.20E-63
5.10E-55
1.20E-36
WP_000569891.1 82979 84242 + 420PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.10E-81
3.40E-20
3.70E-13
1.70E-04
WP_001061564.1 84366 86286 + 639NO PFAM MATCH---
WP_000192982.1 86282 88232 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-84
WP_061685117.1 88247 89789 + 513PF00881NitroreductaseNitroreductase family1.00E-11
WP_000996782.1 90230 89819 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001110229.1 91725 90390 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.30E-64
3.70E-20
9.70E-17
1.80E-15
3.40E-10
WP_000332414.1 91924 92353 + 142NO PFAM MATCH---
WP_001099908.1 93627 92391 - 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.10E-22
1.40E-06
2.30E-04
WP_000650098.1 94432 93646 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
8.10E-06
7.70E-04
WP_000424527.1 94628 95462 + 277NO PFAM MATCH---
WP_001128604.1 96160 95476 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.10E-74

Results for WP_012260565.1 [Bacillus mycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002168863.1 71964 72342 + 126INFERRED GENE---
WP_001036563.1 72405 72721 + 105INFERRED GENE---
WP_002011459.1 73038 72855 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_016119838.1 73444 73066 - 125NO PFAM MATCH---
WP_002140896.1 73656 73440 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
6.20E-18
3.80E-10
2.80E-07
5.50E-05
7.20E-05
WP_002140892.1 74482 77350 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.30E-63
4.60E-55
2.30E-36
WP_215588838.1 77479 78736 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
8.00E-81
6.30E-20
9.50E-13
1.10E-04
WP_016101526.1 78861 80781 + 639NO PFAM MATCH---
WP_012260565.1 80777 82727 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-85
WP_256484823.1 82749 84312 + 520PF00881NitroreductaseNitroreductase family9.70E-14
WP_137076167.1 84404 84980 + 191PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.50E-19
6.10E-18
5.40E-17
1.70E-13
5.80E-12
WP_002030461.1 85437 85026 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-48
WP_002126016.1 86930 85595 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-61
6.50E-20
2.50E-16
5.60E-15
9.30E-10
WP_061689062.1 87129 87552 + 140NO PFAM MATCH---
WP_256484824.1 88828 87595 - 410PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
1.50E-22
9.00E-08
6.20E-04
WP_256484825.1 89630 88847 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_256484826.1 89830 90664 + 277PF11667DUF3267Putative zincin peptidase3.50E-04

Results for WP_000615611.1 back to top

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Couldn't process WP_000615611.1 Genbank filestream. May be corrupt.

Results for WP_000615607.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_012260565.1 [Bacillus mycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002168863.1 71964 72342 + 126INFERRED GENE---
WP_001036563.1 72405 72721 + 105INFERRED GENE---
WP_002011459.1 73038 72855 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_016119838.1 73444 73066 - 125NO PFAM MATCH---
WP_002140896.1 73656 73440 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
6.20E-18
3.80E-10
2.80E-07
5.50E-05
7.20E-05
WP_002140892.1 74482 77350 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.30E-63
4.60E-55
2.30E-36
WP_215588838.1 77479 78736 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
8.00E-81
6.30E-20
9.50E-13
1.10E-04
WP_016101526.1 78861 80781 + 639NO PFAM MATCH---
WP_012260565.1 80777 82727 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-85
WP_256484823.1 82749 84312 + 520PF00881NitroreductaseNitroreductase family9.70E-14
WP_137076167.1 84404 84980 + 191PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.50E-19
6.10E-18
5.40E-17
1.70E-13
5.80E-12
WP_002030461.1 85437 85026 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-48
WP_002126016.1 86930 85595 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-61
6.50E-20
2.50E-16
5.60E-15
9.30E-10
WP_061689062.1 87129 87552 + 140NO PFAM MATCH---
WP_256484824.1 88828 87595 - 410PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
1.50E-22
9.00E-08
6.20E-04
WP_256484825.1 89630 88847 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_256484826.1 89830 90664 + 277PF11667DUF3267Putative zincin peptidase3.50E-04

Results for WP_016113850.1 [Bacillus cereus group sp. BfR-BA-01315] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018781101.1 0 683 + 227INFERRED GENE---
WP_016113856.1 1067 881 - 61PF13121DUF3976Domain of unknown function (DUF3976)4.50E-16
WP_016113855.1 1491 1113 - 125NO PFAM MATCH---
WP_016113854.1 1717 1510 - 68PF01381
PF12844
PF13560
PF13413
PF04545
HTH_3
HTH_19
HTH_31
HTH_25
Sigma70_r4
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
6.10E-18
3.90E-10
1.70E-07
8.40E-05
9.60E-05
WP_077294507.1 2558 5426 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.90E-62
1.00E-55
4.70E-37
WP_016113852.1 5578 6838 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.30E-81
1.20E-20
2.50E-12
4.60E-07
WP_016113851.1 7076 8996 + 639NO PFAM MATCH---
WP_016113850.1 8995 10945 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-89
WP_016113849.1 10967 12533 + 521PF00881NitroreductaseNitroreductase family1.20E-11
WP_016113848.1 13212 12801 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.70E-43
WP_001110220.1 13395 14730 + 445INFERRED GENE---
WP_016113846.1 15181 15613 + 143NO PFAM MATCH---
WP_016113845.1 17201 15941 - 419PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.70E-21
1.50E-04
WP_016113844.1 18021 17220 - 266PF13248
PF12773
PF13240
zf-ribbon_3
DZR
zinc_ribbon_2
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
8.60E-06
6.10E-05
1.10E-04
WP_016113843.1 18296 19130 + 277NO PFAM MATCH---
WP_016113842.1 19828 19144 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)7.30E-75

Results for WP_016113574.1 [Bacillus cereus group sp. BfR-BA-01315] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_242227364.1 356 0 - 119PF01289Thiol_cytolysinThiol-activated cytolysin9.60E-21
WP_016113577.1 1644 735 - 302PF00561
PF12697
Abhydrolase_1
Abhydrolase_6
alpha/beta hydrolase fold
Alpha/beta hydrolase family
5.90E-09
3.70E-08
WP_006836832.1 1742 1928 + 62INFERRED GENE---
WP_076611647.1 2304 2790 + 162INFERRED GENE---
WP_006097509.1 2791 3235 + 148INFERRED GENE---
WP_016113574.1 4601 3362 - 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.40E-35
WP_077295728.1 5328 5451 + 40PF09680YjcZ_2Family of unknown function1.50E-11
WP_077295726.1 5601 5700 + 32PF09680YjcZ_2Family of unknown function5.20E-12
WP_016113572.1 7122 5925 - 398PF01494
PF00070
PF13450
PF01266
PF07992
FAD_binding_3
Pyr_redox
NAD_binding_8
DAO
Pyr_redox_2
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
6.10E-20
4.30E-05
1.40E-04
1.70E-04
4.40E-04
WP_000926951.1 7309 7474 + 55INFERRED GENE---
WP_016132966.1 8513 7916 - 198PF13302
PF13420
Acetyltransf_3
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.60E-19
8.10E-04
WP_016113567.1 9914 9356 - 185PF13238AAA_18AAA domain7.30E-11
WP_016113566.1 11465 10199 - 421PF01098FTSW_RODA_SPOVECell cycle protein3.10E-35
WP_016113565.1 11880 11472 - 135PF03551PadRTranscriptional regulator PadR-like family4.10E-14

Results for WP_016128959.1 [Bacillus nitratireducens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071735067.1 125896 125197 - 232NO PFAM MATCH---
WP_016128962.1 126425 126062 - 120NO PFAM MATCH---
WP_001178300.1 126742 126559 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109920.1 127148 126770 - 125NO PFAM MATCH---
WP_071735068.1 127360 127144 - 71PF01381
PF12844
PF13560
PF08279
PF04545
HTH_3
HTH_19
HTH_31
HTH_11
Sigma70_r4
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
HTH domain
Sigma-70, region 4
2.30E-17
4.90E-10
1.20E-06
7.10E-05
1.20E-04
WP_000197121.1 128185 131053 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.30E-63
4.50E-55
1.00E-36
WP_000569917.1 131182 132442 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
8.00E-81
3.40E-20
5.00E-13
1.70E-04
WP_071735069.1 132567 134487 + 639NO PFAM MATCH---
WP_016128959.1 134483 136433 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-85
WP_001182184.1 136455 138018 + 520PF00881NitroreductaseNitroreductase family1.00E-12
WP_000512102.1 138111 138702 + 196PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.80E-17
1.30E-16
3.50E-16
4.50E-12
9.70E-11
WP_000996809.1 139143 138732 - 136PF13048DUF3908Protein of unknown function (DUF3908)4.70E-49
WP_016128958.1 139778 139289 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.30E-09
3.40E-06
7.00E-05
WP_071735070.1 141214 139879 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
4.60E-62
6.50E-20
8.80E-19
1.40E-15
1.20E-10
WP_000332419.1 141412 141841 + 142NO PFAM MATCH---
WP_071735071.1 143117 141881 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
3.90E-23
1.10E-06
WP_016128955.1 143922 143136 - 261PF12773
PF13240
DZR
zinc_ribbon_2
Double zinc ribbon
zinc-ribbon domain
2.20E-05
4.60E-05

Results for WP_016104213.1 [Bacillus cereus VD118] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016104206.1 249498 248664 - 277PF11667DUF3267Putative zincin peptidase3.70E-04
WP_016104207.1 249693 250476 + 260PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
5.40E-05
WP_016104208.1 250495 251734 + 412PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
6.20E-23
6.20E-06
8.20E-04
WP_016104209.1 252203 251774 - 142NO PFAM MATCH---
WP_016104210.1 252402 253737 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
3.40E-62
8.90E-21
3.30E-18
6.70E-15
3.30E-11
WP_002158830.1 253895 254306 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.60E-49
WP_016104211.1 254927 254336 - 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
2.20E-18
8.50E-18
1.40E-15
8.00E-13
8.80E-12
WP_016104212.1 256582 255019 - 520PF00881NitroreductaseNitroreductase family1.80E-12
WP_016104213.1 258554 256604 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-82
WP_016104214.1 260470 258550 - 639NO PFAM MATCH---
WP_002201328.1 261852 260595 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
7.70E-81
6.20E-20
1.60E-11
1.10E-04
WP_016104215.1 264849 261981 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.30E-64
3.70E-55
5.60E-36
WP_016104216.1 265674 265884 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
5.30E-05
7.00E-05
WP_016104217.1 265886 266264 + 125NO PFAM MATCH---
WP_002011459.1 266292 266475 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_002158818.1 266610 266973 + 120NO PFAM MATCH---
WP_016104218.1 266989 267259 + 89NO PFAM MATCH---

Results for WP_016077960.1 back to top

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Couldn't process WP_016077960.1 Genbank filestream. May be corrupt.

Results for WP_016122121.1 [Bacillus sp. 10017] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016122115.1 133961 134645 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)3.40E-75
WP_016122116.1 135493 134659 - 277PF11667DUF3267Putative zincin peptidase9.90E-04
WP_016122117.1 135689 136475 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.20E-06
7.80E-04
WP_016122118.1 136494 137730 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
2.90E-22
7.80E-07
2.20E-04
WP_000332414.1 138197 137768 - 142NO PFAM MATCH---
WP_016122119.1 138396 139731 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
6.90E-65
7.40E-20
6.90E-17
8.80E-16
3.60E-10
WP_000996781.1 139891 140302 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.20E-52
WP_016122120.1 141874 140332 - 513PF00881NitroreductaseNitroreductase family1.90E-12
WP_016122121.1 143839 141889 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-84
WP_001061554.1 145755 143835 - 639NO PFAM MATCH---
WP_000569896.1 147139 145879 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_016122123.1 150140 147272 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.70E-63
5.10E-55
1.30E-36
WP_000428513.1 150964 151174 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.80E-10
1.10E-06
4.10E-05
6.90E-05
WP_001109895.1 151176 151554 + 125NO PFAM MATCH---
WP_001178303.1 151582 151765 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_016122124.1 151898 152261 + 120NO PFAM MATCH---
WP_001171895.1 152371 152530 + 52NO PFAM MATCH---

Results for WP_016152442.1 [Citrobacter sp. 21OH12SH02A-Citro] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016156118.1 3070912 3069163 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
7.10E-61
4.60E-36
1.40E-10
1.50E-05
4.10E-05
WP_016156117.1 3073213 3070948 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.50E-49
1.10E-18
2.00E-04
3.60E-04
WP_003035780.1 3073704 3073419 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 3075538 3073864 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_016152447.1 3076335 3075651 - 227PF02224
PF13189
PF00005
Cytidylate_kin
Cytidylate_kin2
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
1.80E-84
2.70E-06
6.50E-04
WP_016156116.1 3077852 3076568 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.50E-150
WP_016152445.1 3079009 3077920 - 362PF00266Aminotran_5Aminotransferase class-V1.30E-70
WP_016156114.1 3079914 3079221 - 230PF04239DUF421Protein of unknown function (DUF421)7.00E-16
WP_016152442.1 3080050 3081811 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
1.70E-67
WP_003831909.1 3082215 3083073 + 285PF01226Form_Nir_transFormate/nitrite transporter3.10E-74
WP_016152441.1 3083132 3085415 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-208
4.70E-44
WP_003035751.1 3085600 3086341 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_016156113.1 3087247 3086398 - 282PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.00E-15
7.90E-06
WP_016152439.1 3087368 3087644 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.30E-12
WP_016156112.1 3087660 3088926 + 421PF03611EIIC-GATPTS system sugar-specific permease component3.10E-120
WP_016156111.1 3088938 3089736 + 265PF00456
PF13292
PF00676
PF02775
PF17273
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
DUF5338
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Family of unknown function (DUF5338)
3.40E-42
6.40E-15
2.10E-07
4.00E-04
8.90E-04
WP_016156110.1 3089735 3090647 + 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
2.20E-26
1.40E-13

Results for WP_016138813.1 [Acinetobacter calcoaceticus ANC 3811] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016138805.1 1836520 1837354 + 277PF00106
PF13561
PF08659
PF03435
adh_short
adh_short_C2
KR
Sacchrp_dh_NADP
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
Saccharopine dehydrogenase NADP binding domain
4.30E-49
1.90E-41
8.20E-13
4.50E-04
WP_016138806.1 1837376 1838900 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
6.20E-17
1.70E-14
9.40E-14
3.50E-10
4.10E-07
WP_016138807.1 1839013 1839892 + 292PF04072LCMLeucine carboxyl methyltransferase1.80E-38
WP_035366205.1 1841014 1840000 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.10E-35
6.80E-15
1.10E-05
WP_035366208.1 1841149 1842637 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
3.10E-20
4.50E-16
6.40E-11
8.10E-11
1.30E-08
WP_016138810.1 1842681 1843536 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.30E-50
9.40E-36
1.60E-11
WP_016138811.1 1843608 1844502 + 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
5.70E-56
8.60E-11
2.50E-09
8.00E-06
3.10E-04
WP_016138812.1 1844529 1846200 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.70E-17
7.10E-10
2.40E-05
5.40E-05
WP_016138813.1 1848462 1846263 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.50E-75
3.50E-73
1.80E-08
WP_016138814.1 1849995 1848714 - 426PF03573OprDouter membrane porin, OprD family2.20E-105
WP_016138815.1 1851373 1850026 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
5.40E-47
1.20E-24
4.20E-09
WP_016138816.1 1851890 1852967 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
5.50E-54
4.50E-18
2.50E-05
WP_016138817.1 1852979 1853924 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
9.50E-13
7.50E-06
WP_080645585.1 1854660 1853967 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
3.20E-11
4.50E-11
WP_016138819.1 1855239 1854783 - 151PF01047
PF12802
PF13412
PF01978
MarR
MarR_2
HTH_24
TrmB
MarR family
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
1.40E-09
1.00E-08
1.30E-04
8.20E-04
WP_016138820.1 1856542 1855309 - 410PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.60E-51
1.20E-22
6.20E-11
WP_171068109.1 1856790 1857630 + 279PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.80E-56
4.60E-26

Results for WP_016141789.1 [Acinetobacter pittii ANC 4050] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016141784.1 1908072 1909371 + 432PF07690
PF06779
PF12832
PF11700
MFS_1
MFS_4
MFS_1_like
ATG22
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Vacuole effluxer Atg22 like
1.30E-49
6.60E-07
2.50E-05
8.90E-04
WP_000356537.1 1909420 1910320 + 299PF05681FumeraseFumarate hydratase (Fumerase)2.80E-74
WP_000722967.1 1910316 1910925 + 202PF05683Fumerase_CFumarase C-terminus5.90E-41
WP_016141785.1 1911983 1910969 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.40E-33
2.50E-14
4.40E-04
WP_016141786.1 1912119 1913607 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
6.80E-20
9.10E-17
1.00E-11
2.80E-11
4.70E-09
WP_004702834.1 1913651 1914506 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.60E-50
3.70E-36
1.70E-11
WP_016141787.1 1914578 1915472 + 297PF07859
PF10340
PF20434
PF00326
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
6.30E-55
4.90E-10
7.40E-09
3.90E-06
WP_016141788.1 1915500 1917171 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.30E-17
1.10E-09
2.60E-05
5.50E-05
WP_016141789.1 1919436 1917237 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.50E-75
4.80E-73
1.80E-08
WP_016141790.1 1920969 1919688 - 426PF03573OprDouter membrane porin, OprD family5.70E-106
WP_016141791.1 1922347 1921000 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.60E-47
5.60E-24
9.10E-10
WP_016141792.1 1922720 1924406 + 561PF00884
PF01663
PF16347
Sulfatase
Phosphodiest
DUF4976
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
Domain of unknown function (DUF4976)
2.20E-77
3.20E-05
3.30E-05
WP_080649701.1 1924431 1925385 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.50E-67
WP_016141794.1 1925397 1926585 + 395PF03573OprDouter membrane porin, OprD family3.20E-34
WP_016141795.1 1926818 1927895 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
5.70E-54
9.40E-19
1.20E-05
WP_016141796.1 1927907 1928852 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.30E-12
4.80E-06
WP_080649494.1 1929588 1928895 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
4.00E-11
9.10E-11

Results for WP_016143277.1 [Acinetobacter lactucae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005802836.1 48563 49256 + 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10
WP_016143270.1 50244 49299 - 314PF00111
PF00175
PF08030
Fer2
NAD_binding_1
NAD_binding_6
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
Ferric reductase NAD binding domain
1.50E-12
3.90E-06
5.30E-04
WP_016143271.1 51333 50256 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
8.80E-54
9.00E-19
2.10E-05
WP_016143272.1 52752 51564 - 395PF03573OprDouter membrane porin, OprD family8.70E-36
WP_080648579.1 53718 52764 - 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 19.70E-68
WP_016143274.1 55429 53743 - 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
2.00E-75
2.20E-05
9.30E-05
WP_016143275.1 55804 57151 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
7.40E-48
1.30E-24
4.10E-10
WP_016143276.1 57182 58463 + 426PF03573OprDouter membrane porin, OprD family1.60E-105
WP_016143277.1 58715 60914 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-74
5.30E-73
1.70E-08
WP_016143278.1 62649 60978 - 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.70E-17
1.20E-09
2.60E-05
5.50E-05
WP_016143279.1 63570 62676 - 297PF07859
PF10340
PF20434
PF00326
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
6.70E-54
1.90E-10
1.30E-08
2.30E-06
WP_016143280.1 64497 63642 - 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
7.00E-51
2.20E-36
3.20E-11
WP_016143281.1 66029 64541 - 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
4.20E-20
9.80E-17
1.80E-11
2.80E-11
5.00E-09
WP_016143282.1 66163 67177 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.10E-38
1.80E-14
3.90E-05
WP_016143283.1 68063 67187 - 291PF04072LCMLeucine carboxyl methyltransferase3.80E-38
WP_016143284.1 69700 68176 - 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
4.90E-17
1.50E-14
7.50E-14
3.10E-10
4.30E-07
WP_016143285.1 70556 69722 - 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.90E-50
9.40E-43
2.40E-13

Results for WP_016163769.1 [Acinetobacter sp. ANC 3926] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016163762.1 92628 91914 - 237PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
2.00E-16
1.10E-04
5.80E-04
WP_241334047.1 93773 92753 - 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.30E-31
1.00E-12
1.20E-05
WP_016163764.1 93888 95421 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.30E-24
2.50E-17
4.20E-12
1.90E-10
9.60E-09
WP_016163765.1 95598 98082 + 827PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
4.10E-57
4.70E-45
2.40E-36
1.20E-10
8.30E-06
WP_016163766.1 98092 98551 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
6.00E-21
6.50E-18
4.20E-16
WP_004653564.1 98840 98651 - 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_016163767.1 99287 98945 - 113PF00111Fer22Fe-2S iron-sulfur cluster binding domain4.80E-10
WP_016163768.1 99706 99394 - 103PF03713DUF305Domain of unknown function (DUF305)5.10E-15
WP_016163769.1 102191 99986 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-75
1.20E-71
2.00E-08
WP_032882386.1 103311 102438 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-35
1.40E-18
WP_016163771.1 103400 104300 + 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.40E-47
1.50E-04
WP_016163772.1 104374 104734 + 119PF12840
PF01022
PF13463
PF13412
HTH_20
HTH_5
HTH_27
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
1.30E-14
6.10E-08
4.10E-05
5.30E-05
WP_016163773.1 104711 105182 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.90E-30
WP_016163774.1 106422 105255 - 388NO PFAM MATCH---
WP_016163775.1 107756 106421 - 444PF02321OEPOuter membrane efflux protein3.10E-46
WP_016163776.1 109339 107752 - 528PF03321GH3GH3 auxin-responsive promoter4.80E-79
WP_016163777.1 110157 109335 - 273NO PFAM MATCH---

Results for WP_016166530.1 [Acinetobacter tandoii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016166538.1 60806 62012 + 401PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
3.60E-28
4.10E-24
WP_026441089.1 62022 62946 + 307PF00491ArginaseArginase family3.60E-62
WP_016166536.1 63048 63687 + 212PF13419
PF12710
PF00702
PF13242
PF08282
HAD_2
HAD
Hydrolase
Hydrolase_like
Hydrolase_3
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
8.70E-35
1.80E-10
7.40E-09
1.10E-07
1.60E-05
WP_016166535.1 63710 64511 + 266PF01177Asp_Glu_raceAsp/Glu/Hydantoin racemase1.60E-27
WP_026441088.1 64841 66239 + 465PF00120Gln-synt_CGlutamine synthetase, catalytic domain5.30E-80
WP_035302224.1 66565 66988 + 140PF11162DUF2946Protein of unknown function (DUF2946)3.40E-05
WP_081401226.1 67066 69247 + 726PF00593
PF07715
PF13505
TonB_dep_Rec
Plug
OMP_b-brl
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel domain
2.30E-51
4.30E-15
9.20E-05
WP_016166531.1 69247 69703 + 151PF04170NlpENlpE N-terminal domain1.10E-06
WP_016166530.1 70130 72350 + 739PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.20E-77
1.00E-70
3.20E-08
WP_016166529.1 72998 74315 + 438PF07992
PF00070
PF13454
PF05834
PF01266
Pyr_redox_2
Pyr_redox
NAD_binding_9
Lycopene_cycl
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD-NAD(P)-binding
Lycopene cyclase protein
FAD dependent oxidoreductase
2.70E-55
4.30E-14
3.70E-08
2.30E-04
3.00E-04
WP_016166528.1 74693 75680 + 328PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
2.00E-27
9.50E-21
4.70E-08
WP_016166527.1 75692 76541 + 282PF02668TauDTaurine catabolism dioxygenase TauD, TfdA family2.50E-58
WP_016166526.1 76601 77705 + 367PF05853BKACEbeta-keto acid cleavage enzyme3.50E-60
WP_016166525.1 77851 79183 + 443PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
6.10E-51
1.90E-13
6.40E-11
9.90E-05
WP_016166524.1 79182 79836 + 217PF01323DSBADSBA-like thioredoxin domain2.60E-23
WP_016166523.1 79832 80150 + 105PF00355
PF13806
Rieske
Rieske_2
Rieske [2Fe-2S] domain
Rieske-like [2Fe-2S] domain
5.70E-12
2.30E-10
WP_026441084.1 80178 81180 + 333PF03601Cons_hypoth698Conserved hypothetical protein 6981.90E-70

Results for WP_016358008.1 [Methanobrevibacter sp. AbM4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016358000.1 482883 481698 - 394PF12102MrcB_NMrcB-like, N-terminal domain3.00E-05
WP_016358001.1 483357 482976 - 126PF13240
PF13248
PF10571
PF17032
zinc_ribbon_2
zf-ribbon_3
UPF0547
zinc_ribbon_15
zinc-ribbon domain
zinc-ribbon domain
Uncharacterised protein family UPF0547
zinc-ribbon family
2.40E-06
8.30E-06
3.50E-05
2.50E-04
WP_016358002.1 483789 484989 + 399PF01979Amidohydro_1Amidohydrolase family9.90E-31
WP_016358003.1 485185 485617 + 143PF00582UspUniversal stress protein family7.50E-36
WP_016358004.1 485850 486696 + 281PF00571CBSCBS domain2.50E-40
WP_016358005.1 486873 487395 + 173NO PFAM MATCH---
WP_016358006.1 488975 487922 - 350PF06508
PF01171
PF02568
QueC
ATP_bind_3
ThiI
Queuosine biosynthesis protein QueC
PP-loop family
Thiamine biosynthesis protein (ThiI)
1.50E-05
2.40E-04
7.10E-04
WP_016358007.1 489784 489130 - 217PF07812TfuATfuA-like protein1.10E-46
WP_016358008.1 491258 490037 - 406PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-90
WP_016358009.1 492051 491421 - 209PF02163Peptidase_M50Peptidase family M505.70E-05
WP_016358010.1 492493 493552 + 352PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
1.20E-54
4.20E-11
WP_016358011.1 493825 494755 + 309PF00482T2SSFType II secretion system (T2SS), protein F1.50E-18
WP_040682493.1 494952 495159 + 68PF04021Class_IIIsignalClass III signal peptide5.20E-04
WP_016358012.1 495250 496663 + 470PF00171
PF05893
Aldedh
LuxC
Aldehyde dehydrogenase family
Acyl-CoA reductase (LuxC)
7.40E-161
1.10E-07
WP_016358013.1 498414 497004 - 469PF07690
PF00083
PF12832
PF05977
MFS_1
Sugar_tr
MFS_1_like
MFS_3
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
Transmembrane secretion effector
1.90E-48
1.00E-09
3.90E-06
1.80E-04
WP_016358014.1 499324 498598 - 241PF18489
PF01588
Alpha_Helical
tRNA_bind
Alpha helical domain
Putative tRNA binding domain
8.10E-57
4.30E-14
WP_016358015.1 499764 500181 + 138PF05239PRCPRC-barrel domain7.60E-09

Results for WP_020449401.1 [Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048134047.1 1546927 1547107 + 59NO PFAM MATCH---
WP_020449394.1 1547180 1547564 + 127NO PFAM MATCH---
WP_020449395.1 1548208 1547932 - 91PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)5.70E-23
WP_020449396.1 1549875 1548219 - 551PF02745
PF02249
MCR_alpha_N
MCR_alpha
Methyl-coenzyme M reductase alpha subunit, N-terminal domain
Methyl-coenzyme M reductase alpha subunit, C-terminal domain
2.50E-150
3.20E-67
WP_020449397.1 1550651 1549877 - 257PF02240MCR_gammaMethyl-coenzyme M reductase gamma subunit7.80E-132
WP_020449398.1 1551077 1550663 - 137PF02505MCR_DMethyl-coenzyme M reductase operon protein D5.90E-40
WP_020449399.1 1552419 1551096 - 440PF02241
PF02783
MCR_beta
MCR_beta_N
Methyl-coenzyme M reductase beta subunit, C-terminal domain
Methyl-coenzyme M reductase beta subunit, N-terminal domain
4.10E-139
4.20E-78
WP_020449400.1 1553302 1552672 - 209PF07812TfuATfuA-like protein2.20E-41
WP_020449401.1 1554498 1553298 - 399PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.00E-88
WP_020449402.1 1554536 1555430 + 297NO PFAM MATCH---
WP_020449403.1 1555573 1556185 + 203NO PFAM MATCH---
WP_020449404.1 1556746 1556281 - 154PF01037
PF13404
PF13412
PF01047
PF08279
AsnC_trans_reg
HTH_AsnC-type
HTH_24
MarR
HTH_11
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
HTH domain
5.30E-13
3.80E-12
5.10E-12
8.40E-07
3.60E-06
WP_020449405.1 1557344 1557083 - 86NO PFAM MATCH---
WP_048134049.1 1557480 1557756 + 91PF13601
PF14277
HTH_34
DUF4364
Winged helix DNA-binding domain
Domain of unknown function (DUF4364)
2.90E-05
4.70E-04
WP_020449407.1 1559577 1557939 - 545PF14574
PF17651
PF12838
PF00037
PF14697
RACo_C_ter
Raco_middle
Fer4_7
Fer4
Fer4_21
C-terminal domain of RACo the ASKHA domain
RACo middle region
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
1.90E-70
7.80E-14
1.40E-07
2.40E-07
3.10E-06
WP_020449408.1 1560682 1559683 - 332PF01208URO-DUroporphyrinogen decarboxylase (URO-D)4.80E-80
WP_020449409.1 1561511 1560866 - 214PF02310
PF02607
B12-binding
B12-binding_2
B12 binding domain
B12 binding domain
3.80E-18
3.30E-17

Results for WP_016487485.1 [Pseudomonas sp. NMI4491_12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012052026.1 0 1017 + 339INFERRED GENE---
WP_232895571.1 1019 1901 + 293PF20455DUF6708Family of unknown function (DUF6708)7.70E-08
WP_269807504.1 2688 1887 - 266PF08241
PF13649
PF01209
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
1.30E-22
9.40E-22
5.30E-16
2.90E-13
3.90E-08
WP_016487485.1 5170 2983 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.90E-73
1.40E-72
7.30E-08
WP_232895572.1 5513 5969 + 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
8.50E-22
6.20E-08
4.00E-05
WP_232895573.1 5968 8218 + 749PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
1.20E-33
2.70E-29
2.90E-04
WP_095115131.1 8236 9580 + 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
1.10E-23
6.20E-22
WP_023048921.1 10961 10172 - 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
1.90E-27
6.80E-04
WP_016487492.1 11772 11130 - 213PF01810LysELysE type translocator7.30E-30
WP_016487493.1 12021 11823 - 65PF06945DUF1289Protein of unknown function (DUF1289)1.40E-15
WP_016487494.1 12347 12029 - 105NO PFAM MATCH---
WP_060518305.1 12657 14406 + 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter3.80E-177

Results for WP_006966797.1 [Desulfotignum phosphitoxidans DSM 13687] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006966789.1 157280 158222 + 313PF07726
PF17863
PF07728
PF20030
PF05496
AAA_3
AAA_lid_2
AAA_5
bpMoxR
RuvB_N
ATPase family associated with various cellular activities (AAA)
AAA lid domain
AAA domain (dynein-related subfamily)
MoxR domain in the MoxR-vWA-beta-propeller ternary systems
Holliday junction DNA helicase RuvB P-loop domain
4.00E-62
1.30E-16
8.30E-11
9.00E-07
1.90E-06
WP_006966790.1 158246 159146 + 299PF01882DUF58Protein of unknown function DUF583.50E-07
WP_006966791.1 159142 161098 + 651PF11992
PF01841
PF13559
TgpA_N
Transglut_core
DUF4129
TgpA N-terminal domain
Transglutaminase-like superfamily
Domain of unknown function (DUF4129)
1.20E-64
1.00E-21
8.30E-08
WP_006966792.1 161097 162249 + 383PF14815
PF00730
PF00293
PF00633
NUDIX_4
HhH-GPD
NUDIX
HHH
NUDIX domain
HhH-GPD superfamily base excision DNA repair protein
NUDIX domain
Helix-hairpin-helix motif
3.80E-23
9.00E-20
2.00E-17
1.00E-04
WP_006966793.1 162260 163166 + 301PF01545
PF16916
Cation_efflux
ZT_dimer
Cation efflux family
Dimerisation domain of Zinc Transporter
6.80E-46
1.80E-23
WP_006966794.1 163255 163831 + 191PF08281
PF04545
PF04542
PF07638
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
Sigma-70, region 4
Sigma-70, region 4
Sigma-70 region 2
ECF sigma factor
1.70E-14
1.40E-11
1.30E-10
9.70E-04
WP_006966795.1 163834 164188 + 117NO PFAM MATCH---
WP_006966796.1 164259 164691 + 143PF03473MOSCMOSC domain1.70E-07
WP_006966797.1 164771 166505 + 577PF02624
PF00515
PF07719
PF13181
PF13424
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.30E-68
3.30E-26
1.70E-20
7.30E-17
8.40E-17
WP_006966798.1 167539 166516 - 340PF04055Radical_SAMRadical SAM superfamily1.10E-16
WP_006966799.1 167858 170087 + 742PF08269
PF17200
PF17201
PF00672
PF07730
dCache_2
sCache_2
Cache_3-Cache_2
HAMP
HisKA_3
Cache domain
Single Cache domain 2
Cache 3/Cache 2 fusion domain
HAMP domain
Histidine kinase
1.20E-66
1.70E-48
1.00E-42
3.60E-12
4.10E-08
WP_006966800.1 170089 170761 + 223PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
8.40E-26
1.40E-13
5.00E-05
WP_006966801.1 170874 172521 + 548PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
6.50E-95
1.50E-16
WP_006966802.1 173427 172704 - 240PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.00E-32
5.80E-19
WP_006966803.1 174634 173533 - 366PF02388
PF13480
PF04339
FemAB
Acetyltransf_6
FemAB_like
FemAB family
Acetyltransferase (GNAT) domain
Peptidogalycan biosysnthesis/recognition
1.60E-43
1.70E-10
7.70E-04
WP_006966804.1 174775 176023 + 415PF01053
PF00155
PF00266
PF01212
PF02347
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
GDC-P
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
Aminotransferase class-V
Beta-eliminating lyase
Glycine cleavage system P-protein
2.60E-120
3.60E-11
1.90E-06
3.20E-04
6.90E-04
WP_006966805.1 176025 177201 + 391PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
3.00E-39
1.20E-04
9.40E-04

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001528602.1 back to top

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Couldn't process WP_001528602.1 Genbank filestream. May be corrupt.

Results for WP_000194829.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_020799733.1 [Pseudomonas umsongensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020799740.1 5843762 5842472 - 429PF05201
PF01488
PF00745
GlutR_N
Shikimate_DH
GlutR_dimer
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
5.40E-51
2.80E-47
5.60E-22
WP_033041358.1 5844076 5845801 + 574PF13428
PF14559
PF13432
PF07719
PF13174
TPR_14
TPR_19
TPR_16
TPR_2
TPR_6
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.70E-30
4.90E-26
7.50E-23
1.60E-19
3.60E-18
WP_033041357.1 5845805 5846423 + 205PF03550LolBOuter membrane lipoprotein LolB2.20E-50
WP_168758943.1 5846424 5847276 + 283PF00288
PF08544
GHMP_kinases_N
GHMP_kinases_C
GHMP kinases N terminal domain
GHMP kinases C terminal
2.50E-10
2.10E-05
WP_003171603.1 5847433 5848375 + 313PF13793
PF14572
PF00156
Pribosyltran_N
Pribosyl_synth
Pribosyltran
N-terminal domain of ribose phosphate pyrophosphokinase
Phosphoribosyl synthetase-associated domain
Phosphoribosyl transferase domain
4.70E-50
4.20E-35
1.00E-20
WP_007981839.1 5848517 5849117 + 199PF14693
PF01386
Ribosomal_TL5_C
Ribosomal_L25p
Ribosomal protein TL5, C-terminal domain
Ribosomal L25p family
8.40E-28
4.30E-26
WP_020799735.1 5849286 5849871 + 194PF01195Pept_tRNA_hydroPeptidyl-tRNA hydrolase2.10E-60
WP_168758944.1 5849893 5850994 + 366PF06071
PF01926
PF02421
YchF-GTPase_C
MMR_HSR1
FeoB_N
Protein of unknown function (DUF933)
50S ribosome-binding GTPase
Ferrous iron transport protein B
2.30E-40
3.00E-22
1.30E-07
WP_020799733.1 5853260 5851058 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.40E-73
9.40E-73
1.20E-07
WP_168758945.1 5854578 5853360 - 405PF07690MFS_1Major Facilitator Superfamily2.20E-33
WP_168758946.1 5856189 5855079 - 369PF10994
PF04952
DUF2817
AstE_AspA
Protein of unknown function (DUF2817)
Succinylglutamate desuccinylase / Aspartoacylase family
1.10E-106
4.70E-04
WP_168758947.1 5856343 5858176 + 610PF01019G_glu_transpeptGamma-glutamyltranspeptidase4.80E-150
WP_020799729.1 5859322 5858227 - 364PF07478
PF01820
PF02222
PF13535
PF02786
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
D-ala D-ala ligase C-terminus
D-ala D-ala ligase N-terminus
ATP-grasp domain
ATP-grasp domain
Carbamoyl-phosphate synthase L chain, ATP binding domain
9.70E-77
1.50E-30
7.50E-13
1.20E-06
1.20E-05
WP_020799728.1 5860726 5859409 - 438PF00015
PF08447
PF08448
PF13426
PF00989
MCPsignal
PAS_3
PAS_4
PAS_9
PAS
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS fold
PAS domain
PAS fold
1.20E-35
3.80E-24
6.00E-24
2.40E-23
3.90E-15
WP_042955697.1 5862168 5860854 - 437PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
5.30E-29
2.60E-20
WP_033039034.1 5862368 5863787 + 472PF02667
PF03606
SCFA_trans
DcuC
Short chain fatty acid transporter
C4-dicarboxylate anaerobic carrier
1.30E-86
8.60E-05
WP_168758948.1 5863954 5864275 + 106NO PFAM MATCH---

Results for WP_020797974.1 [Pseudomonas umsongensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008064568.1 6429263 6428789 - 157PF13412
PF01037
PF13404
PF12840
HTH_24
AsnC_trans_reg
HTH_AsnC-type
HTH_20
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Helix-turn-helix domain
4.00E-20
7.00E-20
9.70E-18
2.00E-05
WP_020797966.1 6429409 6430039 + 209PF01810LysELysE type translocator1.80E-39
WP_151143767.1 6432172 6430042 - 709PF13181TPR_8Tetratricopeptide repeat1.30E-05
WP_151143769.1 6433355 6432158 - 398PF11340DUF3142Protein of unknown function (DUF3142)7.80E-89
WP_151143771.1 6435498 6433467 - 676PF01243
PF00970
PF00111
PF00175
PF08030
Putative_PNPOx
FAD_binding_6
Fer2
NAD_binding_1
NAD_binding_6
Pyridoxamine 5'-phosphate oxidase
Oxidoreductase FAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
Ferric reductase NAD binding domain
4.90E-22
2.70E-10
3.00E-10
3.60E-09
3.10E-04
WP_020797970.1 6436188 6435561 - 208PF02798
PF13417
PF13409
PF00043
PF13410
GST_N
GST_N_3
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
3.30E-17
2.60E-15
5.20E-14
5.60E-08
1.60E-07
WP_020797972.1 6437222 6436319 - 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.90E-30
1.40E-16
WP_020797973.1 6437777 6437948 + 56NO PFAM MATCH---
WP_020797974.1 6438036 6439254 + 405PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-51
WP_083349937.1 6439234 6439915 + 226PF07812TfuATfuA-like protein1.50E-37
WP_020797976.1 6440144 6440675 + 176NO PFAM MATCH---
WP_020797977.1 6440684 6440957 + 90PF02597ThiSThiS family4.10E-05
WP_020797978.1 6440958 6442086 + 375PF00899
PF00581
ThiF
Rhodanese
ThiF family
Rhodanese-like domain
2.70E-58
2.80E-07
WP_263863808.1 6442131 6442263 + 43NO PFAM MATCH---
WP_225441864.1 6442307 6442667 + 119PF05717TnpB_IS66IS66 Orf2 like protein2.00E-33
WP_151141078.1 6442685 6444218 + 510PF03050
PF13007
PF13817
PF13005
DDE_Tnp_IS66
LZ_Tnp_IS66
DDE_Tnp_IS66_C
zf-IS66
Transposase IS66 family
Transposase C of IS166 homeodomain
IS66 C-terminal element
zinc-finger binding domain of transposase IS66
3.60E-103
1.30E-16
1.60E-16
1.70E-12
WP_151143772.1 6444264 6445485 + 406PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
9.70E-17
5.80E-08

Results for WP_016392143.1 [Pseudomonas plecoglossicida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016392135.1 2506970 2507291 + 106NO PFAM MATCH---
WP_016392136.1 2507517 2508114 + 198PF04403PqiAParaquat-inducible protein A8.30E-38
WP_016392137.1 2508110 2508755 + 214PF04403PqiAParaquat-inducible protein A5.90E-53
WP_016392138.1 2508738 2510379 + 546PF02470
PF04108
MlaD
ATG17_like
MlaD protein
Autophagy protein ATG17-like domain
1.20E-37
5.70E-04
WP_016392139.1 2510406 2510949 + 180PF03886ABC_trans_auxABC-type transport auxiliary lipoprotein component3.70E-26
WP_016392140.1 2512307 2510960 - 448PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
3.10E-26
1.30E-22
WP_016392141.1 2514569 2512325 - 747PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
1.90E-32
1.40E-30
WP_016392142.1 2515024 2514568 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.80E-23
1.20E-07
3.50E-05
WP_016392143.1 2515271 2517458 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-73
3.10E-71
3.80E-08
WP_016392144.1 2517674 2518487 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
3.90E-22
1.70E-21
2.40E-15
1.40E-13
1.50E-09
WP_156042676.1 2518596 2518749 + 50NO PFAM MATCH---
WP_016392145.1 2519086 2518789 - 98PF13827DUF4189Domain of unknown function (DUF4189)4.40E-06
WP_116131179.1 2520675 2519346 - 442PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
2.20E-21
1.80E-12
WP_016392544.1 2523156 2521035 - 706PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.00E-54
4.80E-23
WP_016392545.1 2523368 2523950 + 193NO PFAM MATCH---
WP_016392546.1 2524086 2524605 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ7.10E-42
WP_016392547.1 2525514 2524605 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.80E-23
1.10E-13

Results for WP_016414738.1 [Halomonas anticariensis FP35 = DSM 16096] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016414745.1 1578 1872 + 97NO PFAM MATCH---
WP_016414744.1 2508 2022 - 161PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase8.50E-49
WP_016414743.1 3307 2638 - 222PF01872RibD_CRibD C-terminal domain5.60E-25
WP_016414742.1 3991 3508 - 160NO PFAM MATCH---
WP_016414741.1 4438 4075 - 120PF06993DUF1304Protein of unknown function (DUF1304)5.40E-39
WP_016414740.1 4974 5430 + 151NO PFAM MATCH---
WP_019592613.1 5527 5605 + 26INFERRED GENE---
WP_016414739.1 5872 5629 - 80PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system1.60E-16
WP_016414738.1 8254 6061 - 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.40E-76
1.60E-73
3.60E-08
WP_016414737.1 8910 8379 - 176PF00583
PF13508
PF13527
PF13673
PF13480
Acetyltransf_1
Acetyltransf_7
Acetyltransf_9
Acetyltransf_10
Acetyltransf_6
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
2.50E-11
4.70E-11
7.50E-10
6.50E-07
3.00E-05
WP_016414736.1 9008 9602 + 197PF01810
PF11139
LysE
SfLAP
LysE type translocator
Sap, sulfolipid-1-addressing protein
1.10E-19
5.00E-05
WP_016414735.1 10421 9563 - 285PF12833
PF00165
PF02311
HTH_18
HTH_AraC
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-like ligand binding domain
9.30E-22
2.10E-21
2.30E-16
WP_021029070.1 11171 10859 - 103NO PFAM MATCH---
WP_016414732.1 11730 11277 - 150PF19694DUF6194Family of unknown function (DUF6194)3.50E-45
WP_021029069.1 12353 11732 - 206PF00881NitroreductaseNitroreductase family5.30E-22
WP_016414730.1 13407 12678 - 242PF00194Carb_anhydraseEukaryotic-type carbonic anhydrase2.10E-44
WP_016414729.1 14741 13472 - 422PF02518
PF00512
PF00672
HATPase_c
HisKA
HAMP
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
5.90E-18
5.00E-09
3.10E-04

Results for WP_016435285.1 [Streptomyces sp. HGB0020] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016435277.1 772077 772518 + 146PF13577SnoaL_4SnoaL-like domain9.50E-20
WP_016435278.1 772955 772691 - 87PF00550PP-bindingPhosphopantetheine attachment site9.40E-11
WP_016435279.1 774226 772990 - 411PF00109
PF02801
ketoacyl-synt
Ketoacyl-synt_C
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
9.50E-43
5.30E-20
WP_016435280.1 775497 774222 - 424PF00109
PF02801
ketoacyl-synt
Ketoacyl-synt_C
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
9.00E-56
8.30E-33
WP_016435281.1 776385 775557 - 275PF00975
PF12697
PF00561
PF12146
Thioesterase
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Thioesterase domain
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
4.10E-32
1.70E-07
2.80E-06
2.20E-04
WP_016435282.1 777152 776381 - 256PF04199CyclasePutative cyclase1.40E-31
WP_016435283.1 778171 777352 - 272PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
2.60E-47
8.40E-09
WP_016435284.1 778449 778608 + 52NO PFAM MATCH---
WP_016435285.1 778607 780908 + 766PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-99
WP_016435286.1 780950 781628 + 225NO PFAM MATCH---
WP_051183626.1 781680 784053 + 790PF07730HisKA_3Histidine kinase1.90E-32
WP_016435288.1 784733 784121 - 203PF00072
PF00196
PF08281
PF04545
PF08448
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
PAS_4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
PAS fold
4.10E-19
1.50E-16
2.30E-05
7.00E-05
3.10E-04
WP_037782436.1 784975 785269 + 97PF19534DUF6059Family of unknown function (DUF6059)1.10E-15
WP_016435290.1 785357 787082 + 574PF00501AMP-bindingAMP-binding enzyme5.60E-75
WP_016435291.1 787078 788860 + 593PF02770
PF00441
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.60E-06
2.70E-04
WP_016435292.1 788856 789684 + 275PF01648ACPS4'-phosphopantetheinyl transferase superfamily7.60E-14
WP_016435293.1 790156 789889 - 88PF01649Ribosomal_S20pRibosomal protein S201.70E-26

Results for WP_016554067.1 back to top

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Couldn't process WP_016554067.1 Genbank filestream. May be corrupt.

Results for WP_016468333.1 [Streptomyces albus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016468341.1 5817872 5818739 + 288PF001982-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)1.40E-14
WP_019358474.1 5818635 5819469 + 278INFERRED GENE---
WP_037613461.1 5819962 5821231 + 422PF01494
PF01266
PF12831
PF13450
PF07992
FAD_binding_3
DAO
FAD_oxidored
NAD_binding_8
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
1.20E-29
1.00E-08
5.20E-06
2.20E-04
3.10E-04
WP_135566597.1 5821227 5822358 + 376PF06500FrsA-likeEsterase FrsA-like5.60E-12
WP_135566598.1 5822354 5822732 + 125PF14079DUF4260Domain of unknown function (DUF4260)2.20E-09
WP_051173454.1 5824083 5822832 - 416PF00067p450Cytochrome P4501.20E-38
WP_016468335.1 5824242 5824848 + 201PF00072
PF00196
Response_reg
GerE
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
8.30E-19
9.60E-15
WP_157846433.1 5826027 5824869 - 385PF07730HisKA_3Histidine kinase7.60E-17
WP_016468333.1 5828475 5826159 - 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-101
WP_016468332.1 5828876 5828501 - 124NO PFAM MATCH---
WP_016468331.1 5829173 5830037 + 287PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
1.80E-46
1.90E-09
WP_016468330.1 5830149 5830974 + 274PF00975ThioesteraseThioesterase domain1.70E-29
WP_016468329.1 5831117 5831990 + 290PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
6.80E-50
1.40E-08
WP_234029747.1 5833005 5832771 - 77PF19565DUF6087Family of unknown function (DUF6087)2.10E-08
WP_016468327.1 5833195 5833405 + 69PF04149DUF397Domain of unknown function (DUF397)1.50E-19
WP_030406240.1 5833984 5833528 - 151PF08592Anthrone_oxyAnthrone oxygenase1.30E-08
WP_016468325.1 5834376 5833995 - 126PF04486
PF04673
SchA_CurD
Cyclase_polyket
SchA/CurD like domain
Polyketide synthesis cyclase
1.20E-49
1.90E-04

Results for WP_016515303.1 [Microcystis aeruginosa SPC777] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016516498.1 0 530 + 176INFERRED GENE---
WP_016515302.1 1290 3264 + 657PF18065
PF00082
PF18047
PatG_C
Peptidase_S8
PatG_D
PatG C-terminal
Subtilase family
PatG Domain
2.50E-37
1.70E-34
1.60E-19
WP_002796592.1 3369 3621 + 83NO PFAM MATCH---
WP_002781476.1 3671 3914 + 80NO PFAM MATCH---
WP_016515303.1 3972 6303 + 776PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-97
WP_016515304.1 6434 6686 + 83PF19155DUF5837Family of unknown function (DUF5837)5.30E-21
WP_016515305.1 6980 7946 + 321PF19156DUF5838Family of unknown function (DUF5838)6.30E-83
WP_016515306.1 7998 8802 + 267PF19147DUF5829Family of unknown function (DUF5829)3.90E-48
WP_002734633.1 9701 9041 - 219PF14907
PF08843
NTP_transf_5
AbiEii
Uncharacterised nucleotidyltransferase
Nucleotidyl transferase AbiEii toxin, Type IV TA system
1.20E-05
1.90E-04
WP_016515307.1 9741 13683 + 1313PF18065
PF00082
PF18047
PF00881
PF18679
PatG_C
Peptidase_S8
PatG_D
Nitroreductase
HTH_57
PatG C-terminal
Subtilase family
PatG Domain
Nitroreductase family
ThcOx helix turn helix domain
8.10E-31
4.30E-20
9.40E-17
1.10E-15
2.40E-09

Results for WP_016558002.1 [Rhizobium grahamii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016557993.1 555397 554494 - 300PF19368AraR_CAraR C-terminal winged HTH domain1.80E-06
WP_244919863.1 555504 555768 + 87NO PFAM MATCH---
WP_114714925.1 556836 557118 + 93NO PFAM MATCH---
WP_114714926.1 557546 557726 + 59NO PFAM MATCH---
WP_016557998.1 557876 557726 - 49NO PFAM MATCH---
WP_016557999.1 558603 558996 + 130PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
2.40E-12
1.20E-07
3.40E-07
WP_016558000.1 559291 559021 - 89NO PFAM MATCH---
WP_016558001.1 560103 559356 - 248PF07812TfuATfuA-like protein9.10E-41
WP_016558002.1 561353 560099 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.80E-67
WP_016558003.1 563568 561621 - 648PF03704
PF07719
PF13432
PF13428
PF14559
BTAD
TPR_2
TPR_16
TPR_14
TPR_19
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.00E-12
7.30E-09
9.60E-07
2.50E-05
7.70E-05
WP_016558004.1 564819 563778 - 346PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
1.10E-16
1.70E-15
WP_016558005.1 565294 565498 + 67PF10931DUF2735Protein of unknown function (DUF2735)5.40E-11
WP_114714927.1 565669 566899 + 409PF03486
PF01266
PF13450
PF00070
PF01494
HI0933_like
DAO
NAD_binding_8
Pyr_redox
FAD_binding_3
HI0933-like protein
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
3.70E-98
6.50E-06
1.70E-05
1.80E-04
4.30E-04
WP_016558007.1 567811 566986 - 274PF02548Pantoate_transfKetopantoate hydroxymethyltransferase1.50E-104
WP_114714928.1 568686 567810 - 291PF02569Pantoate_ligasePantoate-beta-alanine ligase4.60E-100
WP_016558009.1 569043 569712 + 222PF00226DnaJDnaJ domain3.20E-17
WP_016558010.1 570744 569742 - 333PF04280Tim44Tim44-like domain1.40E-26

Results for WP_016535616.1 [Cedecea davisae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_227317808.1 1473539 1472555 - 327PF02606
PF13439
LpxK
Glyco_transf_4
Tetraacyldisaccharide-1-P 4'-kinase
Glycosyltransferase Family 4
1.20E-114
5.80E-04
WP_216376972.1 1475284 1473535 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
1.40E-56
4.00E-35
5.90E-10
1.90E-05
3.20E-05
WP_227317809.1 1477589 1475321 - 755PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.50E-48
8.70E-15
7.30E-05
WP_172567938.1 1478074 1477789 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.50E-29
7.60E-08
5.30E-04
WP_016535621.1 1479863 1478189 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.90E-98
8.90E-12
2.40E-07
WP_216376974.1 1480665 1479981 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
9.10E-85
2.90E-07
2.00E-04
7.70E-04
8.10E-04
WP_227318000.1 1482141 1480857 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.70E-149
WP_227317810.1 1483304 1482218 - 361PF00266Aminotran_5Aminotransferase class-V4.80E-67
WP_016535616.1 1483611 1485375 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.90E-83
1.00E-67
NP_459949.1 1485776 1486634 + 286INFERRED GENE---
WP_016535614.1 1486685 1488968 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.10E-206
2.60E-43
WP_216376976.1 1489161 1489902 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.10E-32
1.30E-18
3.80E-06
WP_216376977.1 1490815 1489933 - 293PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
3.70E-15
8.80E-10
WP_227317811.1 1492059 1490910 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.90E-33
2.90E-11
6.50E-08
9.40E-05
WP_227317812.1 1493216 1492355 - 286PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
3.80E-107
7.10E-04
WP_016535609.1 1493835 1493217 - 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
5.30E-28
4.70E-13
7.20E-13
2.50E-12
1.80E-11
WP_227317813.1 1496287 1493845 - 813PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
3.70E-109
5.40E-27
2.10E-17

Results for WP_016655290.1 [Acinetobacter rudis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016655282.1 10427 11813 + 461PF00208
PF02812
ELFV_dehydrog
ELFV_dehydrog_N
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
8.90E-84
1.50E-47
WP_016655283.1 12658 11881 - 258PF14302
PF03724
DUF4377
META
Domain of unknown function (DUF4377)
META domain
6.80E-26
3.70E-14
WP_016655284.1 13567 12793 - 257PF02900LigBCatalytic LigB subunit of aromatic ring-opening dioxygenase2.10E-42
WP_016655285.1 14162 13679 - 160PF02590SPOUT_MTasePredicted SPOUT methyltransferase5.90E-52
WP_016655286.1 16851 14424 - 808PF05362
PF02190
PF00004
PF07728
PF08298
Lon_C
LON_substr_bdg
AAA
AAA_5
AAA_PrkA
Lon protease (S16) C-terminal proteolytic domain
ATP-dependent protease La (LON) substrate-binding domain
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
PrkA AAA domain
2.80E-86
1.20E-29
4.30E-21
4.00E-09
1.30E-07
WP_016655287.1 17583 17001 - 193PF018125-FTHF_cyc-lig5-formyltetrahydrofolate cyclo-ligase family1.00E-35
WP_016655288.1 17795 18050 + 84NO PFAM MATCH---
WP_016655289.1 18308 18119 - 62PF05901ExcaliburExcalibur calcium-binding domain8.50E-07
WP_016655290.1 20688 18477 - 736PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-74
1.30E-73
1.30E-08
WP_016655291.1 21341 20999 - 113PF18977DUF5713Family of unknown function (DUF5713)1.50E-48
WP_016655292.1 21862 21406 - 151NO PFAM MATCH---
WP_016655293.1 22771 21904 - 288PF08238Sel1Sel1 repeat5.00E-30
WP_155766232.1 22925 23075 + 49NO PFAM MATCH---
WP_016655295.1 23629 23980 + 116NO PFAM MATCH---
WP_162183604.1 23993 24155 + 53NO PFAM MATCH---
WP_016655297.1 24870 24525 - 114NO PFAM MATCH---
WP_040331054.1 26078 24866 - 403PF13356
PF00589
PF14659
Arm-DNA-bind_3
Phage_integrase
Phage_int_SAM_3
Arm DNA-binding domain
Phage integrase family
Phage integrase, N-terminal SAM-like domain
5.60E-17
2.90E-14
4.30E-06

Results for WP_002407755.1 back to top

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Couldn't process WP_002407755.1 Genbank filestream. May be corrupt.

Results for WP_016652402.1 [Acinetobacter colistiniresistens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032862191.1 1530 66 - 487PF01425AmidaseAmidase1.20E-89
WP_016652407.1 2330 1616 - 237PF00196GerEBacterial regulatory proteins, luxR family2.50E-18
WP_016652406.1 3471 2451 - 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.40E-31
3.50E-11
9.70E-07
WP_016652405.1 3586 5119 + 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
3.00E-24
1.20E-16
4.70E-14
3.60E-11
2.30E-09
WP_016652404.1 5301 7788 + 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
6.60E-56
3.20E-46
5.50E-36
9.70E-10
1.00E-05
WP_016652403.1 7799 8258 + 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
4.60E-21
1.20E-17
3.40E-16
WP_005241661.1 8539 8350 - 62PF00403HMAHeavy-metal-associated domain2.00E-11
WP_016652402.1 10907 8702 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.10E-74
7.90E-72
2.00E-08
WP_016652401.1 12038 11165 - 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.30E-37
1.90E-17
WP_016652400.1 12127 13021 + 297PF00892EamAEamA-like transporter family2.30E-50
WP_005241666.1 13113 13473 + 119PF12840
PF01022
PF13412
PF13463
PF01047
HTH_20
HTH_5
HTH_24
HTH_27
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
Winged helix DNA-binding domain
MarR family
1.20E-15
2.20E-09
2.60E-06
1.80E-04
9.70E-04
WP_016652399.1 13450 13921 + 156PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein6.70E-31
YP_004995501.1 13988 14178 + 63INFERRED GENE---

Results for WP_016640787.1 [Streptomyces aurantiacus JA 4570] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037659054.1 44510 43187 - 440PF03721
PF00984
PF03720
UDPG_MGDP_dh_N
UDPG_MGDP_dh
UDPG_MGDP_dh_C
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
1.50E-50
3.10E-28
6.20E-12
WP_037659057.1 46062 44583 - 492PF02397
PF13727
Bac_transf
CoA_binding_3
Bacterial sugar transferase
CoA-binding domain
1.60E-61
5.00E-06
WP_016640781.1 46770 47226 + 151PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.80E-21
3.20E-15
WP_016640782.1 48698 47216 - 493PF00881NitroreductaseNitroreductase family3.20E-20
WP_158692067.1 49870 48694 - 391NO PFAM MATCH---
WP_016640784.1 50834 49877 - 318NO PFAM MATCH---
WP_016640785.1 51616 50830 - 261PF19369DUF5944Family of unknown function (DUF5944)6.50E-101
WP_016640786.1 53133 51612 - 506PF00067p450Cytochrome P4506.30E-57
WP_016640787.1 54589 53158 - 476PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-56
WP_016640788.1 54807 54681 - 41NO PFAM MATCH---
WP_016640789.1 55681 54781 - 299PF08007
PF13621
JmjC_2
Cupin_8
JmjC domain
Cupin-like domain
2.50E-17
3.40E-05
WP_016640790.1 57038 56369 - 222PF01810LysELysE type translocator5.90E-25
WP_037659062.1 57225 58023 + 265NO PFAM MATCH---
WP_016640792.1 58142 59453 + 436PF01179Cu_amine_oxidCopper amine oxidase, enzyme domain4.40E-34
WP_016640793.1 59583 63438 + 1284PF00400
PF12894
PF07676
PF01381
WD40
ANAPC4_WD40
PD40
HTH_3
WD domain, G-beta repeat
Anaphase-promoting complex subunit 4 WD40 domain
WD40-like Beta Propeller Repeat
Helix-turn-helix
1.30E-14
3.80E-09
8.30E-08
3.20E-04
WP_016640794.1 67814 63584 - 1409PF00704
PF06483
PF14200
PF00652
Glyco_hydro_18
ChiC
RicinB_lectin_2
Ricin_B_lectin
Glycosyl hydrolases family 18
Chitinase C
Ricin-type beta-trefoil lectin domain-like
Ricin-type beta-trefoil lectin domain
2.50E-86
1.40E-56
5.80E-15
3.70E-11
WP_063890352.1 70248 68151 - 698PF00931
PF13191
PF13424
NB-ARC
AAA_16
TPR_12
NB-ARC domain
AAA ATPase domain
Tetratricopeptide repeat
2.00E-06
3.10E-06
1.20E-05

Results for WP_016627757.1 [Enterococcus faecium SD3B-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
D357_RS14365 0 377 + 125INFERRED GENE---
WP_258305345.1 882 750 - 43NO PFAM MATCH---
WP_016627757.1 1291 3040 + 582PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-51
WP_016627758.1 3059 4238 + 392PF07690
PF06779
MFS_1
MFS_4
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
1.30E-17
1.10E-04
WP_016627759.1 4239 4497 + 85PF09860DUF2087Uncharacterized protein conserved in bacteria (DUF2087)3.00E-24
WP_016627760.1 4506 6978 + 823PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus9.90E-07
WP_016627761.1 6964 7984 + 339NO PFAM MATCH---
WP_016627763.1 8465 8834 + 122NO PFAM MATCH---
WP_230198347.1 8851 9070 + 72NO PFAM MATCH---

Results for WP_020759490.1 [Gardnerella vaginalis JCP7672] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020759484.1 58265 59081 + 271PF00005
PF02463
PF13476
PF13304
PF13555
ABC_tran
SMC_N
AAA_23
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
4.60E-27
1.10E-06
1.60E-06
6.60E-06
1.80E-04
WP_020759486.1 61053 59268 - 594PF00005
PF00664
PF03193
PF02463
PF01926
ABC_tran
ABC_membrane
RsgA_GTPase
SMC_N
MMR_HSR1
ABC transporter
ABC transporter transmembrane region
RsgA GTPase
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
1.60E-31
1.60E-31
6.40E-06
1.40E-04
8.90E-04
WP_032840934.1 62134 61324 - 269PF01048PNP_UDP_1Phosphorylase superfamily2.40E-25
WP_020759488.1 62747 63680 + 310PF00291PALPPyridoxal-phosphate dependent enzyme1.30E-68
WP_004113243.1 63820 64678 + 285PF00132
PF06426
Hexapep
SATase_N
Bacterial transferase hexapeptide (six repeats)
Serine acetyltransferase, N-terminal
2.50E-09
2.20E-08
WP_004113245.1 65108 64685 - 140PF00583
PF13508
PF13673
PF13420
PF12568
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_4
PanZ
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain, PanZ
2.30E-13
2.40E-13
1.40E-12
1.00E-04
7.20E-04
WP_004114786.1 66465 65208 - 418PF00375SDFSodium:dicarboxylate symporter family7.70E-66
WP_020759489.1 67982 66674 - 435PF07690MFS_1Major Facilitator Superfamily4.50E-17
WP_020759490.1 69246 68004 - 413PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.60E-22
WP_032840936.1 70879 69925 - 317NO PFAM MATCH---
WP_020759493.1 71449 70888 - 186NO PFAM MATCH---
WP_032840938.1 73511 72047 - 487PF04326
PF13749
AlbA_2
HATPase_c_4
Putative DNA-binding domain
Putative ATP-dependent DNA helicase recG C-terminal
5.30E-18
3.00E-04
WP_020759495.1 74714 73808 - 301PF00929
PF00533
PF16473
PF01612
PF13482
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Exonuclease
BRCA1 C Terminus (BRCT) domain
3'-5' exoribonuclease Rv2179c-like domain
3'-5' exonuclease
RNase_H superfamily
1.60E-32
9.30E-10
2.90E-07
2.90E-05
1.20E-04
WP_004135203.1 75052 75946 + 298INFERRED GENE---
WP_004117904.1 76159 77263 + 367PF00923TAL_FSATransaldolase/Fructose-6-phosphate aldolase2.50E-81
WP_009994068.1 78072 77343 - 242PF13749HATPase_c_4Putative ATP-dependent DNA helicase recG C-terminal1.80E-09
WP_009994066.1 79157 78431 - 241PF07739
PF13411
PF00376
TipAS
MerR_1
MerR
TipAS antibiotic-recognition domain
MerR HTH family regulatory protein
MerR family regulatory protein
1.00E-28
1.00E-16
2.10E-14

Results for WP_020274909.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_020277215.1 [Streptomyces sp. HP-A2021] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_243380596.1 6226642 6225457 - 394PF01087
PF02744
GalP_UDP_transf
GalP_UDP_tr_C
Galactose-1-phosphate uridyl transferase, N-terminal domain
Galactose-1-phosphate uridyl transferase, C-terminal domain
3.50E-37
2.00E-10
WP_037673892.1 6227214 6226638 - 191PF13242
PF13419
PF08645
Hydrolase_like
HAD_2
PNK3P
HAD-hyrolase-like
Haloacid dehalogenase-like hydrolase
Polynucleotide kinase 3 phosphatase
1.00E-11
6.00E-07
1.30E-06
WP_020277218.1 6227783 6227210 - 190PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
6.30E-19
3.50E-09
WP_243380597.1 6229390 6227779 - 536PF08323
PF00534
PF13692
PF13579
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Starch synthase catalytic domain
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
1.40E-35
1.00E-13
1.20E-11
7.30E-04
WP_243380598.1 6229932 6229362 - 189NO PFAM MATCH---
WP_243380599.1 6230918 6229922 - 331PF14399BtrH_NButirosin biosynthesis protein H, N-terminal1.40E-06
WP_020269225.1 6232060 6230968 - 363PF00144Beta-lactamaseBeta-lactamase5.30E-42
WP_243380600.1 6233787 6232056 - 576PF00501
PF00550
PF13193
AMP-binding
PP-binding
AMP-binding_C
AMP-binding enzyme
Phosphopantetheine attachment site
AMP-binding enzyme C-terminal domain
1.50E-48
1.70E-17
5.20E-09
WP_020277215.1 6235070 6233783 - 428PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-53
WP_020273289.1 6235765 6235066 - 232NO PFAM MATCH---
WP_243380601.1 6237379 6235777 - 533PF00881NitroreductaseNitroreductase family3.50E-06
WP_243380602.1 6237960 6237375 - 194NO PFAM MATCH---
WP_243380603.1 6238788 6240027 + 412PF00202Aminotran_3Aminotransferase class-III1.20E-77
WP_243380604.1 6240032 6241103 + 356PF08240
PF00107
PF16912
ADH_N
ADH_zinc_N
Glu_dehyd_C
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
8.40E-29
6.70E-06
2.00E-05
WP_243380605.1 6241099 6242272 + 390PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
5.60E-13
1.90E-05
WP_243380606.1 6242312 6242882 + 189PF07081
PF17851
DUF1349
GH43_C2
Protein of unknown function (DUF1349)
Beta xylosidase C-terminal Concanavalin A-like domain
1.80E-62
1.10E-04
WP_243380608.1 6242874 6244275 + 466PF01554MatEMatE6.50E-37

Results for WP_020465110.1 [Sorangium cellulosum So0157-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020465103.1 525342 526176 + 277NO PFAM MATCH---
WP_148313239.1 527080 526240 - 279NO PFAM MATCH---
WP_148313240.1 527373 529263 + 629PF00158
PF14532
PF00498
PF02954
PF16697
Sigma54_activat
Sigma54_activ_2
FHA
HTH_8
Yop-YscD_cpl
Sigma-54 interaction domain
Sigma-54 interaction domain
FHA domain
Bacterial regulatory protein, Fis family
Inner membrane component of T3SS, cytoplasmic domain
2.20E-64
3.80E-22
4.30E-16
2.20E-11
2.20E-10
WP_044987379.1 529405 531361 + 651PF00069
PF07714
PF00072
PF00211
PF14531
Pkinase
PK_Tyr_Ser-Thr
Response_reg
Guanylate_cyc
Kinase-like
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Response regulator receiver domain
Adenylate and Guanylate cyclase catalytic domain
Kinase-like
1.40E-40
7.20E-28
1.80E-21
1.90E-16
2.40E-06
WP_236644396.1 531369 533091 + 573PF02518
PF00498
PF01590
PF13185
PF13492
HATPase_c
FHA
GAF
GAF_2
GAF_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
FHA domain
GAF domain
GAF domain
GAF domain
6.60E-20
5.70E-19
3.90E-17
5.40E-13
1.60E-10
WP_020465107.1 533333 535091 + 585PF00158
PF14532
PF01078
PF07728
PF13401
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA_22
Sigma-54 interaction domain
Sigma-54 interaction domain
Magnesium chelatase, subunit ChlI
AAA domain (dynein-related subfamily)
AAA domain
1.80E-49
1.80E-13
4.70E-06
1.70E-05
3.40E-04
WP_020465108.1 535142 539255 + 1370PF00069
PF13191
PF07714
PF00211
PF13424
Pkinase
AAA_16
PK_Tyr_Ser-Thr
Guanylate_cyc
TPR_12
Protein kinase domain
AAA ATPase domain
Protein tyrosine and serine/threonine kinase
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
6.20E-42
5.20E-22
7.10E-21
3.80E-14
1.20E-05
WP_148313241.1 539323 539701 + 125NO PFAM MATCH---
WP_020465110.1 539747 540971 + 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-80
WP_020465111.1 540967 542359 + 463PF07812TfuATfuA-like protein3.50E-49
WP_020465112.1 542496 544722 + 741PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-94
WP_020465114.1 545338 546976 + 545NO PFAM MATCH---
WP_020465115.1 547021 549886 + 954PF01055
PF16338
PF13802
PF17137
Glyco_hydro_31
AGL_N
Gal_mutarotas_2
DUF5110
Glycosyl hydrolases family 31
Alpha-glucosidase, N-terminal
Galactose mutarotase-like
Domain of unknown function (DUF5110)
4.90E-121
6.50E-13
1.50E-10
1.10E-04
WP_020465116.1 549985 550423 + 145NO PFAM MATCH---
WP_020465117.1 550774 551710 + 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.80E-33
6.50E-17
WP_236644397.1 551842 552907 + 354PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
1.40E-23
1.80E-12
1.20E-11
WP_020465119.1 553507 553090 - 138NO PFAM MATCH---

Results for WP_020465112.1 [Sorangium cellulosum So0157-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_148313240.1 527373 529263 + 629PF00158
PF14532
PF00498
PF02954
PF16697
Sigma54_activat
Sigma54_activ_2
FHA
HTH_8
Yop-YscD_cpl
Sigma-54 interaction domain
Sigma-54 interaction domain
FHA domain
Bacterial regulatory protein, Fis family
Inner membrane component of T3SS, cytoplasmic domain
2.20E-64
3.80E-22
4.30E-16
2.20E-11
2.20E-10
WP_044987379.1 529405 531361 + 651PF00069
PF07714
PF00072
PF00211
PF14531
Pkinase
PK_Tyr_Ser-Thr
Response_reg
Guanylate_cyc
Kinase-like
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Response regulator receiver domain
Adenylate and Guanylate cyclase catalytic domain
Kinase-like
1.40E-40
7.20E-28
1.80E-21
1.90E-16
2.40E-06
WP_236644396.1 531369 533091 + 573PF02518
PF00498
PF01590
PF13185
PF13492
HATPase_c
FHA
GAF
GAF_2
GAF_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
FHA domain
GAF domain
GAF domain
GAF domain
6.60E-20
5.70E-19
3.90E-17
5.40E-13
1.60E-10
WP_020465107.1 533333 535091 + 585PF00158
PF14532
PF01078
PF07728
PF13401
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA_22
Sigma-54 interaction domain
Sigma-54 interaction domain
Magnesium chelatase, subunit ChlI
AAA domain (dynein-related subfamily)
AAA domain
1.80E-49
1.80E-13
4.70E-06
1.70E-05
3.40E-04
WP_020465108.1 535142 539255 + 1370PF00069
PF13191
PF07714
PF00211
PF13424
Pkinase
AAA_16
PK_Tyr_Ser-Thr
Guanylate_cyc
TPR_12
Protein kinase domain
AAA ATPase domain
Protein tyrosine and serine/threonine kinase
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
6.20E-42
5.20E-22
7.10E-21
3.80E-14
1.20E-05
WP_148313241.1 539323 539701 + 125NO PFAM MATCH---
WP_020465110.1 539747 540971 + 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-80
WP_020465111.1 540967 542359 + 463PF07812TfuATfuA-like protein3.50E-49
WP_020465112.1 542496 544722 + 741PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-94
WP_020465114.1 545338 546976 + 545NO PFAM MATCH---
WP_020465115.1 547021 549886 + 954PF01055
PF16338
PF13802
PF17137
Glyco_hydro_31
AGL_N
Gal_mutarotas_2
DUF5110
Glycosyl hydrolases family 31
Alpha-glucosidase, N-terminal
Galactose mutarotase-like
Domain of unknown function (DUF5110)
4.90E-121
6.50E-13
1.50E-10
1.10E-04
WP_020465116.1 549985 550423 + 145NO PFAM MATCH---
WP_020465117.1 550774 551710 + 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.80E-33
6.50E-17
WP_236644397.1 551842 552907 + 354PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
1.40E-23
1.80E-12
1.20E-11
WP_020465119.1 553507 553090 - 138NO PFAM MATCH---
WP_020465120.1 554353 553507 - 281PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases3.20E-30
WP_020465121.1 555485 554345 - 379PF01890
PF11760
PF11761
CbiG_C
CbiG_N
CbiG_mid
Cobalamin synthesis G C-terminus
Cobalamin synthesis G N-terminal
Cobalamin biosynthesis central region
1.60E-36
6.80E-33
4.60E-10

Results for WP_020739043.1 [Sorangium cellulosum So0157-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_187345701.1 10131425 10131824 + 132PF00571CBSCBS domain1.80E-20
WP_020739038.1 10132005 10133400 + 464PF00158
PF00072
PF14532
PF02954
PF07728
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
2.60E-70
1.70E-33
2.30E-21
1.00E-11
5.10E-09
WP_044989151.1 10134630 10133508 - 373PF01063Aminotran_4Amino-transferase class IV1.00E-29
WP_044986448.1 10135541 10134887 - 217PF00753
PF12706
Lactamase_B
Lactamase_B_2
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.40E-26
4.50E-06
WP_063752059.1 10136946 10135665 - 426NO PFAM MATCH---
WP_049949735.1 10137802 10138894 + 363PF00069
PF07714
PF03109
PF01636
PF01163
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
RIO1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
ABC1 atypical kinase-like domain
Phosphotransferase enzyme family
RIO1 family
1.10E-40
1.10E-23
1.50E-10
2.10E-06
7.50E-04
WP_063752060.1 10140859 10138972 - 628PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
4.70E-28
4.60E-11
WP_080682459.1 10141539 10141722 + 60NO PFAM MATCH---
WP_020739043.1 10141960 10144108 + 715PF02624
PF00899
YcaO
ThiF
YcaO cyclodehydratase, ATP-ad Mg2+-binding
ThiF family
7.90E-64
3.40E-13
WP_020739044.1 10144119 10144902 + 260PF00881NitroreductaseNitroreductase family2.60E-28
WP_020739045.1 10144924 10145977 + 350PF00899ThiFThiF family3.30E-10
WP_020739046.1 10146052 10147588 + 511PF00069
PF07714
PF01636
PF03109
Pkinase
PK_Tyr_Ser-Thr
APH
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Phosphotransferase enzyme family
ABC1 atypical kinase-like domain
6.20E-40
1.90E-23
1.10E-07
8.30E-06
WP_044986449.1 10147565 10148615 + 349PF07719
PF13432
PF13424
TPR_2
TPR_16
TPR_12
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.20E-05
1.80E-04
2.20E-04
WP_020739048.1 10150232 10148765 - 488PF00691
PF13557
OmpA
Phenol_MetA_deg
OmpA family
Putative MetA-pathway of phenol degradation
2.80E-26
1.50E-08
WP_148314163.1 10151461 10150243 - 405NO PFAM MATCH---
WP_044986451.1 10151818 10154320 + 833PF01433
PF17900
Peptidase_M1
Peptidase_M1_N
Peptidase family M1 domain
Peptidase M1 N-terminal domain
1.20E-26
5.60E-09
WP_020739050.1 10154417 10155032 + 204NO PFAM MATCH---

Results for WP_020737928.1 [Sorangium cellulosum So0157-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020737920.1 8544853 8545867 + 337PF02518
PF00512
PF13589
PF00672
HATPase_c
HisKA
HATPase_c_3
HAMP
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HAMP domain
3.20E-24
8.30E-14
1.00E-04
4.20E-04
WP_236644024.1 8546325 8551842 + 1838PF13948DUF4215Domain of unknown function (DUF4215)6.70E-101
WP_020737922.1 8552074 8552875 + 266NO PFAM MATCH---
WP_020737923.1 8554138 8552941 - 398PF09084
PF16868
NMT1
NMT1_3
NMT1/THI5 like
NMT1-like family
5.10E-10
9.70E-04
WP_020737924.1 8554856 8559002 + 1381PF00069
PF07714
PF13191
PF00211
PF13401
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Guanylate_cyc
AAA_22
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
1.10E-47
1.90E-28
1.30E-23
1.80E-12
3.00E-07
WP_020737925.1 8559047 8559479 + 143NO PFAM MATCH---
WP_187345668.1 8559689 8560319 + 209PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)1.00E-22
WP_020737927.1 8560308 8561160 + 283PF13847
PF13649
PF08241
PF08242
PF13489
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.00E-26
1.30E-25
1.30E-24
9.30E-17
4.00E-16
WP_020737928.1 8561152 8563372 + 739PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-73
WP_020737929.1 8563389 8565267 + 625PF02518
PF13185
PF01590
PF00512
PF16697
HATPase_c
GAF_2
GAF
HisKA
Yop-YscD_cpl
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAF domain
GAF domain
His Kinase A (phospho-acceptor) domain
Inner membrane component of T3SS, cytoplasmic domain
3.40E-18
8.40E-12
1.10E-10
3.90E-09
4.80E-08
WP_020737930.1 8565322 8566111 + 262PF01636
PF01633
APH
Choline_kinase
Phosphotransferase enzyme family
Choline/ethanolamine kinase
5.50E-20
1.60E-05
WP_020737931.1 8566176 8567523 + 448PF00072
PF00211
Response_reg
Guanylate_cyc
Response regulator receiver domain
Adenylate and Guanylate cyclase catalytic domain
2.50E-27
6.60E-26
WP_044986275.1 8567671 8568802 + 376PF00072
PF02518
PF00512
Response_reg
HATPase_c
HisKA
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
5.60E-30
2.50E-20
1.20E-11
WP_020737933.1 8568791 8571173 + 793PF00989
PF13426
PF08448
PF13188
PF02518
PAS
PAS_9
PAS_4
PAS_8
HATPase_c
PAS fold
PAS domain
PAS fold
PAS domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
2.20E-36
3.50E-34
4.90E-32
5.40E-24
6.90E-23
WP_020737934.1 8572071 8571186 - 294PF00561
PF12697
PF06441
PF12146
Abhydrolase_1
Abhydrolase_6
EHN
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Epoxide hydrolase N terminus
Serine aminopeptidase, S33
2.80E-19
3.70E-16
7.30E-05
2.50E-04
WP_044988919.1 8573530 8572192 - 445PF03600CitMHSCitrate transporter1.10E-19
WP_020737936.1 8574252 8573526 - 241NO PFAM MATCH---

Results for WP_020438795.1 [Serratia plymuthica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004942650.1 5294995 5293321 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.50E-98
1.20E-11
5.00E-07
WP_006324556.1 5295866 5295176 - 229PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-82
6.30E-08
1.10E-05
9.40E-05
WP_020438797.1 5297428 5296141 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.70E-150
WP_004942642.1 5298628 5297542 - 361PF00266Aminotran_5Aminotransferase class-V3.20E-64
NP_462022.1 5299066 5299237 + 57INFERRED GENE---
WP_037430556.1 5299468 5300047 + 192NO PFAM MATCH---
WP_006324550.1 5300048 5300330 + 93NO PFAM MATCH---
WP_004942633.1 5301624 5300577 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.60E-63
2.40E-26
WP_020438795.1 5301772 5303536 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.00E-82
1.80E-64
WP_020438794.1 5304028 5304889 + 286PF01226Form_Nir_transFormate/nitrite transporter2.20E-74
WP_020438793.1 5304943 5307226 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.70E-206
5.70E-43
WP_004942624.1 5307530 5308271 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-29
1.00E-18
1.10E-05
WP_013812288.1 5309466 5308320 - 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.00E-30
4.80E-13
4.30E-08
7.90E-08
WP_006324544.1 5309643 5310012 + 122PF08818
PF18899
DUF1801
DUF5655
Domain of unknown function (DU1801)
Domain of unknown function (DUF5655)
2.00E-12
8.60E-04
WP_006324543.1 5310051 5310843 + 263PF12833
PF02311
PF00165
HTH_18
AraC_binding
HTH_AraC
Helix-turn-helix domain
AraC-like ligand binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.30E-22
5.50E-21
2.00E-17
WP_006324542.1 5310941 5311553 + 203PF01810LysELysE type translocator6.80E-35
WP_004942617.1 5312906 5311613 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.90E-35
7.90E-29

Results for WP_020843786.1 [Salmonella bongori serovar 40:z35:-] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_213892229.1 2811334 2809069 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.30E-50
9.70E-15
5.30E-05
WP_000167332.1 2811846 2811561 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140319.1 2813675 2812001 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000125010.1 2814472 2813788 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.50E-85
2.20E-07
2.10E-04
8.60E-04
9.60E-04
WP_213892230.1 2815406 2814644 - 253PF01435Peptidase_M48Peptidase family M483.80E-26
WP_079794481.1 2816833 2815549 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-151
WP_079773361.1 2817992 2816903 - 362PF00266Aminotran_5Aminotransferase class-V1.10E-70
WP_000642861.1 2818870 2818177 - 230PF04239DUF421Protein of unknown function (DUF421)9.60E-16
WP_020843786.1 2819005 2820766 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-81
1.30E-64
WP_079794482.1 2821170 2822028 + 285PF01226Form_Nir_transFormate/nitrite transporter8.40E-76
WP_001292826.1 2822084 2824367 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.40E-209
4.90E-44
WP_213892232.1 2824558 2825299 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-30
1.20E-18
3.10E-06
WP_239699273.1 2828488 2825485 - 1000PF11924
PF02369
PF09134
PF10670
PF13620
IAT_beta
Big_1
Invasin_D3
DUF4198
CarboxypepD_reg
Inverse autotransporter, beta-domain
Bacterial Ig-like domain (group 1)
Invasin, domain 3
Domain of unknown function (DUF4198)
Carboxypeptidase regulatory-like domain
2.30E-96
1.10E-80
5.50E-31
6.10E-13
6.60E-11
WP_213892236.1 2830870 2829448 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.20E-27
1.50E-10
WP_000109261.1 2832236 2831087 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
2.70E-27
2.20E-08
2.20E-07
WP_000526460.1 2833449 2832585 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.20E-117
WP_000213081.1 2834068 2833450 - 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.80E-28
6.00E-13
8.50E-13
1.30E-12
2.90E-11

Results for WP_020848179.1 [Aliarcobacter butzleri 7h1h] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020848171.1 1445522 1443182 - 779PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
3.40E-46
2.00E-15
1.30E-07
WP_020848172.1 1446640 1445791 - 282PF01263Aldose_epimAldose 1-epimerase1.30E-27
WP_020848173.1 1447398 1446636 - 253PF00905TranspeptidasePenicillin binding protein transpeptidase domain3.60E-34
WP_020848174.1 1448756 1447448 - 435PF00270
PF00271
PF04851
PF13401
DEAD
Helicase_C
ResIII
AAA_22
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
AAA domain
8.40E-53
7.50E-30
3.00E-07
1.60E-04
WP_020848175.1 1449018 1450962 + 647PF13304
PF13175
PF00005
PF02463
PF13476
AAA_21
AAA_15
ABC_tran
SMC_N
AAA_23
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
3.10E-10
1.70E-08
1.00E-05
4.80E-05
1.70E-04
WP_020848176.1 1450954 1451950 + 331NO PFAM MATCH---
WP_020848177.1 1453184 1451960 - 407PF07804
PF13657
HipA_C
Couple_hipA
HipA-like C-terminal domain
HipA N-terminal domain
1.90E-42
1.90E-15
WP_020848178.1 1453489 1453180 - 102PF01381
PF00157
HTH_3
Pou
Helix-turn-helix
Pou domain - N-terminal to homeobox domain
1.40E-08
7.10E-06
WP_020848179.1 1453638 1455264 + 541PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-61
2.50E-05
WP_014468979.1 1455298 1455676 + 125PF03625DUF302Domain of unknown function DUF3023.60E-16
WP_020848180.1 1455678 1456152 + 157PF11026DUF2721Protein of unknown function (DUF2721)1.00E-31
WP_041644589.1 1458415 1456177 - 745PF08376
PF00015
NIT
MCPsignal
Nitrate and nitrite sensing
Methyl-accepting chemotaxis protein (MCP) signalling domain
3.90E-49
2.00E-37
WP_020848182.1 1458572 1459379 + 268PF00075
PF13456
RNase_H
RVT_3
RNase H
Reverse transcriptase-like
3.90E-36
1.90E-07
WP_004509720.1 1459430 1460399 + 322PF00682HMGL-likeHMGL-like5.80E-25
WP_014468983.1 1460729 1460426 - 100PF08803ydhRPutative mono-oxygenase ydhR2.10E-41
WP_192813825.1 1461377 1460741 - 211NO PFAM MATCH---
WP_020848184.1 1462038 1461627 - 136PF04224
PF07681
DUF417
DoxX
Protein of unknown function, DUF417
DoxX
8.30E-08
8.40E-06

Results for WP_020916109.1 [Streptococcus agalactiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020916100.1 52688 51533 - 384PF00589
PF14659
PF14657
Phage_integrase
Phage_int_SAM_3
Arm-DNA-bind_4
Phage integrase family
Phage integrase, N-terminal SAM-like domain
Arm DNA-binding domain
7.70E-27
7.80E-16
1.70E-09
WP_020916101.1 53261 52742 - 172PF01381HTH_3Helix-turn-helix1.70E-07
WP_020916102.1 53409 53694 + 94PF07471Phage_Nu1Phage DNA packaging protein Nu19.10E-04
WP_020916103.1 53702 54527 + 274PF07261DnaB_2Replication initiation and membrane attachment1.00E-08
WP_020916104.1 54541 54832 + 96PF19387DUF5962Family of unknown function (DUF5962)2.10E-47
WP_020916105.1 54824 55187 + 120NO PFAM MATCH---
WP_020916106.1 55186 55543 + 118NO PFAM MATCH---
WP_020916108.1 56272 57145 + 290NO PFAM MATCH---
WP_020916109.1 57134 58349 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-38
WP_020916110.1 58361 59171 + 269PF00881NitroreductaseNitroreductase family2.20E-13
WP_020916111.1 59172 60120 + 315NO PFAM MATCH---
WP_020916112.1 60121 60991 + 289PF00005
PF13304
PF19263
ABC_tran
AAA_21
DUF5906
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Family of unknown function (DUF5906)
9.90E-27
6.20E-07
2.20E-05
WP_050197291.1 60974 61718 + 247PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.30E-15
1.50E-11
WP_020916113.1 61727 62243 + 171PF04397LytTRLytTr DNA-binding domain2.70E-16
WP_000477654.1 63313 64174 + 286NO PFAM MATCH---
WP_001024508.1 64246 65428 + 393PF07690
PF05977
PF12832
MFS_1
MFS_3
MFS_1_like
Major Facilitator Superfamily
Transmembrane secretion effector
MFS_1 like family
2.60E-26
8.70E-14
7.50E-05
WP_000812157.1 66140 65489 - 216PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component6.10E-29

Results for WP_020923243.1 [Rhizobium etli bv. mimosae str. Mim1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020923239.1 480471 480054 - 138NO PFAM MATCH---
WP_020923241.1 482725 481447 - 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
3.70E-60
2.80E-05
8.20E-05
WP_011428284.1 483538 482803 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
6.90E-57
1.70E-43
8.40E-07
2.80E-04
WP_011428285.1 483831 484617 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
4.80E-13
2.90E-11
3.30E-08
1.80E-06
5.80E-05
WP_020923242.1 484706 485543 + 278PF04909Amidohydro_2Amidohydrolase1.70E-40
WP_011428287.1 485805 486210 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
3.30E-12
3.40E-07
3.00E-06
WP_004668299.1 486518 486251 - 88NO PFAM MATCH---
WP_011428289.1 487326 486582 - 247PF07812TfuATfuA-like protein1.10E-37
WP_020923243.1 488585 487322 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-65
WP_020923244.1 488742 488598 - 47NO PFAM MATCH---
WP_041679087.1 490801 488845 - 651PF03704
PF14559
PF07719
PF13432
PF00515
BTAD
TPR_19
TPR_2
TPR_16
TPR_1
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.90E-14
3.30E-13
1.90E-09
8.00E-09
1.50E-08
WP_020923245.1 491939 491072 - 288PF01729
PF02749
PF13533
QRPTase_C
QRPTase_N
Biotin_lipoyl_2
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
Biotin-lipoyl like
4.50E-59
3.90E-27
7.40E-04
WP_011428293.1 493482 491940 - 513PF00890
PF01266
PF02910
PF07992
FAD_binding_2
DAO
Succ_DH_flav_C
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
Pyridine nucleotide-disulphide oxidoreductase
5.10E-80
2.20E-06
1.70E-04
2.10E-04
WP_011428294.1 494450 493478 - 323PF02445NadAQuinolinate synthetase A protein7.20E-113
WP_196232122.1 495458 494519 - 312PF19368AraR_CAraR C-terminal winged HTH domain2.30E-07
WP_196232123.1 496353 495537 - 271PF02548Pantoate_transfKetopantoate hydroxymethyltransferase2.00E-42
WP_020923248.1 497605 496378 - 408PF07992
PF14759
PF00070
PF01266
PF01262
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
AlaDh_PNT_C
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Alanine dehydrogenase/PNT, C-terminal domain
8.40E-66
5.00E-21
1.10E-18
4.00E-04
6.70E-04

Results for WP_020939952.1 [Streptomyces collinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020939959.1 4974450 4974891 + 146PF13577
PF12680
SnoaL_4
SnoaL_2
SnoaL-like domain
SnoaL-like domain
1.00E-20
1.30E-04
WP_020939958.1 4975340 4975076 - 87PF00550PP-bindingPhosphopantetheine attachment site2.80E-10
WP_020939957.1 4976593 4975366 - 408PF00109
PF02801
ketoacyl-synt
Ketoacyl-synt_C
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
1.50E-43
5.90E-19
WP_020939956.1 4977879 4976589 - 429PF00109
PF02801
PF00108
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Thiolase, N-terminal domain
1.10E-54
3.70E-32
4.00E-04
WP_078614697.1 4978749 4977939 - 269PF00975
PF12697
PF00561
Thioesterase
Abhydrolase_6
Abhydrolase_1
Thioesterase domain
Alpha/beta hydrolase family
alpha/beta hydrolase fold
1.60E-32
6.80E-07
8.80E-05
WP_020939954.1 4979516 4978745 - 256PF04199CyclasePutative cyclase1.50E-31
WP_020939953.1 4980479 4979660 - 272PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
4.40E-47
2.70E-08
WP_158506752.1 4980779 4980923 + 47NO PFAM MATCH---
WP_020939952.1 4980922 4983205 + 760PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-103
WP_020939951.1 4983248 4983926 + 225NO PFAM MATCH---
WP_020939950.1 4983977 4986347 + 789PF07730HisKA_3Histidine kinase1.50E-31
WP_043475513.1 4986996 4986381 - 204PF00072
PF00196
PF08281
PF04545
PF13384
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
Homeodomain-like domain
1.00E-19
4.50E-16
3.50E-05
4.30E-04
7.90E-04
WP_020939948.1 4987249 4987543 + 97PF19534DUF6059Family of unknown function (DUF6059)1.80E-16
WP_020939947.1 4987648 4989361 + 570PF00501AMP-bindingAMP-binding enzyme2.10E-78
WP_020939946.1 4989357 4991079 + 573PF02770
PF00441
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
2.90E-06
5.30E-05
WP_043475510.1 4991075 4991903 + 275PF01648ACPS4'-phosphopantetheinyl transferase superfamily2.00E-15
WP_043475509.1 4991958 4992204 + 81NO PFAM MATCH---

Results for WP_020952424.1 [Paracoccus aminophilus JCM 7686] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041528242.1 278251 278959 + 235PF12840
PF00581
PF01022
PF12802
PF09339
HTH_20
Rhodanese
HTH_5
MarR_2
HTH_IclR
Helix-turn-helix domain
Rhodanese-like domain
Bacterial regulatory protein, arsR family
MarR family
IclR helix-turn-helix domain
2.70E-14
1.20E-13
4.70E-11
1.70E-05
7.40E-05
WP_020952418.1 279052 279424 + 123PF13788DUF4180Domain of unknown function (DUF4180)2.30E-36
WP_020952419.1 279940 280129 + 62NO PFAM MATCH---
WP_158442383.1 280362 280641 + 92PF02597ThiSThiS family1.40E-08
WP_020952420.1 280642 281767 + 374PF00899
PF00581
PF13241
ThiF
Rhodanese
NAD_binding_7
ThiF family
Rhodanese-like domain
Putative NAD(P)-binding
1.20E-57
2.70E-11
3.90E-04
WP_020952421.1 282028 283048 + 339PF00005
PF13304
PF02463
PF13732
ABC_tran
AAA_21
SMC_N
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Domain of unknown function (DUF4162)
1.30E-33
3.70E-14
1.40E-06
3.80E-04
WP_020952422.1 283047 284145 + 365PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.20E-36
4.20E-17
3.70E-10
WP_020952423.1 284186 285122 + 311PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.70E-38
WP_020952424.1 285118 286462 + 447PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-59
WP_020952425.1 286458 287124 + 221NO PFAM MATCH---
WP_020952426.1 287120 289463 + 780PF00881NitroreductaseNitroreductase family2.10E-15
WP_020952427.1 289455 290514 + 352PF02163
PF05402
Peptidase_M50
PqqD
Peptidase family M50
Coenzyme PQQ synthesis protein D (PqqD)
7.40E-08
2.70E-04
WP_041528158.1 290503 293044 + 846NO PFAM MATCH---
WP_020952429.1 293164 293854 + 229PF00005
PF03193
ABC_tran
RsgA_GTPase
ABC transporter
RsgA GTPase
9.40E-34
5.40E-04
WP_020952430.1 293864 295031 + 388PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.80E-08
1.60E-06
WP_020952431.1 295027 296218 + 396PF12704
PF02687
MacB_PCD
FtsX
MacB-like periplasmic core domain
FtsX-like permease family
7.20E-16
5.20E-08
WP_020952432.1 296230 297469 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-76

Results for WP_020952432.1 [Paracoccus aminophilus JCM 7686] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020952424.1 285118 286462 + 447PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-59
WP_020952425.1 286458 287124 + 221NO PFAM MATCH---
WP_020952426.1 287120 289463 + 780PF00881NitroreductaseNitroreductase family2.10E-15
WP_020952427.1 289455 290514 + 352PF02163
PF05402
Peptidase_M50
PqqD
Peptidase family M50
Coenzyme PQQ synthesis protein D (PqqD)
7.40E-08
2.70E-04
WP_041528158.1 290503 293044 + 846NO PFAM MATCH---
WP_020952429.1 293164 293854 + 229PF00005
PF03193
ABC_tran
RsgA_GTPase
ABC transporter
RsgA GTPase
9.40E-34
5.40E-04
WP_020952430.1 293864 295031 + 388PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.80E-08
1.60E-06
WP_020952431.1 295027 296218 + 396PF12704
PF02687
MacB_PCD
FtsX
MacB-like periplasmic core domain
FtsX-like permease family
7.20E-16
5.20E-08
WP_020952432.1 296230 297469 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-76
WP_020952433.1 297465 298818 + 450PF07812TfuATfuA-like protein9.00E-46
WP_158442384.1 298912 300055 + 380PF16576
PF13437
PF13533
PF00364
PF01551
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
Peptidase family M23
1.40E-26
1.40E-22
7.10E-12
9.60E-07
1.50E-04
WP_020952435.1 300077 300995 + 305PF12697
PF00561
PF00756
PF12146
PF01764
Abhydrolase_6
Abhydrolase_1
Esterase
Hydrolase_4
Lipase_3
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Putative esterase
Serine aminopeptidase, S33
Lipase (class 3)
3.30E-14
2.70E-07
5.10E-07
1.10E-04
6.30E-04
WP_020952436.1 302623 301666 - 318PF00111Fer22Fe-2S iron-sulfur cluster binding domain3.00E-09
WP_020952437.1 303733 302632 - 366PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
1.60E-20
2.80E-18
WP_020952438.1 303842 304745 + 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-34
5.80E-16
WP_020952439.1 304895 307184 + 762PF01276
PF03711
PF03709
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Orn/Lys/Arg decarboxylase, major domain
Orn/Lys/Arg decarboxylase, C-terminal domain
Orn/Lys/Arg decarboxylase, N-terminal domain
1.90E-144
2.30E-45
2.30E-36
WP_020952440.1 308026 307258 - 255PF00149MetallophosCalcineurin-like phosphoesterase6.20E-14

Results for WP_009204996.1 [Sulfuricella denitrificans skB26] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009204988.1 2019539 2020190 + 216PF04205FMN_bindFMN-binding domain1.60E-16
WP_009204989.1 2020186 2020888 + 233PF02508Rnf-NqrRnf-Nqr subunit, membrane protein1.60E-60
WP_009204990.1 2021176 2024032 + 951PF14559
PF13432
PF13428
PF07719
PF12895
TPR_19
TPR_16
TPR_14
TPR_2
ANAPC3
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Anaphase-promoting complex, cyclosome, subunit 3
1.30E-60
2.70E-39
4.90E-39
6.10E-39
1.60E-28
WP_009204991.1 2024573 2025071 + 165PF07589PEP-CTERMPEP-CTERM motif2.90E-07
WP_009204992.1 2025393 2026032 + 212PF00730
PF00633
HhH-GPD
HHH
HhH-GPD superfamily base excision DNA repair protein
Helix-hairpin-helix motif
4.40E-21
1.20E-09
WP_009204993.1 2026028 2027129 + 366PF10442
PF08495
FIST_C
FIST
FIST C domain
FIST N domain
1.40E-18
1.00E-10
WP_009204994.1 2027121 2027544 + 140PF08897DUF1841Domain of unknown function (DUF1841)2.90E-61
WP_009204995.1 2027642 2028218 + 191PF11845DUF3365Protein of unknown function (DUF3365)6.90E-26
WP_009204996.1 2028290 2030006 + 571PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-80
1.10E-40
WP_009204997.1 2030791 2030080 - 236PF16100
PF13742
PF01336
RMI2
tRNA_anti_2
tRNA_anti-codon
RecQ-mediated genome instability protein 2
OB-fold nucleic acid binding domain
OB-fold nucleic acid binding domain
3.60E-05
4.50E-04
7.10E-04
WP_009204998.1 2032191 2030865 - 441PF00483
PF12804
PF00132
NTP_transferase
NTP_transf_3
Hexapep
Nucleotidyl transferase
MobA-like NTP transferase domain
Bacterial transferase hexapeptide (six repeats)
1.20E-64
7.70E-09
3.50E-04
WP_009204999.1 2033369 2032478 - 296PF00582UspUniversal stress protein family1.20E-53
WP_009205000.1 2034120 2033472 - 215PF00571CBSCBS domain1.80E-20
WP_013146757.1 2034383 2034595 + 70INFERRED GENE---
WP_009205002.1 2035193 2034788 - 134PF00581RhodaneseRhodanese-like domain5.70E-14
WP_198408598.1 2036190 2035218 - 323PF03741TerCIntegral membrane protein TerC family1.40E-53
WP_009205004.1 2036372 2037167 + 264PF05875CeramidaseCeramidase9.20E-07

Results for WP_020886951.1 [Desulfohalovibrio alkalitolerans DSM 16529] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020886943.1 56617 55519 - 365PF00072
PF13414
PF07719
PF14559
PF13431
Response_reg
TPR_11
TPR_2
TPR_19
TPR_17
Response regulator receiver domain
TPR repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.70E-13
2.60E-10
1.30E-09
9.80E-09
2.30E-06
WP_020886944.1 56761 57610 + 282PF01678DAP_epimeraseDiaminopimelate epimerase2.10E-44
WP_020886945.1 58257 57786 - 156PF030614HBTThioesterase superfamily9.60E-22
WP_020886946.1 58340 58667 + 108PF02627CMDCarboxymuconolactone decarboxylase family3.80E-14
WP_020886947.1 61549 58897 - 883PF00133
PF08264
PF09334
PF10458
PF13603
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA synthetases class I (I, L, M and V)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (M)
Valyl tRNA synthetase tRNA binding arm
Leucyl-tRNA synthetase, Domain 2
6.30E-202
5.60E-39
9.30E-25
7.60E-18
4.90E-12
WP_020886948.1 61700 62975 + 424PF09825BPL_NBiotin-protein ligase, N terminal8.50E-07
WP_020886949.1 63042 64410 + 455PF03313
PF03315
SDH_alpha
SDH_beta
Serine dehydratase alpha chain
Serine dehydratase beta chain
6.10E-71
5.50E-48
WP_020886950.1 65268 64512 - 251NO PFAM MATCH---
WP_020886951.1 67111 65422 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-39
WP_020886952.1 67322 68441 + 372PF01625
PF01641
PMSR
SelR
Peptide methionine sulfoxide reductase
SelR domain
2.90E-60
6.80E-50
WP_020886953.1 68715 70788 + 690PF17159
PF02518
PF00072
PF00512
MASE3
HATPase_c
Response_reg
HisKA
Membrane-associated sensor domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
7.00E-78
3.00E-31
1.50E-25
1.10E-19
WP_152490268.1 71539 70756 - 260PF11306DUF3108Protein of unknown function (DUF3108)1.70E-46
WP_020886955.1 71679 73197 + 505PF02602
PF00590
HEM4
TP_methylase
Uroporphyrinogen-III synthase HemD
Tetrapyrrole (Corrin/Porphyrin) Methylases
3.30E-64
2.40E-45
WP_020886956.1 73206 73884 + 225PF00551Formyl_trans_NFormyl transferase1.60E-52
WP_020886957.1 73938 74517 + 192PF01871AMMECR1AMMECR11.10E-49
WP_020886958.1 74922 74634 - 95PF04803
PF16808
PF11157
Cor1
PKcGMP_CC
DUF2937
Cor1/Xlr/Xmr conserved region
Coiled-coil N-terminus of cGMP-dependent protein kinase
Protein of unknown function (DUF2937)
1.90E-06
2.40E-05
7.60E-04
WP_020886959.1 75187 76543 + 451PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
6.60E-44
2.70E-05

Results for WP_020886475.1 [Desulfohalovibrio alkalitolerans DSM 16529] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020886467.1 38688 39327 + 212PF02511Thy1Thymidylate synthase complementing protein4.10E-46
WP_020886468.1 39975 41337 + 453PF00308
PF08299
PF11638
PF00004
PF01695
Bac_DnaA
Bac_DnaA_C
DnaA_N
AAA
IstB_IS21
Bacterial dnaA protein
Bacterial dnaA protein helix-turn-helix
DnaA N-terminal domain
ATPase family associated with various cellular activities (AAA)
IstB-like ATP binding protein
7.50E-60
4.00E-21
7.40E-13
5.80E-05
7.50E-04
WP_020886469.1 42236 41471 - 254NO PFAM MATCH---
WP_020886470.1 42975 42240 - 244NO PFAM MATCH---
WP_020886471.1 44105 42971 - 377PF13692
PF00534
PF13439
PF13579
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
7.90E-18
2.70E-16
5.20E-16
5.30E-09
WP_020886472.1 44577 44187 - 129PF02391MoaEMoaE protein2.60E-06
WP_020886473.1 44636 47444 + 935PF14559
PF07719
TPR_19
TPR_2
Tetratricopeptide repeat
Tetratricopeptide repeat
6.70E-05
1.70E-04
WP_020886474.1 47898 47580 - 105PF04358DsrCDsrC like protein1.00E-37
WP_020886475.1 50023 48301 - 573PF02624
PF00515
PF07719
PF13424
PF13181
YcaO
TPR_1
TPR_2
TPR_12
TPR_8
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
4.20E-59
6.00E-12
2.60E-09
2.00E-08
1.30E-07
WP_020886476.1 50771 50015 - 251PF10294
PF05175
PF08242
PF13489
PF03848
Methyltransf_16
MTS
Methyltransf_12
Methyltransf_23
TehB
Lysine methyltransferase
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
Tellurite resistance protein TehB
6.00E-10
1.10E-05
9.20E-05
1.60E-04
1.80E-04
WP_020886477.1 51458 51821 + 120PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger1.40E-13
WP_020886478.1 51845 53381 + 511PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
2.80E-12
3.20E-09
WP_020886479.1 53464 54457 + 330PF02562
PF13604
PF01695
PF13245
PF00270
PhoH
AAA_30
IstB_IS21
AAA_19
DEAD
PhoH-like protein
AAA domain
IstB-like ATP binding protein
AAA domain
DEAD/DEAH box helicase
1.10E-94
5.00E-08
5.30E-05
5.30E-05
8.70E-04
WP_020886480.1 54419 56750 + 776PF07697
PF01966
PF07698
7TMR-HDED
HD
7TM-7TMR_HD
7TM-HD extracellular
HD domain
7TM receptor with intracellular HD hydrolase
3.30E-36
1.30E-16
1.20E-13
WP_020886481.1 56746 57193 + 148PF02130YbeYEndoribonuclease YbeY8.20E-23
WP_020886482.1 57189 58359 + 389PF03486
PF00890
PF01266
PF13450
PF07992
HI0933_like
FAD_binding_2
DAO
NAD_binding_8
Pyr_redox_2
HI0933-like protein
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
2.70E-98
8.90E-11
3.50E-10
4.30E-06
1.50E-05
WP_020886483.1 58459 59359 + 299PF00185
PF02729
OTCace
OTCace_N
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
3.60E-52
3.80E-49

Results for WP_020877979.1 [Desulfococcus multivorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020877987.1 3226614 3224766 - 615PF01512
PF10589
PF00037
PF01257
PF10531
Complex1_51K
NADH_4Fe-4S
Fer4
2Fe-2S_thioredx
SLBB
Respiratory-chain NADH dehydrogenase 51 Kd subunit
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
4Fe-4S binding domain
Thioredoxin-like [2Fe-2S] ferredoxin
SLBB domain
1.90E-50
1.10E-37
1.40E-11
2.10E-09
1.10E-08
WP_020877986.1 3227011 3226657 - 117PF07085
PF07905
DRTGG
PucR
DRTGG domain
Purine catabolism regulatory protein-like family
1.00E-08
1.80E-04
WP_020877985.1 3227556 3227061 - 164PF012572Fe-2S_thioredxThioredoxin-like [2Fe-2S] ferredoxin9.00E-44
WP_236885996.1 3227756 3228626 + 289PF01048PNP_UDP_1Phosphorylase superfamily7.60E-49
WP_020877983.1 3228618 3229926 + 435PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
5.70E-69
3.30E-18
WP_040415956.1 3229970 3231458 + 495PF02518
PF00512
PF12729
PF07332
HATPase_c
HisKA
4HB_MCP_1
Phage_holin_3_6
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Four helix bundle sensory module for signal transduction
Putative Actinobacterial Holin-X, holin superfamily III
9.00E-21
2.90E-11
8.80E-07
3.40E-04
WP_020877981.1 3231547 3232975 + 475PF00158
PF00072
PF14532
PF02954
PF00004
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
Bacterial regulatory protein, Fis family
ATPase family associated with various cellular activities (AAA)
3.50E-72
3.40E-32
7.00E-22
2.70E-11
2.60E-07
WP_020877980.1 3233833 3233005 - 275PF06325
PF13649
PF13847
PF05175
PF01135
PrmA
Methyltransf_25
Methyltransf_31
MTS
PCMT
Ribosomal protein L11 methyltransferase (PrmA)
Methyltransferase domain
Methyltransferase domain
Methyltransferase small domain
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
2.10E-41
2.00E-07
7.10E-07
7.30E-06
2.00E-04
WP_020877979.1 3235603 3233872 - 576PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-46
WP_020877978.1 3236507 3235595 - 303PF00902TatCSec-independent protein translocase protein (TatC)3.60E-71
WP_010989436.1 3236733 3236862 + 43INFERRED GENE---
WP_144016581.1 3237296 3237047 - 82NO PFAM MATCH---
WP_020877976.1 3237282 3237819 + 178NO PFAM MATCH---
WP_020877975.1 3238095 3239832 + 578PF01314
PF02730
AFOR_C
AFOR_N
Aldehyde ferredoxin oxidoreductase, domains 2 & 3
Aldehyde ferredoxin oxidoreductase, N-terminal domain
3.10E-76
3.60E-55
WP_020877974.1 3240908 3240026 - 293PF00899ThiFThiF family2.10E-43
WP_020877973.1 3241138 3240904 - 77PF02597
PF14451
ThiS
Ub-Mut7C
ThiS family
Mut7-C ubiquitin
5.40E-09
2.40E-06
WP_020877972.1 3242521 3241147 - 457PF00158
PF00072
PF14532
PF02954
PF07728
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
2.10E-62
2.70E-25
1.10E-19
4.10E-14
3.50E-10

Results for WP_020879719.1 [Desulfovibrio sp. X2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020879711.1 24434 23831 - 200PF03448
PF12072
MgtE_N
RNase_Y_N
MgtE intracellular N domain
RNase Y N-terminal region
1.40E-05
2.80E-04
WP_020879712.1 24906 24462 - 147PF02050
PF16789
FliJ
YscO-like
Flagellar FliJ protein
YscO-like protein
3.90E-13
3.90E-07
WP_020879713.1 24981 27942 + 986PF08447
PF00989
PF02518
PF08448
PF00072
PAS_3
PAS
HATPase_c
PAS_4
Response_reg
PAS fold
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
Response regulator receiver domain
6.80E-41
3.90E-29
2.00E-28
4.00E-26
2.60E-25
WP_020879714.1 28710 27972 - 245PF02654CobSCobalamin-5-phosphate synthase4.20E-40
WP_020879715.1 29239 28711 - 175NO PFAM MATCH---
WP_020879716.1 30036 29238 - 265PF01887
PF20257
SAM_HAT_N
SAM_HAT_C
SAM hydroxide adenosyltransferase N-terminal domain
SAM hydroxide adenosyltransferase C-terminal domain
4.10E-53
4.40E-19
WP_020879717.1 30909 30045 - 287PF02588
PF10035
YitT_membrane
DUF2179
Uncharacterised 5xTM membrane BCR, YitT family COG1284
Uncharacterized protein conserved in bacteria (DUF2179)
6.70E-57
5.40E-18
WP_020879718.1 32709 31014 - 564PF03961
PF20250
FapA
FapA_N
Flagellar Assembly Protein A beta solenoid domain
Flagellar Assembly Protein A N-terminal region
2.50E-45
3.80E-25
WP_020879719.1 33087 34773 + 561PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-44
WP_020879720.1 34982 35729 + 248PF08241
PF13489
PF13649
PF08242
PF07021
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransf_12
MetW
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methionine biosynthesis protein MetW
5.90E-18
2.90E-14
3.30E-14
1.70E-08
3.90E-06
WP_020879721.1 35816 37271 + 484PF00890
PF07992
PF01946
PF01266
PF13450
FAD_binding_2
Pyr_redox_2
Thi4
DAO
NAD_binding_8
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Thi4 family
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
9.40E-29
7.40E-08
4.40E-06
4.80E-06
9.40E-04
WP_020879722.1 37287 37902 + 204PF13412HTH_24Winged helix-turn-helix DNA-binding1.50E-06
WP_020879723.1 37904 39002 + 365PF03102
PF08666
NeuB
SAF
NeuB family
SAF domain
7.00E-74
6.70E-12
WP_020879724.1 39020 39980 + 319NO PFAM MATCH---
WP_020879725.1 40148 41639 + 496PF02518
PF00989
PF00512
PF14501
HATPase_c
PAS
HisKA
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
His Kinase A (phospho-acceptor) domain
GHKL domain
6.40E-15
5.40E-06
6.50E-06
1.70E-04
WP_020879726.1 42848 41651 - 398PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
6.10E-21
3.00E-04
WP_020879727.1 44136 42840 - 431NO PFAM MATCH---

Results for WP_020875218.1 [Desulfococcus multivorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020875210.1 2692837 2691037 - 599PF08275
PF01807
PF13662
PF13155
PF10410
Toprim_N
zf-CHC2
Toprim_4
Toprim_2
DnaB_bind
DNA primase catalytic core, N-terminal domain
CHC2 zinc finger
Toprim domain
Toprim-like
DnaB-helicase binding domain of primase
4.70E-38
5.00E-36
2.10E-20
8.80E-20
2.70E-11
WP_020875211.1 2693776 2693053 - 240PF00977
PF01207
PF03060
PF02581
PF04481
His_biosynth
Dus
NMO
TMP-TENI
DUF561
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiamine monophosphate synthase
Protein of unknown function (DUF561)
3.10E-82
8.00E-12
2.90E-07
1.10E-05
5.70E-04
WP_144016494.1 2694456 2693772 - 227NO PFAM MATCH---
WP_040413909.1 2695103 2694515 - 195PF00475IGPDImidazoleglycerol-phosphate dehydratase1.40E-59
WP_020875214.1 2695674 2695962 + 95NO PFAM MATCH---
WP_020875215.1 2696039 2697761 + 573PF02254
PF02080
PF07885
PF13241
TrkA_N
TrkA_C
Ion_trans_2
NAD_binding_7
TrkA-N domain
TrkA-C domain
Ion channel
Putative NAD(P)-binding
2.40E-34
5.00E-20
3.80E-10
5.50E-06
WP_159449722.1 2698419 2700033 + 537PF00069
PF07714
PF14531
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Kinase-like
9.20E-42
5.70E-30
7.70E-04
WP_020875217.1 2700014 2700512 + 165NO PFAM MATCH---
WP_020875218.1 2701189 2702935 + 581PF02624
PF00515
PF07719
PF13181
PF13176
YcaO
TPR_1
TPR_2
TPR_8
TPR_7
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.20E-69
1.70E-29
2.20E-25
8.50E-22
9.40E-17
WP_020875219.1 2702961 2704179 + 405PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
3.00E-20
9.60E-12
WP_020875220.1 2704823 2704169 - 217PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.30E-16
WP_020875221.1 2706265 2704798 - 488PF13646
PF03130
HEAT_2
HEAT_PBS
HEAT repeats
PBS lyase HEAT-like repeat
2.60E-10
9.60E-04
WP_020875222.1 2707111 2706295 - 271NO PFAM MATCH---
WP_234979155.1 2707396 2707120 - 91PF01230
PF11969
HIT
DcpS_C
HIT domain
Scavenger mRNA decapping enzyme C-term binding
3.60E-20
8.90E-17
WP_020875224.1 2708187 2707449 - 245PF03588Leu_Phe_transLeucyl/phenylalanyl-tRNA protein transferase3.00E-73
WP_020875225.1 2710484 2708201 - 760PF07724
PF17871
PF00004
PF10431
PF07728
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
ATPase family associated with various cellular activities (AAA)
C-terminal, D2-small domain, of ClpB protein
AAA domain (dynein-related subfamily)
4.50E-50
1.60E-28
2.40E-26
5.30E-25
2.80E-17
WP_020875226.1 2710801 2710486 - 104PF02617ClpSATP-dependent Clp protease adaptor protein ClpS4.10E-35

Results for WP_020880550.1 [Desulfovibrio sp. X2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020880542.1 96311 96953 + 213PF02511Thy1Thymidylate synthase complementing protein7.10E-46
WP_020880543.1 97542 98967 + 474PF00308
PF08299
PF11638
PF01695
PF00004
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
Bacterial dnaA protein
Bacterial dnaA protein helix-turn-helix
DnaA N-terminal domain
IstB-like ATP binding protein
ATPase family associated with various cellular activities (AAA)
1.30E-57
5.60E-21
3.00E-13
4.30E-06
7.40E-05
WP_020880544.1 100129 99376 - 250NO PFAM MATCH---
WP_020880545.1 101288 100169 - 372NO PFAM MATCH---
WP_020880546.1 102463 101284 - 392PF13692
PF00534
PF13439
PF13579
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
2.20E-20
1.80E-18
2.90E-12
6.90E-05
WP_020880547.1 102877 102499 - 125PF02391MoaEMoaE protein3.90E-08
WP_020880548.1 102933 105666 + 910PF07719TPR_2Tetratricopeptide repeat4.70E-05
WP_020880549.1 106135 105817 - 105PF04358DsrCDsrC like protein8.80E-38
WP_020880550.1 108099 106374 - 574PF02624
PF00515
PF07719
PF13181
PF13424
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
4.70E-59
4.50E-10
3.40E-07
1.50E-06
2.00E-06
WP_020880551.1 108817 108085 - 243PF10294
PF13489
PF08242
PF05175
PF13649
Methyltransf_16
Methyltransf_23
Methyltransf_12
MTS
Methyltransf_25
Lysine methyltransferase
Methyltransferase domain
Methyltransferase domain
Methyltransferase small domain
Methyltransferase domain
2.70E-17
2.20E-07
2.30E-07
3.30E-07
4.00E-06
WP_035041290.1 109553 109916 + 120PF01258zf-dskA_traRProkaryotic dksA/traR C4-type zinc finger6.30E-14
WP_020880553.1 109943 111530 + 528PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
1.00E-13
4.00E-10
WP_020880554.1 111641 112619 + 325PF02562
PF13604
PF01695
PF13245
PF13401
PhoH
AAA_30
IstB_IS21
AAA_19
AAA_22
PhoH-like protein
AAA domain
IstB-like ATP binding protein
AAA domain
AAA domain
1.00E-94
5.70E-08
1.20E-05
1.30E-05
9.70E-04
WP_020880555.1 112578 114963 + 794PF07697
PF07698
PF01966
7TMR-HDED
7TM-7TMR_HD
HD
7TM-HD extracellular
7TM receptor with intracellular HD hydrolase
HD domain
9.50E-41
7.70E-16
6.00E-15
WP_152512877.1 114983 115496 + 170PF02130YbeYEndoribonuclease YbeY6.30E-23
WP_020880557.1 115506 116700 + 397PF03486
PF01266
PF00890
PF13450
PF07992
HI0933_like
DAO
FAD_binding_2
NAD_binding_8
Pyr_redox_2
HI0933-like protein
FAD dependent oxidoreductase
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
9.80E-96
6.10E-10
1.70E-08
2.20E-05
4.60E-05
WP_020880558.1 116855 117755 + 299PF00185
PF02729
OTCace
OTCace_N
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
3.40E-51
8.00E-50

Results for WP_021295900.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_004911164.1 [Acinetobacter junii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004911186.1 14476 13459 - 338PF00175
PF00970
PF00111
NAD_binding_1
FAD_binding_6
Fer2
Oxidoreductase NAD-binding domain
Oxidoreductase FAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
7.20E-25
2.40E-20
2.00E-16
WP_004642042.1 14546 15046 + 166INFERRED GENE---
WP_004911181.1 16434 15057 - 458PF00355
PF00848
Rieske
Ring_hydroxyl_A
Rieske [2Fe-2S] domain
Ring hydroxylating alpha subunit (catalytic domain)
6.80E-23
4.30E-19
WP_004911176.1 17437 16516 - 306PF00775
PF04444
PF13620
Dioxygenase_C
Dioxygenase_N
CarboxypepD_reg
Dioxygenase
Catechol dioxygenase N terminus
Carboxypeptidase regulatory-like domain
5.60E-59
6.80E-20
2.80E-04
WP_004911173.1 17871 17580 - 96PF02426MIaseMuconolactone delta-isomerase2.50E-41
WP_004911171.1 18999 17883 - 371PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
1.30E-42
1.40E-31
9.00E-04
WP_004911169.1 19110 20043 + 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-37
3.10E-24
WP_004911166.1 20241 21315 + 357PF04909Amidohydro_2Amidohydrolase4.20E-21
WP_004911164.1 21576 23772 + 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-74
4.00E-73
1.50E-08
WP_004911158.1 24226 24436 + 69PF20375DUF6670Family of unknown function (DUF6670)2.70E-11
WP_004911156.1 28030 24556 - 1157PF20169
PF01558
PF02775
DUF6537
POR
TPP_enzyme_C
Family of unknown function (DUF6537)
Pyruvate ferredoxin/flavodoxin oxidoreductase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
1.40E-49
2.30E-23
4.40E-06
WP_026057409.1 28230 29187 + 318PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.20E-33
3.40E-16
WP_004911148.1 30189 29286 - 300PF00682HMGL-likeHMGL-like5.00E-53
WP_004911146.1 32177 30185 - 663PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
1.40E-74
4.40E-45
9.40E-37
3.80E-15
4.10E-11
WP_004911143.1 32992 32188 - 267PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
6.10E-53
1.40E-34
WP_004911140.1 34603 33001 - 533PF01039Carboxyl_transCarboxyl transferase domain1.30E-154
WP_004911138.1 35800 34627 - 390PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
4.30E-39
8.00E-37
5.00E-27
2.20E-14

Results for WP_002629941.1 [Cystobacter fuscus DSM 2262] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002629949.1 126434 127649 + 404PF00291
PF01842
PF13291
PALP
ACT
ACT_4
Pyridoxal-phosphate dependent enzyme
ACT domain
ACT domain
6.00E-87
7.60E-09
1.70E-06
WP_002629948.1 127652 129215 + 520PF14264Glucos_trans_IIGlucosyl transferase GtrII2.30E-05
WP_002629947.1 129753 129249 - 167PF04752
PF06094
ChaC
GGACT
ChaC-like protein
Gamma-glutamyl cyclotransferase, AIG2-like
1.10E-60
3.20E-07
WP_002629946.1 129751 129889 + 45NO PFAM MATCH---
WP_020918395.1 130059 132156 + 698PF01244
PF04706
Peptidase_M19
Dickkopf_N
Membrane dipeptidase (Peptidase family M19)
Dickkopf N-terminal cysteine-rich region
1.00E-22
6.20E-05
WP_002629944.1 133902 132177 - 574PF00158
PF14532
PF07728
PF13191
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
Sigma-54 interaction domain
Sigma-54 interaction domain
AAA domain (dynein-related subfamily)
AAA ATPase domain
1.30E-47
1.20E-14
2.00E-07
4.60E-04
WP_002629943.1 133972 137347 + 1124PF00069
PF13191
PF07714
PF13401
Pkinase
AAA_16
PK_Tyr_Ser-Thr
AAA_22
Protein kinase domain
AAA ATPase domain
Protein tyrosine and serine/threonine kinase
AAA domain
4.50E-43
4.10E-25
1.10E-24
6.70E-05
WP_043432178.1 137407 138163 + 251NO PFAM MATCH---
WP_002629941.1 138159 139392 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-78
WP_002629940.1 139388 140729 + 446PF07812TfuATfuA-like protein8.00E-48
WP_051256624.1 140934 142620 + 561PF09792But2Ubiquitin 3 binding protein But2 C-terminal domain3.10E-05
WP_002629938.1 142830 144636 + 601PF13354
PF17660
Beta-lactamase2
BTRD1
Beta-lactamase enzyme family
Bacterial tandem repeat domain 1
3.00E-22
1.00E-07
WP_063725042.1 144871 146698 + 608PF13948
PF07691
DUF4215
PA14
Domain of unknown function (DUF4215)
PA14 domain
1.70E-45
5.80E-08
WP_002629936.1 146772 147225 + 150NO PFAM MATCH---
WP_002629935.1 147706 147280 - 141NO PFAM MATCH---
WP_002629934.1 147817 149965 + 715PF05649
PF01431
Peptidase_M13_N
Peptidase_M13
Peptidase family M13
Peptidase family M13
8.80E-98
1.50E-62
WP_002629933.1 150707 150062 - 214NO PFAM MATCH---

Results for WP_002623934.1 [Cystobacter fuscus DSM 2262] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043431331.1 43811 42257 - 517PF00069
PF07714
PF08308
PF01636
PF03109
Pkinase
PK_Tyr_Ser-Thr
PEGA
APH
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
PEGA domain
Phosphotransferase enzyme family
ABC1 atypical kinase-like domain
1.50E-35
1.70E-27
3.80E-11
6.90E-06
3.60E-04
WP_043431332.1 44669 43904 - 254PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
7.50E-34
1.80E-04
WP_002623928.1 45643 44665 - 325PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
2.60E-33
7.50E-12
3.50E-04
WP_002623929.1 45795 47475 + 559PF00005
PF13304
PF12848
PF13476
PF02463
ABC_tran
AAA_21
ABC_tran_Xtn
AAA_23
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
AAA domain
RecF/RecN/SMC N terminal domain
6.10E-51
4.90E-21
6.20E-14
1.10E-10
1.40E-08
WP_162159683.1 47553 48720 + 388PF13304
PF13175
PF02463
PF13476
AAA_21
AAA_15
SMC_N
AAA_23
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
AAA domain
8.40E-27
2.20E-22
2.90E-09
1.60E-08
WP_155893548.1 48880 49483 + 200NO PFAM MATCH---
WP_002623932.1 51069 49842 - 408PF04909Amidohydro_2Amidohydrolase5.60E-31
WP_002623933.1 51272 51494 + 73NO PFAM MATCH---
WP_002623934.1 51522 53772 + 749PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.60E-99
WP_051256500.1 53809 55255 + 481PF00881NitroreductaseNitroreductase family5.20E-11
WP_162159684.1 55328 59126 + 1265PF00069
PF07714
PF13191
PF01636
PF06293
Pkinase
PK_Tyr_Ser-Thr
AAA_16
APH
Kdo
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
3.30E-45
6.80E-28
3.20E-24
5.90E-07
1.00E-04
WP_002623937.1 59122 61900 + 925PF13575
PF05147
DUF4135
LANC_like
Domain of unknown function (DUF4135)
Lanthionine synthetase C-like protein
1.50E-83
5.40E-07
WP_002623938.1 63638 61901 - 578PF09286
PF00082
Pro-kuma_activ
Peptidase_S8
Pro-kumamolisin, activation domain
Subtilase family
5.60E-06
4.00E-04
WP_002623939.1 63896 66086 + 729NO PFAM MATCH---
WP_002623940.1 66082 67423 + 446NO PFAM MATCH---
WP_002623941.1 67522 68686 + 387PF02655ATP-grasp_3ATP-grasp domain2.90E-05
WP_002623942.1 69455 68705 - 249PF00756EsterasePutative esterase4.20E-34

Results for WP_002622758.1 [Cystobacter fuscus DSM 2262] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002622749.1 366000 365349 - 216PF02909
PF00440
TetR_C_1
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
2.20E-31
4.30E-14
WP_002622750.1 366087 367668 + 526PF01494
PF01266
PF13450
FAD_binding_3
DAO
NAD_binding_8
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
6.70E-83
1.70E-04
4.60E-04
WP_002622751.1 367779 369000 + 406NO PFAM MATCH---
WP_162159670.1 369629 369062 - 188PF00072Response_regResponse regulator receiver domain9.50E-10
WP_002622753.1 370090 369847 - 80NO PFAM MATCH---
WP_043431101.1 370416 371334 + 305NO PFAM MATCH---
WP_002622756.1 372596 371390 - 401PF00291PALPPyridoxal-phosphate dependent enzyme4.20E-65
WP_002622757.1 373442 372605 - 278PF01263Aldose_epimAldose 1-epimerase6.20E-22
WP_002622758.1 375024 373533 - 496PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.30E-58
WP_002622759.1 376062 375129 - 310PF13023HD_3HD domain1.30E-07
WP_155893498.1 376851 377451 + 199NO PFAM MATCH---
WP_245591781.1 377729 378503 + 257PF11876DUF3396Protein of unknown function (DUF3396)1.40E-48
WP_020918194.1 379671 378633 - 345PF00365PFKPhosphofructokinase2.00E-106
WP_043430952.1 379881 380625 + 247PF01182Glucosamine_isoGlucosamine-6-phosphate isomerases/6-phosphogluconolactonase9.50E-24
WP_002622764.1 381117 380625 - 163NO PFAM MATCH---
WP_002622765.1 382811 381191 - 539PF12034
PF12450
PF00092
PF13519
PF13768
DUF3520
vWF_A
VWA
VWA_2
VWA_3
Domain of unknown function (DUF3520)
von Willebrand factor
von Willebrand factor type A domain
von Willebrand factor type A domain
von Willebrand factor type A domain
9.40E-44
1.40E-28
8.80E-25
4.60E-18
1.80E-14
WP_081713793.1 383547 382869 - 225PF01464SLTTransglycosylase SLT domain1.80E-18

Results for WP_021262837.1 [Paenibacillus alvei TS-15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021262829.1 184591 186772 + 726PF03176MMPLMMPL family7.00E-104
WP_161627402.1 187187 188162 + 324PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
1.50E-15
2.30E-05
WP_021262831.1 188158 188809 + 216PF00072
PF00196
PF08281
PF13384
PF04967
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_10
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
HTH DNA binding domain
2.30E-31
1.50E-20
1.80E-06
3.70E-04
7.00E-04
WP_021262832.1 190238 189005 - 410PF00067p450Cytochrome P4508.90E-39
WP_021262833.1 191875 190336 - 512PF07690MFS_1Major Facilitator Superfamily5.40E-52
WP_021262834.1 192115 192706 + 196PF14278
PF00440
TetR_C_8
TetR_N
Transcriptional regulator C-terminal region
Bacterial regulatory proteins, tetR family
1.10E-16
8.20E-04
WP_152523887.1 193434 193224 - 69NO PFAM MATCH---
WP_194483589.1 193547 195491 + 647NO PFAM MATCH---
WP_021262837.1 195487 197437 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-85
WP_036621707.1 197480 199073 + 530PF00881NitroreductaseNitroreductase family1.90E-13
WP_152523888.1 199336 199558 + 73NO PFAM MATCH---
WP_021262840.1 202121 200207 - 637PF01510Amidase_2N-acetylmuramoyl-L-alanine amidase5.70E-26
WP_021262841.1 202434 203538 + 367PF05257
PF01966
CHAP
HD
CHAP domain
HD domain
1.90E-08
9.20E-04
WP_021262842.1 204000 204315 + 104PF00085
PF13905
PF13728
PF08534
PF13098
Thioredoxin
Thioredoxin_8
TraF
Redoxin
Thioredoxin_2
Thioredoxin
Thioredoxin-like
F plasmid transfer operon protein
Redoxin
Thioredoxin-like domain
2.00E-26
4.60E-09
8.40E-07
2.10E-06
4.00E-06
WP_021262843.1 204607 204802 + 64NO PFAM MATCH---
WP_021262844.1 204821 205256 + 144PF00005
PF13304
PF13175
PF13476
PF13555
ABC_tran
AAA_21
AAA_15
AAA_23
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
P-loop containing region of AAA domain
3.50E-17
2.30E-05
3.50E-04
4.00E-04
5.20E-04
WP_021262845.1 205483 205927 + 147PF01047
PF12802
PF13463
PF13412
PF13601
MarR
MarR_2
HTH_27
HTH_24
HTH_34
MarR family
MarR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
Winged helix DNA-binding domain
1.30E-10
1.30E-09
6.00E-08
4.00E-05
7.90E-05

Results for WP_021247719.1 [Thauera terpenica 58Eu] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031346078.1 277958 278672 + 237PF00005
PF13304
PF02463
PF13555
PF09818
ABC_tran
AAA_21
SMC_N
AAA_29
ABC_ATPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
ATPase of the ABC class
1.20E-31
2.50E-11
2.40E-04
8.10E-04
8.80E-04
WP_021247712.1 278732 279656 + 307PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
2.10E-25
8.70E-04
WP_052028652.1 279758 280733 + 324PF00753
PF12706
PF19583
Lactamase_B
Lactamase_B_2
ODP
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
ODP family beta lactamase
9.40E-23
4.40E-07
6.90E-05
WP_021247714.1 280853 281048 + 64NO PFAM MATCH---
WP_021247715.1 281101 284305 + 1067PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
2.00E-72
1.80E-35
WP_021247716.1 284670 284361 - 102PF05016ParE_toxinParE toxin of type II toxin-antitoxin system, parDE6.70E-12
WP_021247717.1 284939 284672 - 88NO PFAM MATCH---
WP_021247718.1 285651 285054 - 198PF07589
PF00059
PEP-CTERM
Lectin_C
PEP-CTERM motif
Lectin C-type domain
2.20E-07
1.70E-06
WP_021247719.1 286101 287847 + 581PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.00E-79
1.60E-39
WP_021247720.1 288258 287934 - 107PF01381
PF12844
PF13560
PF15731
HTH_3
HTH_19
HTH_31
MqsA_antitoxin
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Antitoxin component of bacterial toxin-antitoxin system, MqsA
2.20E-07
6.40E-06
5.20E-05
6.70E-04
WP_021247721.1 288625 288241 - 127PF06296RelERelE toxin of RelE / RelB toxin-antitoxin system6.30E-45
WP_021247722.1 289927 288688 - 412PF07669
PF02384
PF13489
Eco57I
N6_Mtase
Methyltransf_23
Eco57I restriction-modification methylase
N-6 DNA Methylase
Methyltransferase domain
4.90E-08
2.10E-07
1.80E-04
WP_021247723.1 290148 291126 + 325PF00291PALPPyridoxal-phosphate dependent enzyme3.30E-66
WP_021247724.1 291244 292039 + 264PF00656Peptidase_C14Caspase domain9.80E-37
WP_021247725.1 292956 292056 - 299PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
8.00E-30
3.60E-07
WP_031346080.1 293291 293048 - 80NO PFAM MATCH---
WP_021247727.1 295380 293352 - 675PF13604
PF13245
PF13538
PF05127
PF13086
AAA_30
AAA_19
UvrD_C_2
Helicase_RecD
AAA_11
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
Helicase
AAA domain
2.10E-31
6.20E-26
5.10E-13
9.50E-10
1.00E-09

Results for WP_021140857.1 [Aeromonas salmonicida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_265451729.1 204375 203538 - 278PF12833
PF00165
PF06445
PF14526
HTH_18
HTH_AraC
GyrI-like
Cass2
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
GyrI-like small molecule binding domain
Integron-associated effector binding protein
1.90E-20
6.00E-15
6.80E-14
9.90E-12
WP_042869918.1 204742 205483 + 246PF13561
PF00106
PF08659
PF01370
PF16363
adh_short_C2
adh_short
KR
Epimerase
GDP_Man_Dehyd
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
9.00E-57
1.80E-54
4.00E-18
1.10E-07
1.40E-04
WP_021138227.1 206485 205579 - 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
7.60E-41
4.00E-22
3.50E-04
WP_096119627.1 206586 207225 + 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
5.10E-27
1.70E-09
1.20E-07
3.50E-06
2.90E-04
WP_265451730.1 207610 208681 + 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.20E-33
5.70E-19
WP_265451731.1 208777 209941 + 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
1.10E-133
1.30E-05
7.60E-05
6.40E-04
WP_265451732.1 212861 210080 - 926PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
1.90E-38
1.50E-25
WP_265451733.1 214577 213461 - 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
7.70E-59
1.60E-22
WP_021140857.1 214941 216702 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.20E-79
5.70E-64
WP_005310913.1 217083 217932 + 282PF01226Form_Nir_transFormate/nitrite transporter1.40E-74
WP_197665900.1 217971 220260 + 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.00E-201
3.80E-43

Results for WP_021266013.1 [Bacteriovorax sp. BAL6_X] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021266160.1 762381 762969 + 195PF03692CxxCxxCCPutative zinc- or iron-chelating domain4.60E-07
WP_021266075.1 764440 762952 - 495PF14401
PF08443
PF07478
PF02655
RLAN
RimK
Dala_Dala_lig_C
ATP-grasp_3
RimK-like ATPgrasp N-terminal domain
RimK-like ATP-grasp domain
D-ala D-ala ligase C-terminus
ATP-grasp domain
1.00E-42
5.90E-12
1.60E-08
9.90E-05
WP_021266429.1 764521 765610 + 362PF11814
PF00583
PF13673
PF13508
PF08445
DUF3335
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
FR47
Peptidase_C39 like family
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
1.40E-77
9.10E-15
2.00E-11
3.10E-09
1.10E-06
WP_021266426.1 765628 766708 + 359NO PFAM MATCH---
WP_021266374.1 767041 766693 - 115PF01329Pterin_4aPterin 4 alpha carbinolamine dehydratase7.20E-21
WP_021265723.1 767361 767049 - 103NO PFAM MATCH---
WP_021266016.1 767523 769101 + 525PF08269
PF17200
PF00015
PF17201
dCache_2
sCache_2
MCPsignal
Cache_3-Cache_2
Cache domain
Single Cache domain 2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache 3/Cache 2 fusion domain
5.50E-37
1.60E-35
6.70E-29
7.30E-08
WP_021266132.1 769788 769248 - 179PF00255GSHPxGlutathione peroxidase2.20E-34
WP_021266013.1 772006 769831 - 724PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.50E-75
1.30E-64
8.10E-10
WP_021266502.1 772191 772647 + 151NO PFAM MATCH---
WP_021266186.1 772775 773369 + 197PF03922
PF13505
OmpW
OMP_b-brl
OmpW family
Outer membrane protein beta-barrel domain
1.20E-41
9.40E-09
WP_084710438.1 773463 774030 + 188PF00583
PF13527
PF13480
Acetyltransf_1
Acetyltransf_9
Acetyltransf_6
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
8.30E-06
5.50E-05
8.10E-04
WP_021265736.1 774974 774026 - 315NO PFAM MATCH---
WP_021265758.1 776177 775022 - 384PF01569PAP2PAP2 superfamily5.60E-18
WP_021265824.1 776357 776684 + 108NO PFAM MATCH---
WP_021265967.1 776784 777621 + 278PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
4.10E-17
4.00E-08
WP_156979707.1 777905 779312 + 468PF02518
PF14501
HATPase_c
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GHKL domain
8.60E-12
1.60E-04

Results for WP_021287374.1 [Sulfurimonas hongkongensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021287366.1 39777 41151 + 457PF03573OprDouter membrane porin, OprD family1.20E-15
WP_021287367.1 41180 42551 + 456PF07992
PF09242
PF01266
PF01946
PF13450
Pyr_redox_2
FCSD-flav_bind
DAO
Thi4
NAD_binding_8
Pyridine nucleotide-disulphide oxidoreductase
Flavocytochrome c sulphide dehydrogenase, flavin-binding
FAD dependent oxidoreductase
Thi4 family
NAD(P)-binding Rossmann-like domain
2.50E-17
1.40E-08
1.20E-05
1.40E-05
2.70E-05
WP_021287368.1 43204 42634 - 189PF01292Ni_hydr_CYTBProkaryotic cytochrome b5611.30E-26
WP_021287369.1 43237 44017 + 259PF00588SpoU_methylaseSpoU rRNA Methylase family4.60E-35
WP_223175385.1 44333 44051 - 93PF01381
PF13560
PF12844
PF13744
PF13443
HTH_3
HTH_31
HTH_19
HTH_37
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
3.90E-10
3.30E-06
4.30E-06
5.90E-06
9.80E-05
WP_031347951.1 44358 44550 + 63PF09962DUF2196Uncharacterized conserved protein (DUF2196)6.40E-30
WP_021287372.1 44549 45905 + 451PF00270
PF00271
PF03880
PF04851
PF13245
DEAD
Helicase_C
DbpA
ResIII
AAA_19
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
DbpA RNA binding domain
Type III restriction enzyme, res subunit
AAA domain
3.70E-47
4.10E-31
4.10E-22
1.10E-10
6.90E-05
WP_021287373.1 46005 46257 + 83PF01355HIPIPHigh potential iron-sulfur protein1.10E-05
WP_021287374.1 46354 47959 + 534PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-59
4.70E-04
WP_021287375.1 48102 48534 + 143PF10116Host_attachProtein required for attachment to host cells5.80E-14
WP_021287376.1 49408 48613 - 264PF00797Acetyltransf_2N-acetyltransferase5.20E-48
WP_031347953.1 49526 51392 + 621PF20250FapA_NFlagellar Assembly Protein A N-terminal region6.90E-21
WP_021287378.1 51396 51594 + 65NO PFAM MATCH---
WP_021287379.1 52280 51590 - 229NO PFAM MATCH---
WP_021287380.1 52570 52276 - 97NO PFAM MATCH---
WP_021287381.1 52728 52566 - 53NO PFAM MATCH---
WP_021287382.1 53120 52724 - 131NO PFAM MATCH---

Results for WP_021277752.1 [Bacteriovorax sp. DB6_IX] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
M901_RS08325 61 364 + 101INFERRED GENE---
WP_021277756.1 474 1854 + 459PF03924
PF00512
PF02518
CHASE
HisKA
HATPase_c
CHASE domain
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
7.70E-34
3.00E-16
1.50E-10
WP_021277758.1 1816 2428 + 203PF00072
PF02518
Response_reg
HATPase_c
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
1.20E-27
1.60E-10
WP_081653402.1 2843 2411 - 143PF00127
PF13473
Copper-bind
Cupredoxin_1
Copper binding proteins, plastocyanin/azurin family
Cupredoxin-like domain
1.00E-09
1.80E-06
WP_034721388.1 5129 2891 - 745PF00141peroxidasePeroxidase1.20E-88
WP_021277752.1 7597 5416 - 726PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
8.20E-77
7.90E-62
2.60E-10
WP_021277757.1 7747 8365 + 205PF01914MarCMarC family integral membrane protein8.40E-46
WP_021277759.1 9212 8351 - 286PF00924MS_channelMechanosensitive ion channel2.20E-14
WP_021277751.1 10030 9211 - 272PF00924MS_channelMechanosensitive ion channel7.20E-32
WP_021277754.1 10694 10019 - 224NO PFAM MATCH---

Results for WP_021325198.1 [Photorhabdus temperata subsp. temperata M1021] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021325190.1 22552 22267 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.10E-29
3.50E-08
WP_005123560.1 22622 24297 + 558INFERRED GENE---
WP_021325191.1 25163 24479 - 227PF02224
PF13189
PF13671
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.90E-80
9.50E-07
2.10E-06
3.30E-05
7.30E-05
WP_021325192.1 26631 25344 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.90E-148
WP_011145911.1 26757 27847 + 363INFERRED GENE---
WP_021325195.1 28507 28012 - 164PF13673
PF13508
PF00583
PF08445
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
FR47-like protein
3.20E-10
3.60E-10
8.30E-10
1.10E-05
WP_021325196.1 28788 28512 - 91PF08681
PF05534
DUF1778
HicB
Protein of unknown function (DUF1778)
HicB family
8.00E-28
7.10E-04
WP_005159895.1 28946 29991 + 348INFERRED GENE---
WP_021325198.1 30131 31895 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.70E-81
1.40E-67
WP_021325199.1 32222 33080 + 285PF01226Form_Nir_transFormate/nitrite transporter3.70E-74
WP_021325200.1 33134 35417 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.20E-206
4.00E-43
WP_021325202.1 35491 36232 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-31
3.30E-18
4.60E-06
WP_021325203.1 36629 36992 + 120NO PFAM MATCH---
WP_021325204.1 37026 37476 + 149PF13988DUF4225Protein of unknown function (DUF4225)1.90E-39
WP_021325205.1 38624 38144 - 159PF05638T6SS_HCPType VI secretion system effector, Hcp1.60E-19
WP_021325206.1 38994 39792 + 265NO PFAM MATCH---
WP_021325207.1 40792 39895 - 298PF13855
PF12799
PF00560
PF13306
LRR_8
LRR_4
LRR_1
LRR_5
Leucine rich repeat
Leucine Rich repeats (2 copies)
Leucine Rich Repeat
BspA type Leucine rich repeat region (6 copies)
1.50E-39
3.40E-23
7.10E-13
2.90E-06

Results for WP_021760355.1 [Megalodesulfovibrio gigas DSM 1382 = ATCC 19364] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_158407301.1 14503 15493 + 329PF13624
PF00639
PF13623
PF09312
PF13616
SurA_N_3
Rotamase
SurA_N_2
SurA_N
Rotamase_3
SurA N-terminal domain
PPIC-type PPIASE domain
SurA N-terminal domain
SurA N-terminal domain
PPIC-type PPIASE domain
9.60E-14
4.80E-12
9.10E-10
6.90E-09
2.40E-05
WP_021760347.1 15517 16606 + 362PF13413
PF13464
PF13560
HTH_25
DUF4115
HTH_31
Helix-turn-helix domain
Domain of unknown function (DUF4115)
Helix-turn-helix domain
1.40E-15
9.10E-09
7.90E-04
WP_021760348.1 16716 17484 + 255PF11967
PF02565
RecO_N
RecO_C
Recombination protein O N terminal
Recombination protein O C terminal
3.40E-16
3.20E-08
WP_021760349.1 17518 18388 + 289PF02091tRNA-synt_2eGlycyl-tRNA synthetase alpha subunit2.10E-149
WP_021760350.1 18409 20485 + 691PF02092
PF05746
tRNA_synt_2f
DALR_1
Glycyl-tRNA synthetase beta subunit
DALR anticodon binding domain
1.80E-191
3.50E-08
WP_051286677.1 20795 21584 + 262PF04016DUF364Putative heavy-metal chelation2.90E-34
WP_021760352.1 22118 21800 - 105NO PFAM MATCH---
WP_021760353.1 22618 23338 + 239PF10294
PF05175
Methyltransf_16
MTS
Lysine methyltransferase
Methyltransferase small domain
6.70E-07
1.00E-05
WP_021760355.1 23548 25330 + 593PF02624
PF07719
PF00515
PF13181
PF13176
YcaO
TPR_2
TPR_1
TPR_8
TPR_7
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.40E-64
1.30E-11
2.40E-07
8.20E-07
9.10E-06
WP_021760357.1 25634 25952 + 105PF04358
PF01726
DsrC
LexA_DNA_bind
DsrC like protein
LexA DNA binding domain
8.40E-37
9.40E-04
WP_027193359.1 26483 26163 - 105PF12762DDE_Tnp_IS1595ISXO2-like transposase domain1.10E-13

Results for WP_021275509.1 [Bacteriovorax sp. Seq25_V] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021275500.1 98688 98232 - 151PF04314PCuACCopper chaperone PCu(A)C6.50E-32
WP_021275578.1 99278 98684 - 197PF02630
PF13905
SCO1-SenC
Thioredoxin_8
SCO1/SenC
Thioredoxin-like
1.60E-27
6.20E-05
WP_021275366.1 99932 99317 - 204PF13419
PF00702
HAD_2
Hydrolase
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.50E-27
4.70E-12
WP_021275474.1 100410 100116 - 97PF12840HTH_20Helix-turn-helix domain3.00E-08
WP_052600825.1 100523 101708 + 394PF07690MFS_1Major Facilitator Superfamily5.10E-36
WP_021275566.1 101718 102768 + 349PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.10E-75
WP_021275353.1 102842 103241 + 132NO PFAM MATCH---
WP_034732780.1 103589 103283 - 101PF06127Mpo1-like2-hydroxy-palmitic acid dioxygenase Mpo1-like2.50E-36
WP_021275509.1 105778 103591 - 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.50E-79
4.90E-66
9.40E-10
WP_021275341.1 105878 106334 + 151NO PFAM MATCH---
WP_021275286.1 107396 106307 - 362PF02417Chromate_transpChromate transporter1.90E-65
WP_021275393.1 108025 107392 - 210PF07947YhhNYhhN family2.10E-47
WP_021275495.1 108353 108050 - 100NO PFAM MATCH---
WP_021275461.1 108462 108825 + 120PF06993DUF1304Protein of unknown function (DUF1304)1.40E-22
WP_021275433.1 108879 109440 + 186NO PFAM MATCH---
WP_021275624.1 109505 111794 + 762PF01326
PF00391
PPDK_N
PEP-utilizers
Pyruvate phosphate dikinase, AMP/ATP-binding domain
PEP-utilising enzyme, mobile domain
1.10E-46
3.30E-23
WP_021275531.1 111747 113157 + 469PF13570
PF13360
PQQ_3
PQQ_2
PQQ-like domain
PQQ-like domain
2.10E-13
5.80E-09

Results for WP_021272150.1 [Bacteriovorax sp. BSW11_IV] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021272112.1 74050 76414 + 787PF05226
PF00211
CHASE2
Guanylate_cyc
CHASE2 domain
Adenylate and Guanylate cyclase catalytic domain
3.20E-44
1.40E-32
WP_021272153.1 76539 77751 + 403PF04773FecRFecR protein1.10E-12
WP_021272094.1 79695 77751 - 647PF01476LysMLysM domain2.00E-04
WP_021272142.1 81184 79789 - 464PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase1.70E-14
WP_021272204.1 82068 81570 - 165PF08534
PF00578
Redoxin
AhpC-TSA
Redoxin
AhpC/TSA family
2.60E-24
2.40E-12
WP_021272100.1 82583 82127 - 151PF10973
PF00170
PF16471
DUF2799
bZIP_1
JIP_LZII
Protein of unknown function (DUF2799)
bZIP transcription factor
JNK-interacting protein leucine zipper II
4.90E-17
5.40E-04
8.70E-04
WP_021272129.1 82791 83031 + 79NO PFAM MATCH---
WP_034729611.1 83113 83836 + 240PF13645YkuD_2L,D-transpeptidase catalytic domain8.80E-25
WP_021272150.1 86044 83860 - 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.40E-76
1.00E-69
3.40E-10
WP_021272158.1 87003 86130 - 290PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
9.50E-18
5.70E-13
WP_021272220.1 87284 88418 + 377PF00587
PF03129
tRNA-synt_2b
HGTP_anticodon
tRNA synthetase class II core domain (G, H, P, S and T)
Anticodon binding domain
5.40E-41
2.00E-08
WP_034729614.1 88882 88435 - 148NO PFAM MATCH---
WP_021272223.1 89062 91897 + 944NO PFAM MATCH---
WP_021272209.1 92659 91927 - 243NO PFAM MATCH---
WP_021272108.1 94038 92760 - 425NO PFAM MATCH---
WP_021272148.1 94183 94645 + 153PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein1.30E-35
WP_021272168.1 95134 94669 - 154NO PFAM MATCH---

Results for WP_048175616.1 [Methanothermobacter sp. CaT2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048175610.1 876394 874981 - 470PF00171
PF05893
Aldedh
LuxC
Aldehyde dehydrogenase family
Acyl-CoA reductase (LuxC)
5.00E-161
1.60E-05
WP_010876610.1 876681 876489 - 63PF04021Class_IIIsignalClass III signal peptide2.20E-05
WP_048175611.1 877636 876694 - 313PF00482T2SSFType II secretion system (T2SS), protein F6.10E-23
WP_231855258.1 878697 877710 - 328PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
4.80E-54
2.80E-05
WP_231855259.1 879222 878742 - 159NO PFAM MATCH---
WP_231855260.1 879295 880513 + 405PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
3.30E-123
4.60E-19
WP_048175614.1 880525 881623 + 365PF07568
PF00989
PF02518
PF13188
PF13581
HisKA_2
PAS
HATPase_c
PAS_8
HATPase_c_2
Histidine kinase
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS domain
Histidine kinase-like ATPase domain
4.60E-31
1.50E-09
4.80E-09
1.20E-08
2.70E-08
WP_048175615.1 881804 882380 + 191PF02163Peptidase_M50Peptidase family M502.40E-07
WP_048175616.1 882389 883574 + 394PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-93
WP_048175617.1 883705 884356 + 216PF07812TfuATfuA-like protein1.70E-43
WP_048175618.1 884516 885572 + 351PF06508
PF01171
QueC
ATP_bind_3
Queuosine biosynthesis protein QueC
PP-loop family
4.70E-06
3.30E-04
WP_048175619.1 886043 885626 - 138NO PFAM MATCH---
WP_048175620.1 886881 886035 - 281PF00571CBSCBS domain1.30E-45
WP_048175621.1 887349 886917 - 143PF00582UspUniversal stress protein family8.10E-37
WP_084126216.1 888508 887353 - 384PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
9.30E-54
2.90E-08
WP_048175622.1 889958 888629 - 442PF18911
PF00801
PF07705
PKD_4
PKD
CARDB
PKD domain
PKD domain
CARDB
1.70E-19
2.10E-16
7.80E-10
WP_048175623.1 893206 890026 - 1059PF02786
PF02787
PF02222
PF02142
PF07478
CPSase_L_D2
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATP-grasp domain
MGS-like domain
D-ala D-ala ligase C-terminus
1.50E-118
3.80E-27
2.70E-18
3.70E-18
1.10E-17

Results for WP_003180177.1 back to top

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Couldn't process WP_003180177.1 Genbank filestream. May be corrupt.

Results for WP_021342368.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_021342369.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_021332673.1 [Rhodococcus erythropolis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_084325550.1 83024 82340 - 227PF00881NitroreductaseNitroreductase family1.50E-15
WP_084325551.1 84001 83020 - 326PF01497Peripla_BP_2Periplasmic binding protein8.70E-25
WP_020968054.1 84792 83997 - 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
1.60E-29
3.20E-12
7.00E-07
1.40E-05
8.00E-05
WP_021332677.1 85856 84788 - 355PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
3.40E-96
3.60E-04
WP_031330989.1 87200 85940 - 419PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
5.50E-32
9.50E-17
WP_003943543.1 87292 87481 + 62NO PFAM MATCH---
WP_084325552.1 87575 88388 + 270NO PFAM MATCH---
WP_256922197.1 88399 89812 + 470PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
5.40E-26
1.10E-08
WP_021332673.1 89804 91145 + 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-53
WP_084325553.1 91141 92434 + 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-44
WP_084325554.1 93352 92380 - 323PF04321
PF03435
RmlD_sub_bind
Sacchrp_dh_NADP
RmlD substrate binding domain
Saccharopine dehydrogenase NADP binding domain
1.40E-05
7.40E-05
WP_019746303.1 93403 94030 + 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_003943598.1 94477 94036 - 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
9.00E-10
1.40E-07
6.10E-07
9.20E-07
WP_007735886.1 95329 94588 - 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.40E-32
2.00E-10
1.90E-07
5.50E-07
7.70E-06
WP_179154684.1 96372 95325 - 348PF02687FtsXFtsX-like permease family2.50E-11
WP_021332670.1 96486 97689 + 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
2.00E-15
3.20E-07
5.80E-04
WP_019746299.1 97685 98303 + 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.00E-20
3.00E-20
1.20E-04

Results for WP_021332672.1 [Rhodococcus erythropolis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_070384752.1 204303 203064 - 412PF02720
PF01844
DUF222
HNH
Domain of unknown function (DUF222)
HNH endonuclease
9.80E-32
1.70E-06
WP_019746299.1 205013 204395 - 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.00E-20
3.00E-20
1.20E-04
WP_070384753.1 206212 205009 - 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
2.00E-15
9.60E-07
8.70E-04
WP_029254139.1 206326 207373 + 348PF02687FtsXFtsX-like permease family2.50E-11
WP_081341267.1 207369 208110 + 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.50E-32
2.20E-10
2.40E-07
8.60E-07
7.60E-06
WP_070384754.1 208221 208662 + 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
8.60E-10
2.00E-07
2.50E-07
7.20E-07
WP_019746303.1 209295 208668 - 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_070384755.1 209346 210318 + 323PF04321
PF03435
RmlD_sub_bind
Sacchrp_dh_NADP
RmlD substrate binding domain
Saccharopine dehydrogenase NADP binding domain
1.20E-05
7.80E-05
WP_021332672.1 211557 210264 - 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-43
WP_070384756.1 212894 211553 - 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-53
WP_021332674.1 214314 212886 - 475PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
7.40E-27
1.00E-08
WP_070384757.1 215123 214310 - 270NO PFAM MATCH---
WP_003943543.1 215406 215217 - 62NO PFAM MATCH---
WP_070384758.1 215498 216758 + 419PF05977
PF07690
PF12832
MFS_3
MFS_1
MFS_1_like
Transmembrane secretion effector
Major Facilitator Superfamily
MFS_1 like family
1.10E-31
1.80E-16
6.30E-04
WP_019746312.1 216842 217910 + 355PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
3.40E-96
3.60E-04
WP_070384759.1 217906 218701 + 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
7.90E-30
3.20E-12
6.90E-07
1.40E-05
8.40E-05
WP_070384760.1 218697 219678 + 326PF01497Peripla_BP_2Periplasmic binding protein1.80E-23

Results for WP_021198358.1 [Microbacterium maritypicum MF109] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021198350.1 18821 19859 + 345PF13515
PF06081
PF04632
FUSC_2
ArAE_1
FUSC
Fusaric acid resistance protein-like
Aromatic acid exporter family member 1
Fusaric acid resistance protein family
1.90E-17
3.90E-14
3.70E-08
WP_021198351.1 19878 20547 + 222PF08713DNA_alkylationDNA alkylation repair enzyme9.10E-18
WP_021198352.1 20617 21331 + 237PF01048PNP_UDP_1Phosphorylase superfamily2.30E-39
WP_021198353.1 22865 21353 - 503PF00474SSFSodium:solute symporter family2.10E-97
WP_021198354.1 23015 25550 + 844PF12029
PF00270
PF00271
DUF3516
DEAD
Helicase_C
Domain of unknown function (DUF3516)
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
5.40E-192
7.50E-10
6.60E-06
WP_021198355.1 27220 25510 - 569PF00005
PF00664
PF02463
PF13555
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA ATPase domain
4.30E-28
1.10E-15
1.90E-04
2.50E-04
3.40E-04
WP_021198356.1 28872 27216 - 551PF00005
PF00664
PF02463
PF13304
PF13555
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.70E-26
1.60E-14
9.50E-07
2.50E-05
2.80E-04
WP_021198357.1 29888 28868 - 339NO PFAM MATCH---
WP_021198358.1 31300 29896 - 467PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.80E-40
WP_021198359.1 32274 31296 - 325PF02129
PF12146
Peptidase_S15
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
Serine aminopeptidase, S33
2.90E-15
3.30E-07
WP_021198360.1 33071 32270 - 266NO PFAM MATCH---
WP_017831216.1 33255 33156 - 32NO PFAM MATCH---
WP_021198361.1 33370 34576 + 401NO PFAM MATCH---
WP_021198362.1 34572 36369 + 598PF00326
PF12146
Peptidase_S9
Hydrolase_4
Prolyl oligopeptidase family
Serine aminopeptidase, S33
3.90E-28
5.30E-04
WP_021198363.1 36365 37514 + 382PF01032FecCDFecCD transport family7.00E-93
WP_021198364.1 37510 38290 + 259PF00005
PF13304
PF02463
PF13191
PF13555
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
1.10E-31
7.60E-10
2.40E-05
8.40E-05
2.80E-04
WP_021198365.1 38347 39364 + 338PF01497Peripla_BP_2Periplasmic binding protein4.40E-23

Results for WP_021462211.1 [Gallibacterium anatis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013745091.1 60072 59619 - 150PF00293NUDIXNUDIX domain1.20E-19
WP_039165959.1 60969 60075 - 297PF13739
PF11738
PdaC
DUF3298
Deacetylase PdaC
Protein of unknown function (DUF3298)
2.30E-05
6.60E-04
WP_021462209.1 62752 60982 - 589PF00152
PF02938
PF01336
PF01409
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA synthetases class II (D, K and N)
GAD domain
OB-fold nucleic acid binding domain
tRNA synthetases class II core domain (F)
1.30E-104
2.20E-31
8.70E-17
7.10E-04
WP_013745094.1 63574 62845 - 242PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
9.30E-15
1.20E-11
4.80E-11
1.60E-09
2.40E-08
WP_013745095.1 64678 63661 - 338PF01063Aminotran_4Amino-transferase class IV1.60E-37
WP_018345879.1 65774 64841 - 310PF02866
PF00056
Ldh_1_C
Ldh_1_N
lactate/malate dehydrogenase, alpha/beta C-terminal domain
lactate/malate dehydrogenase, NAD binding domain
1.50E-50
5.80E-46
WP_031205037.1 66006 66471 + 154PF02863
PF01316
Arg_repressor_C
Arg_repressor
Arginine repressor, C-terminal domain
Arginine repressor, DNA binding domain
3.60E-23
1.80E-22
WP_021462210.1 66491 67382 + 296PF01370
PF08338
PF16363
PF04321
PF07993
Epimerase
DUF1731
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
NAD dependent epimerase/dehydratase family
Domain of unknown function (DUF1731)
GDP-mannose 4,6 dehydratase
RmlD substrate binding domain
Male sterility protein
2.20E-19
3.80E-18
1.90E-11
5.00E-06
9.40E-05
WP_021462211.1 67555 69313 + 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.10E-82
9.80E-65
WP_021462212.1 69838 69382 - 151NO PFAM MATCH---
WP_039165960.1 72038 69863 - 724PF12805
PF13515
PF04632
FUSC-like
FUSC_2
FUSC
FUSC-like inner membrane protein yccS
Fusaric acid resistance protein-like
Fusaric acid resistance protein family
1.00E-90
4.00E-22
3.40E-08
WP_039165962.1 72484 72049 - 144PF03733YccFInner membrane component domain1.80E-29
WP_039165963.1 72946 72487 - 152PF02142MGSMGS-like domain7.70E-17
WP_039165965.1 73685 73025 - 219PF09829DUF2057Uncharacterized protein conserved in bacteria (DUF2057)2.70E-56
WP_039147955.1 73777 74050 + 90PF00708AcylphosphataseAcylphosphatase3.50E-27
WP_039165968.1 74886 74046 - 279PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
7.40E-88
4.10E-06
WP_039165969.1 75747 74895 - 283PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
2.00E-86
5.60E-06

Results for WP_010557920.1 [Pseudoalteromonas marina] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010557915.1 74319 74685 + 121PF09685DUF4870Domain of unknown function (DUF4870)5.50E-41
WP_006792491.1 74754 75189 + 144PF09335
PF06695
SNARE_assoc
Sm_multidrug_ex
SNARE associated Golgi protein
Putative small multi-drug export protein
6.90E-15
8.20E-04
WP_008129424.1 75558 75201 - 118PF02152FolBDihydroneopterin aldolase7.60E-28
WP_010557916.1 76116 75561 - 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.50E-77
WP_010557917.1 76853 76133 - 239PF13561
PF00106
PF08659
PF01370
PF05368
adh_short_C2
adh_short
KR
Epimerase
NmrA
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NmrA-like family
1.00E-28
1.80E-25
6.00E-08
7.30E-06
5.30E-04
WP_006792487.1 77819 76988 - 276PF02540NAD_synthaseNAD synthase1.60E-63
WP_010557918.1 78517 77887 - 209PF04337DUF480Protein of unknown function, DUF4802.30E-60
WP_010557919.1 81925 78568 - 1118PF02518
PF00072
PF00512
PF03924
PF01590
HATPase_c
Response_reg
HisKA
CHASE
GAF
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
GAF domain
3.40E-28
3.30E-26
4.50E-19
1.80E-16
8.00E-06
WP_010557920.1 83798 82037 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-78
2.70E-57
WP_033035591.1 83945 86228 + 760PF01804Penicil_amidasePenicillin amidase4.00E-119
WP_010557922.1 86285 87134 + 282PF00753Lactamase_BMetallo-beta-lactamase superfamily1.00E-08
WP_008129436.1 87222 88755 + 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
6.00E-32
7.70E-05
WP_006792480.1 88754 89072 + 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein2.20E-21
WP_033035593.1 89817 89121 - 231PF00561Abhydrolase_1alpha/beta hydrolase fold4.40E-06
WP_010557924.1 90713 89834 - 292PF00892EamAEamA-like transporter family1.10E-09
WP_010557925.1 90969 91353 + 127PF01124MAPEGMAPEG family2.20E-20
WP_010557926.1 92638 91426 - 403PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
2.60E-36
9.40E-18

Results for WP_010362044.1 [Pseudoalteromonas citrea] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010362036.1 200628 201741 + 370PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain4.80E-04
WP_010362037.1 201743 202571 + 275PF00551Formyl_trans_NFormyl transferase1.90E-15
WP_010362038.1 202665 203721 + 351PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
1.50E-09
2.50E-07
3.30E-06
WP_010362039.1 203722 206788 + 1021PF00873
PF02355
PF03176
ACR_tran
SecD_SecF
MMPL
AcrB/AcrD/AcrF family
Protein export membrane protein
MMPL family
2.80E-140
1.30E-09
3.40E-09
WP_010362040.1 207613 207187 - 141PF18492ORF_2_NOpen reading frame 2 N-terminal domain1.10E-09
WP_010362041.1 209420 207623 - 598PF00082
PF01483
Peptidase_S8
P_proprotein
Subtilase family
Proprotein convertase P-domain
1.30E-34
7.80E-19
WP_010362042.1 211884 209592 - 763PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
3.30E-34
1.50E-13
WP_010362043.1 212072 212294 + 73NO PFAM MATCH---
WP_010362044.1 212536 214720 + 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-72
3.90E-71
7.40E-08
WP_010362045.1 215686 214786 - 299PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-33
6.10E-17
WP_010362046.1 215802 216105 + 100NO PFAM MATCH---
WP_010362047.1 216485 216131 - 117PF08888HopJHopJ type III effector protein3.90E-44
WP_010362048.1 217810 216592 - 405PF08450
PF16819
SGL
DUF5074
SMP-30/Gluconolactonase/LRE-like region
Domain of unknown function (DUF5074)
6.40E-05
9.30E-04
WP_010362049.1 218864 218234 - 209PF04299FMN_bind_2Putative FMN-binding domain3.00E-26
WP_010362050.1 219436 218860 - 191PF13302Acetyltransf_3Acetyltransferase (GNAT) domain1.20E-19
WP_010362051.1 219613 221101 + 495PF00155
PF00392
PF12897
Aminotran_1_2
GntR
Asp_aminotransf
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
Aspartate amino-transferase
1.00E-22
9.00E-14
6.90E-05
WP_021032382.1 221661 221175 - 161PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)2.80E-06

Results for WP_021606509.1 [Actinomyces johnsonii F0510] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_039894065.1 0 219 + 72NO PFAM MATCH---
WP_021606508.1 998 239 - 252PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
9.20E-22
7.20E-15
3.00E-04
WP_021606509.1 1264 2620 + 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-60
WP_039894068.1 2686 3415 + 242NO PFAM MATCH---

Results for WP_010380440.1 [Pseudoalteromonas rubra] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010380425.1 748061 747470 - 196PF13505OMP_b-brlOuter membrane protein beta-barrel domain1.10E-05
WP_010380427.1 748255 750439 + 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.50E-74
2.50E-71
3.80E-09
WP_010380429.1 752682 750633 - 682PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-75
WP_010380431.1 753812 752678 - 377PF04909Amidohydro_2Amidohydrolase4.70E-23
WP_010380432.1 754591 753820 - 256PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)1.10E-19
WP_010380434.1 755621 754634 - 328NO PFAM MATCH---
WP_242065297.1 757266 755787 - 492PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-74
WP_010380438.1 759553 757789 - 587PF00733
PF13537
PF13522
PF12481
PF02540
Asn_synthase
GATase_7
GATase_6
DUF3700
NAD_synthase
Asparagine synthase
Glutamine amidotransferase domain
Glutamine amidotransferase domain
Aluminium induced protein
NAD synthase
4.00E-54
1.10E-30
2.80E-27
1.50E-05
6.90E-05
WP_010380440.1 761533 759622 - 636PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-67
WP_010380441.1 762201 761529 - 223NO PFAM MATCH---
WP_010380443.1 762989 762233 - 251NO PFAM MATCH---
WP_010380445.1 766914 762978 - 1311PF00069
PF07714
PF13191
PF03109
PF13401
Pkinase
PK_Tyr_Ser-Thr
AAA_16
ABC1
AAA_22
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
ABC1 atypical kinase-like domain
AAA domain
1.70E-50
1.30E-28
8.70E-13
3.10E-05
1.20E-04
WP_010380447.1 767369 768098 + 242NO PFAM MATCH---
WP_010380449.1 768194 769433 + 412NO PFAM MATCH---
WP_010380451.1 769443 770415 + 323PF00551
PF02911
Formyl_trans_N
Formyl_trans_C
Formyl transferase
Formyl transferase, C-terminal domain
1.50E-15
9.90E-11
WP_010380453.1 770587 771061 + 157NO PFAM MATCH---
WP_010380455.1 771230 771845 + 204PF07484CollarPhage Tail Collar Domain5.70E-20

Results for WP_021609085.1 [Actinomyces johnsonii F0542] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
HMPREF1979_RS16340 0 274 + 91INFERRED GENE---
WP_009232837.1 1053 294 - 252PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
9.20E-22
7.20E-15
3.00E-04
WP_021609085.1 1319 2675 + 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-61
WP_009232839.1 2741 3470 + 242NO PFAM MATCH---
WP_051263529.1 3471 4748 + 425NO PFAM MATCH---

Results for WP_010367382.1 [Pseudoalteromonas citrea] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010367362.1 122503 120550 - 650PF00015
PF02743
PF00672
PF08269
MCPsignal
dCache_1
HAMP
dCache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
Cache domain
1.00E-44
2.10E-26
3.30E-10
3.30E-04
WP_010367364.1 123970 122659 - 436PF00158
PF00072
PF14532
Sigma54_activat
Response_reg
Sigma54_activ_2
Sigma-54 interaction domain
Response regulator receiver domain
Sigma-54 interaction domain
4.30E-67
8.90E-28
3.50E-21
WP_010367366.1 124515 123966 - 182NO PFAM MATCH---
WP_010367368.1 125954 124517 - 478PF02518
PF00512
PF13589
HATPase_c
HisKA
HATPase_c_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
5.40E-15
7.20E-13
8.00E-05
WP_010367375.1 126345 126561 + 71PF13202
PF00036
PF13405
PF13499
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_7
EF hand
EF hand
EF-hand domain
EF-hand domain pair
2.30E-11
3.00E-09
2.00E-07
1.10E-06
WP_010367377.1 126611 126833 + 73PF00036
PF13405
PF13499
PF13202
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF hand
EF-hand domain
EF-hand domain pair
EF hand
2.70E-08
5.50E-07
1.80E-06
2.10E-06
WP_010367379.1 126909 127116 + 68PF00036
PF13202
PF13405
PF13499
PF13833
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_7
EF-hand_8
EF hand
EF hand
EF-hand domain
EF-hand domain pair
EF-hand domain pair
7.70E-12
2.20E-11
7.30E-11
9.00E-09
2.00E-07
WP_010367381.1 127781 127187 - 197PF13505
PF01389
OMP_b-brl
OmpA_membrane
Outer membrane protein beta-barrel domain
OmpA-like transmembrane domain
3.40E-05
1.40E-04
WP_010367382.1 130090 127993 - 698PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-72
WP_010367383.1 131245 130093 - 383PF04909Amidohydro_2Amidohydrolase7.50E-25
WP_010367385.1 131990 131234 - 251PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)6.30E-13
WP_010367387.1 132886 132028 - 285NO PFAM MATCH---
WP_010367389.1 133468 132934 - 177NO PFAM MATCH---
WP_010367391.1 134145 133479 - 221PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)2.10E-04
WP_157592815.1 134914 134134 - 259NO PFAM MATCH---
WP_192992771.1 136530 135321 - 402PF00872
PF10551
Transposase_mut
MULE
Transposase, Mutator family
MULE transposase domain
2.20E-121
1.40E-06
WP_010361979.1 139343 136556 - 928PF00069
PF07714
PF13191
PF00211
PF00931
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Guanylate_cyc
NB-ARC
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
NB-ARC domain
1.70E-50
1.20E-28
9.10E-15
3.10E-07
3.20E-05

Results for WP_010364814.1 [Pseudoalteromonas citrea] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010362570.1 368842 370354 + 503PF04293SpoVRSpoVR like protein2.10E-173
WP_010362569.1 371416 370444 - 323PF00990
PF08448
PF00989
GGDEF
PAS_4
PAS
Diguanylate cyclase, GGDEF domain
PAS fold
PAS fold
2.40E-45
3.80E-05
1.70E-04
WP_010362568.1 372425 371420 - 334PF00072
PF13690
Response_reg
CheX
Response regulator receiver domain
Chemotaxis phosphatase CheX
1.90E-24
2.30E-06
WP_238348000.1 372667 373210 + 180PF08534
PF00578
Redoxin
AhpC-TSA
Redoxin
AhpC/TSA family
1.10E-21
6.00E-21
WP_192992771.1 374458 373249 - 402PF00872
PF10551
Transposase_mut
MULE
Transposase, Mutator family
MULE transposase domain
2.20E-121
1.40E-06
WP_010364811.1 375220 374575 - 214PF00406
PF13207
PF05191
PF13238
PF17213
ADK
AAA_17
ADK_lid
AAA_18
Hydin_ADK
Adenylate kinase
AAA domain
Adenylate kinase, active site lid
AAA domain
Hydin Adenylate kinase-like domain
2.80E-57
9.10E-25
2.80E-16
1.70E-04
1.90E-04
WP_010364812.1 377289 375375 - 637PF00183
PF02518
PF13589
HSP90
HATPase_c
HATPase_c_3
Hsp90 protein
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
8.30E-137
7.50E-15
5.40E-12
WP_010364813.1 378672 377700 - 323PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann fold1.50E-18
WP_010364814.1 381120 378687 - 810PF02624
PF00899
YcaO
ThiF
YcaO cyclodehydratase, ATP-ad Mg2+-binding
ThiF family
6.10E-61
2.00E-19
WP_010364815.1 381206 381458 + 83NO PFAM MATCH---
WP_192992775.1 381794 381581 - 70NO PFAM MATCH---
WP_010364816.1 383345 382223 - 373NO PFAM MATCH---
WP_010364817.1 384395 383792 - 200PF13662
PF01751
PF02132
Toprim_4
Toprim
RecR
Toprim domain
Toprim domain
RecR protein
7.70E-26
1.70E-13
1.30E-11
WP_084622616.1 386005 384868 - 378PF12698
PF12679
PF01061
ABC2_membrane_3
ABC2_membrane_2
ABC2_membrane
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 type transporter
2.30E-20
1.60E-19
1.10E-07
WP_010364819.1 386736 386001 - 244PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
5.50E-25
1.50E-05
2.50E-05
WP_010364820.1 388261 386719 - 513PF08386
PF00561
Abhydrolase_4
Abhydrolase_1
TAP-like protein
alpha/beta hydrolase fold
8.80E-17
1.00E-16
WP_010364821.1 391159 388516 - 880PF01131
PF01751
PF08272
PF01396
Topoisom_bac
Toprim
Topo_Zn_Ribbon
zf-C4_Topoisom
DNA topoisomerase
Toprim domain
Topoisomerase I zinc-ribbon-like
Topoisomerase DNA binding C4 zinc finger
1.80E-129
2.00E-32
2.40E-31
9.90E-17

Results for WP_010380427.1 [Pseudoalteromonas rubra] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010380410.1 743531 742121 - 469PF02518
PF00512
PF13581
PF00672
HATPase_c
HisKA
HATPase_c_2
HAMP
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
HAMP domain
4.00E-17
1.20E-12
9.30E-05
1.20E-04
WP_010380412.1 743818 744040 + 73PF13202
PF00036
PF13405
PF13499
PF13833
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF hand
EF hand
EF-hand domain
EF-hand domain pair
EF-hand domain pair
5.00E-12
8.90E-11
5.60E-09
2.60E-07
7.60E-07
WP_010380414.1 744066 744294 + 75PF13202
PF00036
PF13405
PF13499
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_7
EF hand
EF hand
EF-hand domain
EF-hand domain pair
1.90E-09
1.00E-07
4.50E-06
1.40E-04
WP_010380416.1 744304 744511 + 68PF13202
PF00036
PF13833
PF13405
PF13499
EF-hand_5
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF hand
EF hand
EF-hand domain pair
EF-hand domain
EF-hand domain pair
9.00E-14
1.50E-13
2.40E-11
7.70E-11
1.10E-08
WP_010380418.1 745179 744621 - 185PF13302
PF00583
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
9.00E-29
8.20E-10
5.50E-04
WP_242065295.1 746366 745199 - 388PF07690
PF06609
MFS_1
TRI12
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
1.00E-33
1.40E-04
WP_010380423.1 746473 747349 + 291PF03466
PF00126
PF15513
LysR_substrate
HTH_1
DUF4651
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Domain of unknown function (DUF4651)
3.40E-30
3.20E-18
2.40E-04
WP_010380425.1 748061 747470 - 196PF13505OMP_b-brlOuter membrane protein beta-barrel domain1.10E-05
WP_010380427.1 748255 750439 + 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.50E-74
2.50E-71
3.80E-09
WP_010380429.1 752682 750633 - 682PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-75
WP_010380431.1 753812 752678 - 377PF04909Amidohydro_2Amidohydrolase4.70E-23
WP_010380432.1 754591 753820 - 256PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)1.10E-19
WP_010380434.1 755621 754634 - 328NO PFAM MATCH---
WP_242065297.1 757266 755787 - 492PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-74
WP_010380438.1 759553 757789 - 587PF00733
PF13537
PF13522
PF12481
PF02540
Asn_synthase
GATase_7
GATase_6
DUF3700
NAD_synthase
Asparagine synthase
Glutamine amidotransferase domain
Glutamine amidotransferase domain
Aluminium induced protein
NAD synthase
4.00E-54
1.10E-30
2.80E-27
1.50E-05
6.90E-05
WP_010380440.1 761533 759622 - 636PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-67
WP_010380441.1 762201 761529 - 223NO PFAM MATCH---

Results for WP_021615771.1 [Aggregatibacter sp. oral taxon 458 str. W10330] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021615763.1 145818 147720 + 633PF00012
PF06723
HSP70
MreB_Mbl
Hsp70 protein
MreB/Mbl protein
4.80E-267
1.40E-14
WP_021615764.1 147840 148239 + 132PF14526Cass2Integron-associated effector binding protein1.00E-08
WP_021615765.1 148316 149585 + 422PF01053
PF01041
PF00266
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
1.30E-125
5.00E-05
1.90E-04
WP_021615766.1 149855 150980 + 374PF01556
PF00226
PF00684
PF17302
PF15777
DnaJ_C
DnaJ
DnaJ_CXXCXGXG
DUF5351
Anti-TRAP
DnaJ C terminal domain
DnaJ domain
DnaJ central domain
Family of unknown function (DUF5351)
Tryptophan RNA-binding attenuator protein inhibitory protein
1.50E-47
5.10E-28
2.30E-15
1.60E-05
8.30E-04
WP_021615767.1 151275 153546 + 756PF02867
PF03477
PF00317
Ribonuc_red_lgC
ATP-cone
Ribonuc_red_lgN
Ribonucleotide reductase, barrel domain
ATP cone domain
Ribonucleotide reductase, all-alpha domain
3.30E-126
3.00E-18
9.00E-12
WP_021615768.1 153561 154473 + 303PF18864AbiTiiAbiTii2.00E-42
WP_005700384.1 154472 155603 + 376PF00268Ribonuc_red_smRibonucleotide reductase, small chain1.70E-47
WP_021615770.1 155785 157171 + 461PF13365
PF00595
PF02163
PF13180
PF17820
Trypsin_2
PDZ
Peptidase_M50
PDZ_2
PDZ_6
Trypsin-like peptidase domain
PDZ domain
Peptidase family M50
PDZ domain
PDZ domain
5.80E-32
5.90E-32
1.20E-25
1.70E-25
1.20E-24
WP_021615771.1 159040 157276 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.20E-79
4.10E-64
WP_033002471.1 160316 159113 - 400PF20511PMI_typeI_catPhosphomannose isomerase type I, catalytic domain4.30E-31
WP_021615773.1 160512 160845 + 110PF07411DUF1508Domain of unknown function (DUF1508)1.80E-39
WP_021615774.1 161866 161017 - 282PF00889EF_TSElongation factor TS8.90E-66
WP_021615775.1 162731 162008 - 240PF00318Ribosomal_S2Ribosomal protein S21.30E-89
WP_033002458.1 163344 163014 - 109PF00462GlutaredoxinGlutaredoxin4.50E-19
WP_021615777.1 164229 163425 - 267PF04536
PF07172
TPM_phosphatase
GRP
TPM domain
Glycine rich protein family
2.20E-38
3.00E-07
WP_021615778.1 164671 164221 - 149PF04536TPM_phosphataseTPM domain1.20E-17
WP_021615779.1 165274 164692 - 193PF04011LemALemA family7.00E-57

Results for WP_021624657.1 [Aneurinibacillus aneurinilyticus ATCC 12856] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021624655.1 552 255 - 98NO PFAM MATCH---
WP_021624656.1 2339 761 - 525PF00881NitroreductaseNitroreductase family8.70E-15
WP_021624657.1 4305 2361 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-86
WP_021624658.1 6266 4304 - 653NO PFAM MATCH---
WP_021624660.1 6580 6919 + 112PF17886ArsA_HSP20HSP20-like domain found in ArsA7.80E-06
WP_021624661.1 8073 7029 - 347PF00082Peptidase_S8Subtilase family6.30E-59
WP_021624663.1 8416 9073 + 218PF13472
PF00657
Lipase_GDSL_2
Lipase_GDSL
GDSL-like Lipase/Acylhydrolase family
GDSL-like Lipase/Acylhydrolase
4.30E-18
4.10E-09
WP_021624664.1 9905 9122 - 260PF20613
PF00454
PF07804
HipA_2
PI3_PI4_kinase
HipA_C
HipA-like kinase
Phosphatidylinositol 3- and 4-kinase
HipA-like C-terminal domain
2.50E-07
6.40E-05
8.20E-04
WP_240961493.1 10471 10540 + 22PF09680YjcZ_2Family of unknown function4.60E-06
WP_021624667.1 11989 10720 - 422PF02272
PF01368
DHHA1
DHH
DHHA1 domain
DHH family
8.20E-06
3.80E-04
WP_021624670.1 12789 12483 - 101NO PFAM MATCH---

Results for WP_021493020.1 [Pseudomonas simiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010210182.1 14792 15149 + 118PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily1.30E-08
WP_045792055.1 15296 15839 + 180PF13238AAA_18AAA domain5.00E-05
WP_010210180.1 15925 16546 + 206PF01810LysELysE type translocator7.70E-25
WP_137206015.1 17441 16622 - 272NO PFAM MATCH---
WP_003210358.1 17738 17852 + 38INFERRED GENE---
WP_010210176.1 17950 18433 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase9.90E-46
WP_252959485.1 19326 18429 - 298PF00657Lipase_GDSLGDSL-like Lipase/Acylhydrolase3.10E-25
WP_021493021.1 19711 20575 + 287PF00701DHDPSDihydrodipicolinate synthetase family9.80E-54
WP_021493020.1 22957 20758 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.40E-75
8.80E-71
3.30E-08
WP_010210169.1 23119 24685 + 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
2.40E-49
9.60E-13
4.50E-09
4.60E-09
3.50E-04
WP_042572280.1 24812 25433 + 206PF01810LysELysE type translocator8.60E-29
WP_252959486.1 26150 25493 - 218PF13578
PF01596
Methyltransf_24
Methyltransf_3
Methyltransferase domain
O-methyltransferase
2.70E-13
4.00E-12
WP_198729563.1 26261 26894 + 210PF17923
PF00440
PF17918
TetR_C_18
TetR_N
TetR_C_15
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
7.70E-37
1.90E-14
1.90E-05
WP_010210163.1 26923 27196 + 90NO PFAM MATCH---
WP_044287261.1 28781 27350 - 476PF00171AldedhAldehyde dehydrogenase family2.50E-150
WP_031291298.1 28904 29807 + 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.10E-39
4.80E-17
WP_031291295.1 30515 32171 + 551PF00015
PF12729
MCPsignal
4HB_MCP_1
Methyl-accepting chemotaxis protein (MCP) signalling domain
Four helix bundle sensory module for signal transduction
8.60E-43
4.10E-08

Results for WP_021446314.1 [Pseudomonas sp. EGD-AK9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031304207.1 451 1111 + 219PF00775
PF13620
Dioxygenase_C
CarboxypepD_reg
Dioxygenase
Carboxypeptidase regulatory-like domain
9.20E-32
3.50E-06
WP_021446310.1 1162 1483 + 106PF00581RhodaneseRhodanese-like domain7.70E-07
WP_021446311.1 1593 2337 + 247PF13649
PF08241
PF08242
PF13847
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.20E-10
9.40E-08
1.30E-06
2.60E-05
6.60E-04
WP_031304209.1 2502 3135 + 210NO PFAM MATCH---
WP_021446313.1 3721 3172 - 182NO PFAM MATCH---
WP_021446314.1 3937 6136 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.90E-75
9.20E-73
1.30E-07
WP_021446315.1 6829 6298 - 176PF01797Y1_TnpTransposase IS200 like2.70E-07
WP_021446316.1 7199 6899 - 99NO PFAM MATCH---
WP_021446317.1 8051 7349 - 233PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
3.10E-39
1.20E-10
WP_021446318.1 8171 9071 + 299PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-28
4.70E-18
WP_021446319.1 10055 9626 - 142NO PFAM MATCH---
WP_082457961.1 12772 11557 - 404PF12686DUF3800Protein of unknown function (DUF3800)2.80E-13
WP_021446321.1 13966 12866 - 365PF00268Ribonuc_red_smRibonucleotide reductase, small chain7.90E-87

Results for WP_021674572.1 [Peptostreptococcaceae bacterium oral taxon 113 str. W5053] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021674566.1 1630 586 - 347PF01497Peripla_BP_2Periplasmic binding protein2.60E-28
WP_021674567.1 2470 1675 - 264PF00005
PF13304
PF02463
PF01078
PF13191
ABC_tran
AAA_21
SMC_N
Mg_chelatase
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Magnesium chelatase, subunit ChlI
AAA ATPase domain
1.70E-29
6.30E-10
1.60E-06
6.60E-06
1.40E-05
WP_036740578.1 3485 2474 - 336PF01032FecCDFecCD transport family1.00E-88
WP_021674569.1 5319 3540 - 592PF00005
PF00664
PF02463
PF13191
PF13479
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_24
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
7.30E-30
1.20E-26
2.80E-10
1.30E-04
6.00E-04
WP_021674570.1 7066 5311 - 584PF00005
PF00664
PF02463
PF08039
ABC_tran
ABC_membrane
SMC_N
Mit_proteolip
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Mitochondrial proteolipid
1.40E-27
4.10E-21
1.80E-06
6.00E-04
WP_081695473.1 8299 7075 - 407PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.10E-11
3.30E-10
1.40E-06
WP_021674572.1 10490 8243 - 748PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.80E-54
WP_021674573.1 12250 10492 - 585PF04055Radical_SAMRadical SAM superfamily7.40E-12

Results for WP_002963034.1 [Streptococcus sobrinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002962923.1 506181 506538 + 118PF03960
PF00462
ArsC
Glutaredoxin
ArsC family
Glutaredoxin
6.00E-16
1.00E-07
WP_002962921.1 508393 506620 - 590PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
1.50E-45
1.30E-04
WP_002962920.1 508586 509138 + 183PF00440
PF14278
PF19776
TetR_N
TetR_C_8
DUF6262
Bacterial regulatory proteins, tetR family
Transcriptional regulator C-terminal region
Family of unknown function (DUF6262)
4.20E-09
4.90E-07
3.70E-04
WP_019790227.1 509313 509417 + 34INFERRED GENE---
WP_002963037.1 509529 510393 + 287PF12844
PF01381
PF13560
HTH_19
HTH_3
HTH_31
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
3.40E-06
3.10E-05
1.10E-04
WP_100206647.1 510806 510977 + 56PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.90E-09
WP_002963036.1 511055 511991 + 311NO PFAM MATCH---
WP_002963035.1 511971 512631 + 219NO PFAM MATCH---
WP_002963034.1 512633 514310 + 558PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-46
WP_019777475.1 514326 515175 + 282PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.80E-30
WP_019773382.1 515285 516221 + 311PF13936
PF00665
PF13565
PF13384
PF13551
HTH_38
rve
HTH_32
HTH_23
HTH_29
Helix-turn-helix domain
Integrase core domain
Homeodomain-like domain
Homeodomain-like domain
Winged helix-turn helix
1.60E-15
5.20E-09
1.30E-08
3.60E-05
9.40E-04
WP_050585027.1 516207 517032 + 274PF00881NitroreductaseNitroreductase family4.20E-06
WP_002962656.1 517032 517785 + 250NO PFAM MATCH---
WP_019777473.1 517797 518877 + 359PF01546Peptidase_M20Peptidase family M20/M25/M403.10E-13
WP_002962658.1 518876 521246 + 789NO PFAM MATCH---
WP_002962659.1 521324 521999 + 224PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.90E-31
7.90E-11
1.10E-05
WP_002962660.1 522000 522720 + 239NO PFAM MATCH---

Results for WP_021678224.1 [Porphyromonas gingivalis F0566] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043895288.1 4784 6016 + 409PF12696
PF02534
PF10412
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
TraM recognition site of TraD and TraG
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
1.50E-15
1.50E-11
1.10E-10
WP_021678216.1 6428 7297 + 288PF12696
PF10412
PF02534
TraG-D_C
TrwB_AAD_bind
T4SS-DNA_transf
TraM recognition site of TraD and TraG
Type IV secretion-system coupling protein DNA-binding domain
Type IV secretory system Conjugative DNA transfer
8.10E-16
5.90E-11
9.20E-10
WP_021678218.1 8902 7744 - 385PF01609
PF14294
DDE_Tnp_1
DUF4372
Transposase DDE domain
Domain of unknown function (DUF4372)
6.40E-29
1.80E-24
WP_021678219.1 9397 8995 - 133NO PFAM MATCH---
WP_005874993.1 9393 9479 + 28INFERRED GENE---
WP_080657742.1 10027 9652 - 124PF09357RteCRteC protein1.60E-26
WP_021678222.1 10896 10547 - 116NO PFAM MATCH---
WP_021678223.1 13105 10897 - 735PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
2.00E-33
3.70E-29
4.90E-27
4.50E-07
3.60E-04
WP_021678224.1 14999 13190 - 602PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-55
WP_021678225.1 17345 15014 - 776PF14905
PF13715
PF13620
OMP_b-brl_3
CarbopepD_reg_2
CarboxypepD_reg
Outer membrane protein beta-barrel family
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
4.70E-35
1.30E-06
7.50E-04
WP_021678226.1 19192 17362 - 609PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-50
WP_021678227.1 20360 19193 - 388PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-12
2.80E-06
4.10E-06
WP_021678228.1 20636 20444 - 63NO PFAM MATCH---
WP_021678229.1 22556 20729 - 608PF00155
PF00440
Aminotran_1_2
TetR_N
Aminotransferase class I and II
Bacterial regulatory proteins, tetR family
1.30E-41
3.70E-04
WP_021678230.1 22947 23900 + 317PF13101
PF13351
PF13342
DUF3945
DUF4099
Toprim_Crpt
Protein of unknown function (DUF3945)
Protein of unknown function (DUF4099)
C-terminal repeat of topoisomerase
2.00E-26
4.40E-23
1.80E-11

Results for WP_021678226.1 [Porphyromonas gingivalis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_077110784.1 5864 7094 + 409PF03432RelaxaseRelaxase/Mobilisation nuclease domain5.40E-23
WP_077110786.1 7107 9120 + 670PF14293
PF12696
PF02534
PF10412
YWFCY
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
YWFCY protein
TraM recognition site of TraD and TraG
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
7.40E-49
3.30E-15
4.60E-14
1.30E-11
WP_004584322.1 9424 9628 + 67NO PFAM MATCH---
WP_077110790.1 10188 9813 - 124PF09357RteCRteC protein1.60E-26
WP_077110792.1 10958 10463 - 164NO PFAM MATCH---
WP_021678223.1 13167 10959 - 735PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
2.00E-33
3.70E-29
4.90E-27
4.50E-07
3.60E-04
WP_143733442.1 15028 13335 - 564PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-55
WP_081393304.1 17374 15043 - 776PF14905
PF13715
OMP_b-brl_3
CarbopepD_reg_2
Outer membrane protein beta-barrel family
CarboxypepD_reg-like domain
4.70E-35
1.70E-06
WP_021678226.1 19221 17391 - 609PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-50
WP_021678227.1 20389 19222 - 388PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-12
2.80E-06
4.10E-06
WP_021678228.1 20665 20473 - 63NO PFAM MATCH---
WP_021678229.1 22585 20758 - 608PF00155
PF00440
Aminotran_1_2
TetR_N
Aminotransferase class I and II
Bacterial regulatory proteins, tetR family
1.30E-41
3.70E-04
WP_077110797.1 22874 24269 + 464PF13101
PF13351
PF13342
DUF3945
DUF4099
Toprim_Crpt
Protein of unknown function (DUF3945)
Protein of unknown function (DUF4099)
C-terminal repeat of topoisomerase
1.50E-31
2.40E-23
6.10E-18
WP_256822008.1 24303 24866 + 188PF01751
PF01131
Toprim
Topoisom_bac
Toprim domain
DNA topoisomerase
1.40E-12
5.20E-05
WP_256822006.1 24885 26413 + 508PF01131
PF13342
Topoisom_bac
Toprim_Crpt
DNA topoisomerase
C-terminal repeat of topoisomerase
2.20E-97
3.10E-19
WP_077110799.1 26550 26982 + 143PF08989DUF1896Domain of unknown function (DUF1896)2.60E-44
WP_004362425.1 26968 29871 + 967INFERRED GENE---

Results for WP_021675898.1 [Peptostreptococcaceae bacterium oral taxon 113 str. W5053] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021675889.1 71088 70815 - 90PF012572Fe-2S_thioredxThioredoxin-like [2Fe-2S] ferredoxin5.20E-05
WP_021675890.1 71322 71937 + 204NO PFAM MATCH---
WP_021675892.1 72200 74132 + 643PF01381
PF13560
PF13424
PF12844
PF13730
HTH_3
HTH_31
TPR_12
HTH_19
HTH_36
Helix-turn-helix
Helix-turn-helix domain
Tetratricopeptide repeat
Helix-turn-helix domain
Helix-turn-helix domain
8.60E-16
1.70E-08
3.70E-06
3.80E-06
1.60E-04
WP_021675893.1 74307 74136 - 56NO PFAM MATCH---
WP_021675894.1 74468 74633 + 54NO PFAM MATCH---
WP_021675895.1 74703 77433 + 909PF14028
PF04738
Lant_dehydr_C
Lant_dehydr_N
Lantibiotic biosynthesis dehydratase C-term
Lantibiotic dehydratase, N terminus
6.50E-13
3.30E-12
WP_021675896.1 77407 78271 + 287NO PFAM MATCH---
WP_021675897.1 78246 79008 + 253NO PFAM MATCH---
WP_021675898.1 79000 80158 + 385PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.60E-29
WP_021675899.1 80175 81279 + 367NO PFAM MATCH---
WP_021675900.1 81374 82946 + 523PF00005
PF00664
PF13555
ABC_tran
ABC_membrane
AAA_29
ABC transporter
ABC transporter transmembrane region
P-loop containing region of AAA domain
1.90E-25
4.30E-10
1.40E-04
WP_081695539.1 83114 83303 + 62NO PFAM MATCH---
WP_021675902.1 83364 83835 + 156NO PFAM MATCH---
WP_021675903.1 83824 84418 + 197PF00664ABC_membraneABC transporter transmembrane region1.20E-04
WP_021675904.1 84808 85000 + 63NO PFAM MATCH---
WP_021675905.1 86004 85236 - 255PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
3.60E-11
4.10E-10
WP_021675906.1 86874 86007 - 288PF00005
PF13304
PF02463
PF01514
ABC_tran
AAA_21
SMC_N
YscJ_FliF
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Secretory protein of YscJ/FliF family
2.00E-17
5.80E-11
3.60E-09
2.80E-04

Results for WP_021177837.1 [Serratia fonticola AU-P3(3)] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021177832.1 1185 243 - 313PF01171ATP_bind_3PP-loop family7.20E-13
WP_021177833.1 1942 4408 + 821PF02687FtsXFtsX-like permease family1.10E-04
WP_021177834.1 4865 5813 + 315PF00005
PF13304
PF02463
PF13476
ABC_tran
AAA_21
SMC_N
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
3.50E-28
1.20E-11
2.90E-06
8.80E-05
WP_021177835.1 5910 7026 + 371PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.50E-20
1.40E-19
WP_021177836.1 7022 7961 + 312PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term6.30E-18
WP_021177837.1 7957 9301 + 447PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-49
WP_039995051.1 9356 10028 + 223NO PFAM MATCH---
WP_021177838.1 10066 12472 + 801PF00881NitroreductaseNitroreductase family6.40E-09
WP_152523170.1 12452 13499 + 348NO PFAM MATCH---
WP_021177840.1 13559 14546 + 328NO PFAM MATCH---
WP_021177841.1 14584 15931 + 448PF13437
PF13533
PF16576
HlyD_3
Biotin_lipoyl_2
HlyD_D23
HlyD family secretion protein
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
5.70E-12
1.40E-06
3.60E-06
WP_039995053.1 15934 16609 + 224PF00005
PF01637
ABC_tran
ATPase_2
ABC transporter
ATPase domain predominantly from Archaea
3.70E-33
8.60E-04
WP_021177842.1 16661 18980 + 772NO PFAM MATCH---
WP_021177843.1 22638 19104 - 1177PF01855
PF01558
PF10371
PF17147
PF13484
POR_N
POR
EKR
PFOR_II
Fer4_16
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
Pyruvate ferredoxin/flavodoxin oxidoreductase
Domain of unknown function
Pyruvate:ferredoxin oxidoreductase core domain II
4Fe-4S double cluster binding domain
2.40E-82
1.80E-32
4.00E-23
6.60E-15
2.40E-09

Results for WP_022526810.1 [Streptococcus anginosus T5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022526804.1 1651 2392 + 246PF00005
PF13304
PF02463
PF09818
PF13555
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
3.40E-34
9.80E-11
6.90E-10
3.70E-05
5.30E-04
WP_003025899.1 3122 2906 - 71NO PFAM MATCH---
WP_022526805.1 4119 3231 - 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
5.80E-29
3.90E-04
WP_022526806.1 5459 4340 - 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.20E-42
8.30E-21
8.70E-09
WP_003031062.1 6583 5455 - 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.70E-23
4.20E-18
3.10E-10
WP_022526807.1 7515 6591 - 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.50E-33
6.70E-14
3.50E-05
WP_022526808.1 8237 7535 - 233PF19393DUF5968Family of unknown function (DUF5968)6.80E-21
WP_022526809.1 8902 8233 - 222PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.30E-10
WP_022526810.1 10235 8876 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.80E-43
WP_022526811.1 11307 10239 - 355NO PFAM MATCH---
WP_022526812.1 12254 11306 - 315PF00881NitroreductaseNitroreductase family7.70E-14
WP_080559877.1 12545 12392 - 50NO PFAM MATCH---
WP_022524424.1 12879 12714 - 54NO PFAM MATCH---
WP_002908843.1 13293 13614 + 107INFERRED GENE---
WP_002913966.1 13613 13820 + 69INFERRED GENE---
WP_022526815.1 16078 14410 - 555PF13684
PF02734
Dak1_2
Dak2
Dihydroxyacetone kinase family
DAK2 domain
1.00E-127
2.10E-40
WP_003025907.1 16446 16080 - 121PF03780Asp23Asp23 family, cell envelope-related function1.70E-33

Results for WP_021779539.1 [Halarchaeum acidiphilum MH1-52-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021779534.1 36803 37040 + 78NO PFAM MATCH---
WP_021779535.1 37079 37463 + 127PF19137DUF5820Family of unknown function (DUF5820)2.10E-37
WP_021779536.1 37920 37434 - 161PF13671
PF13238
PF13191
PF13521
PF01583
AAA_33
AAA_18
AAA_16
AAA_28
APS_kinase
AAA domain
AAA domain
AAA ATPase domain
AAA domain
Adenylylsulphate kinase
4.90E-15
7.00E-07
5.90E-05
1.30E-04
3.70E-04
WP_020222678.1 38021 38468 + 148PF03684UPF0179Uncharacterised protein family (UPF0179)7.90E-46
WP_020222677.1 39247 38407 - 279PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family8.30E-13
WP_020222676.1 39341 39836 + 164PF03745DUF309Domain of unknown function (DUF309)2.30E-13
WP_021779538.1 40205 40991 + 261PF00459
PF00316
Inositol_P
FBPase
Inositol monophosphatase family
Fructose-1-6-bisphosphatase, N-terminal domain
1.30E-48
2.90E-04
WP_020222883.1 41194 42313 + 372PF01889DUF63Membrane protein of unknown function DUF631.30E-36
WP_021779539.1 44272 42547 - 574PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-51
WP_020222747.1 45206 44387 - 272PF19138DUF5821Family of unknown function (DUF5821)1.90E-93
WP_049933636.1 46856 45338 - 505PF12770CHATCHAT domain2.90E-05
WP_049933638.1 46889 47372 + 160NO PFAM MATCH---
WP_008309023.1 47535 48782 + 415INFERRED GENE---
WP_020222045.1 51136 49231 - 634PF10670DUF4198Domain of unknown function (DUF4198)1.40E-04
WP_267879169.1 51341 51206 - 44NO PFAM MATCH---
WP_021779542.1 51399 52632 + 410PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain3.30E-22
WP_020222688.1 52961 53855 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
2.70E-66
4.10E-36

Results for WP_021699363.1 [Pseudomonas alcaligenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021699371.1 1721408 1721687 + 92PF01475FURFerric uptake regulator family5.40E-06
WP_172491649.1 1722600 1721700 - 299PF00892EamAEamA-like transporter family2.10E-13
WP_255209906.1 1722713 1723460 + 248PF02146SIR2Sir2 family1.90E-49
WP_021699368.1 1723763 1723460 - 100NO PFAM MATCH---
WP_021699367.1 1724770 1723777 - 330PF03741TerCIntegral membrane protein TerC family4.70E-58
WP_021699366.1 1727162 1724882 - 759PF13307
PF06733
PF00270
PF06777
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase C-terminal domain
DEAD_2
DEAD/DEAH box helicase
Helical and beta-bridge domain
4.30E-35
3.00E-12
4.60E-05
3.20E-04
WP_021699365.1 1728796 1727158 - 545PF08774
PF18081
VRR_NUC
FANC_SAP
VRR-NUC domain
Fanconi anemia-associated nuclease SAP domain
8.60E-35
1.20E-13
WP_021699364.1 1729103 1728941 - 53NO PFAM MATCH---
WP_021699363.1 1729288 1731493 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.60E-75
9.20E-72
5.80E-08
WP_021699362.1 1731702 1732470 + 255NO PFAM MATCH---
WP_155948006.1 1732682 1732517 - 54NO PFAM MATCH---
WP_115288026.1 1732911 1732662 - 82NO PFAM MATCH---
WP_017244791.1 1733206 1733684 + 159INFERRED GENE---
WP_021699359.1 1734321 1733700 - 206NO PFAM MATCH---
WP_021699358.1 1735448 1734569 - 292PF00561
PF12146
PF12697
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
2.00E-08
7.60E-08
2.20E-06
WP_021699357.1 1736464 1735771 - 230PF00849
PF01479
PseudoU_synth_2
S4
RNA pseudouridylate synthase
S4 domain
3.40E-16
9.40E-05
WP_021699356.1 1736670 1736466 - 67PF14375Cys_rich_CWCCysteine-rich CWC3.10E-13

Results for WP_004445590.1 [Rhizobium pusense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_269842213.1 385254 384021 - 410PF00480
PF01047
PF13412
PF13545
ROK
MarR
HTH_24
HTH_Crp_2
ROK family
MarR family
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
1.90E-13
1.60E-05
1.10E-04
1.60E-04
WP_004445598.1 385495 386536 + 346PF13407
PF00532
PF13458
PF13377
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein
Periplasmic binding protein-like domain
5.30E-60
2.30E-07
7.60E-04
8.10E-04
WP_004445596.1 386615 387929 + 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component3.50E-26
WP_004445595.1 387947 388730 + 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
5.70E-30
4.60E-11
1.50E-06
1.20E-05
2.40E-04
WP_022562990.1 389281 388972 - 102NO PFAM MATCH---
WP_004445593.1 389737 389299 - 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
7.40E-13
4.50E-11
1.30E-07
1.50E-06
WP_004445592.1 391013 389876 - 378NO PFAM MATCH---
WP_004445591.1 391719 391002 - 238PF07812TfuATfuA-like protein1.20E-40
WP_004445590.1 392915 391715 - 399PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.20E-47
WP_004445589.1 393381 392952 - 142NO PFAM MATCH---
WP_004445588.1 395372 393389 - 660PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
2.90E-19
7.10E-04
WP_004445587.1 395504 395996 + 163NO PFAM MATCH---
WP_044459172.1 396129 396468 + 112NO PFAM MATCH---
WP_004445582.1 396868 397783 + 304PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.10E-34
WP_004445580.1 399260 397862 - 465PF00722
PF00353
PF03935
Glyco_hydro_16
HemolysinCabind
SKN1_KRE6_Sbg1
Glycosyl hydrolases family 16
RTX calcium-binding nonapeptide repeat (4 copies)
Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1
2.50E-35
9.50E-10
1.10E-07
WP_004445578.1 399532 400015 + 160PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-term2.10E-16
WP_004445576.1 401430 400044 - 461PF04932Wzy_CO-Antigen ligase4.00E-07

Results for WP_021116682.1 [Glaesserella parasuis D74] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021111568.1 830214 830886 + 223PF14622
PF00636
PF00035
Ribonucleas_3_3
Ribonuclease_3
dsrm
Ribonuclease-III-like
Ribonuclease III domain
Double-stranded RNA binding motif
1.70E-34
8.50E-23
9.00E-15
WP_021116679.1 830945 831848 + 300PF01926
PF07650
PF02421
PF00009
PF04548
MMR_HSR1
KH_2
FeoB_N
GTP_EFTU
AIG1
50S ribosome-binding GTPase
KH domain
Ferrous iron transport protein B
Elongation factor Tu GTP binding domain
AIG1 family
1.40E-23
8.40E-20
1.10E-14
6.50E-09
2.00E-08
WP_021116680.1 831847 832567 + 239PF11967
PF02565
RecO_N
RecO_C
Recombination protein O N terminal
Recombination protein O C terminal
3.30E-25
8.70E-21
WP_021111571.1 833661 832587 - 357PF00561Abhydrolase_1alpha/beta hydrolase fold5.80E-45
WP_043895641.1 835392 833847 - 514PF00884SulfataseSulfatase3.20E-26
WP_021111573.1 835532 836246 + 237PF00696AA_kinaseAmino acid kinase family1.10E-27
WP_005711228.1 836886 836307 - 192PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
2.70E-29
1.30E-09
WP_021111574.1 837015 837573 + 185PF01765RRFRibosome recycling factor8.60E-64
WP_021116682.1 837717 839463 + 581PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-77
5.50E-62
WP_204248510.1 840211 839608 - 200PF00872Transposase_mutTransposase, Mutator family7.10E-05
WP_021116717.1 842069 840755 - 437PF00860Xan_ur_permeasePermease family1.80E-85
WP_021116718.1 843275 842234 - 346PF01594AI-2E_transportAI-2E family transporter4.10E-64
WP_021114266.1 844337 843347 - 329PF02774Semialdhyde_dhCSemialdehyde dehydrogenase, dimerisation domain3.20E-11
WP_021116719.1 844947 844479 - 155PF04186FxsAFxsA cytoplasmic membrane protein2.70E-29
WP_021116720.1 845339 846998 + 552PF02776
PF02775
PF00205
PF01855
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
POR_N
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
3.80E-55
4.70E-46
6.20E-45
1.30E-05
WP_021116721.1 847009 847228 + 72PF13710
PF13291
ACT_5
ACT_4
ACT domain
ACT domain
6.80E-21
1.10E-04
WP_021111582.1 847247 847838 + 196NO PFAM MATCH---

Results for WP_023370892.1 [Mycobacterium kansasii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007167812.1 1933882 1934257 + 124PF00164Ribosom_S12_S23Ribosomal protein S12/S232.50E-42
WP_023370878.1 1934256 1934727 + 156PF00177Ribosomal_S7Ribosomal protein S7p/S5e6.30E-62
WP_023370880.1 1934802 1936908 + 701PF00009
PF03764
PF14492
PF00679
PF03144
GTP_EFTU
EFG_IV
EFG_III
EFG_C
GTP_EFTU_D2
Elongation factor Tu GTP binding domain
Elongation factor G, domain IV
Elongation Factor G, domain III
Elongation factor G C-terminus
Elongation factor Tu domain 2
8.60E-69
3.00E-46
4.00E-34
1.90E-30
6.60E-14
WP_023370882.1 1937009 1938200 + 396PF00009
PF03143
PF03144
PF01926
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Elongation factor Tu GTP binding domain
Elongation factor Tu C-terminal domain
Elongation factor Tu domain 2
50S ribosome-binding GTPase
5.60E-57
2.70E-38
3.80E-17
1.30E-05
WP_023370884.1 1938361 1939162 + 266PF09851SHOCTShort C-terminal domain2.50E-05
WP_174893697.1 1939427 1940252 + 274PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
1.20E-48
3.10E-47
1.50E-14
WP_225722948.1 1940351 1941524 + 390PF07992
PF00070
PF14759
PF13450
PF13738
Pyr_redox_2
Pyr_redox
Reductase_C
NAD_binding_8
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
2.10E-56
3.20E-19
9.10E-13
1.10E-04
1.30E-04
WP_023370890.1 1942496 1941527 - 322PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann fold1.30E-12
WP_023370892.1 1943799 1942551 - 415PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-57
WP_023370896.1 1945543 1944484 - 352PF10094DUF2332Uncharacterized protein conserved in bacteria (DUF2332)1.00E-113
WP_023370898.1 1946133 1945539 - 197PF17754
PF00440
TetR_C_14
TetR_N
MftR C-terminal domain
Bacterial regulatory proteins, tetR family
1.10E-39
3.70E-13
WP_036395329.1 1946233 1946323 + 29NO PFAM MATCH---
WP_036395330.1 1946359 1946668 + 102NO PFAM MATCH---
WP_023370904.1 1946664 1947849 + 394PF04055
PF13186
PF13353
Radical_SAM
SPASM
Fer4_12
Radical SAM superfamily
Iron-sulfur cluster-binding domain
4Fe-4S single cluster domain
3.60E-23
6.70E-04
7.30E-04
WP_023370906.1 1947851 1949024 + 390PF01070
PF00478
PF01645
FMN_dh
IMPDH
Glu_synthase
FMN-dependent dehydrogenase
IMP dehydrogenase / GMP reductase domain
Conserved region in glutamate synthase
9.40E-109
4.60E-07
3.00E-05
WP_036395289.1 1949091 1949841 + 249PF02633CreatininaseCreatinine amidohydrolase1.00E-58
WP_023370910.1 1949837 1951259 + 473PF00535
PF10111
PF13641
PF13632
PF13506
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
6.50E-23
6.20E-13
1.10E-11
6.90E-11
7.30E-09

Results for WP_023371274.1 back to top

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Couldn't process WP_023371274.1 Genbank filestream. May be corrupt.

Results for WP_023373808.1 back to top

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Couldn't process WP_023373808.1 Genbank filestream. May be corrupt.

Results for WP_023992696.1 [Methanobacterium sp. MB1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023992688.1 1553189 1551560 - 542PF00437T2SSEType II/IV secretion system protein1.80E-58
WP_023992689.1 1553307 1554288 + 326PF06325PrmARibosomal protein L11 methyltransferase (PrmA)9.90E-06
WP_023992690.1 1555592 1554344 - 415PF01970TctATripartite tricarboxylate transporter TctA family1.00E-69
WP_023992691.1 1556143 1555873 - 89PF00736EF1_GNEEF-1 guanine nucleotide exchange domain1.00E-22
WP_023992692.1 1556500 1556338 - 53PF07754HVO_2753_ZBPSmall zinc finger protein HVO_2753-like, Zn-binding pocket1.20E-13
WP_023992693.1 1557145 1556500 - 214PF00696AA_kinaseAmino acid kinase family5.90E-18
WP_023992694.1 1557556 1557214 - 113PF01981PTH2Peptidyl-tRNA hydrolase PTH22.30E-39
WP_023992695.1 1558395 1557858 - 178PF01789
PF18933
PsbP
PsbP_2
PsbP
PsbP-like protein
5.10E-21
1.10E-13
WP_023992696.1 1559773 1558576 - 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.10E-98
WP_039377408.1 1560419 1559822 - 198PF02163Peptidase_M50Peptidase family M502.00E-08
WP_023992698.1 1560734 1561208 + 157PF01230HITHIT domain8.20E-06
WP_023992699.1 1561259 1562267 + 335PF00557
PF01321
PF16189
Peptidase_M24
Creatinase_N
Creatinase_N_2
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
Creatinase/Prolidase N-terminal domain
2.10E-54
3.60E-15
1.80E-04
WP_023992700.1 1562434 1563370 + 311PF00482T2SSFType II secretion system (T2SS), protein F9.30E-23
WP_023992701.1 1563382 1563598 + 71PF04021Class_IIIsignalClass III signal peptide7.20E-04
WP_023992702.1 1563675 1565082 + 468PF00171
PF05893
Aldedh
LuxC
Aldehyde dehydrogenase family
Acyl-CoA reductase (LuxC)
9.50E-164
9.90E-06
WP_023992703.1 1565943 1565220 - 240PF18489
PF01588
Alpha_Helical
tRNA_bind
Alpha helical domain
Putative tRNA binding domain
3.80E-57
1.50E-17
WP_039376842.1 1566295 1566625 + 109PF05239PRCPRC-barrel domain9.70E-11

Results for WP_023190668.1 [Lactobacillus helveticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023190665.1 1943573 1943093 - 159NO PFAM MATCH---
WP_012212366.1 1944033 1943670 - 120NO PFAM MATCH---
WP_012212367.1 1945400 1944101 - 432PF00206
PF10397
Lyase_1
ADSL_C
Lyase
Adenylosuccinate lyase C-terminus
6.30E-66
2.00E-20
WP_012212368.1 1946693 1945403 - 429PF00709Adenylsucc_syntAdenylosuccinate synthetase1.50E-177
WP_023190666.1 1946903 1947896 + 330PF00478
PF01070
PF03060
PF00977
PF04309
IMPDH
FMN_dh
NMO
His_biosynth
G3P_antiterm
IMP dehydrogenase / GMP reductase domain
FMN-dependent dehydrogenase
Nitronate monooxygenase
Histidine biosynthesis protein
Glycerol-3-phosphate responsive antiterminator
5.70E-68
6.50E-06
8.50E-06
8.30E-05
2.40E-04
WP_250366053.1 1949327 1948334 - 330PF19200
PF05913
MupG_N
MupG_C
6-phospho-N-acetylmuramidase, N-terminal
6-phospho-N-acetylmuramidase, C-terminal
5.30E-69
2.80E-28
WP_012211358.1 1949494 1950673 + 392PF00872
PF10551
PF01610
Transposase_mut
MULE
DDE_Tnp_ISL3
Transposase, Mutator family
MULE transposase domain
Transposase
3.00E-109
2.90E-09
1.90E-04
WP_065866741.1 1951216 1952230 + 337PF03590
PF00152
AsnA
tRNA-synt_2
Aspartate-ammonia ligase
tRNA synthetases class II (D, K and N)
1.10E-100
4.50E-06
WP_023190668.1 1953770 1952693 - 358PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-08
WP_014919595.1 1954770 1953774 - 331PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-06
WP_014919596.1 1955578 1954771 - 268NO PFAM MATCH---
WP_035513634.1 1955947 1955578 - 122NO PFAM MATCH---
WP_012211358.1 1956120 1957299 + 392PF00872
PF10551
PF01610
Transposase_mut
MULE
DDE_Tnp_ISL3
Transposase, Mutator family
MULE transposase domain
Transposase
3.00E-109
2.90E-09
1.90E-04
WP_023190659.1 1957626 1957320 - 101NO PFAM MATCH---
WP_014919599.1 1958335 1957618 - 238PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
6.80E-15
6.80E-15
5.50E-09
1.60E-04
2.20E-04
WP_023190658.1 1959063 1958331 - 243NO PFAM MATCH---
WP_020828930.1 1959390 1959117 - 90NO PFAM MATCH---

Results for WP_022988632.1 [Marinobacter sp. ES-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022988624.1 18641 19721 + 359PF00676
PF13292
PF02775
E1_dh
DXP_synthase_N
TPP_enzyme_C
Dehydrogenase E1 component
1-deoxy-D-xylulose-5-phosphate synthase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
1.90E-70
7.50E-07
2.70E-06
WP_022988625.1 19717 20722 + 334PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
6.00E-49
4.10E-39
WP_022988626.1 20732 21857 + 374PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.00E-52
1.70E-19
4.60E-11
3.00E-05
WP_227498296.1 21938 22484 + 181PF04314PCuACCopper chaperone PCu(A)C5.30E-36
WP_022988628.1 23260 22516 - 247PF13649
PF13847
PF08241
PF13489
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.40E-12
1.20E-11
3.00E-10
1.50E-07
1.90E-07
WP_022988629.1 23563 23941 + 125PF12680
PF14534
SnoaL_2
DUF4440
SnoaL-like domain
Domain of unknown function (DUF4440)
1.50E-05
4.50E-04
WP_036219303.1 24767 24011 - 251PF07589PEP-CTERMPEP-CTERM motif2.00E-08
WP_022988631.1 25085 25979 + 297PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
2.30E-20
4.20E-19
WP_022988632.1 28168 25975 - 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-78
1.40E-68
7.20E-09
WP_022988633.1 28192 28420 + 75NO PFAM MATCH---
WP_022988634.1 29250 28416 - 277PF06167Peptidase_M90Glucose-regulated metallo-peptidase M901.70E-85
WP_022988635.1 30237 29262 - 324PF12706
PF00753
PF13691
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
tRNase Z endonuclease
2.90E-14
1.00E-11
6.60E-04
WP_022988636.1 30308 31163 + 284PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.10E-38
1.20E-22
WP_022988637.1 31190 31760 + 189PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.10E-17
WP_022988638.1 31826 32432 + 201PF01810LysELysE type translocator6.00E-40
WP_022988639.1 33485 32405 - 359PF07859
PF20434
PF10340
Abhydrolase_3
BD-FAE
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Steryl acetyl hydrolase
5.10E-43
1.70E-13
6.20E-06
WP_022988640.1 34515 33669 - 281PF19657DUF6160Family of unknown function (DUF6160)2.60E-55

Results for WP_023006715.1 [Halomonas sp. PBN3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023006715.1 201 2412 + 736PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
5.80E-71
1.40E-08
WP_023006716.1 2686 3751 + 354PF13437
PF13533
PF16576
HlyD_3
Biotin_lipoyl_2
HlyD_D23
HlyD family secretion protein
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
1.40E-09
1.50E-09
7.00E-07
WP_023006717.1 3747 6789 + 1013PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
1.40E-149
2.40E-04
WP_023006718.1 6838 8731 + 630PF00005
PF00664
PF02463
PF01926
PF00004
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
AAA
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
ATPase family associated with various cellular activities (AAA)
1.80E-34
6.70E-12
4.00E-06
4.60E-05
1.30E-04
WP_052004270.1 9196 8725 - 156PF00582UspUniversal stress protein family2.50E-13
WP_031218443.1 10787 9167 - 539PF02028BCCTBCCT, betaine/carnitine/choline family transporter4.50E-181
WP_023006721.1 11007 11463 + 151PF04073tRNA_editAminoacyl-tRNA editing domain8.50E-21
WP_023006722.1 11629 12313 + 227PF03352Adenine_glycoMethyladenine glycosylase5.00E-13
WP_023006723.1 12417 12987 + 189PF03848
PF13649
PF13489
PF08241
PF05401
TehB
Methyltransf_25
Methyltransf_23
Methyltransf_11
NodS
Tellurite resistance protein TehB
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Nodulation protein S (NodS)
4.30E-67
7.40E-11
9.70E-10
3.90E-08
2.40E-05

Results for WP_023013308.1 [Acinetobacter sp. COS3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023013300.1 19250 20852 + 533PF01039Carboxyl_transCarboxyl transferase domain1.20E-154
WP_023013301.1 20861 21656 + 264PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.90E-53
9.40E-34
WP_023013302.1 21677 23669 + 663PF02786
PF00289
PF02785
PF00364
PF07478
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
D-ala D-ala ligase C-terminus
5.20E-75
1.20E-44
1.20E-37
7.80E-15
2.20E-11
WP_023013303.1 23665 24568 + 300PF00682HMGL-likeHMGL-like2.90E-54
WP_023013304.1 25603 24664 - 312PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.80E-34
1.10E-15
WP_023013305.1 25805 29276 + 1156PF20169
PF01558
PF02775
DUF6537
POR
TPP_enzyme_C
Family of unknown function (DUF6537)
Pyruvate ferredoxin/flavodoxin oxidoreductase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
2.50E-49
3.50E-25
9.40E-06
WP_004653525.1 29608 29800 + 64INFERRED GENE---
WP_023013307.1 30757 29962 - 264PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.00E-50
1.20E-37
8.90E-09
WP_023013308.1 33188 30986 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.30E-73
4.70E-73
2.10E-08
WP_023013309.1 34027 33469 - 185PF08212
PF00061
Lipocalin_2
Lipocalin
Lipocalin-like domain
Lipocalin / cytosolic fatty-acid binding protein family
2.50E-48
6.50E-05
WP_023013310.1 35689 34207 - 493PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
1.60E-116
1.10E-39
WP_023013311.1 36835 35860 - 324PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family4.80E-56
WP_023013312.1 38209 36868 - 446PF04996AstBSuccinylarginine dihydrolase4.00E-217
WP_023013313.1 39697 38227 - 489PF00171AldedhAldehyde dehydrogenase family4.60E-119
WP_023013314.1 40740 39696 - 347PF04958AstAArginine N-succinyltransferase beta subunit1.50E-136
WP_004879612.1 41967 40761 - 401PF00202
PF00155
Aminotran_3
Aminotran_1_2
Aminotransferase class-III
Aminotransferase class I and II
3.70E-123
2.70E-04
WP_026094104.1 43316 42041 - 424PF00208
PF02812
ELFV_dehydrog
ELFV_dehydrog_N
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
6.30E-73
1.60E-55

Results for WP_023010847.1 [Marinobacter sp. EN3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022992936.1 13521 13044 - 158PF14539DUF4442Domain of unknown function (DUF4442)4.80E-22
WP_022992937.1 14223 13641 - 193PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.10E-18
WP_023010844.1 15081 14226 - 284PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.10E-38
1.40E-22
WP_022992938.1 15152 16124 + 323PF12706
PF00753
PF13691
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
tRNase Z endonuclease
6.60E-13
7.00E-12
3.70E-05
WP_022992939.1 16448 16124 - 107PF03992ABMAntibiotic biosynthesis monooxygenase9.00E-08
WP_023010845.1 16533 16953 + 139PF00582UspUniversal stress protein family5.40E-14
WP_023010846.1 16995 17829 + 277PF06167Peptidase_M90Glucose-regulated metallo-peptidase M903.10E-85
WP_023007969.1 18066 17832 - 77NO PFAM MATCH---
WP_023010847.1 18090 20283 + 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-78
3.20E-68
6.40E-09
WP_014420826.1 21173 20279 - 297PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
4.40E-18
1.60E-17
WP_014420825.1 21255 21534 + 92PF10262RdxRdx family1.90E-30
WP_011785650.1 21675 22419 + 247PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.00E-12
2.00E-10
5.20E-10
4.40E-07
5.60E-06
WP_022992942.1 22955 22451 - 167PF04314PCuACCopper chaperone PCu(A)C1.90E-35
WP_022992943.1 25328 23021 - 768PF00563
PF00990
PF02743
EAL
GGDEF
dCache_1
EAL domain
Diguanylate cyclase, GGDEF domain
Cache domain
3.30E-70
8.90E-37
3.60E-04
WP_023010848.1 25564 26284 + 239PF04391
PF05099
DUF533
TerB
Protein of unknown function (DUF533)
Tellurite resistance protein TerB
4.30E-59
8.30E-04
WP_023010849.1 26668 26329 - 112PF03831
PF08274
PF08271
YjdM
YjdM_Zn_Ribbon
TF_Zn_Ribbon
PhnA domain
PhnA Zinc-Ribbon
TFIIB zinc-binding
3.00E-34
1.70E-15
1.50E-04
WP_031211153.1 27275 26708 - 188PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)2.70E-08

Results for WP_023044847.1 [Photorhabdus temperata J3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023044846.1 1113 372 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.90E-32
3.30E-18
4.70E-06
WP_021325200.1 3470 1187 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.20E-206
4.00E-43
WP_021325199.1 4382 3524 - 285PF01226Form_Nir_transFormate/nitrite transporter3.70E-74
WP_023044847.1 6471 4707 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.10E-82
1.40E-67
WP_023044848.1 6610 7654 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.10E-58
2.20E-25
WP_021325196.1 7812 8088 + 91PF08681
PF05534
DUF1778
HicB
Protein of unknown function (DUF1778)
HicB family
8.00E-28
7.10E-04
WP_021325195.1 8093 8588 + 164PF13673
PF13508
PF00583
PF08445
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
FR47-like protein
3.20E-10
3.60E-10
8.30E-10
1.10E-05
WP_023044851.1 8753 9842 + 362PF00266Aminotran_5Aminotransferase class-V7.70E-62
WP_021325192.1 9968 11255 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.90E-148
WP_023044852.1 11436 12129 + 230PF02224
PF13189
PF13671
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
3.00E-80
9.70E-07
2.30E-06
3.50E-05
7.70E-05
WP_023044853.1 12301 13975 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.60E-98
2.90E-10
6.60E-06
WP_021325190.1 14045 14330 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.10E-29
3.50E-08

Results for WP_022992941.1 [Marinobacter sp. C1S70] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022992936.1 13092 12615 - 158PF14539DUF4442Domain of unknown function (DUF4442)4.80E-22
WP_022992937.1 13794 13212 - 193PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.10E-18
WP_011785638.1 14652 13797 - 284PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.50E-39
8.20E-23
WP_022992938.1 14723 15695 + 323PF12706
PF00753
PF13691
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
tRNase Z endonuclease
6.60E-13
7.00E-12
3.70E-05
WP_022992939.1 16019 15695 - 107PF03992ABMAntibiotic biosynthesis monooxygenase9.00E-08
WP_011785641.1 16104 16524 + 139PF00582UspUniversal stress protein family3.60E-14
WP_022992940.1 16566 17400 + 277PF06167Peptidase_M90Glucose-regulated metallo-peptidase M901.40E-85
WP_011785643.1 17637 17403 - 77NO PFAM MATCH---
WP_022992941.1 17661 19848 + 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-78
3.20E-68
6.40E-09
WP_011785645.1 20238 19884 - 117PF07237DUF1428Protein of unknown function (DUF1428)1.10E-46
WP_011785646.1 20613 20253 - 119PF03795YCIIYCII-related domain1.80E-20
WP_011785647.1 21942 20709 - 410PF20239
PF04542
PF08281
PF07719
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
Family of unknown function (DUF6596)
Sigma-70 region 2
Sigma-70, region 4
Tetratricopeptide repeat
1.20E-35
4.90E-09
7.70E-08
3.60E-04
WP_011785648.1 22822 21928 - 297PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
8.70E-18
4.10E-17
WP_011785649.1 22904 23183 + 92PF10262RdxRdx family2.80E-30
WP_011785650.1 23324 24068 + 247PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.00E-12
2.00E-10
5.20E-10
4.40E-07
5.60E-06
WP_022992942.1 24604 24100 - 167PF04314PCuACCopper chaperone PCu(A)C1.90E-35
WP_022992943.1 26977 24670 - 768PF00563
PF00990
PF02743
EAL
GGDEF
dCache_1
EAL domain
Diguanylate cyclase, GGDEF domain
Cache domain
3.30E-70
8.90E-37
3.60E-04

Results for WP_023007968.1 [Marinobacter sp. EVN1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_227501169.1 81652 82195 + 180PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.00E-08
WP_023007963.1 82235 82574 + 112PF03831
PF08274
PF08271
YjdM
YjdM_Zn_Ribbon
TF_Zn_Ribbon
PhnA domain
PhnA Zinc-Ribbon
TFIIB zinc-binding
8.40E-35
1.70E-15
1.70E-04
WP_014420820.1 83339 82619 - 239PF04391
PF05099
DUF533
TerB
Protein of unknown function (DUF533)
Tellurite resistance protein TerB
4.10E-59
8.20E-04
WP_023007964.1 83575 85882 + 768PF00563
PF00990
PF02743
EAL
GGDEF
dCache_1
EAL domain
Diguanylate cyclase, GGDEF domain
Cache domain
7.10E-70
8.20E-37
2.10E-04
WP_023007965.1 85948 86452 + 167PF04314PCuACCopper chaperone PCu(A)C6.10E-36
WP_023007966.1 87228 86484 - 247PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.90E-13
2.20E-12
9.80E-12
1.00E-07
6.10E-07
WP_014420825.1 87647 87368 - 92PF10262RdxRdx family1.90E-30
WP_023007967.1 87729 88623 + 297PF19279
PF00781
YegS_C
DAGK_cat
YegS C-terminal NAD kinase beta sandwich-like domain
Diacylglycerol kinase catalytic domain
5.10E-18
2.20E-17
WP_023007968.1 90812 88619 - 730PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-79
1.60E-68
4.80E-09
WP_023007969.1 90836 91070 + 77NO PFAM MATCH---
WP_014420829.1 91907 91073 - 277PF06167Peptidase_M90Glucose-regulated metallo-peptidase M909.50E-86
WP_011785641.1 92369 91949 - 139PF00582UspUniversal stress protein family3.60E-14
WP_023007970.1 92454 92778 + 107PF03992ABMAntibiotic biosynthesis monooxygenase2.60E-07
WP_023007971.1 93750 92778 - 323PF12706
PF00753
PF13691
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
tRNase Z endonuclease
2.90E-11
1.20E-10
1.70E-04
WP_011785638.1 93821 94676 + 284PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.50E-39
8.20E-23
WP_023007972.1 94679 95261 + 193PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.10E-18
WP_022992936.1 95381 95858 + 158PF14539DUF4442Domain of unknown function (DUF4442)4.80E-22

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Any response failure from Entrez database (error on database side)

Results for WP_023154898.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705681.1 185410 183145 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-51
3.80E-19
6.80E-05
WP_000167336.1 185901 185616 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 187734 186060 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 188528 187844 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001295345.1 189465 188700 - 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000445238.1 190917 189633 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.80E-150
WP_000057154.1 192076 190987 - 362PF00266Aminotran_5Aminotransferase class-V4.00E-76
WP_000642852.1 192967 192274 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_023154898.1 193096 194857 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.40E-83
6.30E-67
WP_000642546.1 195262 196120 + 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001292812.1 196174 198457 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000468308.1 198994 198775 - 72PF04606Ogr_DeltaOgr/Delta-like zinc finger2.10E-21
WP_016157990.1 199075 199773 + 232INFERRED GENE---

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Any response failure from Entrez database (error on database side)

Results for WP_004150842.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001361418.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534644.1 28916 29780 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.50E-123
WP_000165876.1 30442 29815 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000109295.1 30756 31905 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_000918513.1 32114 33545 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
5.20E-28
1.20E-12
NP_415420.1 33545 33656 + 37INFERRED GENE---
WP_000111039.1 34495 33754 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.70E-32
1.60E-18
2.40E-06
WP_001292812.1 36969 34686 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000642546.1 37881 37023 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001361418.1 40047 38286 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.20E-83
2.00E-66
WP_000642852.1 40176 40869 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 41067 42156 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445250.1 42226 43510 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.50E-151

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Any response failure from Entrez database (error on database side)

Results for WP_023146779.1 [Escherichia coli 908525] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000445250.1 1375 91 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.50E-151
WP_000057149.1 2534 1445 - 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000642852.1 3425 2732 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_023146779.1 3554 5315 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.30E-83
1.00E-65
WP_000642546.1 5720 6578 + 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_023146780.1 6632 8832 + 733PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.50E-208
4.80E-37
NP_415423.1 8842 8958 + 38INFERRED GENE---
WP_000111039.1 9149 9890 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.70E-32
1.60E-18
2.40E-06
NP_415420.1 9988 10099 + 37INFERRED GENE---
WP_000918513.1 11530 10099 - 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
5.20E-28
1.20E-12
WP_000109295.1 12888 11739 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_000165876.1 13202 13829 + 208PF00857IsochorismataseIsochorismatase family6.30E-22

Results for WP_001328457.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023152444.1 [Eubacterium brachy ATCC 33089] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023152435.1 41449 45037 + 1195PF07733
PF17657
PF02811
PF14579
PF01336
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Bacterial DNA polymerase III alpha NTPase domain
Bacterial DNA polymerase III alpha subunit finger domain
PHP domain
Helix-hairpin-helix motif
OB-fold nucleic acid binding domain
1.10E-110
5.60E-63
9.90E-56
5.30E-26
1.00E-09
WP_023152436.1 45113 46346 + 410PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
1.40E-34
8.60E-13
WP_023152437.1 46335 47175 + 279NO PFAM MATCH---
WP_023152438.1 48673 47386 - 428PF00817
PF11799
PF11798
IMS
IMS_C
IMS_HHH
impB/mucB/samB family
impB/mucB/samB family C-terminal domain
IMS family HHH motif
2.70E-40
9.00E-18
2.60E-05
WP_023152439.1 50064 48954 - 369PF02073Peptidase_M29Thermophilic metalloprotease (M29)1.40E-55
WP_023152440.1 50216 51236 + 339PF00781
PF19279
DAGK_cat
YegS_C
Diacylglycerol kinase catalytic domain
YegS C-terminal NAD kinase beta sandwich-like domain
1.60E-23
9.50E-16
WP_023152441.1 51306 51525 + 72PF12650DUF3784Domain of unknown function (DUF3784)6.20E-09
WP_023152443.1 52271 53981 + 569PF04055Radical_SAMRadical SAM superfamily1.00E-04
WP_023152444.1 53989 56221 + 743PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-56
WP_168854915.1 56269 58015 + 581PF00005
PF00664
PF02463
PF03193
PF07728
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_5
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
RsgA GTPase
AAA domain (dynein-related subfamily)
5.30E-31
3.00E-18
6.30E-08
1.90E-04
2.30E-04
WP_023152446.1 58004 59768 + 587PF00005
PF00664
PF02463
PF03193
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
RsgA GTPase
2.60E-31
9.00E-21
3.70E-06
3.40E-05
WP_040467500.1 59760 60792 + 343PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
4.90E-86
3.60E-05
WP_023152448.1 60798 61563 + 254PF00005
PF02463
PF13304
PF13175
PF13479
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_24
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
1.10E-28
1.40E-10
7.00E-08
7.20E-05
4.10E-04
WP_023152449.1 61657 62629 + 323PF01497
PF07355
Peripla_BP_2
GRDB
Periplasmic binding protein
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
7.30E-26
2.90E-04
WP_023152450.1 62640 63444 + 267PF08241
PF13649
PF13489
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.90E-16
9.30E-14
8.60E-13
2.40E-08
2.60E-08
WP_005998761.1 63851 64312 + 153INFERRED GENE---
WP_040467501.1 64555 65278 + 240PF14025DUF4241Protein of unknown function (DUF4241)9.60E-60

Results for WP_023268620.1 [Shewanella decolorationis S12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037414382.1 454928 455354 + 141PF00571CBSCBS domain6.00E-24
WP_023268613.1 455433 456039 + 201PF14096DUF4274Domain of unknown function (DUF4274)5.40E-15
WP_023268614.1 457432 456070 - 453PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
8.70E-47
6.70E-06
WP_023268615.1 457759 458674 + 304PF07859
PF20434
PF00135
PF10340
Abhydrolase_3
BD-FAE
COesterase
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
Steryl acetyl hydrolase
7.10E-66
5.30E-19
2.40E-13
8.10E-11
WP_023268616.1 459250 458767 - 160PF06172Cupin_5Cupin superfamily (DUF985)1.00E-43
WP_023268617.1 459392 461561 + 722PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
7.60E-34
1.20E-17
WP_023268618.1 461560 462022 + 153PF13728
PF08534
PF13905
TraF
Redoxin
Thioredoxin_8
F plasmid transfer operon protein
Redoxin
Thioredoxin-like
4.80E-06
5.80E-05
7.20E-05
WP_023268619.1 462398 463307 + 302PF00990GGDEFDiguanylate cyclase, GGDEF domain5.20E-42
WP_023268620.1 465578 463391 - 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.00E-72
4.50E-71
3.90E-09
WP_023268621.1 466031 465791 - 79NO PFAM MATCH---
WP_023268622.1 466523 466133 - 129PF12614RRF_GIRibosome recycling factor1.40E-59
WP_023268623.1 467622 466728 - 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.70E-35
9.50E-17
WP_039978724.1 467721 468342 + 206PF13561
PF00106
PF01370
PF08659
PF04321
adh_short_C2
adh_short
Epimerase
KR
RmlD_sub_bind
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
RmlD substrate binding domain
2.60E-14
5.90E-12
8.60E-07
4.10E-06
5.80E-06
WP_023268625.1 468426 468672 + 81PF11730DUF3297Protein of unknown function (DUF3297)3.60E-33
WP_023268626.1 469033 469954 + 306PF08378NERDNuclease-related domain2.20E-15
WP_023268627.1 469997 471125 + 375NO PFAM MATCH---
WP_023268628.1 471121 471586 + 154PF20131MC3ABC-three component (ABC-3C) system Middle Component 31.70E-44

Results for WP_023184363.1 [Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023184356.1 388101 387474 - 208PF00857IsochorismataseIsochorismatase family4.90E-22
WP_023184357.1 388412 389561 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.60E-25
5.00E-09
3.40E-07
2.20E-04
WP_023184358.1 389778 391200 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
9.60E-29
6.60E-14
WP_023184359.1 392230 391432 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.10E-06
NP_459946.1 392347 392659 + 104INFERRED GENE---
WP_023184360.1 392812 393772 + 319PF11047SopDSalmonella outer protein D1.30E-182
WP_023184361.1 396130 393847 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-208
4.80E-44
WP_023184362.1 397045 396187 - 285PF01226Form_Nir_transFormate/nitrite transporter7.20E-75
WP_023184363.1 399210 397449 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-82
2.40E-64
WP_023184364.1 399345 400038 + 230PF04239DUF421Protein of unknown function (DUF421)1.60E-15
WP_023184365.1 400223 401312 + 362PF00266Aminotran_5Aminotransferase class-V2.60E-69
WP_023184366.1 401382 402666 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-150
WP_023184367.1 402809 403571 + 253PF01435Peptidase_M48Peptidase family M484.20E-26
WP_023184368.1 403743 404427 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.00E-85
1.50E-07
2.10E-04
7.10E-04
9.90E-04
WP_000140319.1 404540 406214 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167332.1 406369 406654 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023184369.1 406882 409147 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.90E-51
1.40E-14
1.60E-07

Results for WP_023273654.1 [Acinetobacter nectaris CIP 110549] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_155756761.1 19388 19778 + 129NO PFAM MATCH---
WP_023273647.1 19819 21736 + 638PF07732
PF07731
PF00394
PF13473
Cu-oxidase_3
Cu-oxidase_2
Cu-oxidase
Cupredoxin_1
Multicopper oxidase
Multicopper oxidase
Multicopper oxidase
Cupredoxin-like domain
7.60E-46
5.40E-33
7.40E-33
5.20E-04
WP_023273648.1 21722 22469 + 248PF05275CopBCopper resistance protein B precursor (CopB)4.00E-48
WP_023273649.1 22522 23017 + 164PF01035
PF02870
DNA_binding_1
Methyltransf_1N
6-O-methylguanine DNA methyltransferase, DNA binding domain
6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
1.30E-28
2.50E-06
WP_023273650.1 23050 23683 + 210PF08378NERDNuclease-related domain5.90E-29
WP_023273651.1 24480 23712 - 255PF08543
PF00294
Phos_pyr_kin
PfkB
Phosphomethylpyrimidine kinase
pfkB family carbohydrate kinase
8.50E-68
1.20E-07
WP_023273652.1 24571 25222 + 216PF13419
PF00702
PF12710
PF13242
PF08282
HAD_2
Hydrolase
HAD
Hydrolase_like
Hydrolase_3
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
haloacid dehalogenase-like hydrolase
2.40E-28
3.90E-16
7.80E-11
2.50E-09
4.20E-07
WP_023273653.1 26125 25216 - 302PF00892
PF07690
EamA
MFS_1
EamA-like transporter family
Major Facilitator Superfamily
1.30E-28
2.00E-04
WP_023273654.1 28454 26240 - 737PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.90E-74
6.40E-74
1.30E-08
WP_023273655.1 29816 28982 - 277PF00149
PF12850
PF14582
Metallophos
Metallophos_2
Metallophos_3
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase superfamily domain
Metallophosphoesterase, calcineurin superfamily
1.30E-20
1.10E-09
1.30E-04
WP_023273656.1 30802 29833 - 322PF00005
PF08402
PF13304
PF03215
PF02463
ABC_tran
TOBE_2
AAA_21
Rad17
SMC_N
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
Rad17 P-loop domain
RecF/RecN/SMC N terminal domain
9.20E-35
3.30E-09
2.00E-07
4.40E-04
7.20E-04
WP_023273657.1 31617 30798 - 272PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.90E-13
WP_023273658.1 32444 31598 - 281PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.20E-18
WP_023273659.1 33445 32443 - 333PF13343
PF13531
PF01547
SBP_bac_6
SBP_bac_11
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
2.00E-47
3.00E-15
2.00E-09
WP_023273660.1 34482 33465 - 338PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
1.00E-27
2.10E-24
3.40E-20
1.30E-11
WP_023273661.1 34822 36823 + 666PF14883
PF01522
GHL13
Polysacc_deac_1
Hypothetical glycosyl hydrolase family 13
Polysaccharide deacetylase
3.80E-145
4.30E-29
WP_023273662.1 37002 37350 + 115PF13473Cupredoxin_1Cupredoxin-like domain2.90E-22

Results for WP_023398049.1 [Pseudoalteromonas luteoviolacea NCIMB 1944] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023398058.1 182226 179922 - 767PF00930
PF00326
PF12146
PF01738
PF00756
DPPIV_N
Peptidase_S9
Hydrolase_4
DLH
Esterase
Dipeptidyl peptidase IV (DPP IV) N-terminal region
Prolyl oligopeptidase family
Serine aminopeptidase, S33
Dienelactone hydrolase family
Putative esterase
2.80E-46
1.20E-40
1.60E-07
1.80E-05
4.70E-05
WP_023398057.1 182776 183262 + 161NO PFAM MATCH---
WP_023398056.1 183374 183857 + 160PF09832DUF2059Uncharacterized protein conserved in bacteria (DUF2059)1.60E-07
WP_023398055.1 184160 184793 + 210PF08695Coa1Cytochrome oxidase complex assembly protein 11.70E-07
WP_023398054.1 184896 185241 + 114PF00072Response_regResponse regulator receiver domain4.30E-10
WP_023398053.1 185350 185731 + 126PF12773DZRDouble zinc ribbon4.10E-05
WP_023398052.1 185847 186405 + 185PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily1.60E-09
WP_023398050.1 188791 187819 - 323PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann fold3.00E-17
WP_023398049.1 191237 188804 - 810PF02624
PF00899
YcaO
ThiF
YcaO cyclodehydratase, ATP-ad Mg2+-binding
ThiF family
6.00E-59
1.30E-15

Results for WP_018679307.1 [Acinetobacter tjernbergiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018679315.1 50562 50976 + 137PF13411
PF00376
PF09278
MerR_1
MerR
MerR-DNA-bind
MerR HTH family regulatory protein
MerR family regulatory protein
MerR, DNA binding
1.80E-19
4.20E-15
2.30E-11
WP_018679314.1 51109 52018 + 302PF12146
PF00561
PF02129
PF12697
PF05448
Hydrolase_4
Abhydrolase_1
Peptidase_S15
Abhydrolase_6
AXE1
Serine aminopeptidase, S33
alpha/beta hydrolase fold
X-Pro dipeptidyl-peptidase (S15 family)
Alpha/beta hydrolase family
Acetyl xylan esterase (AXE1)
4.80E-17
2.00E-12
5.10E-11
2.00E-09
2.60E-09
WP_018679313.1 52031 52865 + 277PF00106
PF13561
PF08659
PF01370
adh_short
adh_short_C2
KR
Epimerase
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD dependent epimerase/dehydratase family
2.80E-45
4.20E-36
1.20E-12
9.00E-04
WP_018679312.1 53871 52872 - 332PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
6.60E-28
1.10E-17
1.00E-07
WP_018679311.1 54138 54945 + 268PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
2.30E-10
1.60E-05
WP_018679310.1 55133 56174 + 346PF06314ADCAcetoacetate decarboxylase (ADC)2.90E-07
WP_018679309.1 57522 56454 - 355PF03435
PF13460
Sacchrp_dh_NADP
NAD_binding_10
Saccharopine dehydrogenase NADP binding domain
NAD(P)H-binding
9.00E-13
9.20E-08
WP_018679308.1 58773 57534 - 412PF00724
PF00977
PF01207
PF02581
Oxidored_FMN
His_biosynth
Dus
TMP-TENI
NADH:flavin oxidoreductase / NADH oxidase family
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Thiamine monophosphate synthase
2.30E-58
2.90E-06
7.90E-05
7.30E-04
WP_018679307.1 61262 59057 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.60E-76
4.40E-72
1.30E-08
WP_018679306.1 62648 61481 - 388NO PFAM MATCH---
WP_018679305.1 63979 62659 - 439PF02321OEPOuter membrane efflux protein8.50E-43
WP_018679304.1 65562 63975 - 528PF03321GH3GH3 auxin-responsive promoter4.20E-79
WP_171067638.1 66347 65558 - 262NO PFAM MATCH---
WP_018679302.1 68081 66533 - 515PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
3.40E-42
2.10E-04
WP_018679301.1 69168 68106 - 353PF13437
PF16576
PF13533
PF00529
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
Biotin-requiring enzyme
3.20E-19
6.10E-17
9.00E-14
6.40E-08
9.20E-04
WP_018679300.1 69869 71042 + 390PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
5.10E-126
1.40E-18
WP_018679299.1 71550 72927 + 458PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
3.80E-38
4.50E-17

Results for WP_023398424.1 [Pseudoalteromonas luteoviolacea NCIMB 1944] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023398416.1 38913 39840 + 308PF15575Imm49Immunity protein 494.10E-05
WP_023398417.1 40361 39875 - 161PF00583
PF13508
PF13673
PF13302
PF08445
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_3
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
3.50E-17
5.20E-10
5.50E-09
1.50E-06
3.30E-04
WP_023398418.1 40536 41376 + 279PF01145Band_7SPFH domain / Band 7 family4.10E-16
WP_023398419.1 43186 41449 - 578NO PFAM MATCH---
WP_023398420.1 43494 44811 + 438PF13738
PF07992
PF13434
PF01266
PF00743
Pyr_redox_3
Pyr_redox_2
Lys_Orn_oxgnase
DAO
FMO-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
FAD dependent oxidoreductase
Flavin-binding monooxygenase-like
3.10E-19
2.50E-14
2.90E-08
3.00E-08
3.40E-07
WP_023398421.1 44823 46092 + 422PF07690MFS_1Major Facilitator Superfamily4.70E-22
WP_023398422.1 47012 46256 - 251NO PFAM MATCH---
WP_023398423.1 50244 47391 - 950PF13229
PF13517
Beta_helix
FG-GAP_3
Right handed beta helix region
FG-GAP-like repeat
2.30E-05
2.80E-04
WP_023398424.1 52564 50422 - 713PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-75
WP_023398425.1 53718 52566 - 383PF04909Amidohydro_2Amidohydrolase5.70E-27
WP_023398426.1 54607 53809 - 265NO PFAM MATCH---
WP_155250737.1 58670 54674 - 1331PF00069
PF07714
PF13191
PF17874
PF01636
Pkinase
PK_Tyr_Ser-Thr
AAA_16
TPR_MalT
APH
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
MalT-like TPR region
Phosphotransferase enzyme family
8.00E-47
5.70E-26
5.20E-13
4.90E-05
1.20E-04
WP_023398428.1 59053 59854 + 266PF00165
PF12833
PF02311
HTH_AraC
HTH_18
AraC_binding
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
AraC-like ligand binding domain
1.10E-22
1.60E-22
3.60E-15
WP_023398429.1 59858 60542 + 227PF03591AzlCAzlC protein6.40E-38
WP_023398430.1 60538 60838 + 99PF05437AzlDBranched-chain amino acid transport protein (AzlD)1.70E-21

Results for WP_023394018.1 [Candidatus Halobonum tyrrellensis G22] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023394011.1 53999 53111 - 295PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
3.40E-69
5.80E-35
WP_023394012.1 56987 54185 - 933PF15780
PF07610
PF12371
PF07705
PF14874
ASH
DUF1573
TMEM131_like_N
CARDB
PapD-like
Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin
Protein of unknown function (DUF1573)
Transmembrane protein 131-like N-terminal
CARDB
Flagellar-associated PapD-like
1.40E-76
5.70E-52
1.10E-21
5.90E-13
8.70E-13
WP_023394013.1 59278 56983 - 764PF15780
PF00082
PF07610
PF12371
ASH
Peptidase_S8
DUF1573
TMEM131_like_N
Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin
Subtilase family
Protein of unknown function (DUF1573)
Transmembrane protein 131-like N-terminal
2.40E-21
5.30E-20
3.00E-11
6.80E-04
WP_049947684.1 59721 59274 - 148NO PFAM MATCH---
WP_023394015.1 61077 59826 - 416PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
7.20E-149
7.90E-06
4.00E-04
WP_023394016.1 61185 63252 + 688NO PFAM MATCH---
WP_152529773.1 63448 63259 - 62NO PFAM MATCH---
WP_200862301.1 63598 64420 + 273PF19138DUF5821Family of unknown function (DUF5821)3.00E-96
WP_023394018.1 64538 66230 + 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-53
WP_023394019.1 66319 67882 + 520PF028725_nucleotid_C5'-nucleotidase, C-terminal domain8.90E-31
WP_023394020.1 67963 68392 + 142PF00582UspUniversal stress protein family2.00E-07
WP_049947686.1 68447 69395 + 315PF03099
PF02237
PF08279
PF12840
PF13412
BPL_LplA_LipB
BPL_C
HTH_11
HTH_20
HTH_24
Biotin/lipoate A/B protein ligase family
Biotin protein ligase C terminal domain
HTH domain
Helix-turn-helix domain
Winged helix-turn-helix DNA-binding
1.20E-15
2.70E-12
5.30E-09
5.60E-05
9.70E-04
K933_RS07110 69470 69707 + 79INFERRED GENE---

Results for WP_023401469.1 [Pseudoalteromonas luteoviolacea NCIMB 1944] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023401477.1 288579 288021 - 185PF00485
PF13238
PF13401
PF01712
PF13671
PRK
AAA_18
AAA_22
dNK
AAA_33
Phosphoribulokinase / Uridine kinase family
AAA domain
AAA domain
Deoxynucleoside kinase
AAA domain
2.90E-08
2.90E-06
2.30E-05
2.40E-05
5.00E-05
WP_155250818.1 288929 288620 - 102NO PFAM MATCH---
WP_023401475.1 289672 289036 - 211PF00132
PF14602
Hexapep
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
2.60E-11
2.70E-05
WP_023401474.1 290225 289691 - 177PF01885PTS_2-RNARNA 2'-phosphotransferase, Tpt1 / KptA family1.50E-41
WP_023401473.1 290595 290304 - 96PF03992ABMAntibiotic biosynthesis monooxygenase5.40E-04
WP_023401472.1 291576 290682 - 297PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
6.10E-19
1.10E-14
WP_023401471.1 292709 291662 - 348PF17676
PF02016
Peptidase_S66C
Peptidase_S66
LD-carboxypeptidase C-terminal domain
LD-carboxypeptidase N-terminal domain
5.00E-31
2.80E-28
WP_023401470.1 293011 293335 + 107NO PFAM MATCH---
WP_023401469.1 295584 293400 - 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-72
4.70E-72
5.30E-09
WP_023401468.1 296091 295872 - 72PF20110DUF6500Family of unknown function (DUF6500)4.10E-27
WP_023401467.1 296531 296330 - 66PF01361
PF14552
Tautomerase
Tautomerase_2
Tautomerase enzyme
Tautomerase enzyme
4.50E-19
3.30E-05
WP_023401466.1 296915 296549 - 121PF12893
PF13577
Lumazine_bd_2
SnoaL_4
Putative lumazine-binding
SnoaL-like domain
6.30E-26
6.50E-04
WP_023401465.1 297543 296931 - 203PF02798
PF13417
GST_N
GST_N_3
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
3.70E-08
1.40E-06
WP_023401464.1 297695 298592 + 298PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-29
7.10E-18
WP_196764406.1 299508 298581 - 308PF00165
PF12833
HTH_AraC
HTH_18
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
1.50E-17
1.00E-15
WP_023401462.1 302652 299562 - 1029PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
4.90E-143
4.10E-09
6.50E-06
WP_023401461.1 303797 302651 - 381PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
1.80E-12
4.50E-11

Results for WP_023420775.1 [Streptomyces sp. PVA_94-07] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023420767.1 6540281 6539027 - 417NO PFAM MATCH---
WP_037787547.1 6540451 6541441 + 329PF01497Peripla_BP_2Periplasmic binding protein1.20E-16
WP_023420769.1 6541437 6542472 + 344PF01032FecCDFecCD transport family7.70E-66
WP_037788141.1 6542468 6543524 + 351PF01032FecCDFecCD transport family1.60E-66
WP_023420771.1 6543645 6544482 + 278PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.50E-28
1.90E-06
4.80E-04
WP_023420772.1 6544550 6544685 + 44NO PFAM MATCH---
WP_018470988.1 6544827 6545672 + 281INFERRED GENE---
WP_023420774.1 6545668 6547198 + 509PF02129
PF08530
PF00326
Peptidase_S15
PepX_C
Peptidase_S9
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Prolyl oligopeptidase family
7.90E-40
4.60E-18
1.10E-04
WP_023420775.1 6547194 6548562 + 455PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-35
WP_023420776.1 6548575 6549883 + 435PF00881NitroreductaseNitroreductase family5.00E-05
WP_023420777.1 6549941 6551684 + 580PF00005
PF00664
PF02463
PF13191
PF13401
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
4.60E-32
5.70E-10
3.90E-06
7.50E-05
1.30E-04
WP_023420778.1 6551680 6553465 + 594PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.10E-26
1.00E-09
7.10E-05
9.90E-05
WP_003946613.1 6554074 6553558 - 171PF01625PMSRPeptide methionine sulfoxide reductase2.60E-56
WP_023420779.1 6554296 6554770 + 157PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.70E-12
3.00E-09
8.50E-06
WP_003946611.1 6554919 6555481 + 187INFERRED GENE---
WP_023420781.1 6556670 6555560 - 369PF01594AI-2E_transportAI-2E family transporter1.30E-52
WP_051367820.1 6557381 6557888 + 168NO PFAM MATCH---

Results for WP_023417534.1 [Streptomyces sp. PVA_94-07] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023417526.1 2615857 2613847 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-76
WP_023417527.1 2616713 2615957 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.60E-29
1.90E-21
3.10E-05
WP_023417528.1 2617703 2616761 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_023417529.1 2618872 2617753 - 372PF02163Peptidase_M50Peptidase family M506.60E-04
WP_023417530.1 2619936 2618868 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.00E-95
WP_023417531.1 2622698 2619932 - 921PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-46
WP_023417532.1 2624302 2622694 - 535PF00881NitroreductaseNitroreductase family2.70E-18
WP_023417533.1 2626308 2624355 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-81
WP_023417534.1 2628520 2626297 - 740NO PFAM MATCH---
WP_023417535.1 2630413 2628526 - 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.10E-38
1.40E-09
3.10E-08
1.40E-06
5.80E-04
WP_023417536.1 2630655 2630421 - 77NO PFAM MATCH---
WP_023417537.1 2631103 2632696 + 530PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.00E-50
5.20E-12
3.70E-11
WP_037970318.1 2633267 2632715 - 183PF13977
PF00440
PF17754
PF16859
TetR_C_6
TetR_N
TetR_C_14
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
MftR C-terminal domain
Tetracyclin repressor-like, C-terminal domain
4.20E-21
8.50E-11
4.20E-04
7.40E-04
WP_023417539.1 2633385 2633949 + 187PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.90E-18
1.30E-06
WP_023417540.1 2634753 2633985 - 255PF05630NPP1Necrosis inducing protein (NPP1)4.60E-62
WP_023417541.1 2635035 2635290 + 84NO PFAM MATCH---
WP_023417542.1 2635352 2636204 + 283PF00561
PF12697
PF12146
PF03096
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Ndr
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Ndr family
9.70E-23
1.10E-16
2.90E-11
6.50E-04

Results for WP_023417533.1 [Streptomyces sp. ADI96-15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026048345.1 218885 219062 + 58NO PFAM MATCH---
WP_124273740.1 221050 219145 - 634PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-76
WP_023417527.1 222429 221673 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.60E-29
1.90E-21
3.10E-05
WP_023421891.1 223421 222479 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_023417529.1 224590 223471 - 372PF02163Peptidase_M50Peptidase family M506.60E-04
WP_023421893.1 225654 224586 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.80E-96
WP_023417531.1 228416 225650 - 921PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-46
WP_023417532.1 230020 228412 - 535PF00881NitroreductaseNitroreductase family2.70E-18
WP_023417533.1 232026 230073 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-81
WP_124273558.1 234238 232015 - 740NO PFAM MATCH---
WP_124273559.1 236131 234244 - 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.10E-38
1.40E-09
3.10E-08
1.10E-06
5.70E-04
WP_023421898.1 236373 236139 - 77NO PFAM MATCH---
WP_023417537.1 236819 238412 + 530PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.00E-50
5.20E-12
3.70E-11
WP_124273741.1 238983 238431 - 183PF13977
PF00440
PF17754
PF16859
TetR_C_6
TetR_N
TetR_C_14
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
MftR C-terminal domain
Tetracyclin repressor-like, C-terminal domain
4.20E-21
9.90E-10
4.90E-04
7.40E-04
WP_023421900.1 239101 239665 + 187PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.30E-18
1.50E-06
WP_023417540.1 240683 239915 - 255PF05630NPP1Necrosis inducing protein (NPP1)4.60E-62
WP_023417541.1 240965 241220 + 84NO PFAM MATCH---

Results for WP_023418727.1 [Streptomyces sp. GBA 94-10 4N24] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023418720.1 4132763 4133135 + 123NO PFAM MATCH---
WP_023422473.1 4133131 4134073 + 313PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.70E-28
2.20E-14
1.10E-04
WP_023418722.1 4134069 4134867 + 265PF12698
PF12730
ABC2_membrane_3
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
2.40E-05
1.40E-04
WP_023422474.1 4135188 4134930 - 85PF03621MbtHMbtH-like protein5.50E-30
WP_023422475.1 4136172 4135362 - 269PF12697
PF00561
PF12146
PF08386
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
TAP-like protein
1.00E-19
4.40E-17
2.10E-10
7.80E-05
WP_033950788.1 4137633 4136208 - 474PF00171AldedhAldehyde dehydrogenase family9.70E-28
WP_023418725.1 4138527 4139475 + 315PF12840
PF01022
PF12802
PF13545
PF13412
HTH_20
HTH_5
MarR_2
HTH_Crp_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Crp-like helix-turn-helix domain
Winged helix-turn-helix DNA-binding
3.00E-08
1.70E-06
3.20E-05
2.80E-04
3.00E-04
WP_023418726.1 4139710 4139887 + 58NO PFAM MATCH---
WP_023418727.1 4139883 4142175 + 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-98
WP_023418728.1 4142320 4143583 + 420PF07730HisKA_3Histidine kinase2.70E-15
WP_023418729.1 4143625 4144237 + 203PF00072
PF00196
PF08281
PF13384
PF04545
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Sigma-70, region 4
1.80E-19
8.70E-18
6.60E-06
1.40E-05
1.50E-04
WP_023418730.1 4144930 4144246 - 227NO PFAM MATCH---
WP_230536991.1 4146515 4145102 - 470PF03703bPH_2Bacterial PH domain5.70E-45
WP_033950811.1 4147324 4146790 - 177PF03703bPH_2Bacterial PH domain1.40E-14
WP_023418733.1 4147355 4148498 + 380PF00346Complex1_49kDaRespiratory-chain NADH dehydrogenase, 49 Kd subunit3.90E-67
WP_023422478.1 4149658 4148611 - 348PF02636Methyltransf_28Putative S-adenosyl-L-methionine-dependent methyltransferase4.30E-16
WP_023418735.1 4149847 4151053 + 401PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
5.00E-22
1.20E-04

Results for WP_023417526.1 [Streptomyces sp. GBA 94-10 4N24] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023421885.1 2566776 2567109 + 110NO PFAM MATCH---
WP_023421886.1 2570668 2567134 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
6.80E-32
1.00E-24
1.60E-23
8.50E-17
7.50E-16
WP_023421887.1 2571098 2572103 + 334PF00196GerEBacterial regulatory proteins, luxR family1.70E-05
WP_023421888.1 2573523 2572104 - 472PF01425AmidaseAmidase1.30E-94
WP_023417523.1 2573656 2574271 + 204PF13977
PF00440
PF17940
TetR_C_6
TetR_N
TetR_C_31
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
2.90E-22
7.00E-09
2.80E-04
WP_023417524.1 2574520 2574259 - 86NO PFAM MATCH---
WP_023421889.1 2575815 2574516 - 432PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
4.70E-17
9.50E-11
WP_026048345.1 2576015 2576192 + 58NO PFAM MATCH---
WP_023417526.1 2578285 2576275 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-76
WP_023417527.1 2579141 2578385 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.60E-29
1.90E-21
3.10E-05
WP_023421891.1 2580132 2579190 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_023421892.1 2581301 2580182 - 372PF02163Peptidase_M50Peptidase family M506.70E-04
WP_023421893.1 2582365 2581297 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.80E-96
WP_234025347.1 2585097 2582361 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.80E-46
WP_023421895.1 2586731 2585123 - 535PF00881NitroreductaseNitroreductase family5.60E-18
WP_023421896.1 2588737 2586784 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-81
WP_023421897.1 2590949 2588726 - 740NO PFAM MATCH---

Results for WP_023458714.1 [Asticcacaulis sp. AC466] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023458707.1 72807 70839 - 655PF00326
PF20434
PF01738
PF02230
PF12146
Peptidase_S9
BD-FAE
DLH
Abhydrolase_2
Hydrolase_4
Prolyl oligopeptidase family
BD-FAE
Dienelactone hydrolase family
Phospholipase/Carboxylesterase
Serine aminopeptidase, S33
2.00E-49
6.90E-13
4.00E-11
1.50E-09
3.00E-09
WP_013477611.1 72910 73094 + 61INFERRED GENE---
WP_023458709.1 73900 73561 - 112NO PFAM MATCH---
WP_081714650.1 74256 73887 - 122PF14220DUF4329Domain of unknown function (DUF4329)4.50E-08
WP_023458710.1 74664 74280 - 127NO PFAM MATCH---
WP_023458711.1 74808 74988 + 59NO PFAM MATCH---
WP_155913684.1 75176 74996 - 59NO PFAM MATCH---
WP_023458713.1 76010 75197 - 270PF00881NitroreductaseNitroreductase family2.80E-17
WP_023458714.1 77326 76027 - 432PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-46
WP_023458715.1 78189 77316 - 290NO PFAM MATCH---
WP_023458717.1 78848 78515 - 110PF13601
PF13463
HTH_34
HTH_27
Winged helix DNA-binding domain
Winged helix DNA-binding domain
2.30E-16
3.50E-04
WP_023458718.1 79477 78844 - 210NO PFAM MATCH---
WP_023458719.1 79943 79700 - 80PF07238PilZPilZ domain1.30E-07
WP_023458720.1 80143 80899 + 251PF06057
PF00561
VirJ
Abhydrolase_1
Bacterial virulence protein (VirJ)
alpha/beta hydrolase fold
3.60E-43
7.50E-04
WP_023458721.1 83502 80916 - 861PF09924LPG_synthase_CPhosphatidylglycerol lysyltransferase, C-terminal1.90E-82
WP_023458722.1 84220 83632 - 195PF06210DUF1003Protein of unknown function (DUF1003)4.90E-36
WP_023458723.1 84726 87066 + 779PF14498Glyco_hyd_65N_2Glycosyl hydrolase family 65, N-terminal domain2.70E-63

Results for WP_014326049.1 back to top

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Couldn't process WP_014326049.1 Genbank filestream. May be corrupt.

Results for WP_023471958.1 [Betaproteobacteria bacterium MOLA814] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023471950.1 647274 644979 - 764PF07992
PF02769
PF00586
PF00070
Pyr_redox_2
AIRS_C
AIRS
Pyr_redox
Pyridine nucleotide-disulphide oxidoreductase
AIR synthase related protein, C-terminal domain
AIR synthase related protein, N-terminal domain
Pyridine nucleotide-disulphide oxidoreductase
2.20E-26
2.80E-22
1.80E-14
3.00E-04
WP_023471951.1 648278 647249 - 342PF00534
PF13692
Glycos_transf_1
Glyco_trans_1_4
Glycosyl transferases group 1
Glycosyl transferases group 1
1.70E-11
1.30E-08
WP_023471952.1 648292 649570 + 425PF03781
PF12867
FGE-sulfatase
DinB_2
Sulfatase-modifying factor enzyme 1
DinB superfamily
7.00E-18
6.40E-07
WP_035003478.1 650559 649566 - 330PF10017Methyltransf_33Histidine-specific methyltransferase, SAM-dependent2.00E-93
WP_081708179.1 650683 651562 + 292PF12974
PF09084
PF00497
Phosphonate-bd
NMT1
SBP_bac_3
ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1/THI5 like
Bacterial extracellular solute-binding proteins, family 3
1.40E-67
9.70E-09
3.50E-06
WP_023471955.1 651629 652466 + 278PF00005
PF13304
PF02463
PF13555
PF01580
ABC_tran
AAA_21
SMC_N
AAA_29
FtsK_SpoIIIE
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
FtsK/SpoIIIE family
4.00E-25
1.70E-07
2.20E-04
5.80E-04
8.30E-04
WP_023471956.1 652468 653305 + 278PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component5.10E-08
WP_023471957.1 653334 654105 + 256PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.40E-13
WP_023471958.1 656480 654284 - 731PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.60E-69
5.90E-69
1.50E-08
WP_035003484.1 657902 656702 - 399PF02826
PF00389
PF03446
PF07991
PF00670
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
IlvN
AdoHcyase_NAD
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD binding domain of 6-phosphogluconate dehydrogenase
Acetohydroxy acid isomeroreductase, NADPH-binding domain
S-adenosyl-L-homocysteine hydrolase, NAD binding domain
5.20E-49
7.10E-35
8.60E-05
5.30E-04
6.50E-04
WP_023471960.1 659261 658157 - 367PF06463
PF04055
PF13394
PF13353
Mob_synth_C
Radical_SAM
Fer4_14
Fer4_12
Molybdenum Cofactor Synthesis C
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-37
4.60E-29
1.60E-08
3.10E-06
WP_023471961.1 659650 659257 - 130PF08238Sel1Sel1 repeat7.10E-14
WP_023471962.1 661508 659765 - 580PF02696SelOProtein adenylyltransferase SelO2.80E-69
WP_081708180.1 662137 661504 - 210PF10609
PF01106
PF01656
PF13614
PF09140
ParA
NifU
CbiA
AAA_31
MipZ
NUBPL iron-transfer P-loop NTPase
NifU-like domain
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
1.40E-22
1.50E-17
7.60E-12
5.40E-09
1.10E-07
WP_016832546.1 662377 663347 + 323INFERRED GENE---
WP_161627048.1 663511 663343 - 55NO PFAM MATCH---
WP_023471967.1 663973 663649 - 107PF11953
PF00037
PF13484
PF12837
PF12838
DUF3470
Fer4
Fer4_16
Fer4_6
Fer4_7
Domain of unknown function (DUF3470)
4Fe-4S binding domain
4Fe-4S double cluster binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
5.30E-19
1.10E-08
9.80E-07
3.90E-06
2.60E-05

Results for WP_000197742.1 back to top

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Couldn't process WP_000197742.1 Genbank filestream. May be corrupt.

Results for WP_014040449.1 [Haloarcula hispanica N601] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 1569141 1568994 - 48NO PFAM MATCH---
WP_004961169.1 1569200 1569920 + 239NO PFAM MATCH---
WP_014040443.1 1570406 1569923 - 160PF00293NUDIXNUDIX domain1.00E-12
WP_014040444.1 1571300 1570406 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
4.50E-67
2.10E-35
WP_023843272.1 1571966 1571375 - 196NO PFAM MATCH---
WP_014040446.1 1573297 1572049 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
1.80E-150
8.10E-08
WP_014040447.1 1573450 1575538 + 695NO PFAM MATCH---
WP_008309020.1 1575909 1576728 + 272PF19138DUF5821Family of unknown function (DUF5821)2.50E-97
WP_014040449.1 1576759 1578469 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_014040450.1 1579660 1578511 - 382PF01889DUF63Membrane protein of unknown function DUF634.50E-35
WP_014040451.1 1580602 1579762 - 279PF00459Inositol_PInositol monophosphatase family3.30E-47
WP_004518094.1 1580875 1580674 - 66NO PFAM MATCH---
WP_144443754.1 1580994 1581174 + 59NO PFAM MATCH---
WP_014040453.1 1581769 1582984 + 404PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
2.70E-22
2.10E-04
WP_014040454.1 1583999 1583012 - 328PF18884TSP3_bacBacterial TSP3 repeat1.40E-11
WP_014040455.1 1584225 1585671 + 481PF01882DUF58Protein of unknown function DUF581.50E-20
WP_014040456.1 1585667 1586168 + 166NO PFAM MATCH---

Results for WP_007782512.1 [Cronobacter malonaticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032986317.1 58104 62262 + 1385PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
4.70E-74
5.70E-42
3.00E-28
5.80E-28
6.10E-05
WP_004387365.1 62451 63066 + 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.40E-58
WP_202628711.1 63135 64422 + 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.00E-65
1.30E-23
8.00E-17
7.20E-14
8.80E-07
WP_007782500.1 64517 65810 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.20E-37
2.60E-33
WP_007792277.1 66106 67255 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.10E-25
5.90E-10
9.90E-06
5.10E-04
WP_007782507.1 68029 67288 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.00E-32
8.00E-19
2.80E-06
WP_007782508.1 70507 68224 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.60E-210
5.20E-44
WP_012125217.1 71374 70558 - 271PF01226Form_Nir_transFormate/nitrite transporter5.20E-75
WP_007782512.1 73583 71819 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-84
2.90E-67
WP_032968748.1 73724 74417 + 230PF04239DUF421Protein of unknown function (DUF421)3.60E-16
WP_007782516.1 74579 75665 + 361PF00266Aminotran_5Aminotransferase class-V3.50E-71
WP_023899055.1 75732 77019 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.60E-152
WP_014729209.1 77196 77883 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
1.50E-85
9.80E-08
8.40E-05
2.10E-04
6.20E-04
WP_004387354.1 77994 79668 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.80E-99
3.40E-12
3.30E-07
WP_004387353.1 79782 80067 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_050500435.1 80304 82530 + 741PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
7.90E-53
7.90E-15
2.60E-11
2.60E-04
WP_007782525.1 82566 84315 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
1.40E-60
6.90E-36
1.00E-10
1.90E-05
1.60E-04

Results for WP_023654614.1 [Erwinia piriflorinigrans CFBP 5888] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004162024.1 154691 158149 + 1152INFERRED GENE---
WP_023654607.1 158347 158959 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.10E-57
3.90E-06
WP_023654608.1 158966 160310 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.40E-63
2.70E-24
1.10E-15
6.40E-14
1.40E-06
WP_023654609.1 160405 161698 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.90E-37
9.30E-33
WP_023654610.1 161990 163142 + 383PF07690
PF06779
PF00083
PF12832
PF13347
MFS_1
MFS_4
Sugar_tr
MFS_1_like
MFS_2
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
MFS/sugar transport protein
5.10E-35
3.90E-10
7.50E-09
1.20E-04
9.40E-04
WP_023654611.1 163914 163173 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.90E-32
3.60E-17
1.40E-05
WP_023654612.1 166324 164041 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.70E-205
2.00E-42
WP_023654613.1 167268 166410 - 285PF01226Form_Nir_transFormate/nitrite transporter7.00E-75
WP_023654614.1 169430 167672 - 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.30E-83
1.20E-66
WP_023654615.1 169738 170824 + 361PF00266Aminotran_5Aminotransferase class-V3.70E-64
WP_023654616.1 170914 172201 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.70E-148
WP_023654617.1 172345 173029 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
7.30E-82
6.70E-07
6.50E-04
7.70E-04
WP_012668556.1 173182 174856 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.60E-98
9.20E-13
8.20E-07
WP_012441858.1 174937 175225 + 95PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
5.50E-29
1.90E-07
WP_023654618.1 175424 177689 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.60E-53
4.90E-19
1.70E-06
3.10E-04
WP_023654619.1 177725 179474 + 582PF00664
PF00005
PF02463
PF00270
PF01935
ABC_membrane
ABC_tran
SMC_N
DEAD
DUF87
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Helicase HerA, central domain
1.30E-58
1.50E-34
1.50E-10
9.10E-06
3.50E-04
WP_023654620.1 179470 180451 + 326PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.30E-111

Results for WP_023657506.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023541197.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_023543565.1 [Streptomyces niveus NCIMB 11891] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023543557.1 8196447 8197680 + 410PF00109
PF02801
ketoacyl-synt
Ketoacyl-synt_C
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
3.80E-43
5.30E-30
WP_023543558.1 8197676 8198453 + 258PF13561
PF00106
PF13579
PF08659
adh_short_C2
adh_short
Glyco_trans_4_4
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
Glycosyl transferase 4-like domain
KR domain
1.90E-47
8.30E-24
2.90E-04
4.50E-04
WP_023543559.1 8198464 8199475 + 336PF07993
PF01370
PF04321
PF13460
NAD_binding_4
Epimerase
RmlD_sub_bind
NAD_binding_10
Male sterility protein
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
NAD(P)H-binding
8.10E-28
1.20E-07
4.80E-07
5.50E-05
WP_023543560.1 8199471 8200758 + 428PF00202Aminotran_3Aminotransferase class-III2.00E-80
WP_023543561.1 8200817 8201366 + 182PF03364
PF10604
Polyketide_cyc
Polyketide_cyc2
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
4.70E-14
1.00E-09
WP_023543562.1 8201362 8202553 + 396PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain8.10E-04
WP_158689609.1 8202611 8203541 + 309NO PFAM MATCH---
WP_023543564.1 8203544 8205347 + 600PF00881NitroreductaseNitroreductase family2.80E-13
WP_023543565.1 8205343 8207503 + 719PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-67
WP_023543566.1 8207521 8208304 + 260PF19369DUF5944Family of unknown function (DUF5944)3.70E-112
WP_023543567.1 8208291 8208981 + 230PF00675
PF05193
Peptidase_M16
Peptidase_M16_C
Insulinase (Peptidase family M16)
Peptidase M16 inactive domain
7.50E-10
7.70E-04
WP_031232500.1 8209922 8210386 + 153NO PFAM MATCH---
WP_023543568.1 8210382 8211453 + 356PF05193Peptidase_M16_CPeptidase M16 inactive domain2.80E-10
WP_023543569.1 8211449 8212325 + 291PF03476
PF03473
MOSC_N
MOSC
MOSC N-terminal beta barrel domain
MOSC domain
8.50E-11
1.80E-09
WP_023543570.1 8213624 8212409 - 404PF07690
PF06779
MFS_1
MFS_4
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
7.20E-44
2.50E-04
WP_023543571.1 8214280 8213620 - 219PF00440TetR_NBacterial regulatory proteins, tetR family9.70E-15
WP_023543572.1 8214951 8214381 - 189PF04978
PF12867
DUF664
DinB_2
Protein of unknown function (DUF664)
DinB superfamily
8.40E-36
3.20E-05

Results for WP_023554016.1 [Streptomyces roseochromogenus subsp. oscitans DS 12.976] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023554008.1 15705 16770 + 354PF12642TpcCConjugative transposon protein TcpC6.90E-35
WP_023554009.1 16766 17072 + 101NO PFAM MATCH---
WP_158692943.1 17068 17728 + 219PF12648TcpETcpE family9.00E-06
WP_023554011.1 17736 20322 + 861PF12846AAA_10AAA-like domain7.80E-79
WP_158692944.1 20318 22263 + 648NO PFAM MATCH---
WP_023554013.1 23182 24301 + 372PF00877
PF13406
NLPC_P60
SLT_2
NlpC/P60 family
Transglycosylase SLT domain
1.70E-28
2.70E-07
WP_023554014.1 26128 25114 - 337PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
9.70E-51
1.10E-47
1.50E-22
5.50E-10
9.50E-07
WP_023554015.1 26976 26190 - 261PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.10E-17
7.90E-16
3.80E-12
2.50E-08
9.90E-08
WP_023554016.1 28117 26968 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-61
WP_023554017.1 29298 28113 - 394PF07812TfuATfuA-like protein1.60E-39
WP_023554019.1 30037 29863 - 57NO PFAM MATCH---
WP_023554020.1 30881 30296 - 194NO PFAM MATCH---
WP_245238462.1 31576 30877 - 232PF13581HATPase_c_2Histidine kinase-like ATPase domain4.90E-07
WP_158692945.1 32353 31816 - 178NO PFAM MATCH---
WP_158692946.1 33362 32480 - 293NO PFAM MATCH---
WP_023554026.1 33664 34525 + 286PF19054
PF13560
PF13744
PF01381
DUF5753
HTH_31
HTH_37
HTH_3
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix
3.00E-54
2.20E-13
1.70E-05
2.70E-04
WP_031227475.1 34527 34743 + 71PF04149DUF397Domain of unknown function (DUF397)7.90E-19

Results for WP_023544308.1 [Streptomyces roseochromogenus subsp. oscitans DS 12.976] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023544299.1 254371 255250 + 292PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
7.40E-40
2.80E-20
WP_023544300.1 255249 256419 + 389PF00441
PF02771
PF02770
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
7.90E-19
9.70E-19
5.50E-17
WP_023544301.1 256418 257408 + 329PF00441
PF02771
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
1.50E-23
2.80E-14
2.50E-08
WP_023544302.1 257533 258607 + 357PF00441
PF02771
PF08028
PF02770
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
6.20E-27
2.50E-11
6.00E-09
1.60E-06
WP_023544303.1 258698 259277 + 192PF01613Flavin_ReductFlavin reductase like domain1.70E-42
WP_023544304.1 259798 259204 - 197PF03551
PF10400
PadR
Vir_act_alpha_C
Transcriptional regulator PadR-like family
Virulence activator alpha C-term
1.90E-11
5.30E-06
WP_023544305.1 261403 260248 - 384PF13692
PF00534
PF13524
PF13439
PF13579
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_1_2
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
2.20E-19
2.00E-17
5.80E-14
7.60E-08
2.90E-07
WP_158692617.1 261889 262858 + 322NO PFAM MATCH---
WP_023544308.1 262857 264060 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-27
WP_023544309.1 264109 264925 + 271PF13649
PF08241
PF13489
PF08242
PF13847
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
6.50E-14
3.60E-10
9.10E-09
3.00E-07
1.10E-05
WP_031223641.1 265037 266237 + 399PF00067p450Cytochrome P4501.20E-24
WP_023544311.1 266251 267070 + 272PF00248Aldo_ket_redAldo/keto reductase family2.40E-49
WP_245238006.1 267267 267102 - 54NO PFAM MATCH---
WP_023544313.1 267440 267689 + 82PF01695IstB_IS21IstB-like ATP binding protein8.00E-06
WP_018843744.1 267700 267893 + 64INFERRED GENE---
WP_051430054.1 268656 268062 - 197PF00440TetR_NBacterial regulatory proteins, tetR family8.30E-15
WP_023544316.1 268767 269613 + 281PF00106
PF13561
PF08659
PF12242
adh_short
adh_short_C2
KR
Eno-Rase_NADH_b
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD(P)H binding domain of trans-2-enoyl-CoA reductase
3.70E-46
1.70E-33
2.70E-12
8.50E-05

Results for WP_023529352.1 [Streptomycetaceae bacterium MP113-05] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023529344.1 193220 190610 - 869PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
2.60E-53
3.00E-32
2.20E-25
3.50E-23
1.00E-16
WP_081746946.1 193124 193838 + 237PF01243Putative_PNPOxPyridoxamine 5'-phosphate oxidase8.50E-11
WP_031221174.1 194250 195258 + 335PF05572
PF13688
PF13582
Peptidase_M43
Reprolysin_5
Reprolysin_3
Pregnancy-associated plasma protein-A
Metallo-peptidase family M12
Metallo-peptidase family M12B Reprolysin-like
1.70E-18
2.30E-05
1.50E-04
WP_023529347.1 195662 195479 - 60NO PFAM MATCH---
WP_031221176.1 195663 196641 + 325PF01978
PF00196
TrmB
GerE
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory proteins, luxR family
1.90E-06
4.90E-05
WP_031221178.1 196984 196702 - 93NO PFAM MATCH---
WP_018853901.1 196980 198025 + 348INFERRED GENE---
WP_023529351.1 198219 198396 + 58NO PFAM MATCH---
WP_023529352.1 200614 198571 - 680PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-76
WP_023529353.1 201366 200610 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.10E-31
5.40E-19
WP_031221179.1 202333 201421 - 303PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
3.00E-26
3.80E-15
1.00E-05
7.40E-05
5.90E-04
WP_023529355.1 203541 202416 - 374PF02163Peptidase_M50Peptidase family M507.00E-04
WP_023529356.1 204626 203537 - 362PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.20E-92
WP_023529357.1 207421 204622 - 932PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.00E-48
WP_010059793.1 207425 207658 + 77INFERRED GENE---
WP_018853905.1 207913 208732 + 273INFERRED GENE---
WP_031221183.1 210399 208864 - 510PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-78

Results for WP_023555514.1 [Brevibacillus panacihumi W25] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023555504.1 412303 413941 + 545PF00069
PF00196
PF07714
PF13185
PF08281
Pkinase
GerE
PK_Tyr_Ser-Thr
GAF_2
Sigma70_r4_2
Protein kinase domain
Bacterial regulatory proteins, luxR family
Protein tyrosine and serine/threonine kinase
GAF domain
Sigma-70, region 4
2.50E-21
2.30E-19
2.40E-12
3.40E-05
5.00E-04
WP_023555505.1 414002 418955 + 1650PF00395
PF20578
PF12733
PF05345
PF19789
SLH
aBig_2
Cadherin-like
He_PIG
DUF6273
S-layer homology domain
Atrophied bacterial Ig domain
Cadherin-like beta sandwich domain
Putative Ig domain
Family of unknown function (DUF6273)
4.90E-36
6.10E-33
2.00E-19
5.20E-10
3.20E-09
WP_023555506.1 419113 419782 + 222PF00395SLHS-layer homology domain1.90E-05
WP_252989890.1 420444 419826 - 205PF13489
PF08241
PF13649
PF13847
PF01209
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_31
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
2.90E-15
2.00E-14
4.40E-14
9.30E-11
5.80E-07
WP_023555508.1 420923 420560 - 120PF05504Spore_GerACSpore germination B3/ GerAC like, C-terminal6.20E-15
WP_023555509.1 421069 421891 + 273PF00561
PF12697
Abhydrolase_1
Abhydrolase_6
alpha/beta hydrolase fold
Alpha/beta hydrolase family
5.70E-18
1.10E-11
WP_023555510.1 422062 422623 + 186PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
1.20E-31
5.10E-06
WP_023555513.1 423238 425158 + 639NO PFAM MATCH---
WP_023555514.1 425157 427101 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.40E-86
WP_023555515.1 427123 428692 + 522PF00881NitroreductaseNitroreductase family8.50E-15
WP_023555516.1 429667 428749 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-28
1.70E-17
WP_023555517.1 429811 430558 + 248PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.40E-73
9.90E-58
1.90E-13
WP_023555518.1 430864 432220 + 451PF07690
PF00083
PF06779
PF05977
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_3
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
Transmembrane secretion effector
MFS_1 like family
3.50E-59
1.50E-30
7.50E-13
3.80E-07
3.00E-05
WP_023555519.1 432383 433241 + 285PF02737
PF00725
3HCDH_N
3HCDH
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
1.90E-68
1.50E-35
WP_144083933.1 433259 434039 + 259PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.20E-73
1.40E-35
WP_023555521.1 434054 435287 + 410PF01494
PF07992
PF01266
PF00070
PF13738
FAD_binding_3
Pyr_redox_2
DAO
Pyr_redox
Pyr_redox_3
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
4.90E-43
2.10E-10
8.70E-10
1.30E-08
7.30E-08
WP_023555522.1 435330 435786 + 151PF13279
PF03061
4HBT_2
4HBT
Thioesterase-like superfamily
Thioesterase superfamily
1.30E-12
7.70E-11

Results for WP_023636132.1 [Corynebacterium ulcerans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013912132.1 2046773 2047532 + 252NO PFAM MATCH---
WP_230478283.1 2048896 2047564 - 443PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-42
WP_227914309.1 2048921 2049074 + 50NO PFAM MATCH---
WP_013912130.1 2049264 2049090 - 57NO PFAM MATCH---
WP_023636136.1 2050280 2049302 - 325NO PFAM MATCH---
WP_023636135.1 2051290 2050276 - 337PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term7.70E-78
WP_023636134.1 2053890 2051289 - 866PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.20E-14
WP_023636133.1 2055371 2053886 - 494PF00881NitroreductaseNitroreductase family2.50E-09
WP_023636132.1 2056957 2055406 - 516PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-52
WP_023636131.1 2058672 2056953 - 572NO PFAM MATCH---
WP_023636130.1 2059207 2059774 + 188PF00436SSBSingle-strand binding protein family5.70E-12
WP_014526132.1 2059942 2061613 + 556PF00005
PF13304
PF12848
PF02463
PF13555
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
2.10E-53
4.40E-17
2.30E-16
4.50E-09
2.40E-06
WP_013912121.1 2061813 2062242 + 142PF13279
PF03061
PF01643
4HBT_2
4HBT
Acyl-ACP_TE
Thioesterase-like superfamily
Thioesterase superfamily
Acyl-ACP thioesterase
4.70E-16
4.20E-11
2.70E-08
WP_023636129.1 2062247 2062856 + 202NO PFAM MATCH---
WP_038620751.1 2063763 2062866 - 298PF04657DMT_YdcZPutative inner membrane exporter, YdcZ7.90E-69
WP_115236952.1 2064167 2063774 - 130PF01152Bac_globinBacterial-like globin9.80E-35
WP_023636128.1 2065152 2064192 - 319PF00924MS_channelMechanosensitive ion channel2.30E-38

Results for WP_013973003.1 back to top

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Couldn't process WP_013973003.1 Genbank filestream. May be corrupt.

Results for WP_023716891.1 [Mesorhizobium sp. LSHC420B00] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023716883.1 449125 448930 - 64NO PFAM MATCH---
WP_023716884.1 449749 449131 - 205PF01243
PF10590
PF12766
Putative_PNPOx
PNP_phzG_C
Pyridox_oxase_2
Pyridoxamine 5'-phosphate oxidase
Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
Pyridoxamine 5'-phosphate oxidase
4.70E-26
7.50E-18
1.10E-08
WP_023716885.1 449788 450250 + 153PF1699817kDa_Anti_217 kDa outer membrane surface antigen8.40E-36
WP_023716886.1 450350 451277 + 308PF01556
PF00226
DnaJ_C
DnaJ
DnaJ C terminal domain
DnaJ domain
7.20E-29
9.50E-23
WP_023716887.1 451879 452209 + 109NO PFAM MATCH---
WP_051409559.1 452721 452205 - 171NO PFAM MATCH---
WP_023716889.1 454028 452831 - 398NO PFAM MATCH---
WP_023716890.1 454870 454081 - 262PF07812TfuATfuA-like protein1.90E-42
WP_023716891.1 456105 454872 - 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-44
WP_031193359.1 459128 456101 - 1008PF00211
PF13191
PF13401
Guanylate_cyc
AAA_16
AAA_22
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
AAA domain
9.00E-23
9.10E-19
3.10E-06
WP_023716893.1 459778 460597 + 272PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
9.10E-87
2.30E-19
WP_023716894.1 460628 461216 + 195PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.60E-42
WP_023716895.1 462195 461292 - 300PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
1.50E-05
4.20E-05
8.40E-05
WP_023716896.1 462566 463277 + 236PF01510Amidase_2N-acetylmuramoyl-L-alanine amidase2.10E-07
WP_198030448.1 463446 464658 + 403PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-33
WP_084642385.1 464682 466725 + 680PF03704BTADBacterial transcriptional activator domain2.90E-11
WP_031193363.1 467215 466747 - 155NO PFAM MATCH---

Results for WP_023805897.1 [Mesorhizobium sp. L2C089B000] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023805887.1 338006 338252 + 81PF05930Phage_AlpAProphage CP4-57 regulatory protein (AlpA)1.10E-16
WP_023805888.1 338248 340831 + 860PF08706
PF19263
D5_N
DUF5906
D5 N terminal like
Family of unknown function (DUF5906)
5.20E-19
9.80E-09
WP_023805889.1 342138 341703 - 144PF20137DUF6527Family of unknown function (DUF6527)1.00E-21
WP_023805890.1 343306 342124 - 393PF20590
PF00899
DUF6791
ThiF
Domain of unknown function (DUF6791)
ThiF family
3.20E-48
7.10E-11
WP_023805891.1 343565 343280 - 94PF14452Multi_ubiqMultiubiquitin7.50E-18
WP_023805893.1 343688 344033 + 114NO PFAM MATCH---
WP_023805894.1 344034 344610 + 191PF06114Peptidase_M78IrrE N-terminal-like domain1.20E-15
WP_023805896.1 345199 344962 - 78NO PFAM MATCH---
WP_023805897.1 346783 345529 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-57
WP_023805898.1 346857 349344 + 828PF00211
PF03704
Guanylate_cyc
BTAD
Adenylate and Guanylate cyclase catalytic domain
Bacterial transcriptional activator domain
1.80E-12
4.20E-08
WP_198028992.1 349680 351522 + 613NO PFAM MATCH---
WP_023805900.1 351792 352254 + 153NO PFAM MATCH---
WP_156941028.1 352845 353172 + 108NO PFAM MATCH---
WP_023805902.1 353705 353306 - 132NO PFAM MATCH---
WP_156941029.1 354829 353836 - 330NO PFAM MATCH---
WP_023805904.1 356469 354828 - 546NO PFAM MATCH---
WP_023805905.1 356995 360502 + 1168PF00271
PF13020
PF00176
PF04851
PF00270
Helicase_C
NOV_C
SNF2-rel_dom
ResIII
DEAD
Helicase conserved C-terminal domain
Protein NO VEIN, C-terminal
SNF2-related domain
Type III restriction enzyme, res subunit
DEAD/DEAH box helicase
2.80E-17
1.70E-15
2.20E-14
1.30E-11
7.00E-07

Results for WP_023828040.1 [Mesorhizobium sp. L103C120A0] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018241018.1 0 107 + 35INFERRED GENE---
WP_023828035.1 128 602 + 157PF04191
PF04140
PEMT
ICMT
Phospholipid methyltransferase
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
7.10E-14
2.50E-06
WP_023828036.1 2198 1010 - 395PF12686DUF3800Protein of unknown function (DUF3800)1.20E-09
WP_050590913.1 2903 3905 + 333NO PFAM MATCH---
WP_023828038.1 5578 4243 - 444NO PFAM MATCH---
WP_023828039.1 6291 5577 - 237PF07812TfuATfuA-like protein5.80E-40
WP_023828040.1 7541 6287 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-43
WP_023828041.1 8079 7545 - 177NO PFAM MATCH---
WP_081730883.1 10050 8100 - 649PF13424
PF07719
PF03704
PF00515
PF14559
TPR_12
TPR_2
BTAD
TPR_1
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
2.60E-10
5.50E-10
1.80E-08
3.70E-07
8.40E-05
WP_023828043.1 10658 19427 + 2922NO PFAM MATCH---
WP_210164034.1 19570 24973 + 1800NO PFAM MATCH---
WP_031202583.1 25025 25568 + 180PF14521Aspzincin_M35Lysine-specific metallo-endopeptidase1.80E-09
WP_023828046.1 25743 25977 + 77PF02416TatA_B_EmttA/Hcf106 family1.70E-08
WP_081730885.1 26087 27737 + 549PF14356DUF4403Domain of unknown function (DUF4403)1.80E-39
WP_023828048.1 28425 27756 - 222NO PFAM MATCH---

Results for WP_000194821.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_262944308.1 74735 72470 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
9.00E-14
5.00E-07
WP_000167332.1 75249 74964 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 77078 75404 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 77875 77191 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 78809 78047 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_020898601.1 80235 78951 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-149
WP_020898600.1 81394 80305 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 82272 81579 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000194821.1 82408 84169 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-82
3.30E-65
WP_000642539.1 84573 85431 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 85490 87773 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_020898599.1 88804 87844 - 319PF11047SopDSalmonella outer protein D5.90E-178
NP_459946.1 88991 89272 + 93INFERRED GENE---
WP_000067928.1 89390 90188 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 91902 90480 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 93268 92119 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023217513.1 94481 93617 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.30E-118

Results for WP_024012686.1 [Pseudomonas moraviensis R28-S] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024012679.1 2508634 2507848 - 261PF14581
PF07179
SseB_C
SseB
SseB protein C-terminal domain
SseB protein N-terminal domain
4.00E-33
7.00E-22
WP_024012680.1 2510999 2508872 - 708PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.80E-26
7.10E-10
WP_024012681.1 2511189 2512005 + 271PF03976PPK2Polyphosphate kinase 2 (PPK2)5.70E-94
WP_016774424.1 2512619 2512835 + 71NO PFAM MATCH---
WP_024012682.1 2512858 2513248 + 129PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
1.10E-05
1.00E-04
WP_024012683.1 2513251 2514625 + 457PF01654Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I9.50E-144
WP_024012684.1 2514637 2515639 + 333PF02322Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II5.00E-79
WP_024012685.1 2518252 2515642 - 869PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
8.50E-72
4.50E-48
4.60E-13
1.20E-09
5.00E-07
WP_024012686.1 2518472 2520677 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.80E-73
1.60E-70
7.90E-08
WP_024012687.1 2521387 2520892 - 164NO PFAM MATCH---
WP_024012688.1 2522553 2521395 - 385PF00990GGDEFDiguanylate cyclase, GGDEF domain3.10E-36
WP_024012689.1 2522907 2522658 - 82NO PFAM MATCH---
WP_051600691.1 2523074 2523716 + 213PF13230GATase_4Glutamine amidotransferases class-II8.50E-05
WP_024012691.1 2523802 2524144 + 113NO PFAM MATCH---
WP_024012692.1 2525846 2524889 - 318PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2.60E-42
8.60E-21
WP_024012693.1 2526636 2525877 - 252PF00106
PF13561
PF08659
PF08643
adh_short
adh_short_C2
KR
DUF1776
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
Fungal family of unknown function (DUF1776)
1.70E-50
4.70E-41
1.20E-11
1.30E-04
WP_024012694.1 2527363 2526670 - 230PF01557FAA_hydrolaseFumarylacetoacetate (FAA) hydrolase family4.60E-48

Results for WP_024087295.1 [Pseudomonas sp. CES] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013973005.1 1362 18 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
3.20E-24
1.10E-22
WP_013973004.1 3629 1379 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
2.80E-33
7.70E-31
WP_003259224.1 4084 3628 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-22
3.80E-08
4.70E-05
WP_024087295.1 4473 6660 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-73
5.30E-72
4.70E-08
WP_024087294.1 6875 7688 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
3.90E-23
2.90E-22
3.60E-16
1.80E-14
2.10E-09
WP_003260568.1 8005 7705 - 99PF13827DUF4189Domain of unknown function (DUF4189)6.90E-05
WP_024087293.1 10355 8225 - 709PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-55
1.90E-23
WP_013973000.1 10583 11165 + 193NO PFAM MATCH---
WP_023661742.1 11574 12093 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ4.10E-39
WP_013972998.1 13002 12093 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-26
9.20E-16
WP_013972997.1 13454 14429 + 324PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
4.70E-20
3.00E-18
8.40E-08
WP_024087292.1 14470 15370 + 299PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.80E-40
3.30E-07

Results for WP_024091768.1 [Leisingera methylohalidivorans DSM 14336] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024091759.1 3533230 3531541 - 562PF01512
PF01257
PF10589
PF10531
Complex1_51K
2Fe-2S_thioredx
NADH_4Fe-4S
SLBB
Respiratory-chain NADH dehydrogenase 51 Kd subunit
Thioredoxin-like [2Fe-2S] ferredoxin
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SLBB domain
4.60E-44
3.60E-31
3.60E-21
2.50E-10
WP_024091760.1 3534234 3533325 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.20E-29
7.90E-17
WP_245602915.1 3534707 3534287 - 139PF13463
PF12840
HTH_27
HTH_20
Winged helix DNA-binding domain
Helix-turn-helix domain
7.90E-10
5.80E-04
WP_024091763.1 3536004 3536655 + 216PF13302
PF13420
PF00583
Acetyltransf_3
Acetyltransf_4
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
4.10E-16
1.30E-11
4.60E-10
WP_024091764.1 3536726 3538499 + 590PF13414
PF00515
PF00211
PF07719
PF13428
TPR_11
TPR_1
Guanylate_cyc
TPR_2
TPR_14
TPR repeat
Tetratricopeptide repeat
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
Tetratricopeptide repeat
9.60E-15
4.80E-13
6.60E-13
7.60E-13
1.30E-10
WP_024091765.1 3539400 3538575 - 274NO PFAM MATCH---
WP_024091766.1 3540846 3539547 - 432NO PFAM MATCH---
WP_245602916.1 3542172 3540888 - 427PF07812TfuATfuA-like protein2.00E-47
WP_024091768.1 3543428 3542222 - 401PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-80
WP_024091769.1 3544624 3543571 - 350PF13407
PF00532
Peripla_BP_4
Peripla_BP_1
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
1.70E-25
4.70E-25
WP_024091770.1 3544716 3547644 + 975PF02518
PF00072
PF00512
PF00672
PF01627
HATPase_c
Response_reg
HisKA
HAMP
Hpt
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
HAMP domain
Hpt domain
1.00E-24
2.10E-24
5.00E-17
1.80E-08
1.40E-06
WP_024091771.1 3548317 3547624 - 230PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
4.30E-27
3.20E-23
WP_024091772.1 3548503 3549451 + 315PF04069OpuACSubstrate binding domain of ABC-type glycine betaine transport system7.60E-47
WP_024091773.1 3549519 3550551 + 343PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
4.10E-31
5.30E-06
WP_024091774.1 3550547 3552512 + 654PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.00E-38
WP_052348739.1 3552516 3553557 + 346PF12833
PF00165
PF01965
HTH_18
HTH_AraC
DJ-1_PfpI
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
DJ-1/PfpI family
1.50E-21
5.20E-15
7.60E-10
WP_076611905.1 3554290 3554763 + 157INFERRED GENE---

Results for WP_025338816.1 [Pseudomonas sp. FGI182] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025338810.1 2488254 2488572 + 105NO PFAM MATCH---
WP_012271937.1 2488580 2488781 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_025338811.1 2488831 2489473 + 213PF01810LysELysE type translocator5.90E-30
WP_025338812.1 2489639 2490428 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
1.50E-25
4.50E-04
WP_025338813.1 2491580 2490560 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
9.70E-36
1.00E-22
WP_025338814.1 2493008 2491664 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
4.60E-24
7.40E-22
WP_025338815.1 2495275 2493025 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
2.80E-33
1.40E-30
WP_003259224.1 2495730 2495274 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-22
3.80E-08
4.70E-05
WP_025338816.1 2496119 2498306 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-73
6.80E-72
4.70E-08
WP_025338817.1 2498595 2499408 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
3.60E-22
1.10E-21
9.70E-16
2.40E-13
1.60E-09
WP_025338818.1 2499725 2499425 - 99PF13827DUF4189Domain of unknown function (DUF4189)6.90E-05
WP_025338819.1 2502019 2499886 - 710PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.70E-56
2.00E-23
WP_025338820.1 2502244 2502826 + 193NO PFAM MATCH---
WP_025338821.1 2503595 2502830 - 254PF13646
PF08713
HEAT_2
DNA_alkylation
HEAT repeats
DNA alkylation repair enzyme
6.80E-06
5.30E-05
WP_025338822.1 2503799 2504318 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ1.40E-38
WP_025338823.1 2505227 2504318 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.00E-27
9.30E-16
WP_025338824.1 2505733 2506708 + 324PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
4.70E-20
2.20E-18
8.40E-08

Results for WP_025326751.1 [Aeromonas hydrophila 4AK4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025326743.1 1879735 1878640 - 364PF00005
PF13304
PF08402
PF09818
PF02463
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
TOBE domain
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
2.60E-32
7.90E-08
9.40E-08
4.90E-06
4.90E-05
WP_025326744.1 1881027 1880007 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
2.80E-28
2.50E-19
8.30E-15
3.60E-13
WP_025326745.1 1881854 1881146 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
3.50E-34
1.60E-19
WP_025326746.1 1882083 1883223 + 379PF00266
PF00155
Aminotran_5
Aminotran_1_2
Aminotransferase class-V
Aminotransferase class I and II
2.90E-23
4.60E-04
WP_025326747.1 1883222 1884620 + 465PF00202Aminotran_3Aminotransferase class-III5.40E-75
WP_025326748.1 1884612 1885452 + 279PF00702
PF12710
Hydrolase
HAD
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
7.70E-05
9.30E-04
WP_204356792.1 1887864 1885575 - 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.40E-202
4.70E-43
WP_025326750.1 1888748 1887899 - 282PF01226Form_Nir_transFormate/nitrite transporter1.70E-74
WP_025326751.1 1890890 1889129 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.10E-79
7.60E-65
WP_025326752.1 1891200 1891899 + 232PF03483B3_4B3/4 domain9.70E-19
WP_025326753.1 1892295 1891980 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein4.30E-29
WP_025326754.1 1892624 1893737 + 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.80E-58
1.80E-22
WP_005300025.1 1894084 1893865 - 72PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
3.20E-28
8.60E-04
WP_005325410.1 1894312 1894630 + 105PF02617ClpSATP-dependent Clp protease adaptor protein ClpS2.20E-34
WP_025326755.1 1894690 1896943 + 750PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
1.50E-53
9.60E-29
7.40E-25
1.10E-23
8.30E-21
WP_005300033.1 1897231 1897012 - 72PF01176
PF16745
eIF-1a
RsgA_N
Translation initiation factor 1A / IF-1
RsgA N-terminal domain
2.20E-26
7.90E-04
WP_025326756.1 1898016 1897299 - 238PF04377
PF04376
ATE_C
ATE_N
Arginine-tRNA-protein transferase, C terminus
Arginine-tRNA-protein transferase, N terminus
2.70E-37
3.60E-18

Results for WP_025386059.1 [Legionella oakridgensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_158423038.1 29858 27668 - 729PF00005
PF03412
PF00664
PF13555
PF12385
ABC_tran
Peptidase_C39
ABC_membrane
AAA_29
Peptidase_C70
ABC transporter
Peptidase C39 family
ABC transporter transmembrane region
P-loop containing region of AAA domain
Papain-like cysteine protease AvrRpt2
2.10E-32
1.30E-31
1.10E-29
9.90E-05
1.70E-04
WP_025386051.1 30110 29915 - 64NO PFAM MATCH---
WP_025386052.1 30294 31797 + 500PF13454
PF13738
PF07992
PF13434
PF13450
NAD_binding_9
Pyr_redox_3
Pyr_redox_2
Lys_Orn_oxgnase
NAD_binding_8
FAD-NAD(P)-binding
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
NAD(P)-binding Rossmann-like domain
1.20E-24
5.80E-13
1.30E-11
3.50E-07
7.00E-04
WP_035894929.1 32114 31811 - 100PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)3.40E-09
WP_025386054.1 33017 32114 - 300PF00685
PF13469
Sulfotransfer_1
Sulfotransfer_3
Sulfotransferase domain
Sulfotransferase family
3.70E-27
2.50E-04
WP_025386055.1 33918 33006 - 303NO PFAM MATCH---
WP_051398990.1 35397 33927 - 489PF07812TfuATfuA-like protein2.50E-46
WP_025386058.1 36591 35418 - 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-68
WP_025386059.1 37818 36621 - 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-65
WP_025386060.1 38602 37858 - 247NO PFAM MATCH---
WP_162147860.1 38773 40219 + 481PF07812TfuATfuA-like protein1.90E-42
WP_025386061.1 40267 41368 + 366PF00899
PF00581
PF13241
ThiF
Rhodanese
NAD_binding_7
ThiF family
Rhodanese-like domain
Putative NAD(P)-binding
4.70E-62
5.60E-12
6.30E-04
WP_025386062.1 41494 42055 + 186NO PFAM MATCH---
WP_025386063.1 42485 42113 - 123PF00581RhodaneseRhodanese-like domain7.90E-16
WP_147370121.1 42758 43301 + 180NO PFAM MATCH---
WP_064101338.1 43722 44481 + 252NO PFAM MATCH---
WP_025386067.1 45946 44554 - 463PF00069
PF07714
Pkinase
PK_Tyr_Ser-Thr
Protein kinase domain
Protein tyrosine and serine/threonine kinase
2.90E-15
6.10E-04

Results for WP_025386058.1 [Legionella oakridgensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025386049.1 27619 25891 - 575PF00005
PF00664
PF02463
PF13304
ABC_tran
ABC_membrane
SMC_N
AAA_21
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
6.00E-32
2.40E-20
1.30E-06
9.40E-04
WP_158423038.1 29858 27668 - 729PF00005
PF03412
PF00664
PF13555
PF12385
ABC_tran
Peptidase_C39
ABC_membrane
AAA_29
Peptidase_C70
ABC transporter
Peptidase C39 family
ABC transporter transmembrane region
P-loop containing region of AAA domain
Papain-like cysteine protease AvrRpt2
2.10E-32
1.30E-31
1.10E-29
9.90E-05
1.70E-04
WP_025386051.1 30110 29915 - 64NO PFAM MATCH---
WP_025386052.1 30294 31797 + 500PF13454
PF13738
PF07992
PF13434
PF13450
NAD_binding_9
Pyr_redox_3
Pyr_redox_2
Lys_Orn_oxgnase
NAD_binding_8
FAD-NAD(P)-binding
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
NAD(P)-binding Rossmann-like domain
1.20E-24
5.80E-13
1.30E-11
3.50E-07
7.00E-04
WP_035894929.1 32114 31811 - 100PF05402PqqDCoenzyme PQQ synthesis protein D (PqqD)3.40E-09
WP_025386054.1 33017 32114 - 300PF00685
PF13469
Sulfotransfer_1
Sulfotransfer_3
Sulfotransferase domain
Sulfotransferase family
3.70E-27
2.50E-04
WP_025386055.1 33918 33006 - 303NO PFAM MATCH---
WP_051398990.1 35397 33927 - 489PF07812TfuATfuA-like protein2.50E-46
WP_025386058.1 36591 35418 - 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-68
WP_025386059.1 37818 36621 - 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-65
WP_025386060.1 38602 37858 - 247NO PFAM MATCH---
WP_162147860.1 38773 40219 + 481PF07812TfuATfuA-like protein1.90E-42
WP_025386061.1 40267 41368 + 366PF00899
PF00581
PF13241
ThiF
Rhodanese
NAD_binding_7
ThiF family
Rhodanese-like domain
Putative NAD(P)-binding
4.70E-62
5.60E-12
6.30E-04
WP_025386062.1 41494 42055 + 186NO PFAM MATCH---
WP_025386063.1 42485 42113 - 123PF00581RhodaneseRhodanese-like domain7.90E-16
WP_147370121.1 42758 43301 + 180NO PFAM MATCH---
WP_064101338.1 43722 44481 + 252NO PFAM MATCH---

Results for WP_032677795.1 back to top

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Couldn't process WP_032677795.1 Genbank filestream. May be corrupt.

Results for YP_008998156.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_006460384.1 [Thiomicrospira aerophila AL3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006460376.1 1106254 1106821 + 188PF01713SmrSmr domain2.00E-20
WP_084332781.1 1107142 1106827 - 104PF04977DivICSeptum formation initiator2.00E-11
WP_006460378.1 1108488 1107201 - 428PF00113
PF03952
PF07476
PF13378
Enolase_C
Enolase_N
MAAL_C
MR_MLE_C
Enolase, C-terminal TIM barrel domain
Enolase, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
Enolase C-terminal domain-like
2.20E-136
3.70E-56
5.20E-06
4.80E-04
WP_006460379.1 1109384 1108544 - 279PF00793DAHP_synth_1DAHP synthetase I family2.60E-69
WP_006460380.1 1111018 1109386 - 543PF06418
PF00117
PF07722
CTP_synth_N
GATase
Peptidase_C26
CTP synthase N-terminus
Glutamine amidotransferase class-I
Peptidase C26
3.20E-125
1.10E-55
7.40E-10
WP_006460381.1 1112396 1111145 - 416PF01171
PF09179
PF11734
ATP_bind_3
TilS
TilS_C
PP-loop family
TilS substrate binding domain
TilS substrate C-terminal domain
4.40E-48
3.90E-15
1.40E-06
WP_006460382.1 1113333 1112376 - 318PF03255
PF01039
ACCA
Carboxyl_trans
Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
Carboxyl transferase domain
4.60E-67
8.00E-21
WP_006460383.1 1113453 1114188 + 244PF04338DUF481Protein of unknown function, DUF4811.30E-47
WP_006460384.1 1115989 1114246 - 580PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.20E-70
3.00E-30
WP_006460385.1 1116135 1116426 + 96NO PFAM MATCH---
WP_006460386.1 1116838 1116391 - 148PF03692CxxCxxCCPutative zinc- or iron-chelating domain7.60E-09
WP_006460387.1 1117528 1116856 - 223PF00849PseudoU_synth_2RNA pseudouridylate synthase1.00E-24
WP_006460388.1 1117622 1118069 + 148PF04344CheZChemotaxis phosphatase, CheZ3.40E-06
WP_006460389.1 1119922 1118152 - 589PF07992
PF02852
PF00364
PF00070
PF13738
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Biotin-requiring enzyme
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
6.40E-62
6.50E-32
3.70E-20
6.70E-20
5.20E-11
WP_006460390.1 1121269 1119937 - 443PF00198
PF00364
PF02817
2-oxoacid_dh
Biotin_lipoyl
E3_binding
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
1.10E-79
2.00E-17
8.40E-13
WP_006460391.1 1123957 1121296 - 886PF17831
PF00456
PDH_E1_M
Transketolase_N
Pyruvate dehydrogenase E1 component middle domain
Transketolase, thiamine diphosphate binding domain
5.10E-108
7.10E-12
WP_006460392.1 1124663 1124174 - 162PF00293NUDIXNUDIX domain1.20E-22

Results for WP_025422808.1 [Sodalis praecaptivus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025422801.1 3040307 3038558 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
4.70E-59
1.90E-35
1.90E-10
8.20E-06
7.60E-05
WP_237234616.1 3042626 3040343 - 760PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
8.30E-49
8.00E-18
1.00E-11
5.80E-04
WP_025422803.1 3044056 3042796 - 419NO PFAM MATCH---
WP_025245364.1 3044643 3044358 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
8.30E-29
1.50E-06
WP_025422804.1 3046412 3044735 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.10E-96
1.50E-11
2.60E-07
WP_025422805.1 3047210 3046526 - 227PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
3.70E-82
5.00E-09
2.70E-05
1.70E-04
1.70E-04
WP_025422806.1 3048625 3047317 - 435PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.80E-140
WP_025422807.1 3050269 3049183 - 361PF00266Aminotran_5Aminotransferase class-V9.60E-62
WP_025422808.1 3050428 3052195 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-82
6.90E-61
WP_025422809.1 3052603 3053461 + 285PF01226Form_Nir_transFormate/nitrite transporter1.70E-74
WP_025422810.1 3053514 3055797 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.90E-208
1.80E-42
WP_025422811.1 3055968 3056709 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-31
7.30E-18
9.60E-06
WP_025422812.1 3056900 3058658 + 585PF06472
PF05992
PF00005
PF00664
PF13191
ABC_membrane_2
SbmA_BacA
ABC_tran
ABC_membrane
AAA_16
ABC transporter transmembrane region 2
SbmA/BacA-like family
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
2.50E-62
1.50E-40
2.70E-19
1.60E-05
1.40E-04
WP_025422813.1 3060069 3058923 - 381PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
4.10E-34
3.90E-11
5.50E-09
1.10E-06
WP_025422814.1 3061533 3060240 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
4.00E-36
1.70E-30
WP_025422815.1 3062997 3061653 - 447PF12002
PF16193
PF00004
PF05496
PF13191
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA ATPase domain
6.70E-64
2.30E-23
4.00E-15
4.30E-13
1.80E-06
WP_025422816.1 3063616 3063004 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.40E-56
1.50E-04

Results for WP_025395594.1 [Rhizobium leguminosarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_222420300.1 1024316 1027319 + 1000PF00535
PF05401
PF01522
PF13641
PF13649
Glycos_transf_2
NodS
Polysacc_deac_1
Glyco_tranf_2_3
Methyltransf_25
Glycosyl transferase family 2
Nodulation protein S (NodS)
Polysaccharide deacetylase
Glycosyltransferase like family 2
Methyltransferase domain
6.10E-29
3.90E-23
1.00E-17
5.40E-15
4.50E-14
WP_222420301.1 1027315 1028389 + 357PF00535
PF10111
PF13641
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
1.30E-33
7.00E-18
4.30E-17
WP_222420302.1 1028381 1030136 + 584PF00005
PF00664
PF02463
PF13191
PF03193
ABC_tran
ABC_membrane
SMC_N
AAA_16
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
RsgA GTPase
1.80E-31
3.20E-13
4.80E-06
7.60E-05
8.60E-05
WP_261332898.1 1030141 1031257 + 371PF00535
PF10111
PF13641
PF13704
PF13506
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family 21
2.20E-35
1.20E-23
1.10E-22
2.90E-05
3.20E-04
WP_003542083.1 1032582 1032789 + 68NO PFAM MATCH---
WP_222420303.1 1032849 1033089 + 79NO PFAM MATCH---
WP_025395592.1 1033457 1033208 - 82NO PFAM MATCH---
WP_222420304.1 1034268 1033560 - 235PF07812TfuATfuA-like protein3.20E-42
WP_025395594.1 1035473 1034264 - 402PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.10E-62
WP_025395595.1 1035728 1035515 - 70NO PFAM MATCH---
WP_261332899.1 1037587 1035748 - 612PF14559
PF13414
TPR_19
TPR_11
Tetratricopeptide repeat
TPR repeat
6.00E-04
6.10E-04
WP_017961650.1 1038031 1037605 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
3.60E-12
5.90E-08
2.00E-07
1.60E-04
WP_222420403.1 1038630 1038240 - 129NO PFAM MATCH---
WP_222420396.1 1038526 1039417 + 296PF19495DUF6030Family of unknown function (DUF6030)4.70E-61
WP_222420306.1 1039889 1039448 - 146NO PFAM MATCH---
WP_222420307.1 1040026 1041100 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 106.20E-68
WP_222420397.1 1041131 1042283 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
1.60E-28
1.60E-24
1.90E-12
1.00E-08
4.00E-06

Results for WP_025397652.1 [Rhizobium leguminosarum bv. trifolii WSM1689] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025397645.1 272697 270117 - 859PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
4.20E-31
6.10E-27
WP_025397646.1 274197 272919 - 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
2.30E-59
1.20E-04
3.80E-04
WP_025397647.1 275026 274291 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
1.10E-55
4.60E-43
1.50E-05
2.90E-05
WP_025397648.1 275479 276265 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
3.10E-13
3.10E-11
4.10E-08
1.80E-06
5.50E-05
WP_025397649.1 276338 277175 + 278PF04909Amidohydro_2Amidohydrolase6.10E-42
WP_025397650.1 277377 277782 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.40E-11
6.70E-07
3.40E-06
WP_020052848.1 278130 277863 - 88NO PFAM MATCH---
WP_025397651.1 278940 278196 - 247PF07812TfuATfuA-like protein3.80E-39
WP_025397652.1 280199 278936 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-67
WP_165504093.1 280356 280212 - 47NO PFAM MATCH---
WP_025397653.1 282454 280462 - 663PF03704
PF07719
PF13428
PF13424
PF00515
BTAD
TPR_2
TPR_14
TPR_12
TPR_1
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.00E-13
5.10E-12
3.10E-10
9.00E-10
3.20E-09
WP_025397654.1 283885 282988 - 298PF01729
PF02749
QRPTase_C
QRPTase_N
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
2.00E-60
2.10E-27
WP_025397655.1 285404 283862 - 513PF00890
PF01266
PF02910
PF00732
FAD_binding_2
DAO
Succ_DH_flav_C
GMC_oxred_N
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
GMC oxidoreductase
1.60E-78
2.40E-06
8.30E-05
1.80E-04
WP_025397656.1 286372 285400 - 323PF02445NadAQuinolinate synthetase A protein1.40E-112
WP_025397657.1 287440 286441 - 332PF19368AraR_CAraR C-terminal winged HTH domain4.30E-07
WP_025397658.1 288285 287469 - 271PF02548Pantoate_transfKetopantoate hydroxymethyltransferase2.80E-42
WP_025397659.1 289538 288311 - 408PF07992
PF14759
PF00070
PF01266
PF13738
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
2.50E-64
6.70E-21
6.70E-19
1.70E-07
8.20E-05

Results for WP_049953040.1 [Halostagnicola larsenii XH-48] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049953033.1 1773940 1774381 + 146PF19101DUF5788Family of unknown function (DUF5788)6.90E-59
WP_049953034.1 1774432 1776184 + 583PF14791
PF14716
PF02811
PF14520
PF12826
DNA_pol_B_thumb
HHH_8
PHP
HHH_5
HHH_2
DNA polymerase beta thumb
Helix-hairpin-helix domain
PHP domain
Helix-hairpin-helix domain
Helix-hairpin-helix motif
8.80E-23
4.60E-18
2.90E-13
6.50E-13
1.90E-05
WP_174887907.1 1777105 1776331 - 257PF13263PHP_CPHP-associated3.00E-15
WP_049953036.1 1777210 1777498 + 95NO PFAM MATCH---
WP_004217006.1 1777644 1777713 + 23INFERRED GENE---
WP_049953037.1 1778259 1777821 - 145PF03439
PF00467
Spt5-NGN
KOW
Early transcription elongation factor of RNA pol II, NGN section
KOW motif
1.60E-23
8.10E-08
WP_049953038.1 1778438 1778258 - 59NO PFAM MATCH---
WP_049953039.1 1778671 1778857 + 61NO PFAM MATCH---
WP_049953040.1 1778949 1780701 + 583PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-49
WP_049953041.1 1781269 1780804 - 154NO PFAM MATCH---
WP_049953042.1 1781591 1783100 + 502PF00171AldedhAldehyde dehydrogenase family6.40E-156
WP_049953043.1 1783187 1783667 + 159PF07883
PF05899
PF02311
Cupin_2
Cupin_3
AraC_binding
Cupin domain
EutQ-like cupin domain
AraC-like ligand binding domain
4.40E-12
3.40E-05
6.20E-04
WP_049953044.1 1785292 1783789 - 500PF00478
PF00571
PF03060
PF01070
PF01180
IMPDH
CBS
NMO
FMN_dh
DHO_dh
IMP dehydrogenase / GMP reductase domain
CBS domain
Nitronate monooxygenase
FMN-dependent dehydrogenase
Dihydroorotate dehydrogenase
8.10E-139
2.60E-23
2.70E-14
1.20E-08
7.30E-05
WP_049953045.1 1785763 1786660 + 298PF19107DUF5794Family of unknown function (DUF5794)1.40E-52
WP_049953046.1 1787068 1787395 + 108NO PFAM MATCH---
WP_007259236.1 1788094 1789084 + 330INFERRED GENE---
WP_049953047.1 1789536 1790043 + 168NO PFAM MATCH---

Results for WP_009760898.1 [Halobacterium sp. DL1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009760906.1 1995653 1995002 - 216PF04967HTH_10HTH DNA binding domain4.20E-15
WP_009760905.1 1995792 1996614 + 273PF19673DUF6176Family of unknown function (DUF6176)5.60E-07
WP_009760904.1 1996656 1997400 + 247PF12706
PF00753
PF13483
Lactamase_B_2
Lactamase_B
Lactamase_B_3
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.10E-17
1.80E-12
3.20E-04
WP_009760903.1 1997521 1997716 + 64NO PFAM MATCH---
WP_009760902.1 1998842 1997771 - 356PF03463
PF03465
PF03464
eRF1_1
eRF1_3
eRF1_2
eRF1 domain 1
eRF1 domain 3
eRF1 domain 2
6.40E-30
8.10E-25
4.10E-08
WP_009760901.1 2001487 1999249 - 745PF05833
PF05670
NFACT_N
NFACT-R_1
NFACT N-terminal and middle domains
NFACT protein RNA binding domain
2.80E-81
1.20E-23
WP_009760900.1 2002364 2001557 - 268PF02535ZipZIP Zinc transporter1.10E-16
WP_009760899.1 2002479 2003253 + 257PF01975SurESurvival protein SurE7.30E-49
WP_009760898.1 2005287 2003589 - 565PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.90E-50
WP_009760897.1 2006184 2005365 - 272PF19138DUF5821Family of unknown function (DUF5821)6.50E-96
WP_009760896.1 2008323 2006259 - 687NO PFAM MATCH---
WP_009760895.1 2008437 2009685 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.10E-149
3.20E-07
6.30E-06
WP_009760894.1 2010744 2009706 - 345PF00174Oxidored_molybOxidoreductase molybdopterin binding domain2.40E-28
WP_009760893.1 2010890 2011784 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.10E-67
3.90E-34
WP_009760892.1 2012568 2011863 - 234NO PFAM MATCH---
WP_009760891.1 2013559 2012611 - 315PF10103Zincin_2Zincin-like metallopeptidase2.20E-61
WP_009760890.1 2013851 2013599 - 83NO PFAM MATCH---

Results for WP_025374103.1 [Advenella mimigardefordensis DPN7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025374095.1 3854686 3853153 - 510PF07690MFS_1Major Facilitator Superfamily9.00E-24
WP_025374096.1 3855825 3854688 - 378PF16576
PF13437
PF00529
PF13533
PF00364
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Cation efflux system protein CusB domain 1
Biotin-lipoyl like
Biotin-requiring enzyme
7.50E-20
2.30E-17
5.00E-09
9.60E-06
3.70E-04
WP_025374097.1 3855969 3856626 + 218PF02909
PF00440
TetR_C_1
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
3.80E-25
1.80E-12
WP_025374098.1 3856641 3857013 + 123NO PFAM MATCH---
WP_042070514.1 3857214 3857694 + 159PF05656DUF805Protein of unknown function (DUF805)4.20E-23
WP_025374100.1 3858505 3857815 - 229PF00149
PF12850
Metallophos
Metallophos_2
Calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase superfamily domain
4.90E-11
7.00E-06
WP_025374101.1 3859429 3858838 - 196NO PFAM MATCH---
WP_144084678.1 3861091 3859879 - 403NO PFAM MATCH---
WP_025374103.1 3862013 3861059 - 317PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.40E-09
WP_025374104.1 3863111 3862043 - 355NO PFAM MATCH---
WP_052342337.1 3864518 3863615 - 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-22
2.20E-15
WP_025374106.1 3864856 3865705 + 282PF03756AfsAA-factor biosynthesis hotdog domain6.10E-16
WP_144084679.1 3865719 3867114 + 464PF01494
PF01266
PF07992
PF13450
PF00890
FAD_binding_3
DAO
Pyr_redox_2
NAD_binding_8
FAD_binding_2
FAD binding domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD binding domain
2.10E-50
1.40E-08
7.20E-06
5.80E-05
1.60E-04
WP_025374108.1 3867104 3868049 + 314PF08541
PF08545
ACP_syn_III_C
ACP_syn_III
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
1.60E-10
6.40E-06
WP_025374109.1 3868048 3868702 + 217PF12710
PF08282
PF00702
HAD
Hydrolase_3
Hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.50E-24
2.30E-06
3.40E-05
WP_025374110.1 3868698 3869904 + 401PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
1.40E-38
2.40E-15
WP_025374111.1 3869924 3870995 + 356PF00248Aldo_ket_redAldo/keto reductase family1.10E-62

Results for WP_025217643.1 [Mannheimia varigena USDA-ARS-USMARC-1296] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025217636.1 1500828 1500156 - 223PF01930
PF12705
Cas_Cas4
PDDEXK_1
Domain of unknown function DUF83
PD-(D/E)XK nuclease superfamily
9.40E-36
1.80E-06
WP_025217637.1 1501691 1500827 - 287PF05107Cas_Cas7CRISPR-associated protein Cas73.90E-113
WP_025217638.1 1503479 1501700 - 592PF09709Cas_Csd1CRISPR-associated protein (Cas_Csd1)4.70E-187
WP_025217639.1 1504153 1503475 - 225PF09704Cas_Cas5dCRISPR-associated protein (Cas_Cas5)1.10E-40
WP_025217640.1 1505209 1504345 - 287PF18184
PF18181
PF14015
SLATT_3
SLATT_1
DUF4231
SMODS and SLOG-associating 2TM effector domain 3
SMODS and SLOG-associating 2TM effector domain 1
Protein of unknown function (DUF4231)
9.60E-41
3.70E-36
1.00E-14
WP_244148350.1 1505569 1505218 - 116PF08937DUF1863MTH538 TIR-like domain (DUF1863)6.90E-11
WP_025217641.1 1506118 1505713 - 134PF08937
PF13676
DUF1863
TIR_2
MTH538 TIR-like domain (DUF1863)
TIR domain
5.30E-16
1.70E-06
WP_025217642.1 1508539 1506250 - 762PF00270
PF04851
PF01966
PF02562
PF00176
DEAD
ResIII
HD
PhoH
SNF2-rel_dom
DEAD/DEAH box helicase
Type III restriction enzyme, res subunit
HD domain
PhoH-like protein
SNF2-related domain
1.20E-11
2.00E-10
1.60E-07
7.00E-06
3.20E-05
WP_025217643.1 1508718 1510482 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.30E-75
2.80E-64
WP_025217644.1 1510560 1511523 + 320PF08003
PF13489
PF13847
PF08241
PF13649
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_11
Methyltransf_25
Protein of unknown function (DUF1698)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.40E-166
2.00E-10
5.70E-10
6.80E-07
3.10E-06
WP_025217645.1 1512481 1511593 - 295PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.30E-39
1.40E-16
WP_025217646.1 1513514 1512482 - 343PF01075Glyco_transf_9Glycosyltransferase family 9 (heptosyltransferase)9.60E-12
WP_025217647.1 1513562 1514606 + 347PF01075Glyco_transf_9Glycosyltransferase family 9 (heptosyltransferase)5.50E-08
WP_006249284.1 1514876 1514663 - 70PF01197Ribosomal_L31Ribosomal protein L312.20E-32
WP_025217648.1 1515246 1517253 + 668PF00456
PF02779
PF02780
PF13292
Transketolase_N
Transket_pyr
Transketolase_C
DXP_synthase_N
Transketolase, thiamine diphosphate binding domain
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
1-deoxy-D-xylulose-5-phosphate synthase
4.70E-170
3.50E-48
1.20E-19
1.30E-07
WP_025217649.1 1518453 1517382 - 356PF02562
PF13604
PF13245
PhoH
AAA_30
AAA_19
PhoH-like protein
AAA domain
AAA domain
4.30E-93
6.80E-09
5.90E-05
WP_025217650.1 1519191 1518465 - 241PF07840
PF00392
PF13545
PF01978
PF07729
FadR_C
GntR
HTH_Crp_2
TrmB
FCD
FadR C-terminal domain
Bacterial regulatory proteins, gntR family
Crp-like helix-turn-helix domain
Sugar-specific transcriptional regulator TrmB
FCD domain
2.50E-56
8.60E-19
2.40E-06
3.60E-05
2.10E-04

Results for WP_025289259.1 [Bibersteinia trehalosi USDA-ARS-USMARC-190] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025289257.1 1057526 1058450 + 307PF01171ATP_bind_3PP-loop family1.90E-15
WP_025267118.1 1058737 1060108 + 456PF03553
PF13726
PF03600
PF03606
Na_H_antiporter
Na_H_antiport_2
CitMHS
DcuC
Na+/H+ antiporter family
Na+-H+ antiporter family
Citrate transporter
C4-dicarboxylate anaerobic carrier
3.50E-66
8.70E-23
5.30E-12
4.50E-04
WP_025267117.1 1060172 1060976 + 267PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.30E-23
WP_025289258.1 1061146 1061620 + 157PF04074DUF386YhcH/YjgK/YiaL8.50E-34
WP_025267115.1 1061620 1062487 + 288PF01418
PF01380
PF13580
HTH_6
SIS
SIS_2
Helix-turn-helix domain, rpiR family
SIS domain
SIS domain
6.50E-25
2.70E-24
1.50E-10
WP_015432375.1 1062564 1063446 + 293PF00701DHDPSDihydrodipicolinate synthetase family4.60E-99
WP_025267114.1 1063634 1063958 + 107PF03840SecGPreprotein translocase SecG subunit1.00E-19
WP_015432378.1 1064108 1065118 + 336INFERRED GENE---
WP_025289259.1 1066918 1065154 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.90E-78
2.00E-63
WP_015432380.1 1067210 1069337 + 708PF13597
PF01228
PF03477
NRDD
Gly_radical
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
Glycine radical
ATP cone domain
1.30E-181
1.50E-27
4.00E-22
WP_015432381.1 1069349 1069829 + 159PF13353
PF13394
Fer4_12
Fer4_14
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.00E-50
2.20E-34
WP_015432382.1 1069923 1071399 + 491PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.30E-101
7.70E-06
WP_025267112.1 1071583 1072621 + 345PF13416
PF01547
PF13343
PF13531
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.90E-40
3.20E-30
1.40E-29
4.80E-10
WP_025289260.1 1073515 1072909 - 201PF08239SH3_3Bacterial SH3 domain2.70E-08
WP_025267111.1 1074858 1073595 - 420PF01384PHO4Phosphate transporter family1.70E-109
WP_015432386.1 1075550 1074869 - 226PF01865PhoU_divProtein of unknown function DUF472.40E-66
WP_025289261.1 1075804 1076788 + 327PF01409
PF02912
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA synthetases class II core domain (F)
Aminoacyl tRNA synthetase class II, N-terminal domain
8.70E-103
1.60E-26

Results for WP_041096184.1 [Sulfuritalea hydrogenivorans sk43H] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041096168.1 53981 52556 - 474PF00158
PF14532
PF00072
PF02954
PF07728
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Sigma-54 interaction domain
Sigma-54 interaction domain
Response regulator receiver domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
1.30E-68
1.90E-26
7.90E-24
3.60E-12
9.10E-08
WP_041096170.1 55167 54087 - 359PF02518
PF00512
PF00989
PF08448
PF13426
HATPase_c
HisKA
PAS
PAS_4
PAS_9
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS fold
PAS fold
PAS domain
2.10E-18
3.60E-15
2.70E-08
9.40E-08
1.30E-06
WP_041096172.1 55663 55222 - 146PF13511DUF4124Domain of unknown function (DUF4124)1.60E-07
WP_041096173.1 57173 55763 - 469PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
5.60E-140
2.20E-28
WP_041096175.1 58522 57352 - 389PF01545
PF16916
Cation_efflux
ZT_dimer
Cation efflux family
Dimerisation domain of Zinc Transporter
1.40E-39
1.40E-21
WP_041096177.1 58607 59060 + 150PF00581RhodaneseRhodanese-like domain7.40E-10
WP_041096180.1 59071 60169 + 365PF02445NadAQuinolinate synthetase A protein4.90E-107
WP_041096182.1 61534 60196 - 445PF08668HDODHDOD domain9.70E-14
WP_041096184.1 61722 63435 + 570PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.90E-83
2.60E-37
WP_041096186.1 63477 64242 + 254PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.60E-17
WP_052472979.1 64238 65432 + 397PF13091
PF00614
PF11495
PLDc_2
PLDc
Regulator_TrmB
PLD-like domain
Phospholipase D Active site motif
Archaeal transcriptional regulator TrmB
3.30E-41
1.00E-10
6.70E-04
WP_052472981.1 65509 67255 + 581PF00656
PF13098
Peptidase_C14
Thioredoxin_2
Caspase domain
Thioredoxin-like domain
7.10E-39
7.40E-12
WP_041096188.1 68017 67288 - 242PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
2.30E-32
2.30E-08
1.00E-07
3.90E-04
5.40E-04
WP_041096190.1 68797 68134 - 220PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.90E-19
WP_041096191.1 69536 68798 - 245PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.70E-19
WP_041096193.1 70481 69578 - 300PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 32.20E-47
WP_041101295.1 72329 70496 - 610PF00664
PF00005
PF02463
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.60E-42
1.40E-34
3.80E-08
3.20E-05

Results for WP_038497668.1 [Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038497657.1 68563 67648 - 304PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.10E-33
5.50E-16
WP_038497658.1 68691 69273 + 193PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
1.30E-26
2.10E-05
WP_038497659.1 69353 70337 + 327PF08908MesXPutative oxygenase MesX5.60E-189
WP_038497660.1 70365 71394 + 342PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
2.20E-38
1.60E-04
WP_038497661.1 71974 71533 - 146PF12680SnoaL_2SnoaL-like domain3.00E-06
WP_038497663.1 74038 72016 - 673PF00724
PF07992
PF13450
PF03486
PF00070
Oxidored_FMN
Pyr_redox_2
NAD_binding_8
HI0933_like
Pyr_redox
NADH:flavin oxidoreductase / NADH oxidase family
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
4.80E-90
1.10E-27
1.30E-09
1.10E-06
1.30E-06
WP_038497664.1 74186 74810 + 207PF13305
PF00440
TetR_C_33
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.90E-15
7.40E-10
WP_038497666.1 75318 75828 + 169PF11066DUF2867Protein of unknown function (DUF2867)2.00E-31
WP_038497668.1 78188 75989 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.10E-71
6.30E-71
2.50E-08
WP_038501026.1 79475 78539 - 311PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
4.60E-25
2.20E-16
5.40E-12
WP_051781301.1 80542 79576 - 321PF00111Fer22Fe-2S iron-sulfur cluster binding domain7.90E-07
WP_038497672.1 81481 80551 - 309PF01243Putative_PNPOxPyridoxamine 5'-phosphate oxidase7.70E-17
WP_038497674.1 81616 82552 + 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.50E-38
1.50E-21
WP_038497676.1 82654 83026 + 123PF02635DrsEDsrE/DsrF-like family2.30E-07
WP_004540838.1 83086 83251 + 55INFERRED GENE---
WP_156484100.1 83788 83932 + 47PF19409Thiopep_preThiopeptide-type bacteriocin precursor7.80E-12
WP_144241634.1 84096 85719 + 540NO PFAM MATCH---

Results for WP_038497684.1 [Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038501026.1 79475 78539 - 311PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
4.60E-25
2.20E-16
5.40E-12
WP_051781301.1 80542 79576 - 321PF00111Fer22Fe-2S iron-sulfur cluster binding domain7.90E-07
WP_038497672.1 81481 80551 - 309PF01243Putative_PNPOxPyridoxamine 5'-phosphate oxidase7.70E-17
WP_038497674.1 81616 82552 + 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.50E-38
1.50E-21
WP_038497676.1 82654 83026 + 123PF02635DrsEDsrE/DsrF-like family2.30E-07
WP_004540838.1 83086 83251 + 55INFERRED GENE---
WP_156484100.1 83788 83932 + 47PF19409Thiopep_preThiopeptide-type bacteriocin precursor7.80E-12
WP_144241634.1 84096 85719 + 540NO PFAM MATCH---
WP_038497684.1 85715 87416 + 566PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-56
WP_038497687.1 87423 88662 + 412NO PFAM MATCH---
WP_051781302.1 88658 91151 + 830PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.60E-15
WP_038497693.1 91161 92577 + 471PF01554MatEMatE1.80E-16
WP_051781303.1 92573 93704 + 376PF00107
PF08240
PF13602
ADH_zinc_N
ADH_N
ADH_zinc_N_2
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
8.10E-08
1.70E-05
2.50E-04
WP_038497696.1 93700 94222 + 173NO PFAM MATCH---
WP_038497698.1 94261 94798 + 178NO PFAM MATCH---
WP_038497701.1 94794 95670 + 291PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.30E-32
WP_038497704.1 95666 96788 + 373NO PFAM MATCH---

Results for WP_038237195.1 [Xenorhabdus szentirmaii DSM 16338] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_099139160.1 559339 562768 + 1142PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
7.60E-76
1.70E-43
1.10E-28
1.50E-26
1.10E-05
WP_038237181.1 562856 563468 + 203PF03548LolAOuter membrane lipoprotein carrier protein LolA6.30E-57
WP_038237183.1 563475 564819 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.40E-64
3.60E-23
6.00E-16
2.30E-14
2.10E-06
WP_038237185.1 564922 566212 + 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.10E-36
1.30E-30
WP_038237187.1 567236 566390 - 281NO PFAM MATCH---
WP_038237189.1 568447 567706 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.40E-29
1.00E-17
2.00E-05
WP_038237191.1 570850 568567 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.10E-205
2.50E-43
WP_038237193.1 571762 570904 - 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-73
WP_038237195.1 573844 572080 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-81
1.20E-67
WP_038237196.1 573991 575035 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
6.20E-58
1.10E-25
WP_038237198.1 575800 576889 + 362PF00266Aminotran_5Aminotransferase class-V2.80E-65
WP_038237200.1 576982 578269 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.90E-148
WP_038237203.1 578495 579182 + 228PF02224
PF13189
PF13671
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
1.30E-80
1.80E-06
5.80E-05
1.30E-04
1.50E-04
WP_038237205.1 579374 581048 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-96
5.90E-11
5.30E-06
WP_038237207.1 581123 581414 + 96PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.30E-29
3.50E-08
WP_038237209.1 581731 584068 + 778PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.20E-46
3.10E-16
7.90E-08
WP_038237306.1 584102 585851 + 582PF00664
PF00005
PF02463
PF13191
PF03193
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
RsgA GTPase
3.60E-60
3.10E-35
1.50E-10
1.10E-05
9.60E-05

Results for WP_038269274.1 [Xenorhabdus cabanillasii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_115827343.1 4017872 4015466 - 801PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
5.10E-47
4.40E-21
5.20E-06
3.40E-05
WP_038269281.1 4018397 4018106 - 96PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.50E-29
3.30E-08
WP_038269280.1 4020144 4018470 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-98
2.40E-11
1.60E-05
WP_038269279.1 4021025 4020338 - 228PF02224
PF13189
PF13671
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
1.70E-79
1.10E-06
4.60E-05
7.30E-05
1.10E-04
WP_115827344.1 4022533 4021249 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-144
WP_038269277.1 4023721 4022632 - 362PF00266Aminotran_5Aminotransferase class-V9.00E-64
WP_115827345.1 4024087 4027144 + 1018PF00501
PF07993
PF01370
PF00550
PF01073
AMP-binding
NAD_binding_4
Epimerase
PP-binding
3Beta_HSD
AMP-binding enzyme
Male sterility protein
NAD dependent epimerase/dehydratase family
Phosphopantetheine attachment site
3-beta hydroxysteroid dehydrogenase/isomerase family
1.40E-79
1.30E-59
3.60E-14
1.80E-10
2.00E-08
WP_115827346.1 4028254 4027210 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
2.80E-58
1.40E-25
WP_038269274.1 4028403 4030173 + 589PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.80E-82
6.40E-66
WP_115827347.1 4030498 4031350 + 283PF01226Form_Nir_transFormate/nitrite transporter9.60E-75
WP_115827348.1 4031413 4033696 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.50E-205
1.50E-43
WP_115827349.1 4033834 4034575 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-30
5.70E-18
1.20E-05
WP_244922779.1 4035166 4035844 + 225NO PFAM MATCH---
WP_051502334.1 4035994 4036468 + 157PF13551
PF13384
PF13518
HTH_29
HTH_23
HTH_28
Winged helix-turn helix
Homeodomain-like domain
Helix-turn-helix domain
3.10E-11
5.40E-08
7.20E-04
WP_084766466.1 4036461 4036998 + 178PF13358DDE_3DDE superfamily endonuclease2.20E-31
WP_115827350.1 4038558 4037268 - 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.60E-35
1.00E-29
WP_115827351.1 4040064 4038720 - 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
5.50E-65
1.50E-21
8.60E-16
2.70E-14
2.50E-06

Results for WP_021820526.1 [Halomonas huangheensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021820518.1 1393175 1391222 - 650PF09863
PF00294
DUF2090
PfkB
Uncharacterized protein conserved in bacteria (DUF2090)
pfkB family carbohydrate kinase
1.70E-133
1.00E-43
WP_021820519.1 1394078 1393280 - 265PF01261AP_endonuc_2Xylose isomerase-like TIM barrel5.10E-29
WP_021820520.1 1394985 1394130 - 284PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.60E-29
5.70E-09
6.00E-05
3.80E-04
WP_021820521.1 1396117 1394986 - 376PF02653BPD_transp_2Branched-chain amino acid transport system / permease component9.40E-37
WP_021820522.1 1397114 1396175 - 312PF13407
PF00532
PF13458
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein
6.70E-43
8.50E-07
2.30E-05
WP_021820523.1 1397327 1398191 + 287PF01380
PF01418
SIS
HTH_6
SIS domain
Helix-turn-helix domain, rpiR family
1.30E-21
7.50E-10
WP_021820524.1 1398256 1399252 + 331PF02894
PF01408
GFO_IDH_MocA_C
GFO_IDH_MocA
Oxidoreductase family, C-terminal alpha/beta domain
Oxidoreductase family, NAD-binding Rossmann fold
6.50E-23
1.60E-21
WP_021820525.1 1399291 1400095 + 267PF04962KduIKduI/IolB family6.50E-111
WP_021820526.1 1400384 1402571 + 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
9.40E-76
4.70E-72
1.50E-08
WP_021820527.1 1404113 1402685 - 475PF00474SSFSodium:solute symporter family6.90E-33
WP_021820529.1 1405875 1404678 - 398PF01546
PF07687
PF04389
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase family M20/M25/M40
Peptidase dimerisation domain
Peptidase family M28
1.30E-35
6.30E-21
3.10E-04
WP_021820530.1 1406657 1405982 - 224PF06267DUF1028Family of unknown function (DUF1028)1.10E-61
WP_021820531.1 1407076 1406653 - 140PF01042Ribonuc_L-PSPEndoribonuclease L-PSP4.90E-22
WP_021820532.1 1408428 1407075 - 450PF13738
PF07992
PF13434
PF13454
PF01266
Pyr_redox_3
Pyr_redox_2
Lys_Orn_oxgnase
NAD_binding_9
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
FAD-NAD(P)-binding
FAD dependent oxidoreductase
1.10E-30
5.90E-10
1.70E-09
2.70E-07
1.70E-06
WP_155829335.1 1408842 1408677 - 54NO PFAM MATCH---
WP_021820533.1 1408859 1409789 + 309PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
1.90E-41
2.80E-17
6.60E-04
WP_021820534.1 1410078 1411566 + 495PF00171AldedhAldehyde dehydrogenase family2.30E-170

Results for WP_024025335.1 [Marinomonas profundimaris] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024025327.1 132768 132108 - 219PF03006HlyIIIHaemolysin-III related6.00E-35
WP_024025328.1 133983 132888 - 364PF04909Amidohydro_2Amidohydrolase5.40E-10
WP_024025329.1 134842 134077 - 254PF02673BacABacitracin resistance protein BacA1.10E-74
WP_024025330.1 135008 135452 + 147PF13411
PF09278
PF00376
MerR_1
MerR-DNA-bind
MerR
MerR HTH family regulatory protein
MerR, DNA binding
MerR family regulatory protein
9.40E-19
1.10E-15
1.20E-13
WP_024025331.1 136346 135557 - 262PF03502Channel_TsxNucleoside-specific channel-forming protein, Tsx7.50E-87
WP_024025332.1 136926 136755 - 56NO PFAM MATCH---
WP_024025333.1 137255 136934 - 106PF13591
PF13411
MerR_2
MerR_1
MerR HTH family regulatory protein
MerR HTH family regulatory protein
1.10E-24
6.20E-04
WP_024025334.1 138227 137258 - 322PF01556
PF00226
DnaJ_C
DnaJ
DnaJ C terminal domain
DnaJ domain
1.70E-39
2.90E-24
WP_024025335.1 138563 140750 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.80E-71
1.20E-70
2.80E-09
WP_024025336.1 140774 141959 + 394PF11873
PF01464
Mltc_N
SLT
Membrane-bound lytic murein transglycosylase C, N-terminal domain
Transglycosylase SLT domain
6.70E-54
2.20E-29
WP_024025337.1 143466 142128 - 445PF13250
PF10544
PF13455
DUF4041
T5orf172
MUG113
Domain of unknown function (DUF4041)
T5orf172 domain
Meiotically up-regulated gene 113
1.00E-19
6.50E-14
5.60E-13
WP_024025338.1 144301 143527 - 257PF11760
PF01890
CbiG_N
CbiG_C
Cobalamin synthesis G N-terminal
Cobalamin synthesis G C-terminus
2.20E-33
1.00E-30
WP_024025339.1 145038 144297 - 246PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases3.80E-48
WP_235075962.1 146378 145034 - 447PF00590
PF02390
PF09445
PF01189
PF01135
TP_methylase
Methyltransf_4
Methyltransf_15
Methyltr_RsmB-F
PCMT
Tetrapyrrole (Corrin/Porphyrin) Methylases
Putative methyltransferase
RNA cap guanine-N2 methyltransferase
16S rRNA methyltransferase RsmB/F
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
3.10E-16
4.00E-08
2.30E-05
2.80E-05
3.90E-04
WP_024025341.1 147217 146563 - 217PF02570CbiCPrecorrin-8X methylmutase2.50E-68
WP_024025342.1 148008 147213 - 264PF02571CbiJPrecorrin-6x reductase CbiJ/CobK5.80E-49
WP_024025343.1 149144 148004 - 379PF01888CbiDCbiD1.10E-82

Results for WP_024030399.1 [Neobacillus vireti] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024030407.1 322153 320782 - 456PF00171
PF05893
Aldedh
LuxC
Aldehyde dehydrogenase family
Acyl-CoA reductase (LuxC)
8.80E-94
1.70E-05
WP_034724837.1 323377 322177 - 399PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.10E-110
4.80E-20
WP_235815181.1 324318 323634 - 227PF01978
PF01325
TrmB
Fe_dep_repress
Sugar-specific transcriptional regulator TrmB
Iron dependent repressor, N-terminal DNA binding domain
1.80E-05
3.60E-04
WP_024030404.1 324587 324329 - 85PF10752DUF2533Protein of unknown function (DUF2533)2.90E-31
WP_000579369.1 326089 326200 + 37INFERRED GENE---
WP_235815180.1 326571 326811 + 79PF05055DUF677Protein of unknown function (DUF677)1.30E-04
WP_024030401.1 327090 327390 + 99NO PFAM MATCH---
WP_024030400.1 327558 329517 + 652NO PFAM MATCH---
WP_024030399.1 329513 331454 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-83
WP_024030398.1 331477 333058 + 526PF00881NitroreductaseNitroreductase family8.00E-13
WP_024030397.1 333441 333792 + 116PF12681
PF18029
Glyoxalase_2
Glyoxalase_6
Glyoxalase-like domain
Glyoxalase-like domain
1.60E-07
1.70E-04
WP_024030396.1 333979 335068 + 362PF00589
PF13495
PF02899
PF13102
Phage_integrase
Phage_int_SAM_4
Phage_int_SAM_1
Phage_int_SAM_5
Phage integrase family
Phage integrase, N-terminal SAM-like domain
Phage integrase, N-terminal SAM-like domain
Phage integrase SAM-like domain
3.50E-30
6.80E-06
2.50E-05
2.00E-04
WP_024030395.1 335621 335198 - 140PF06713bPH_4Bacterial PH domain1.40E-28
WP_235815183.1 337785 335976 - 602PF00664
PF00005
PF13401
PF13304
PF00004
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA
ABC transporter transmembrane region
ABC transporter
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
ATPase family associated with various cellular activities (AAA)
7.70E-60
2.10E-33
1.30E-04
2.00E-04
4.40E-04
WP_024030393.1 339602 337874 - 575PF00664
PF00005
PF02463
PF09818
PF13555
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
3.50E-49
2.10E-33
7.00E-06
4.40E-05
4.90E-04
WP_024030392.1 340187 339716 - 156PF01047
PF12802
PF01325
PF13463
PF13412
MarR
MarR_2
Fe_dep_repress
HTH_27
HTH_24
MarR family
MarR family
Iron dependent repressor, N-terminal DNA binding domain
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
7.80E-15
3.00E-13
1.80E-08
6.10E-08
6.10E-07
WP_024030391.1 341139 340359 - 259NO PFAM MATCH---